SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    341401 5el7:J5 (3.15) BS01 rna ? GO:0005840 ... P80339 26791911
    341402 5el7:J8 (3.15) BS01 rna ? GO:0005840 ... P60494 26791911
    341403 5el7:K8 (3.15) BS01 rna ? GO:0005840 ... Q5SHP6 26791911
    341404 5el7:L5 (3.15) BS01 rna ? GO:0005840 ... P80340 26791911
    341405 5el7:L8 (3.15) BS01 rna ? GO:0005840 ... Q5SHQ6 26791911
    341406 5el7:L8 (3.15) BS02 rna ? GO:0005840 ... Q5SHQ6 26791911
    341407 5el7:M5 (3.15) BS01 rna ? GO:0003735 ... Q5SKU1 26791911
    341408 5el7:M8 (3.15) BS01 rna ? GO:0005840 ... Q5SJE1 26791911
    341409 5el7:N8 (3.15) BS01 rna ? GO:0005840 ... P80339 26791911
    341410 5el7:P8 (3.15) BS01 rna ? GO:0005840 ... P80340 26791911
    341411 5el7:Q8 (3.15) BS01 rna ? GO:0003735 ... Q5SKU1 26791911
    341412 5el9:A (1.1) BS01 5DL 4.2.1.19 GO:0000105 ... O23346 27717128 MOAD: Ki=23nM
    341413 5elb:A (1.08) BS01 FUC ? GO:0005576 ... Q57193 27082955
    341414 5elb:A (1.08) BS02 GAL ? GO:0005576 ... Q57193 27082955
    341415 5elb:A (1.08) BS03 GLA ? GO:0005576 ... Q57193 27082955
    341416 5elb:B (1.08) BS01 FUC ? GO:0005576 ... Q57193 27082955
    341417 5elb:B (1.08) BS02 GAL ? GO:0005576 ... Q57193 27082955
    341418 5elb:B (1.08) BS03 GLA ? GO:0005576 ... Q57193 27082955
    341419 5elb:C (1.08) BS01 GAL ? GO:0005576 ... Q57193 27082955
    341420 5elb:C (1.08) BS02 FUC ? GO:0005576 ... Q57193 27082955
    341421 5elb:C (1.08) BS03 GAL ? GO:0005576 ... Q57193 27082955
    341422 5elb:C (1.08) BS04 GLA ? GO:0005576 ... Q57193 27082955
    341423 5elb:D (1.08) BS01 FUC ? GO:0005576 ... Q57193 27082955
    341424 5elb:D (1.08) BS02 GAL ? GO:0005576 ... Q57193 27082955
    341425 5elb:D (1.08) BS03 GLA ? GO:0005576 ... Q57193 27082955
    341426 5elb:E (1.08) BS01 FUC ? GO:0005576 ... Q57193 27082955
    341427 5elb:E (1.08) BS02 GAL ? GO:0005576 ... Q57193 27082955
    341428 5elb:E (1.08) BS03 GLA ? GO:0005576 ... Q57193 27082955
    341429 5elb:F (1.08) BS01 FUC ? GO:0005576 ... Q57193 27082955
    341430 5elb:F (1.08) BS02 GLA ? GO:0005576 ... Q57193 27082955
    341431 5elb:F (1.08) BS03 GAL ? GO:0005576 ... Q57193 27082955
    341432 5elb:G (1.08) BS01 FUC ? GO:0005576 ... Q57193 27082955
    341433 5elb:G (1.08) BS02 GLA ? GO:0005576 ... Q57193 27082955
    341434 5elb:G (1.08) BS03 GAL ? GO:0005576 ... Q57193 27082955
    341435 5elb:H (1.08) BS01 FUC ? GO:0005576 ... Q57193 27082955
    341436 5elb:H (1.08) BS02 GAL ? GO:0005576 ... Q57193 27082955
    341437 5elb:H (1.08) BS03 GLA ? GO:0005576 ... Q57193 27082955
    341438 5elb:I (1.08) BS01 FUC ? GO:0005576 ... Q57193 27082955
    341439 5elb:I (1.08) BS02 GAL ? GO:0005576 ... Q57193 27082955
    341440 5elb:I (1.08) BS03 GLA ? GO:0005576 ... Q57193 27082955
    341441 5elb:J (1.08) BS01 FUC ? GO:0005576 ... Q57193 27082955
    341442 5elb:J (1.08) BS02 GAL ? GO:0005576 ... Q57193 27082955
    341443 5elb:J (1.08) BS03 GLA ? GO:0005576 ... Q57193 27082955
    341444 5elc:A (1.5) BS01 FUC ? GO:0005515 ... P01556 27082955
    341445 5elc:B (1.5) BS01 GAL ? GO:0005515 ... P01556 27082955
    341446 5elc:B (1.5) BS02 FUC ? GO:0005515 ... P01556 27082955
    341447 5elc:C (1.5) BS01 FUC ? GO:0005515 ... P01556 27082955
    341448 5elc:C (1.5) BS02 FUC ? GO:0005515 ... P01556 27082955
    341449 5elc:D (1.5) BS01 FUC ? GO:0005515 ... P01556 27082955
    341450 5elc:D (1.5) BS02 FUC ? GO:0005515 ... P01556 27082955
    341451 5elc:E (1.5) BS01 GAL ? GO:0005515 ... P01556 27082955
    341452 5elc:E (1.5) BS02 FUC ? GO:0005515 ... P01556 27082955
    341453 5elc:E (1.5) BS03 FUC ? GO:0005515 ... P01556 27082955
    341454 5elc:F (1.5) BS01 FUC ? GO:0005515 ... P01556 27082955
    341455 5elc:G (1.5) BS01 FUC ? GO:0005515 ... P01556 27082955
    341456 5elc:H (1.5) BS01 FUC ? GO:0005515 ... P01556 27082955
    341457 5elc:H (1.5) BS02 FUC ? GO:0005515 ... P01556 27082955
    341458 5elc:I (1.5) BS01 FUC ? GO:0005515 ... P01556 27082955
    341459 5elc:J (1.5) BS01 FUC ? GO:0005515 ... P01556 27082955
    341460 5eld:A (1.4) BS01 FUC ? GO:0005576 ... D6R7L2 27082955
    341461 5eld:A (1.4) BS02 FUC ? GO:0005576 ... D6R7L2 27082955
    341462 5eld:A (1.4) BS03 GAL ? GO:0005576 ... D6R7L2 27082955
    341463 5eld:C (1.4) BS01 FUC ? GO:0005576 ... D6R7L2 27082955
    341464 5eld:C (1.4) BS02 GAL ? GO:0005576 ... D6R7L2 27082955
    341465 5eld:D (1.4) BS01 FUC ? GO:0005576 ... D6R7L2 27082955
    341466 5eld:D (1.4) BS02 FUC ? GO:0005576 ... D6R7L2 27082955
    341467 5eld:E (1.4) BS01 FUC ? GO:0005576 ... D6R7L2 27082955
    341468 5eld:E (1.4) BS02 FUC ? GO:0005576 ... D6R7L2 27082955
    341469 5eld:E (1.4) BS03 GAL ? GO:0005576 ... D6R7L2 27082955
    341470 5eld:E (1.4) BS04 GLA ? GO:0005576 ... D6R7L2 27082955
    341471 5ele:A (1.6) BS01 FUC ? GO:0005515 ... P01556 27082955
    341472 5ele:D (1.6) BS01 GAL ? GO:0005515 ... P01556 27082955
    341473 5ele:D (1.6) BS02 FUC ? GO:0005515 ... P01556 27082955
    341474 5ele:D (1.6) BS03 FUC ? GO:0005515 ... P01556 27082955
    341475 5ele:F (1.6) BS01 FUC ? GO:0005515 ... P01556 27082955
    341476 5ele:G (1.6) BS01 GAL ? GO:0005515 ... P01556 27082955
    341477 5ele:G (1.6) BS02 FUC ? GO:0005515 ... P01556 27082955
    341478 5ele:G (1.6) BS03 FUC ? GO:0005515 ... P01556 27082955
    341479 5ele:H (1.6) BS01 FUC ? GO:0005515 ... P01556 27082955
    341480 5ele:I (1.6) BS01 FUC ? GO:0005515 ... P01556 27082955
    341481 5ele:J (1.6) BS01 GAL ? GO:0005515 ... P01556 27082955
    341482 5ele:J (1.6) BS02 FUC ? GO:0005515 ... P01556 27082955
    341483 5ele:J (1.6) BS03 FUC ? GO:0005515 ... P01556 27082955
    341484 5elf:A (1.55) BS01 GLC ? GO:0005515 ... P01556 27082955
    341485 5elf:A (1.55) BS02 GAL ? GO:0005515 ... P01556 27082955
    341486 5elf:A (1.55) BS03 FUC ? GO:0005515 ... P01556 27082955
    341487 5elf:B (1.55) BS01 FUC ? GO:0005515 ... P01556 27082955
    341488 5elf:D (1.55) BS01 GAL ? GO:0005515 ... P01556 27082955
    341489 5elf:D (1.55) BS02 FUC ? GO:0005515 ... P01556 27082955
    341490 5elf:E (1.55) BS01 GLC ? GO:0005515 ... P01556 27082955
    341491 5elf:E (1.55) BS02 GAL ? GO:0005515 ... P01556 27082955
    341492 5elf:E (1.55) BS03 FUC ? GO:0005515 ... P01556 27082955
    341493 5elf:F (1.55) BS01 FUC ? GO:0005515 ... P01556 27082955
    341494 5elf:G (1.55) BS01 GAL ? GO:0005515 ... P01556 27082955
    341495 5elf:G (1.55) BS02 FUC ? GO:0005515 ... P01556 27082955
    341496 5elf:G (1.55) BS03 FUC ? GO:0005515 ... P01556 27082955
    341497 5elf:H (1.55) BS01 FUC ? GO:0005515 ... P01556 27082955
    341498 5elf:I (1.55) BS01 FUC ? GO:0005515 ... P01556 27082955
    341499 5elf:I (1.55) BS02 FUC ? GO:0005515 ... P01556 27082955
    341500 5elf:J (1.55) BS01 GAL ? GO:0005515 ... P01556 27082955
    341501 5elf:J (1.55) BS02 FUC ? GO:0005515 ... P01556 27082955
    341502 5elf:J (1.55) BS03 FUC ? GO:0005515 ... P01556 27082955
    341503 5elg:A (1.81) BS01 GSH 1.8.5.1
    2.5.1.18
    GO:0000325 ... Q9FWR4 N/A
    341504 5elh:A (1.8) BS01 ZN ? GO:0046872 ... Q8BL48 26641712
    341505 5elh:A (1.8) BS02 ZN ? GO:0046872 ... Q8BL48 26641712
    341506 5elh:A (1.8) BS03 ZN ? GO:0046872 ... Q8BL48 26641712
    341507 5elh:B (1.8) BS01 rna ? GO:0046872 ... Q8BL48 26641712
    341508 5elh:B (1.8) BS02 ZN ? GO:0046872 ... Q8BL48 26641712
    341509 5elh:B (1.8) BS03 ZN ? GO:0046872 ... Q8BL48 26641712
    341510 5elh:B (1.8) BS04 ZN ? GO:0046872 ... Q8BL48 26641712
    341511 5elk:A (2.3) BS01 rna ? GO:0046872 ... Q8BL48 26641712
    341512 5elk:A (2.3) BS02 ZN ? GO:0046872 ... Q8BL48 26641712
    341513 5elk:A (2.3) BS03 ZN ? GO:0046872 ... Q8BL48 26641712
    341514 5elk:A (2.3) BS04 ZN ? GO:0046872 ... Q8BL48 26641712
    341515 5elm:B (2.0) BS01 GLU 5.1.1.-
    5.1.1.10
    5.1.1.13
    GO:0016853 ... C3SWD2 26555188
    341516 5elm:C (2.0) BS01 GLU 5.1.1.-
    5.1.1.10
    5.1.1.13
    GO:0016853 ... C3SWD2 26555188
    341517 5elm:D (2.0) BS01 GLU 5.1.1.-
    5.1.1.10
    5.1.1.13
    GO:0016853 ... C3SWD2 26555188
    341518 5eln:A (1.9) BS01 LYS 6.1.1.6 GO:0000049 ... Q5CR27 30894487
    341519 5eln:B (1.9) BS01 LYS 6.1.1.6 GO:0000049 ... Q5CR27 30894487
    341520 5eln:C (1.9) BS01 LYS 6.1.1.6 GO:0000049 ... Q5CR27 30894487
    341521 5eln:D (1.9) BS01 LYS 6.1.1.6 GO:0000049 ... Q5CR27 30894487
    341522 5elo:A (1.9) BS01 LYS 6.1.1.6 GO:0000049 ... Q5CR27 30894487
    341523 5elo:A (1.9) BS02 KRS 6.1.1.6 GO:0000049 ... Q5CR27 30894487
    341524 5elo:B (1.9) BS01 LYS 6.1.1.6 GO:0000049 ... Q5CR27 30894487
    341525 5elo:B (1.9) BS02 KRS 6.1.1.6 GO:0000049 ... Q5CR27 30894487
    341526 5elo:C (1.9) BS01 LYS 6.1.1.6 GO:0000049 ... Q5CR27 30894487
    341527 5elo:C (1.9) BS02 KRS 6.1.1.6 GO:0000049 ... Q5CR27 30894487
    341528 5elo:D (1.9) BS01 LYS 6.1.1.6 GO:0000049 ... Q5CR27 30894487
    341529 5elo:D (1.9) BS02 KRS 6.1.1.6 GO:0000049 ... Q5CR27 30894487
    341530 5elq:A (1.1) BS01 peptide ? N/A Q8K4V4 27595347
    341531 5elq:B (1.1) BS01 peptide ? N/A Q8K4V4 27595347
    341532 5elr:C (2.3) BS01 rna ? GO:0003676 ... O75525 26758068
    341533 5els:A (2.873) BS01 rna ? GO:0003676 ... O75525 26758068
    341534 5els:A (2.873) BS02 rna ? GO:0003676 ... O75525 26758068
    341535 5els:C (2.873) BS01 rna ? GO:0003676 ... O75525 26758068
    341536 5els:C (2.873) BS02 rna ? GO:0003676 ... O75525 26758068
    341537 5elt:A (2.13) BS01 rna ? GO:0003676 ... O75525 26758068
    341538 5elt:B (2.13) BS01 rna ? GO:0003676 ... O75525 26758068
    341539 5elv:A (1.92) BS01 5PX ? GO:0015276 ... P19491 27276258 MOAD: Kd=0.16uM
    341540 5elv:A (1.92) BS02 GLU ? GO:0015276 ... P19491 27276258
    341541 5elv:A (1.92) BS03 5PX ? GO:0015276 ... P19491 27276258 MOAD: Kd=0.16uM
    341542 5elv:B (1.92) BS01 5PX ? GO:0015276 ... P19491 27276258 MOAD: Kd=0.16uM
    341543 5elv:B (1.92) BS02 5PX ? GO:0015276 ... P19491 27276258 MOAD: Kd=0.16uM
    341544 5elv:B (1.92) BS03 GLU ? GO:0015276 ... P19491 27276258
    341545 5elw:A (1.4) BS01 5LD 4.2.1.19 GO:0000105 ... O23346 27717128 MOAD: Ki=15nM
    341546 5elx:A (1.81) BS01 rna 3.6.4.13 GO:0003676 ... P20449 26730886
    341547 5elx:A (1.81) BS02 M2A 3.6.4.13 GO:0003676 ... P20449 26730886
    341548 5elx:A (1.81) BS03 BEF 3.6.4.13 GO:0003676 ... P20449 26730886
    341549 5ely:A (1.81) BS01 ZN 3.4.17.21 GO:0004180 ... Q04609 27074627
    341550 5ely:A (1.81) BS02 ZN 3.4.17.21 GO:0004180 ... Q04609 27074627
    341551 5ely:A (1.81) BS03 CA 3.4.17.21 GO:0004180 ... Q04609 27074627
    341552 5ely:A (1.81) BS04 5PU 3.4.17.21 GO:0004180 ... Q04609 27074627 MOAD: ic50=44nM
    BindingDB: IC50=44nM
    341553 5elz:A (1.8) BS01 ADP 2.7.1.33 GO:0004594 ... Q2FWC7 27759386
    341554 5elz:A (1.8) BS02 3V9 2.7.1.33 GO:0004594 ... Q2FWC7 27759386
    341555 5em3:A (1.4) BS01 5Q0 ? N/A P55201 27167503 BindingDB: Kd=>200000nM
    341556 5em3:A (1.4) BS02 5Q0 ? N/A P55201 27167503 BindingDB: Kd=>200000nM
    341557 5em4:A (3.02) BS01 HEM 1.14.14.1 GO:0004497 ... P00178 26982502
    341558 5em4:A (3.02) BS02 CM5 1.14.14.1 GO:0004497 ... P00178 26982502
    341559 5em4:A (3.02) BS03 CM5 1.14.14.1 GO:0004497 ... P00178 26982502
    341560 5em4:B (3.02) BS01 HEM 1.14.14.1 GO:0004497 ... P00178 26982502
    341561 5em4:B (3.02) BS02 CM5 1.14.14.1 GO:0004497 ... P00178 26982502
    341562 5em4:B (3.02) BS03 CM5 1.14.14.1 GO:0004497 ... P00178 26982502
    341563 5em5:A (2.65) BS01 5Q2 2.7.10.1 GO:0004672 ... P00533 26819674 BindingDB: Ki=37nM
    341564 5em6:A (2.78) BS01 5Q3 2.7.10.1 GO:0004672 ... P00533 26819674 BindingDB: Ki=850nM
    341565 5em7:A (2.81) BS01 5Q4 2.7.10.1 GO:0004672 ... P00533 26819674 BindingDB: Ki=1090nM
    341566 5em8:A (2.8) BS01 5Q4 2.7.10.1 GO:0004672 ... P00533 26819674 BindingDB: Ki=1090nM
    341567 5em9:A (1.6) BS01 peptide ? N/A Q8K4V4 27595347
    341568 5ema:A (1.32) BS01 peptide ? N/A Q8K4V4 27595347
    341569 5emb:A (0.85) BS01 peptide ? N/A Q8K4V4 27595347
    341570 5emc:A (2.3) BS01 dna ? GO:0003700 ... P04150 N/A
    341571 5emc:A (2.3) BS02 dna ? GO:0003700 ... P04150 N/A
    341572 5emc:A (2.3) BS03 ZN ? GO:0003700 ... P04150 N/A
    341573 5emc:A (2.3) BS04 ZN ? GO:0003700 ... P04150 N/A
    341574 5emc:B (2.3) BS01 dna ? GO:0003700 ... P04150 N/A
    341575 5emc:B (2.3) BS02 dna ? GO:0003700 ... P04150 N/A
    341576 5emc:B (2.3) BS03 ZN ? GO:0003700 ... P04150 N/A
    341577 5emc:B (2.3) BS04 ZN ? GO:0003700 ... P04150 N/A
    341578 5emh:A (2.1) BS01 NAP 1.3.1.122 GO:0005737 ... K7WDL7 29944733
    341579 5emi:A (1.12) BS01 ZN 3.5.1.28 GO:0008745 ... B2J2S4 26833702
    341580 5emj:A (2.273) BS01 SFG 2.1.1.320 GO:0000387 ... O14744 26985292 BindingDB: IC50=8600nM
    341581 5emj:A (2.273) BS02 5QJ 2.1.1.320 GO:0000387 ... O14744 26985292 MOAD: ic50=33nM
    BindingDB: IC50=<100nM
    341582 5emk:A (2.52) BS01 SFG 2.1.1.320 GO:0000387 ... O14744 26985292 BindingDB: IC50=8600nM
    341583 5emk:A (2.52) BS02 5QH 2.1.1.320 GO:0000387 ... O14744 26985292 BindingDB: IC50=<100nM
    341584 5eml:A (2.39) BS01 SAM 2.1.1.320 GO:0000387 ... O14744 26985292
    341585 5eml:A (2.39) BS02 5QK 2.1.1.320 GO:0000387 ... O14744 26985292 MOAD: ic50=23nM
    BindingDB: IC50=<100nM
    341586 5emm:A (2.37) BS01 SFG 2.1.1.320 GO:0000387 ... O14744 26985292 BindingDB: IC50=8600nM
    341587 5emm:A (2.37) BS02 5QL 2.1.1.320 GO:0000387 ... O14744 26985292 BindingDB: IC50=<100nM
    341588 5emn:A (2.2) BS01 FMN 1.6.2.4 GO:0003958 ... P16435 27496950
    341589 5emn:A (2.2) BS02 FAD 1.6.2.4 GO:0003958 ... P16435 27496950
    341590 5emn:A (2.2) BS03 NAP 1.6.2.4 GO:0003958 ... P16435 27496950
    341591 5emn:B (2.2) BS01 FMN 1.6.2.4 GO:0003958 ... P16435 27496950
    341592 5emn:B (2.2) BS02 FAD 1.6.2.4 GO:0003958 ... P16435 27496950
    341593 5emn:B (2.2) BS03 NAP 1.6.2.4 GO:0003958 ... P16435 27496950
    341594 5emo:A (3.03) BS01 rna ? GO:0003676 ... O75525 26758068
    341595 5emo:B (3.03) BS01 rna ? GO:0003676 ... O75525 26758068
    341596 5emp:A (2.3) BS01 dna ? GO:0003700 ... P04150 N/A
    341597 5emp:A (2.3) BS02 dna ? GO:0003700 ... P04150 N/A
    341598 5emp:A (2.3) BS03 ZN ? GO:0003700 ... P04150 N/A
    341599 5emp:A (2.3) BS04 ZN ? GO:0003700 ... P04150 N/A
    341600 5emp:B (2.3) BS01 dna ? GO:0003700 ... P04150 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).