SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    343601 5f88:A (2.481) BS01 peptide N/A N/A N/A 27834791
    343602 5f88:B (2.481) BS01 peptide N/A N/A N/A 27834791
    343603 5f88:C (2.481) BS01 peptide N/A N/A N/A 27834791
    343604 5f88:D (2.481) BS01 peptide N/A N/A N/A 27834791
    343605 5f8a:A (1.76) BS01 dna 3.1.21.4 GO:0003677 ... P04390 27786446
    343606 5f8a:A (1.76) BS02 dna 3.1.21.4 GO:0003677 ... P04390 27786446
    343607 5f8a:B (1.76) BS01 dna 3.1.21.4 GO:0003677 ... P04390 27786446
    343608 5f8a:B (1.76) BS02 dna 3.1.21.4 GO:0003677 ... P04390 27786446
    343609 5f8b:A (2.54) BS01 GSH 2.5.1.- GO:0003674 ... Q4WB03 27072782
    343610 5f8b:A (2.54) BS02 PZS 2.5.1.- GO:0003674 ... Q4WB03 27072782
    343611 5f8e:A (2.9) BS01 SAH 2.1.1.- GO:0005886 ... O53532 26772148
    343612 5f8e:B (2.9) BS01 SAH 2.1.1.- GO:0005886 ... O53532 26772148
    343613 5f8f:A (1.9) BS01 SFG 2.1.1.- GO:0005886 ... O53532 26772148
    343614 5f8f:B (1.9) BS01 SFG 2.1.1.- GO:0005886 ... O53532 26772148
    343615 5f8f:C (1.9) BS01 SFG 2.1.1.- GO:0005886 ... O53532 26772148
    343616 5f8g:A (2.78) BS01 rna 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0003723 ... E5RPG3 27339134
    343617 5f8g:A (2.78) BS02 rna 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0003723 ... E5RPG3 27339134
    343618 5f8g:A (2.78) BS03 ZN 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0003723 ... E5RPG3 27339134
    343619 5f8h:A (2.45) BS01 rna 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0003723 ... E5RPG2 27339134
    343620 5f8h:A (2.45) BS02 rna 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0003723 ... E5RPG2 27339134
    343621 5f8h:A (2.45) BS03 ZN 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0003723 ... E5RPG2 27339134
    343622 5f8i:A (2.503) BS01 rna 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0003723 ... E5RPG2 27339134
    343623 5f8i:A (2.503) BS02 rna 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0003723 ... E5RPG2 27339134
    343624 5f8i:A (2.503) BS03 CTP 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0003723 ... E5RPG2 27339134
    343625 5f8i:A (2.503) BS04 ZN 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0003723 ... E5RPG2 27339134
    343626 5f8i:A (2.503) BS05 MG 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0003723 ... E5RPG2 27339134
    343627 5f8i:A (2.503) BS06 MG 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0003723 ... E5RPG2 27339134
    343628 5f8j:A (2.675) BS01 rna 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0003723 ... E5RPG2 27339134
    343629 5f8j:A (2.675) BS02 rna 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0003723 ... E5RPG2 27339134
    343630 5f8j:A (2.675) BS03 MG 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0003723 ... E5RPG2 27339134
    343631 5f8j:A (2.675) BS04 MG 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0003723 ... E5RPG2 27339134
    343632 5f8j:A (2.675) BS05 ZN 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0003723 ... E5RPG2 27339134
    343633 5f8j:A (2.675) BS06 POP 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0003723 ... E5RPG2 27339134
    343634 5f8k:10 (2.8) BS01 rna ? GO:0003735 ... P60493 26792896
    343635 5f8k:10 (2.8) BS02 rna ? GO:0003735 ... P60493 26792896
    343636 5f8k:10 (2.8) BS03 MG ? GO:0003735 ... P60493 26792896
    343637 5f8k:10 (2.8) BS04 MG ? GO:0003735 ... P60493 26792896
    343638 5f8k:11 (2.8) BS01 rna ? GO:0003735 ... P60494 26792896
    343639 5f8k:12 (2.8) BS01 rna ? GO:0003735 ... Q5SHP6 26792896
    343640 5f8k:13 (2.8) BS01 rna ? GO:0003735 ... Q5SHQ6 26792896
    343641 5f8k:13 (2.8) BS02 rna ? GO:0003735 ... Q5SHQ6 26792896
    343642 5f8k:13 (2.8) BS03 MG ? GO:0003735 ... Q5SHQ6 26792896
    343643 5f8k:14 (2.8) BS01 rna ? GO:0003735 ... Q5SJE1 26792896
    343644 5f8k:14 (2.8) BS02 ZN ? GO:0003735 ... Q5SJE1 26792896
    343645 5f8k:15 (2.8) BS01 rna ? GO:0003735 ... P80339 26792896
    343646 5f8k:15 (2.8) BS02 MG ? GO:0003735 ... P80339 26792896
    343647 5f8k:15 (2.8) BS03 ZN ? GO:0003735 ... P80339 26792896
    343648 5f8k:16 (2.8) BS01 rna ? GO:0000049 ... P35871 26792896
    343649 5f8k:16 (2.8) BS02 ZN ? GO:0000049 ... P35871 26792896
    343650 5f8k:17 (2.8) BS01 rna ? GO:0003735 ... P80340 26792896
    343651 5f8k:17 (2.8) BS02 MG ? GO:0003735 ... P80340 26792896
    343652 5f8k:17 (2.8) BS03 MG ? GO:0003735 ... P80340 26792896
    343653 5f8k:18 (2.8) BS01 rna ? GO:0003735 ... Q5SKU1 26792896
    343654 5f8k:18 (2.8) BS02 MG ? GO:0003735 ... Q5SKU1 26792896
    343655 5f8k:19 (2.8) BS01 rna ? GO:0003735 ... Q5SHR2 26792896
    343656 5f8k:19 (2.8) BS02 ZN ? GO:0003735 ... Q5SHR2 26792896
    343657 5f8k:1D (2.8) BS01 rna ? GO:0002181 ... P60405 26792896
    343658 5f8k:1D (2.8) BS02 MG ? GO:0002181 ... P60405 26792896
    343659 5f8k:1D (2.8) BS03 MG ? GO:0002181 ... P60405 26792896
    343660 5f8k:1D (2.8) BS04 MG ? GO:0002181 ... P60405 26792896
    343661 5f8k:1D (2.8) BS05 MG ? GO:0002181 ... P60405 26792896
    343662 5f8k:1D (2.8) BS06 MG ? GO:0002181 ... P60405 26792896
    343663 5f8k:1D (2.8) BS07 MG ? GO:0002181 ... P60405 26792896
    343664 5f8k:1E (2.8) BS01 rna ? GO:0003735 ... Q5SHN8 26792896
    343665 5f8k:1E (2.8) BS02 MG ? GO:0003735 ... Q5SHN8 26792896
    343666 5f8k:1E (2.8) BS03 MG ? GO:0003735 ... Q5SHN8 26792896
    343667 5f8k:1E (2.8) BS04 MG ? GO:0003735 ... Q5SHN8 26792896
    343668 5f8k:1F (2.8) BS01 rna ? GO:0003735 ... Q5SHN9 26792896
    343669 5f8k:1F (2.8) BS02 MG ? GO:0003735 ... Q5SHN9 26792896
    343670 5f8k:1F (2.8) BS03 MG ? GO:0003735 ... Q5SHN9 26792896
    343671 5f8k:1F (2.8) BS04 MG ? GO:0003735 ... Q5SHN9 26792896
    343672 5f8k:1F (2.8) BS05 MG ? GO:0003735 ... Q5SHN9 26792896
    343673 5f8k:1F (2.8) BS06 MG ? GO:0003735 ... Q5SHN9 26792896
    343674 5f8k:1F (2.8) BS07 MG ? GO:0003735 ... Q5SHN9 26792896
    343675 5f8k:1F (2.8) BS08 MG ? GO:0003735 ... Q5SHN9 26792896
    343676 5f8k:1F (2.8) BS09 MG ? GO:0003735 ... Q5SHN9 26792896
    343677 5f8k:1G (2.8) BS01 rna ? GO:0000049 ... Q5SHQ0 26792896
    343678 5f8k:1G (2.8) BS02 rna ? GO:0000049 ... Q5SHQ0 26792896
    343679 5f8k:1G (2.8) BS03 MG ? GO:0000049 ... Q5SHQ0 26792896
    343680 5f8k:1G (2.8) BS04 MG ? GO:0000049 ... Q5SHQ0 26792896
    343681 5f8k:1G (2.8) BS05 MG ? GO:0000049 ... Q5SHQ0 26792896
    343682 5f8k:1H (2.8) BS01 rna N/A GO:0003735 ... N/A 26792896
    343683 5f8k:1I (2.8) BS01 rna ? GO:0003735 ... Q5SLQ1 26792896
    343684 5f8k:1N (2.8) BS01 rna ? GO:0003729 ... P60488 26792896
    343685 5f8k:1O (2.8) BS01 rna ? GO:0003735 ... Q5SHP8 26792896
    343686 5f8k:1O (2.8) BS02 rna ? GO:0003735 ... Q5SHP8 26792896
    343687 5f8k:1P (2.8) BS01 rna ? GO:0003735 ... Q5SHQ7 26792896
    343688 5f8k:1P (2.8) BS02 MG ? GO:0003735 ... Q5SHQ7 26792896
    343689 5f8k:1P (2.8) BS03 MG ? GO:0003735 ... Q5SHQ7 26792896
    343690 5f8k:1Q (2.8) BS01 rna ? GO:0000049 ... P60489 26792896
    343691 5f8k:1Q (2.8) BS02 rna ? GO:0000049 ... P60489 26792896
    343692 5f8k:1Q (2.8) BS03 MG ? GO:0000049 ... P60489 26792896
    343693 5f8k:1Q (2.8) BS04 MG ? GO:0000049 ... P60489 26792896
    343694 5f8k:1Q (2.8) BS05 MG ? GO:0000049 ... P60489 26792896
    343695 5f8k:1Q (2.8) BS06 MG ? GO:0000049 ... P60489 26792896
    343696 5f8k:1R (2.8) BS01 rna ? GO:0003735 ... Q9Z9H5 26792896
    343697 5f8k:1R (2.8) BS02 MG ? GO:0003735 ... Q9Z9H5 26792896
    343698 5f8k:1R (2.8) BS03 MG ? GO:0003735 ... Q9Z9H5 26792896
    343699 5f8k:1R (2.8) BS04 MG ? GO:0003735 ... Q9Z9H5 26792896
    343700 5f8k:1R (2.8) BS05 MG ? GO:0003735 ... Q9Z9H5 26792896
    343701 5f8k:1S (2.8) BS01 rna ? GO:0003735 ... Q5SHQ4 26792896
    343702 5f8k:1S (2.8) BS02 rna ? GO:0003735 ... Q5SHQ4 26792896
    343703 5f8k:1T (2.8) BS01 rna ? GO:0003735 ... P60490 26792896
    343704 5f8k:1T (2.8) BS02 rna ? GO:0003735 ... P60490 26792896
    343705 5f8k:1T (2.8) BS03 MG ? GO:0003735 ... P60490 26792896
    343706 5f8k:1U (2.8) BS01 rna ? GO:0000027 ... P60491 26792896
    343707 5f8k:1U (2.8) BS02 MG ? GO:0000027 ... P60491 26792896
    343708 5f8k:1U (2.8) BS03 MG ? GO:0000027 ... P60491 26792896
    343709 5f8k:1U (2.8) BS04 MG ? GO:0000027 ... P60491 26792896
    343710 5f8k:1U (2.8) BS05 MG ? GO:0000027 ... P60491 26792896
    343711 5f8k:1V (2.8) BS01 rna ? GO:0003723 ... P60492 26792896
    343712 5f8k:1V (2.8) BS02 MG ? GO:0003723 ... P60492 26792896
    343713 5f8k:1V (2.8) BS03 MG ? GO:0003723 ... P60492 26792896
    343714 5f8k:1V (2.8) BS04 MG ? GO:0003723 ... P60492 26792896
    343715 5f8k:1W (2.8) BS01 rna ? GO:0003735 ... Q5SHP3 26792896
    343716 5f8k:1W (2.8) BS02 MG ? GO:0003735 ... Q5SHP3 26792896
    343717 5f8k:1X (2.8) BS01 rna ? GO:0003735 ... Q5SHP0 26792896
    343718 5f8k:1Y (2.8) BS01 rna ? GO:0003723 ... Q5SHP9 26792896
    343719 5f8k:1Y (2.8) BS02 ZN ? GO:0003723 ... Q5SHP9 26792896
    343720 5f8k:1Z (2.8) BS01 rna ? GO:0003723 ... Q5SHZ1 26792896
    343721 5f8k:1Z (2.8) BS02 rna ? GO:0003723 ... Q5SHZ1 26792896
    343722 5f8k:1Z (2.8) BS03 rna ? GO:0003723 ... Q5SHZ1 26792896
    343723 5f8k:1b (2.8) BS01 rna ? GO:0003735 ... P80371 26792896
    343724 5f8k:1b (2.8) BS02 MG ? GO:0003735 ... P80371 26792896
    343725 5f8k:1c (2.8) BS01 rna ? GO:0003676 ... P80372 26792896
    343726 5f8k:1d (2.8) BS01 rna ? GO:0003723 ... P80373 26792896
    343727 5f8k:1d (2.8) BS02 SF4 ? GO:0003723 ... P80373 26792896
    343728 5f8k:1e (2.8) BS01 rna ? GO:0003723 ... Q5SHQ5 26792896
    343729 5f8k:1e (2.8) BS02 MG ? GO:0003723 ... Q5SHQ5 26792896
    343730 5f8k:1f (2.8) BS01 rna ? GO:0003735 ... Q5SLP8 26792896
    343731 5f8k:1g (2.8) BS01 rna ? GO:0000049 ... P17291 26792896
    343732 5f8k:1h (2.8) BS01 rna N/A GO:0003735 ... N/A 26792896
    343733 5f8k:1i (2.8) BS01 rna ? GO:0000049 ... P80374 26792896
    343734 5f8k:1i (2.8) BS02 rna ? GO:0000049 ... P80374 26792896
    343735 5f8k:1j (2.8) BS01 rna ? GO:0000049 ... Q5SHN7 26792896
    343736 5f8k:1k (2.8) BS01 rna ? GO:0003735 ... P80376 26792896
    343737 5f8k:1k (2.8) BS02 MG ? GO:0003735 ... P80376 26792896
    343738 5f8k:1l (2.8) BS01 rna ? GO:0000049 ... Q5SHN3 26792896
    343739 5f8k:1l (2.8) BS02 MG ? GO:0000049 ... Q5SHN3 26792896
    343740 5f8k:1m (2.8) BS01 rna ? GO:0000049 ... P80377 26792896
    343741 5f8k:1m (2.8) BS02 rna ? GO:0000049 ... P80377 26792896
    343742 5f8k:1m (2.8) BS03 MG ? GO:0000049 ... P80377 26792896
    343743 5f8k:1n (2.8) BS01 rna N/A GO:0003735 ... N/A 26792896
    343744 5f8k:1n (2.8) BS02 ZN N/A GO:0003735 ... N/A 26792896
    343745 5f8k:1o (2.8) BS01 rna ? GO:0003735 ... Q5SJ76 26792896
    343746 5f8k:1o (2.8) BS02 rna ? GO:0003735 ... Q5SJ76 26792896
    343747 5f8k:1p (2.8) BS01 rna ? GO:0003735 ... Q5SJH3 26792896
    343748 5f8k:1q (2.8) BS01 rna N/A GO:0003735 ... N/A 26792896
    343749 5f8k:1r (2.8) BS01 rna ? GO:0003735 ... Q5SLQ0 26792896
    343750 5f8k:1s (2.8) BS01 rna ? GO:0003723 ... Q5SHP2 26792896
    343751 5f8k:1t (2.8) BS01 rna ? GO:0003723 ... P80380 26792896
    343752 5f8k:1t (2.8) BS02 MG ? GO:0003723 ... P80380 26792896
    343753 5f8k:20 (2.8) BS01 rna ? GO:0003735 ... P60493 26792896
    343754 5f8k:20 (2.8) BS02 rna ? GO:0003735 ... P60493 26792896
    343755 5f8k:20 (2.8) BS03 MG ? GO:0003735 ... P60493 26792896
    343756 5f8k:20 (2.8) BS04 MG ? GO:0003735 ... P60493 26792896
    343757 5f8k:20 (2.8) BS05 MG ? GO:0003735 ... P60493 26792896
    343758 5f8k:20 (2.8) BS06 MG ? GO:0003735 ... P60493 26792896
    343759 5f8k:20 (2.8) BS07 MG ? GO:0003735 ... P60493 26792896
    343760 5f8k:21 (2.8) BS01 rna ? GO:0003735 ... P60494 26792896
    343761 5f8k:21 (2.8) BS02 MG ? GO:0003735 ... P60494 26792896
    343762 5f8k:22 (2.8) BS01 rna ? GO:0003735 ... Q5SHP6 26792896
    343763 5f8k:23 (2.8) BS01 rna ? GO:0003735 ... Q5SHQ6 26792896
    343764 5f8k:23 (2.8) BS02 rna ? GO:0003735 ... Q5SHQ6 26792896
    343765 5f8k:23 (2.8) BS03 MG ? GO:0003735 ... Q5SHQ6 26792896
    343766 5f8k:24 (2.8) BS01 rna ? GO:0003735 ... Q5SJE1 26792896
    343767 5f8k:24 (2.8) BS02 ZN ? GO:0003735 ... Q5SJE1 26792896
    343768 5f8k:25 (2.8) BS01 rna ? GO:0003735 ... P80339 26792896
    343769 5f8k:25 (2.8) BS02 MG ? GO:0003735 ... P80339 26792896
    343770 5f8k:25 (2.8) BS03 MG ? GO:0003735 ... P80339 26792896
    343771 5f8k:25 (2.8) BS04 MG ? GO:0003735 ... P80339 26792896
    343772 5f8k:25 (2.8) BS05 ZN ? GO:0003735 ... P80339 26792896
    343773 5f8k:26 (2.8) BS01 rna ? GO:0000049 ... P35871 26792896
    343774 5f8k:26 (2.8) BS02 ZN ? GO:0000049 ... P35871 26792896
    343775 5f8k:27 (2.8) BS01 rna ? GO:0003735 ... P80340 26792896
    343776 5f8k:27 (2.8) BS02 MG ? GO:0003735 ... P80340 26792896
    343777 5f8k:28 (2.8) BS01 rna ? GO:0003735 ... Q5SKU1 26792896
    343778 5f8k:28 (2.8) BS02 MG ? GO:0003735 ... Q5SKU1 26792896
    343779 5f8k:29 (2.8) BS01 rna ? GO:0003735 ... Q5SHR2 26792896
    343780 5f8k:29 (2.8) BS02 ZN ? GO:0003735 ... Q5SHR2 26792896
    343781 5f8k:2D (2.8) BS01 rna ? GO:0002181 ... P60405 26792896
    343782 5f8k:2D (2.8) BS02 rna ? GO:0002181 ... P60405 26792896
    343783 5f8k:2D (2.8) BS03 MG ? GO:0002181 ... P60405 26792896
    343784 5f8k:2D (2.8) BS04 MG ? GO:0002181 ... P60405 26792896
    343785 5f8k:2D (2.8) BS05 MG ? GO:0002181 ... P60405 26792896
    343786 5f8k:2D (2.8) BS06 MG ? GO:0002181 ... P60405 26792896
    343787 5f8k:2D (2.8) BS07 MG ? GO:0002181 ... P60405 26792896
    343788 5f8k:2D (2.8) BS08 MG ? GO:0002181 ... P60405 26792896
    343789 5f8k:2D (2.8) BS09 MG ? GO:0002181 ... P60405 26792896
    343790 5f8k:2D (2.8) BS10 MG ? GO:0002181 ... P60405 26792896
    343791 5f8k:2D (2.8) BS11 MG ? GO:0002181 ... P60405 26792896
    343792 5f8k:2D (2.8) BS12 MG ? GO:0002181 ... P60405 26792896
    343793 5f8k:2D (2.8) BS13 MG ? GO:0002181 ... P60405 26792896
    343794 5f8k:2E (2.8) BS01 rna ? GO:0003735 ... Q5SHN8 26792896
    343795 5f8k:2E (2.8) BS02 MG ? GO:0003735 ... Q5SHN8 26792896
    343796 5f8k:2E (2.8) BS03 MG ? GO:0003735 ... Q5SHN8 26792896
    343797 5f8k:2E (2.8) BS04 MG ? GO:0003735 ... Q5SHN8 26792896
    343798 5f8k:2E (2.8) BS05 MG ? GO:0003735 ... Q5SHN8 26792896
    343799 5f8k:2F (2.8) BS01 rna ? GO:0003735 ... Q5SHN9 26792896
    343800 5f8k:2F (2.8) BS02 MG ? GO:0003735 ... Q5SHN9 26792896

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).