SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    341601 5emp:B (2.3) BS02 dna ? GO:0003700 ... P04150 N/A
    341602 5emp:B (2.3) BS03 ZN ? GO:0003700 ... P04150 N/A
    341603 5emp:B (2.3) BS04 ZN ? GO:0003700 ... P04150 N/A
    341604 5emq:A (2.3) BS01 dna ? GO:0003700 ... P04150 N/A
    341605 5emq:A (2.3) BS02 dna ? GO:0003700 ... P04150 N/A
    341606 5emq:A (2.3) BS03 ZN ? GO:0003700 ... P04150 N/A
    341607 5emq:A (2.3) BS04 ZN ? GO:0003700 ... P04150 N/A
    341608 5emq:B (2.3) BS01 dna ? GO:0003700 ... P04150 N/A
    341609 5emq:B (2.3) BS02 dna ? GO:0003700 ... P04150 N/A
    341610 5emq:B (2.3) BS03 ZN ? GO:0003700 ... P04150 N/A
    341611 5emq:B (2.3) BS04 ZN ? GO:0003700 ... P04150 N/A
    341612 5emt:A (1.5) BS01 CU 3.4.22.-
    3.9.1.-
    GO:0000118 ... P49773 28739258
    341613 5emt:A (1.5) BS02 CU 3.4.22.-
    3.9.1.-
    GO:0000118 ... P49773 28739258
    341614 5emt:B (1.5) BS01 CU 3.4.22.-
    3.9.1.-
    GO:0000118 ... P49773 28739258
    341615 5emu:A (1.5) BS01 1BO 4.1.2.4 GO:0003824 ... P0A6L0 30155096
    341616 5emy:A (1.231) BS01 5QP 3.2.1.1 GO:0003824 ... P04746 27000970
    341617 5emy:A (1.231) BS02 CA 3.2.1.1 GO:0003824 ... P04746 27000970
    341618 5en0:A (2.81) BS01 peptide ? GO:0000139 ... P02699 27458239
    341619 5en0:A (2.81) BS02 RET ? GO:0000139 ... P02699 27458239
    341620 5en1:A (2.58) BS01 rna ? GO:0003676 ... P22626 N/A
    341621 5en3:A (1.25) BS01 7LU ? GO:0001523 ... P02766 27050398 MOAD: Kd=620nM
    341622 5en3:B (1.25) BS01 7LU ? GO:0001523 ... P02766 27050398 MOAD: Kd=620nM
    341623 5en4:A (1.52) BS01 NAD 1.1.1.62 GO:0004303 ... Q9BPX1 27933965
    341624 5en4:A (1.52) BS02 5Q6 1.1.1.62 GO:0004303 ... Q9BPX1 27933965 MOAD: Ki=64nM
    BindingDB: Ki=64nM
    341625 5en6:A (3.103) BS01 peptide ? GO:0000398 ... G5EEG7 N/A
    341626 5en7:A (2.936) BS01 peptide ? GO:0000398 ... G5EEG7 N/A
    341627 5en7:C (2.936) BS01 peptide ? GO:0000398 ... G5EEG7 N/A
    341628 5en7:E (2.936) BS01 peptide ? GO:0000398 ... G5EEG7 N/A
    341629 5en7:G (2.936) BS01 peptide ? GO:0000398 ... G5EEG7 N/A
    341630 5en9:B (1.5) BS01 peptide ? GO:0005179 ... P01308 26707939
    341631 5ena:B (1.35) BS01 peptide ? GO:0005179 ... P01308 26707939
    341632 5enb:A (1.73) BS01 5Q5 ? N/A Q8WWQ0 29910922
    341633 5enc:A (1.59) BS01 5QD ? N/A Q8WWQ0 29910922
    341634 5ene:A (1.49) BS01 5Q8 ? N/A Q8WWQ0 29910922
    341635 5enf:A (1.37) BS01 5Q7 ? N/A Q8WWQ0 29910922
    341636 5eng:A (1.3) BS01 5QN 2.3.1.-
    2.3.1.48
    N/A Q92793 30258543
    341637 5enh:A (1.95) BS01 5QB ? N/A Q8WWQ0 29910922
    341638 5eni:A (1.69) BS01 5QA ? N/A Q8WWQ0 29910922
    341639 5enj:A (1.63) BS01 5Q9 ? N/A Q8WWQ0 29910922
    341640 5enk:A (2.11) BS01 5QV 3.4.23.46 GO:0004190 ... P56817 26985314 MOAD: ic50=8nM
    BindingDB: IC50=8.0nM
    341641 5enl:A (2.2) BS01 CA 4.2.1.11 GO:0000015 ... P00924 2007121
    341642 5enl:A (2.2) BS02 2PG 4.2.1.11 GO:0000015 ... P00924 2007121
    341643 5enm:A (1.98) BS01 5QU 3.4.23.46 GO:0004190 ... P56817 26985314 MOAD: ic50=70nM
    341644 5enn:A (2.7) BS01 5QS 2.7.1.137 GO:0016301 ... Q8NEB9 N/A BindingDB: IC50=25nM
    341645 5enn:B (2.7) BS01 5QS 2.7.1.137 GO:0016301 ... Q8NEB9 N/A BindingDB: IC50=25nM
    341646 5eno:C (2.2) BS01 5QG ? N/A P31224 26976576
    341647 5enp:C (1.9) BS01 5QF ? GO:0016020 ... P31224 26976576
    341648 5enq:C (1.8) BS01 5QE ? N/A P31224 26976576
    341649 5enr:C (2.3) BS01 MBX ? GO:0016020 ... P31224 26976576
    341650 5ens:C (2.8) BS01 RHQ ? GO:0016020 ... P31224 26976576
    341651 5ent:C (2.5) BS01 MIY ? GO:0016020 ... P31224 26976576
    341652 5env:A (3.0) BS01 ZN 1.1.1.1
    1.1.1.54
    1.1.1.78
    GO:0000947 ... P00330 26743849
    341653 5env:A (3.0) BS02 ZN 1.1.1.1
    1.1.1.54
    1.1.1.78
    GO:0000947 ... P00330 26743849
    341654 5env:A (3.0) BS03 NAD 1.1.1.1
    1.1.1.54
    1.1.1.78
    GO:0000947 ... P00330 26743849
    341655 5env:A (3.0) BS04 ETF 1.1.1.1
    1.1.1.54
    1.1.1.78
    GO:0000947 ... P00330 26743849
    341656 5env:B (3.0) BS01 ZN 1.1.1.1
    1.1.1.54
    1.1.1.78
    GO:0000947 ... P00330 26743849
    341657 5env:B (3.0) BS02 ZN 1.1.1.1
    1.1.1.54
    1.1.1.78
    GO:0000947 ... P00330 26743849
    341658 5env:B (3.0) BS03 NAD 1.1.1.1
    1.1.1.54
    1.1.1.78
    GO:0000947 ... P00330 26743849
    341659 5env:B (3.0) BS04 ETF 1.1.1.1
    1.1.1.54
    1.1.1.78
    GO:0000947 ... P00330 26743849
    341660 5enw:A (1.85) BS01 peptide ? N/A P04439 28179428
    341661 5enz:A (1.91) BS01 UDP 5.1.3.14 GO:0000166 ... Q9REV4 27144276
    341662 5enz:B (1.91) BS01 UDP 5.1.3.14 GO:0000166 ... Q9REV4 27144276
    341663 5eo0:A (1.7) BS01 peptide ? N/A P01889 26983786
    341664 5eo1:A (1.85) BS01 peptide ? N/A P01889 26983786
    341665 5eo2:A (2.5) BS01 COA ? N/A A0A0H3JSY9 N/A
    341666 5eo2:A (2.5) BS02 COA ? N/A A0A0H3JSY9 N/A
    341667 5eo2:B (2.5) BS01 COA ? N/A A0A0H3JSY9 N/A
    341668 5eo2:B (2.5) BS02 COA ? N/A A0A0H3JSY9 N/A
    341669 5eo2:C (2.5) BS01 COA ? N/A A0A0H3JSY9 N/A
    341670 5eo2:C (2.5) BS02 COA ? N/A A0A0H3JSY9 N/A
    341671 5eo2:D (2.5) BS01 COA ? N/A A0A0H3JSY9 N/A
    341672 5eo2:D (2.5) BS02 COA ? N/A A0A0H3JSY9 N/A
    341673 5eo2:E (2.5) BS01 COA ? N/A A0A0H3JSY9 N/A
    341674 5eo2:E (2.5) BS02 COA ? N/A A0A0H3JSY9 N/A
    341675 5eo2:F (2.5) BS01 COA ? N/A A0A0H3JSY9 N/A
    341676 5eo2:F (2.5) BS02 COA ? N/A A0A0H3JSY9 N/A
    341677 5eo7:A (2.3) BS01 SFU ? GO:0005769 ... Q2UNX8 27318092
    341678 5eo7:A (2.3) BS02 SFU ? GO:0005769 ... Q2UNX8 27318092
    341679 5eo7:A (2.3) BS03 SFU ? GO:0005769 ... Q2UNX8 27318092
    341680 5eo7:A (2.3) BS04 SFU ? GO:0005769 ... Q2UNX8 27318092
    341681 5eo7:A (2.3) BS05 SFU ? GO:0005769 ... Q2UNX8 27318092
    341682 5eo7:B (2.3) BS01 SFU ? GO:0005769 ... Q2UNX8 27318092
    341683 5eo7:B (2.3) BS02 SFU ? GO:0005769 ... Q2UNX8 27318092
    341684 5eo7:B (2.3) BS03 SFU ? GO:0005769 ... Q2UNX8 27318092
    341685 5eo7:B (2.3) BS04 SFU ? GO:0005769 ... Q2UNX8 27318092
    341686 5eo7:B (2.3) BS05 SFU ? GO:0005769 ... Q2UNX8 27318092
    341687 5eo7:C (2.3) BS01 SFU ? GO:0005769 ... Q2UNX8 27318092
    341688 5eo7:C (2.3) BS02 SFU ? GO:0005769 ... Q2UNX8 27318092
    341689 5eo7:C (2.3) BS03 SFU ? GO:0005769 ... Q2UNX8 27318092
    341690 5eo7:C (2.3) BS04 SFU ? GO:0005769 ... Q2UNX8 27318092
    341691 5eo7:C (2.3) BS05 SFU ? GO:0005769 ... Q2UNX8 27318092
    341692 5eo8:A (1.6) BS01 TFU ? GO:0005769 ... Q2UNX8 27318092
    341693 5eo8:A (1.6) BS02 TFU ? GO:0005769 ... Q2UNX8 27318092
    341694 5eo8:A (1.6) BS03 TFU ? GO:0005769 ... Q2UNX8 27318092
    341695 5eo8:A (1.6) BS04 TFU ? GO:0005769 ... Q2UNX8 27318092
    341696 5eo8:A (1.6) BS05 TFU ? GO:0005769 ... Q2UNX8 27318092
    341697 5eo8:A (1.6) BS06 TFU ? GO:0005769 ... Q2UNX8 27318092
    341698 5eob:A (1.75) BS01 5QQ 2.7.10.1 GO:0004672 ... P08581 27061987 MOAD: ic50=0.24nM
    BindingDB: IC50=0.850000nM
    341699 5eoc:H (1.98) BS01 peptide N/A N/A N/A 26819303
    341700 5eoc:J (1.98) BS01 peptide N/A N/A N/A 26819303
    341701 5eoc:L (1.98) BS01 peptide N/A N/A N/A 26819303
    341702 5eoc:M (1.98) BS01 peptide N/A N/A N/A 26819303
    341703 5eod:A (3.1) BS01 peptide 3.4.21.27 GO:0004252 ... P03951 27006387
    341704 5eoh:A (1.9) BS01 HEM 1.7.-.- GO:0005092 ... Q9ER97 28500341
    341705 5eoi:A (1.8) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    341706 5eoi:A (1.8) BS02 CU 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    341707 5eok:A (2.8) BS01 peptide 3.4.21.27 GO:0004252 ... P03951 27006387
    341708 5eok:A (2.8) BS02 FUC 3.4.21.27 GO:0004252 ... P03951 27006387
    341709 5eol:A (2.2) BS01 5QO 2.7.11.1 GO:0004672 ... P11309 27096050 MOAD: ic50=0.3nM
    BindingDB: IC50=0.300000nM
    341710 5eom:A (2.55) BS01 CTP 2.7.7.- GO:0001654 ... Q13394 27271801
    341711 5eom:B (2.55) BS01 CTP 2.7.7.- GO:0001654 ... Q13394 27271801
    341712 5eom:C (2.55) BS01 TMO 2.7.7.- GO:0001654 ... Q13394 27271801
    341713 5eom:C (2.55) BS02 CTP 2.7.7.- GO:0001654 ... Q13394 27271801
    341714 5eom:D (2.55) BS01 CTP 2.7.7.- GO:0001654 ... Q13394 27271801
    341715 5eom:E (2.55) BS01 CTP 2.7.7.- GO:0001654 ... Q13394 27271801
    341716 5eom:F (2.55) BS01 TMO 2.7.7.- GO:0001654 ... Q13394 27271801
    341717 5eom:F (2.55) BS02 CTP 2.7.7.- GO:0001654 ... Q13394 27271801
    341718 5eom:G (2.55) BS01 CTP 2.7.7.- GO:0001654 ... Q13394 27271801
    341719 5eom:H (2.55) BS01 CTP 2.7.7.- GO:0001654 ... Q13394 27271801
    341720 5eom:I (2.55) BS01 CTP 2.7.7.- GO:0001654 ... Q13394 27271801
    341721 5eom:J (2.55) BS01 CTP 2.7.7.- GO:0001654 ... Q13394 27271801
    341722 5eoq:H (1.95) BS01 peptide N/A N/A N/A 26889021
    341723 5eoq:L (1.95) BS01 peptide N/A N/A N/A 26889021
    341724 5eor:H (2.27) BS01 peptide N/A N/A N/A 26889021
    341725 5eor:L (2.27) BS01 peptide N/A N/A N/A 26889021
    341726 5eot:A (2.1) BS01 peptide ? N/A P04439 28179428
    341727 5eou:B (2.4) BS01 ATP ? GO:0005524 ... G3XD28
    G3XD30
    27022027 MOAD: Kd=4.37uM
    341728 5eow:A (2.1) BS01 FAD 1.14.13.114 GO:0071949 ... Q88FY2 27218267
    341729 5eox:A (2.4) BS01 ADP ? GO:0005524 ... G3XD28 27022027
    341730 5eox:B (2.4) BS01 ADP ? GO:0005524 ... G3XD28 27022027
    341731 5eoy:A (2.5) BS01 ADP ? GO:0005524 ... G3XD28 27022027
    341732 5eoy:A (2.5) BS02 MG ? GO:0005524 ... G3XD28 27022027
    341733 5eoy:B (2.5) BS01 ADP ? GO:0005524 ... G3XD28 27022027
    341734 5eoz:A (2.088) BS01 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0001701 ... P06746 29957995
    341735 5eoz:A (2.088) BS02 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0001701 ... P06746 29957995
    341736 5eoz:A (2.088) BS03 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0001701 ... P06746 29957995
    341737 5eoz:A (2.088) BS04 MG 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0001701 ... P06746 29957995
    341738 5eoz:A (2.088) BS05 MG 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0001701 ... P06746 29957995
    341739 5eoz:A (2.088) BS06 0KX 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0001701 ... P06746 29957995
    341740 5ep2:A (1.421) BS01 AZU ? GO:0005524 ... Q1ZS18 27219477
    341741 5ep3:A (1.8) BS01 5QT ? GO:0005524 ... Q1ZS18 27219477
    341742 5ep4:A (1.5) BS01 ATP ? GO:0005524 ... Q1ZS18 27219477
    341743 5ep7:A (1.198) BS01 5QR 2.3.1.-
    2.3.1.48
    N/A Q92793 30258543 BindingDB: Kd=4000nM
    341744 5ep9:A (2.13) BS01 AKG ? GO:0046872 ... Q9EYI0
    Q9RN67
    27114534
    341745 5ep9:A (2.13) BS02 FE ? GO:0046872 ... Q9EYI0
    Q9RN67
    27114534
    341746 5ep9:B (2.13) BS01 AKG ? GO:0046872 ... Q9EYI0
    Q9RN67
    27114534
    341747 5ep9:B (2.13) BS02 FE ? GO:0046872 ... Q9EYI0
    Q9RN67
    27114534
    341748 5ep9:C (2.13) BS01 AKG ? GO:0046872 ... Q9EYI0
    Q9RN67
    27114534
    341749 5ep9:C (2.13) BS02 FE ? GO:0046872 ... Q9EYI0
    Q9RN67
    27114534
    341750 5ep9:D (2.13) BS01 AKG ? GO:0046872 ... Q9EYI0
    Q9RN67
    27114534
    341751 5ep9:D (2.13) BS02 FE ? GO:0046872 ... Q9EYI0
    Q9RN67
    27114534
    341752 5epa:A (2.24) BS01 FE ? GO:0016491 ... Q9RN60 27114534
    341753 5epa:A (2.24) BS02 AKG ? GO:0016491 ... Q9RN60 27114534
    341754 5epa:B (2.24) BS01 FE ? GO:0016491 ... Q9RN60 27114534
    341755 5epa:B (2.24) BS02 AKG ? GO:0016491 ... Q9RN60 27114534
    341756 5epa:C (2.24) BS01 FE ? GO:0016491 ... Q9RN60 27114534
    341757 5epa:C (2.24) BS02 AKG ? GO:0016491 ... Q9RN60 27114534
    341758 5epa:D (2.24) BS01 FE ? GO:0016491 ... Q9RN60 27114534
    341759 5epa:D (2.24) BS02 AKG ? GO:0016491 ... Q9RN60 27114534
    341760 5epa:E (2.24) BS01 FE ? GO:0016491 ... Q9RN60 27114534
    341761 5epa:E (2.24) BS02 AKG ? GO:0016491 ... Q9RN60 27114534
    341762 5epa:F (2.24) BS01 FE ? GO:0016491 ... Q9RN60 27114534
    341763 5epa:F (2.24) BS02 AKG ? GO:0016491 ... Q9RN60 27114534
    341764 5epb:A (1.5) BS01 5QW 3.6.1.- N/A Q6PL18 N/A
    341765 5epb:A (1.5) BS02 5QW 3.6.1.- N/A Q6PL18 N/A
    341766 5epc:A (1.85) BS01 MG 5.4.2.2 GO:0000287 ... P36871 26972339
    341767 5epc:B (1.85) BS01 MG 5.4.2.2 GO:0000287 ... P36871 26972339
    341768 5epe:A (1.9) BS01 SAH 2.1.1.- GO:0008168 ... Q3SJX0 N/A
    341769 5epg:A (3.39) BS01 FES 1.17.3.-
    1.2.3.1
    GO:0004031 ... Q06278 26842593
    341770 5epg:A (3.39) BS02 FES 1.17.3.-
    1.2.3.1
    GO:0004031 ... Q06278 26842593
    341771 5epg:A (3.39) BS03 FAD 1.17.3.-
    1.2.3.1
    GO:0004031 ... Q06278 26842593
    341772 5eph:A (1.79) BS01 ID1 3.5.2.6 GO:0008800 ... Q3SAW3 27671060
    341773 5eph:B (1.79) BS01 ID1 3.5.2.6 GO:0008800 ... Q3SAW3 27671060
    341774 5eph:C (1.79) BS01 ID1 3.5.2.6 GO:0008800 ... Q3SAW3 27671060
    341775 5eph:D (1.79) BS01 ID1 3.5.2.6 GO:0008800 ... Q3SAW3 27671060
    341776 5epi:A (4.1) BS01 rna 3.1.-.- GO:0003723 ... Q5V8Z9 26711008
    341777 5epi:B (4.1) BS01 rna 2.7.7.48 GO:0000166 ... Q5V8Y6 26711008
    341778 5epi:E (4.1) BS01 rna 3.1.-.- GO:0003723 ... Q5V8Z9 26711008
    341779 5epi:F (4.1) BS01 rna 2.7.7.48 GO:0000166 ... Q5V8Y6 26711008
    341780 5epi:I (4.1) BS01 rna 3.1.-.- GO:0003723 ... Q5V8Z9 26711008
    341781 5epi:J (4.1) BS01 rna 2.7.7.48 GO:0000166 ... Q5V8Y6 26711008
    341782 5epi:M (4.1) BS01 rna 3.1.-.- GO:0003723 ... Q5V8Z9 26711008
    341783 5epi:N (4.1) BS01 rna 2.7.7.48 GO:0000166 ... Q5V8Y6 26711008
    341784 5epi:Q (4.1) BS01 rna 3.1.-.- GO:0003723 ... Q5V8Z9 26711008
    341785 5epi:R (4.1) BS01 rna 2.7.7.48 GO:0000166 ... Q5V8Y6 26711008
    341786 5epi:U (4.1) BS01 rna 3.1.-.- GO:0003723 ... Q5V8Z9 26711008
    341787 5epi:V (4.1) BS01 rna 2.7.7.48 GO:0000166 ... Q5V8Y6 26711008
    341788 5epj:A (1.6) BS01 peptide ? GO:0035102 ... O95931 N/A
    341789 5epk:A (1.8) BS01 peptide ? GO:0035102 ... Q14781 26807715
    341790 5epl:A (1.81) BS01 peptide 2.3.2.- GO:0045892 ... O00257 26807715
    341791 5epl:A (1.81) BS02 peptide 2.3.2.- GO:0045892 ... O00257 26807715
    341792 5epl:B (1.81) BS01 peptide 2.3.2.- GO:0045892 ... O00257 26807715
    341793 5epl:B (1.81) BS02 peptide 2.3.2.- GO:0045892 ... O00257 26807715
    341794 5epn:A (2.3) BS01 ZN 3.6.4.13 GO:0006508 ... C1KIK8 26682473
    341795 5epn:A (2.3) BS02 5R2 3.6.4.13 GO:0006508 ... C1KIK8 26682473 MOAD: Kd=2.2nM
    341796 5epo:A (2.0) BS01 NAP 1.1.1.- GO:0000166 ... G9FRD7 26961171
    341797 5epo:A (2.0) BS02 TUD 1.1.1.- GO:0000166 ... G9FRD7 26961171
    341798 5epo:B (2.0) BS01 NAP 1.1.1.- GO:0000166 ... G9FRD7 26961171
    341799 5epo:B (2.0) BS02 TUD 1.1.1.- GO:0000166 ... G9FRD7 26961171
    341800 5epo:C (2.0) BS01 NAP 1.1.1.- GO:0000166 ... G9FRD7 26961171

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).