SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    342801 5eyn:A (1.289) BS02 BEF 2.7.1.4 GO:0000166 ... A0A0H3AER7 N/A
    342802 5eyn:A (1.289) BS03 ADP 2.7.1.4 GO:0000166 ... A0A0H3AER7 N/A
    342803 5eyo:A (2.39) BS01 dna ? GO:0046983 ... P61244 27903915
    342804 5eyo:C (2.39) BS01 dna ? GO:0046983 ... P61244 27903915
    342805 5eyp:A (1.9) BS01 GTP ? GO:0000226 ... D0VWZ0 27380724
    342806 5eyp:A (1.9) BS02 LOC ? GO:0000226 ... D0VWZ0 27380724
    342807 5eyp:B (1.9) BS01 GDP ? GO:0003924 ... D0VWY9 27380724
    342808 5eyp:B (1.9) BS02 LOC ? GO:0003924 ... D0VWY9 27380724
    342809 5eyr:A (1.57) BS01 5T0 ? GO:0000976 ... P9WMC1 26806381 MOAD: Kd=5uM
    342810 5eys:A (1.75) BS01 HEM 1.7.-.- GO:0005092 ... Q9ER97 28500341
    342811 5eyt:A (2.3649) BS01 AMP 4.3.2.2 GO:0000166 ... G4VQX9 28347672
    342812 5eyu:A (1.72) BS01 NAD 1.2.1.8 GO:0000166 ... Q9L4P8 N/A
    342813 5eyu:B (1.72) BS01 NAD 1.2.1.8 GO:0000166 ... Q9L4P8 N/A
    342814 5eyu:C (1.72) BS01 NAD 1.2.1.8 GO:0000166 ... Q9L4P8 N/A
    342815 5eyu:D (1.72) BS01 NAD 1.2.1.8 GO:0000166 ... Q9L4P8 N/A
    342816 5eyw:A (1.7) BS01 PGA 5.3.1.1 GO:0004807 ... K0E682 27614148
    342817 5eyw:B (1.7) BS01 PGA 5.3.1.1 GO:0004807 ... K0E682 27614148
    342818 5eyx:A (2.25) BS01 MMA ? GO:0005537 ... C0HJX1 26946944
    342819 5eyx:A (2.25) BS02 MAN ? GO:0005537 ... C0HJX1 26946944
    342820 5eyx:A (2.25) BS03 CA ? GO:0005537 ... C0HJX1 26946944
    342821 5eyx:A (2.25) BS04 MN ? GO:0005537 ... C0HJX1 26946944
    342822 5eyx:B (2.25) BS01 MMA ? GO:0005537 ... C0HJX1 26946944
    342823 5eyx:B (2.25) BS02 MAN ? GO:0005537 ... C0HJX1 26946944
    342824 5eyx:B (2.25) BS03 CA ? GO:0005537 ... C0HJX1 26946944
    342825 5eyx:B (2.25) BS04 MN ? GO:0005537 ... C0HJX1 26946944
    342826 5eyy:A (1.902) BS01 MMA ? GO:0005537 ... C0HJX1 26946944
    342827 5eyy:A (1.902) BS02 MAN ? GO:0005537 ... C0HJX1 26946944
    342828 5eyy:A (1.902) BS03 CA ? GO:0005537 ... C0HJX1 26946944
    342829 5eyy:A (1.902) BS04 MN ? GO:0005537 ... C0HJX1 26946944
    342830 5eyz:A (2.09) BS01 peptide 3.1.3.48 N/A P29074 27246854
    342831 5eyz:B (2.09) BS01 peptide 3.1.3.48 N/A P29074 27246854
    342832 5eyz:C (2.09) BS01 peptide 3.1.3.48 N/A P29074 27246854
    342833 5eyz:D (2.09) BS01 peptide 3.1.3.48 N/A P29074 27246854
    342834 5ez0:A (2.35) BS01 peptide 3.1.3.48 N/A P29074 27246854
    342835 5ez0:A (2.35) BS02 peptide 3.1.3.48 N/A P29074 27246854
    342836 5ez0:B (2.35) BS01 peptide 3.1.3.48 N/A P29074 27246854
    342837 5ez0:C (2.35) BS01 peptide 3.1.3.48 N/A P29074 27246854
    342838 5ez0:C (2.35) BS02 peptide 3.1.3.48 N/A P29074 27246854
    342839 5ez0:D (2.35) BS01 peptide 3.1.3.48 N/A P29074 27246854
    342840 5ez1:A (2.4) BS01 ICB 5.2.1.8 GO:0003755 ... P56112 26850168
    342841 5ez1:B (2.4) BS01 ICB 5.2.1.8 GO:0003755 ... P56112 26850168
    342842 5ez2:A (1.849) BS01 BLA ? GO:0000302 ... A0A1D5B367 27688756
    342843 5ez2:B (1.849) BS01 BLA ? GO:0000302 ... A0A1D5B367 27688756
    342844 5ez3:A (2.15) BS01 FAD 1.3.8.- GO:0000166 ... Q8YC61 N/A
    342845 5ez3:A (2.15) BS02 FAD 1.3.8.- GO:0000166 ... Q8YC61 N/A
    342846 5ez3:B (2.15) BS01 FAD 1.3.8.- GO:0000166 ... Q8YC61 N/A
    342847 5ez3:B (2.15) BS02 FAD 1.3.8.- GO:0000166 ... Q8YC61 N/A
    342848 5ez3:C (2.15) BS01 FAD 1.3.8.- GO:0000166 ... Q8YC61 N/A
    342849 5ez3:C (2.15) BS02 FAD 1.3.8.- GO:0000166 ... Q8YC61 N/A
    342850 5ez3:D (2.15) BS01 FAD 1.3.8.- GO:0000166 ... Q8YC61 N/A
    342851 5ez3:D (2.15) BS02 FAD 1.3.8.- GO:0000166 ... Q8YC61 N/A
    342852 5ez4:A (2.11) BS01 NAD 1.2.1.8 GO:0000166 ... Q9L4P8 N/A
    342853 5ez4:B (2.11) BS01 NAD 1.2.1.8 GO:0000166 ... Q9L4P8 N/A
    342854 5ez4:C (2.11) BS01 NAD 1.2.1.8 GO:0000166 ... Q9L4P8 N/A
    342855 5ez4:D (2.11) BS01 NAD 1.2.1.8 GO:0000166 ... Q9L4P8 N/A
    342856 5ez5:A (2.4) BS01 MG 3.6.5.2 GO:0003924 ... P62491 N/A
    342857 5ez5:A (2.4) BS02 GTP 3.6.5.2 GO:0003924 ... P62491 N/A
    342858 5ez5:B (2.4) BS01 MG 3.6.5.2 GO:0003924 ... P62491 N/A
    342859 5ez5:B (2.4) BS02 GTP 3.6.5.2 GO:0003924 ... P62491 N/A
    342860 5ez6:B (1.8) BS01 MG 3.6.5.2 GO:0000902 ... P61586 N/A
    342861 5ez6:B (1.8) BS02 MG 3.6.5.2 GO:0000902 ... P61586 N/A
    342862 5ez6:B (1.8) BS03 MG 3.6.5.2 GO:0000902 ... P61586 N/A
    342863 5ez6:B (1.8) BS04 GDP 3.6.5.2 GO:0000902 ... P61586 N/A
    342864 5ez7:A (2.4) BS01 FAD 1.-.-.- GO:0005737 ... Q9HUH4 26841760
    342865 5ez8:A (1.95) BS01 peptide N/A N/A N/A 27554410
    342866 5ez8:E (1.95) BS01 peptide N/A N/A N/A 27554410
    342867 5ez8:G (1.95) BS01 peptide N/A N/A N/A 27554410
    342868 5ez8:G (1.95) BS02 peptide N/A N/A N/A 27554410
    342869 5ez9:B (1.8) BS01 peptide N/A N/A N/A 27554410
    342870 5ez9:B (1.8) BS02 peptide N/A N/A N/A 27554410
    342871 5ez9:F (1.8) BS01 peptide N/A N/A N/A 27554410
    342872 5ez9:F (1.8) BS02 peptide N/A N/A N/A 27554410
    342873 5ezc:B (1.8) BS01 peptide N/A N/A N/A 27554410
    342874 5ezc:F (1.8) BS01 peptide N/A N/A N/A 27554410
    342875 5ezg:A (1.84) BS01 5T4 ? GO:0000976 ... P9WMC1 26806381 MOAD: Kd=12uM
    342876 5ezg:A (1.84) BS02 5T4 ? GO:0000976 ... P9WMC1 26806381 MOAD: Kd=12uM
    342877 5ezh:A (1.7) BS01 841 ? GO:0000976 ... P9WMC1 26806381 MOAD: Kd=24uM
    342878 5ezh:A (1.7) BS02 841 ? GO:0000976 ... P9WMC1 26806381 MOAD: Kd=24uM
    342879 5ezm:A (2.7) BS01 ZN 2.4.2.43 GO:0005886 ... Q1LDT6 26912703
    342880 5ezm:A (2.7) BS02 DSL 2.4.2.43 GO:0005886 ... Q1LDT6 26912703
    342881 5ezm:A (2.7) BS03 MPG 2.4.2.43 GO:0005886 ... Q1LDT6 26912703
    342882 5ezm:A (2.7) BS04 MPG 2.4.2.43 GO:0005886 ... Q1LDT6 26912703
    342883 5ezm:A (2.7) BS05 MPG 2.4.2.43 GO:0005886 ... Q1LDT6 26912703
    342884 5ezm:A (2.7) BS06 MPG 2.4.2.43 GO:0005886 ... Q1LDT6 26912703
    342885 5ezm:A (2.7) BS07 MPG 2.4.2.43 GO:0005886 ... Q1LDT6 26912703
    342886 5ezm:A (2.7) BS08 MPG 2.4.2.43 GO:0005886 ... Q1LDT6 26912703
    342887 5ezm:A (2.7) BS09 MPG 2.4.2.43 GO:0005886 ... Q1LDT6 26912703
    342888 5ezm:A (2.7) BS10 MPG 2.4.2.43 GO:0005886 ... Q1LDT6 26912703
    342889 5ezm:A (2.7) BS11 MPG 2.4.2.43 GO:0005886 ... Q1LDT6 26912703
    342890 5ezm:A (2.7) BS12 MPG 2.4.2.43 GO:0005886 ... Q1LDT6 26912703
    342891 5ezm:A (2.7) BS13 PC 2.4.2.43 GO:0005886 ... Q1LDT6 26912703
    342892 5ezp:A (2.5) BS01 IPJ ? GO:0001523 ... P02766 26796656
    342893 5ezp:C (2.5) BS01 IPJ ? GO:0001523 ... P02766 26796656
    342894 5ezp:C (2.5) BS02 IPJ ? GO:0001523 ... P02766 26796656
    342895 5ezp:D (2.5) BS01 IPJ ? GO:0001523 ... P02766 26796656
    342896 5ezp:G (2.5) BS01 IPJ ? GO:0001523 ... P02766 26796656
    342897 5ezp:H (2.5) BS01 IPJ ? GO:0001523 ... P02766 26796656
    342898 5ezr:A (2.5) BS01 4ZS 2.7.11.12 GO:0004672 ... A5K0N4 N/A
    342899 5ezs:A (2.16) BS01 E6D 2.1.1.-
    2.7.7.-
    2.7.7.19
    2.7.7.48
    3.1.3.84
    3.4.22.-
    3.6.1.15
    3.6.1.74
    3.6.4.13
    N/A P27282 27030368
    342900 5ezt:X (1.54) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004089 ... P00921 27292012
    342901 5ezu:A (1.55) BS01 MYR ? N/A P26672 27973613
    342902 5ezv:A (2.99) BS01 STU 2.7.11.1
    2.7.11.26
    2.7.11.31
    GO:0004672 ... P54646
    Q13131
    26952388
    342903 5ezv:A (2.99) BS02 C1V 2.7.11.1
    2.7.11.26
    2.7.11.31
    GO:0004672 ... P54646
    Q13131
    26952388
    342904 5ezv:B (2.99) BS01 C1V ? GO:0005515 ... Q9Y478 26952388 BindingDB: Kd=487nM, EC50=390nM
    342905 5ezv:C (2.99) BS01 STU 2.7.11.1
    2.7.11.26
    2.7.11.31
    GO:0004672 ... P54646
    Q13131
    26952388
    342906 5ezv:C (2.99) BS02 C1V 2.7.11.1
    2.7.11.26
    2.7.11.31
    GO:0004672 ... P54646
    Q13131
    26952388
    342907 5ezv:D (2.99) BS01 C1V ? GO:0005515 ... Q9Y478 26952388 BindingDB: Kd=487nM, EC50=390nM
    342908 5ezv:E (2.99) BS01 C2Z ? GO:0004691 ... P54619 26952388
    342909 5ezv:E (2.99) BS02 C2Z ? GO:0004691 ... P54619 26952388
    342910 5ezv:F (2.99) BS01 C2Z ? GO:0004691 ... P54619 26952388
    342911 5ezv:F (2.99) BS02 C2Z ? GO:0004691 ... P54619 26952388
    342912 5ezw:A (1.65) BS01 FE2 1.13.11.20 GO:0005506 ... P21816 N/A
    342913 5ezx:A (1.9) BS01 5T5 3.4.23.46 GO:0004190 ... P56817 26878596 MOAD: ic50=87nM
    342914 5ezy:A (2.05) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 28585532
    342915 5ezy:A (2.05) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 28585532
    342916 5ezy:B (2.05) BS01 GDP ? GO:0000226 ... Q6B856 28585532
    342917 5ezy:B (2.05) BS02 TAJ ? GO:0000226 ... Q6B856 28585532
    342918 5ezy:C (2.05) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 28585532
    342919 5ezy:C (2.05) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 28585532
    342920 5ezy:D (2.05) BS01 GTP ? GO:0000226 ... Q6B856 28585532
    342921 5ezy:D (2.05) BS02 TAJ ? GO:0000226 ... Q6B856 28585532
    342922 5ezy:F (2.05) BS01 ACP N/A GO:0036211 ... N/A 28585532
    342923 5ezz:A (2.1) BS01 5T6 3.4.23.46 GO:0004190 ... P56817 26878596 MOAD: ic50=145nM
    342924 5f00:A (1.95) BS01 5T8 3.4.23.46 GO:0004190 ... P56817 26878596 MOAD: ic50=250nM
    BindingDB: IC50=250nM
    342925 5f01:A (1.52) BS01 5T7 3.4.23.46 GO:0004190 ... P56817 26878596 MOAD: ic50=420nM
    342926 5f02:A (1.43) BS01 5T9 3.4.22.15 GO:0006508 ... P07711 26878596
    342927 5f03:A (1.94) BS01 5TA 3.4.21.59 GO:0004252 ... Q15661 26878596
    342928 5f03:B (1.94) BS01 5TA 3.4.21.59 GO:0004252 ... Q15661 26878596
    342929 5f04:A (1.84) BS01 5TB ? GO:0000976 ... P9WMC1 26806381
    342930 5f05:A (1.7) BS01 GSH 2.5.1.18 GO:0004364 ... D2WL63 28622459
    342931 5f05:B (1.7) BS01 GSH 2.5.1.18 GO:0004364 ... D2WL63 28622459
    342932 5f05:C (1.7) BS01 GSH 2.5.1.18 GO:0004364 ... D2WL63 28622459
    342933 5f05:D (1.7) BS01 GSH 2.5.1.18 GO:0004364 ... D2WL63 28622459
    342934 5f06:A (1.8) BS01 GSH 2.5.1.18 GO:0004364 ... U5GTL0 28622459
    342935 5f06:B (1.8) BS01 GSH 2.5.1.18 GO:0004364 ... U5GTL0 28622459
    342936 5f07:A (1.5) BS01 GSH 2.5.1.18 GO:0004364 ... B9MWW0 28622459
    342937 5f08:A (1.92) BS01 5TG ? GO:0000976 ... P9WMC1 26806381 MOAD: Kd=3uM
    342938 5f09:A (1.85) BS01 ZN 3.4.17.21 GO:0004180 ... Q04609 27208881
    342939 5f09:A (1.85) BS02 ZN 3.4.17.21 GO:0004180 ... Q04609 27208881
    342940 5f09:A (1.85) BS03 CA 3.4.17.21 GO:0004180 ... Q04609 27208881
    342941 5f09:A (1.85) BS04 BC8 3.4.17.21 GO:0004180 ... Q04609 27208881
    342942 5f0a:A (2.6) BS01 1FB 2.7.11.12 GO:0004672 ... A5K0N4 N/A
    342943 5f0b:A (2.146) BS01 HEM 1.7.-.- GO:0005092 ... Q9ER97 28500341
    342944 5f0c:A (1.87) BS01 5TE ? GO:0000976 ... P9WMC1 26806381
    342945 5f0e:B (1.74) BS01 CA ? N/A O08795 27462106
    342946 5f0e:B (1.74) BS02 CA ? N/A O08795 27462106
    342947 5f0f:A (1.76) BS01 5TD ? GO:0000976 ... P9WMC1 26806381 MOAD: Kd=1uM
    342948 5f0h:A (1.99) BS01 5TC ? GO:0000976 ... P9WMC1 26806381 MOAD: ic50=33uM
    342949 5f0l:B (3.2) BS01 peptide ? GO:0005515 ... O75436 27889239
    342950 5f0l:C (3.2) BS01 peptide ? GO:0005515 ... O60493 27889239
    342951 5f0m:B (3.1) BS01 peptide ? GO:0005515 ... O75436 27889239
    342952 5f0m:C (3.1) BS01 peptide ? GO:0005515 ... O60493 27889239
    342953 5f0o:A (3.5) BS01 peptide ? GO:0007064 ... C5DGP8 26923598
    342954 5f0p:B (2.78) BS01 peptide ? GO:0005515 ... O75436 27889239
    342955 5f0p:B (2.78) BS02 ZN ? GO:0005515 ... O75436 27889239
    342956 5f0p:C (2.78) BS01 peptide ? GO:0005515 ... O60493 27889239
    342957 5f0q:A (2.21) BS01 rna 2.7.7.- GO:0006269 ... P49643 26975377
    342958 5f0q:A (2.21) BS02 dna 2.7.7.- GO:0006269 ... P49643 26975377
    342959 5f0q:A (2.21) BS03 SF4 2.7.7.- GO:0006269 ... P49643 26975377
    342960 5f0q:B (2.21) BS01 rna 2.7.7.- GO:0006269 ... P49643 26975377
    342961 5f0q:B (2.21) BS02 dna 2.7.7.- GO:0006269 ... P49643 26975377
    342962 5f0q:B (2.21) BS03 SF4 2.7.7.- GO:0006269 ... P49643 26975377
    342963 5f0s:A (3.0) BS01 rna 2.7.7.- GO:0006269 ... P49643 26975377
    342964 5f0s:A (3.0) BS02 dna 2.7.7.- GO:0006269 ... P49643 26975377
    342965 5f0s:A (3.0) BS03 SF4 2.7.7.- GO:0006269 ... P49643 26975377
    342966 5f0s:B (3.0) BS01 rna 2.7.7.- GO:0006269 ... P49643 26975377
    342967 5f0s:B (3.0) BS02 dna 2.7.7.- GO:0006269 ... P49643 26975377
    342968 5f0s:B (3.0) BS03 SF4 2.7.7.- GO:0006269 ... P49643 26975377
    342969 5f0x:A (1.6) BS01 PO4 3.6.4.10 GO:0005524 ... P11021 27144892
    342970 5f0x:A (1.6) BS02 DTP 3.6.4.10 GO:0005524 ... P11021 27144892
    342971 5f0x:B (1.6) BS01 PO4 3.6.4.10 GO:0005524 ... P11021 27144892
    342972 5f0x:B (1.6) BS02 DTP 3.6.4.10 GO:0005524 ... P11021 27144892
    342973 5f0x:B (1.6) BS03 DAT 3.6.4.10 GO:0005524 ... P11021 27144892
    342974 5f0z:A (1.75) BS01 FRU 2.7.1.4 GO:0000166 ... A0A0H3AER7 N/A
    342975 5f0z:A (1.75) BS02 ADP 2.7.1.4 GO:0000166 ... A0A0H3AER7 N/A
    342976 5f11:A (2.3) BS01 FRU 2.7.1.4 GO:0000166 ... A0A0H3AER7 N/A
    342977 5f12:A (1.5) BS01 FMN 1.6.5.2 GO:0000166 ... P0A8G6 27183467
    342978 5f12:A (1.5) BS02 FMN 1.6.5.2 GO:0000166 ... P0A8G6 27183467
    342979 5f12:B (1.5) BS01 FMN 1.6.5.2 GO:0000166 ... P0A8G6 27183467
    342980 5f12:B (1.5) BS02 FMN 1.6.5.2 GO:0000166 ... P0A8G6 27183467
    342981 5f13:A (2.393) BS01 MN 3.1.3.- GO:0005634 ... Q04371 27322068
    342982 5f13:A (2.393) BS02 PO4 3.1.3.- GO:0005634 ... Q04371 27322068
    342983 5f13:A (2.393) BS03 PO4 3.1.3.- GO:0005634 ... Q04371 27322068
    342984 5f13:B (2.393) BS01 MN 3.1.3.- GO:0005634 ... Q04371 27322068
    342985 5f13:B (2.393) BS02 PO4 3.1.3.- GO:0005634 ... Q04371 27322068
    342986 5f13:B (2.393) BS03 PO4 3.1.3.- GO:0005634 ... Q04371 27322068
    342987 5f13:C (2.393) BS01 MN 3.1.3.- GO:0005634 ... Q04371 27322068
    342988 5f13:C (2.393) BS02 PO4 3.1.3.- GO:0005634 ... Q04371 27322068
    342989 5f13:C (2.393) BS03 PO4 3.1.3.- GO:0005634 ... Q04371 27322068
    342990 5f14:A (1.148) BS01 CL 3.2.1.17 GO:0003796 ... P00698 26866284
    342991 5f15:A (3.2) BS01 MPG ? GO:0005886 ... Q1LDT6 26912703
    342992 5f15:A (3.2) BS02 MPG ? GO:0005886 ... Q1LDT6 26912703
    342993 5f15:A (3.2) BS03 MPG ? GO:0005886 ... Q1LDT6 26912703
    342994 5f15:A (3.2) BS04 MPG ? GO:0005886 ... Q1LDT6 26912703
    342995 5f15:A (3.2) BS05 MPG ? GO:0005886 ... Q1LDT6 26912703
    342996 5f15:A (3.2) BS06 MPG ? GO:0005886 ... Q1LDT6 26912703
    342997 5f15:A (3.2) BS07 MPG ? GO:0005886 ... Q1LDT6 26912703
    342998 5f15:A (3.2) BS08 MPG ? GO:0005886 ... Q1LDT6 26912703
    342999 5f15:A (3.2) BS09 5TR ? GO:0005886 ... Q1LDT6 26912703
    343000 5f16:A (1.2) BS01 CL 3.2.1.17 GO:0003796 ... P00698 26866284

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).