SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    345601 5ff6:A (2.5) BS01 peptide N/A N/A N/A 27834791
    345602 5ff6:B (2.5) BS01 peptide N/A N/A N/A 27834791
    345603 5ff6:C (2.5) BS01 peptide N/A N/A N/A 27834791
    345604 5ff6:D (2.5) BS01 peptide N/A N/A N/A 27834791
    345605 5ff7:A (2.092) BS01 G3P 4.1.2.40 GO:0003824 ... P63705 N/A
    345606 5ff7:A (2.092) BS02 G3H 4.1.2.40 GO:0003824 ... P63705 N/A
    345607 5ff7:A (2.092) BS03 CA 4.1.2.40 GO:0003824 ... P63705 N/A
    345608 5ff7:A (2.092) BS04 CA 4.1.2.40 GO:0003824 ... P63705 N/A
    345609 5ff7:B (2.092) BS01 G3P 4.1.2.40 GO:0003824 ... P63705 N/A
    345610 5ff7:C (2.092) BS01 CA 4.1.2.40 GO:0003824 ... P63705 N/A
    345611 5ff7:C (2.092) BS02 G3P 4.1.2.40 GO:0003824 ... P63705 N/A
    345612 5ff7:C (2.092) BS03 G3H 4.1.2.40 GO:0003824 ... P63705 N/A
    345613 5ff7:D (2.092) BS01 G3P 4.1.2.40 GO:0003824 ... P63705 N/A
    345614 5ff8:A (1.7) BS01 dna 3.2.2.29 GO:0000700 ... Q13569 27580719
    345615 5ff8:A (1.7) BS02 dna 3.2.2.29 GO:0000700 ... Q13569 27580719
    345616 5ff9:A (1.814) BS01 NAP 1.1.1.- GO:0000166 ... A0A1A9TAK5 27252378
    345617 5ff9:B (1.814) BS01 NAP 1.1.1.- GO:0000166 ... A0A1A9TAK5 27252378
    345618 5ff9:B (1.814) BS02 AEF 1.1.1.- GO:0000166 ... A0A1A9TAK5 27252378 MOAD: ic50=5230uM
    345619 5ff9:C (1.814) BS01 NAP 1.1.1.- GO:0000166 ... A0A1A9TAK5 27252378
    345620 5ff9:D (1.814) BS01 AEF 1.1.1.- GO:0000166 ... A0A1A9TAK5 27252378 MOAD: ic50=5230uM
    345621 5ffc:A (2.007) BS01 CU ? N/A Q6YRW5 27599732
    345622 5ffc:A (2.007) BS02 CU ? N/A Q6YRW5 27599732
    345623 5ffd:A (1.451) BS01 AG ? N/A Q6YRW5 27599732
    345624 5ffe:A (2.096) BS01 AG ? N/A Q6YRW5 27599732
    345625 5ffe:A (2.096) BS02 AG ? N/A Q6YRW5 27599732
    345626 5ffe:A (2.096) BS03 AG ? N/A Q6YRW5 27599732
    345627 5ffe:A (2.096) BS04 AG ? N/A Q6YRW5 27599732
    345628 5ffe:B (2.096) BS01 AG ? N/A Q6YRW5 27599732
    345629 5ffe:B (2.096) BS02 AG ? N/A Q6YRW5 27599732
    345630 5ffe:B (2.096) BS03 AG ? N/A Q6YRW5 27599732
    345631 5fff:A (1.501) BS01 NAP 1.1.1.- GO:0000166 ... A0A1A9TAK5 27252378
    345632 5fff:A (1.501) BS02 5XC 1.1.1.- GO:0000166 ... A0A1A9TAK5 27252378 MOAD: ic50=425uM
    345633 5fff:B (1.501) BS01 NAP 1.1.1.- GO:0000166 ... A0A1A9TAK5 27252378
    345634 5ffg:A (2.25) BS01 CA ? GO:0007155 ... P06756 28117447
    345635 5ffg:A (2.25) BS02 CA ? GO:0007155 ... P06756 28117447
    345636 5ffg:A (2.25) BS03 CA ? GO:0007155 ... P06756 28117447
    345637 5ffg:A (2.25) BS04 CA ? GO:0007155 ... P06756 28117447
    345638 5ffg:B (2.25) BS01 CA ? N/A P18564 28117447
    345639 5ffg:B (2.25) BS02 CA ? N/A P18564 28117447
    345640 5ffh:A (1.68) BS01 RET ? GO:0001523 ... P50120 N/A
    345641 5ffh:B (1.68) BS01 RET ? GO:0001523 ... P50120 N/A
    345642 5ffi:A (2.17) BS01 FES ? GO:0005737 ... Q44501 26654855
    345643 5ffi:B (2.17) BS01 FES ? GO:0005737 ... Q44501 26654855
    345644 5ffi:C (2.17) BS01 FES ? GO:0005737 ... Q44501 26654855
    345645 5ffi:D (2.17) BS01 FES ? GO:0005737 ... Q44501 26654855
    345646 5ffi:E (2.17) BS01 FES ? GO:0005737 ... Q44501 26654855
    345647 5ffj:A (2.84) BS01 dna 2.1.1.72 GO:0003676 ... Q93R01 26975655
    345648 5ffj:A (2.84) BS02 dna 2.1.1.72 GO:0003676 ... Q93R01 26975655
    345649 5ffj:A (2.84) BS03 dna 2.1.1.72 GO:0003676 ... Q93R01 26975655
    345650 5ffj:B (2.84) BS01 dna 2.1.1.72 GO:0003676 ... Q93R01 26975655
    345651 5ffj:B (2.84) BS02 dna 2.1.1.72 GO:0003676 ... Q93R01 26975655
    345652 5ffj:B (2.84) BS03 dna 2.1.1.72 GO:0003676 ... Q93R01 26975655
    345653 5ffn:A (1.8) BS01 CA 3.4.21.14 GO:0004252 ... A0A182DWC8 N/A
    345654 5ffn:A (1.8) BS02 CA 3.4.21.14 GO:0004252 ... A0A182DWC8 N/A
    345655 5ffo:A (3.49) BS01 CA ? GO:0007155 ... P06756 28117447
    345656 5ffo:A (3.49) BS02 CA ? GO:0007155 ... P06756 28117447
    345657 5ffo:A (3.49) BS03 CA ? GO:0007155 ... P06756 28117447
    345658 5ffo:A (3.49) BS04 CA ? GO:0007155 ... P06756 28117447
    345659 5ffo:B (3.49) BS01 MAN ? N/A P18564 28117447
    345660 5ffo:B (3.49) BS02 MN ? N/A P18564 28117447
    345661 5ffo:B (3.49) BS03 MN ? N/A P18564 28117447
    345662 5ffo:B (3.49) BS04 MN ? N/A P18564 28117447
    345663 5ffo:E (3.49) BS01 CA ? GO:0007155 ... P06756 28117447
    345664 5ffo:E (3.49) BS02 CA ? GO:0007155 ... P06756 28117447
    345665 5ffo:E (3.49) BS03 CA ? GO:0007155 ... P06756 28117447
    345666 5ffo:E (3.49) BS04 CA ? GO:0007155 ... P06756 28117447
    345667 5ffo:F (3.49) BS01 MN ? N/A P18564 28117447
    345668 5ffo:F (3.49) BS02 MN ? N/A P18564 28117447
    345669 5ffo:F (3.49) BS03 MN ? N/A P18564 28117447
    345670 5ffr:A (2.2) BS01 CA ? N/A P08427 27324153
    345671 5ffr:A (2.2) BS02 PC ? N/A P08427 27324153
    345672 5ffs:A (1.8) BS01 CA ? N/A P08427 27324153
    345673 5fft:A (2.2) BS01 CA ? N/A P08427 27324153
    345674 5ffv:A (1.3) BS01 peptide ? N/A P55201 N/A
    345675 5ffv:B (1.3) BS01 peptide ? N/A P55201 N/A
    345676 5ffw:A (1.5) BS01 peptide ? N/A P55201 N/A
    345677 5ffw:B (1.5) BS01 peptide ? N/A P55201 N/A
    345678 5ffy:A (1.55) BS01 5XD ? N/A P55201 N/A
    345679 5ffz:A (2.585) BS01 ET ? GO:0003700 ... Q5Y812 N/A
    345680 5fg3:A (1.9) BS01 GDP ? GO:0003743 ... Q9Y9B3 26868175
    345681 5fg4:A (1.65) BS01 5XE ? N/A P55201 N/A BindingDB: IC50=270nM, Kd=100nM
    345682 5fg5:A (1.5) BS01 5XF ? N/A P55201 N/A BindingDB: IC50=50nM, Kd=13nM
    345683 5fg5:B (1.5) BS01 5XF ? N/A P55201 N/A BindingDB: IC50=50nM, Kd=13nM
    345684 5fg6:A (1.1) BS01 5XE ? N/A O95696 N/A BindingDB: IC50=128nM, Kd=500nM
    345685 5fg7:G (2.7) BS01 MG 3.4.25.1 GO:0000502 ... P21243 26964885
    345686 5fg7:I (2.7) BS01 MG 3.4.25.1 GO:0000502 ... P25451 26964885
    345687 5fg7:K (2.7) BS01 MG 3.4.25.1 GO:0004298 ... P30656 26964885
    345688 5fg7:N (2.7) BS01 MG 3.4.25.1 GO:0000502 ... P38624 26964885
    345689 5fg7:V (2.7) BS01 MG 3.4.25.1 GO:0000502 ... P25043 26964885
    345690 5fg7:W (2.7) BS01 MG 3.4.25.1 GO:0000502 ... P25451 26964885
    345691 5fg7:Y (2.7) BS01 MG 3.4.25.1 GO:0004298 ... P30656 26964885
    345692 5fg7:Z (2.7) BS01 MG 3.4.25.1 GO:0000502 ... P23724 26964885
    345693 5fg8:A (1.955) BS01 peptide 2.7.11.17 GO:0004672 ... Q00168 30381148
    345694 5fg8:A (1.955) BS02 ADP 2.7.11.17 GO:0004672 ... Q00168 30381148
    345695 5fg8:A (1.955) BS03 MG 2.7.11.17 GO:0004672 ... Q00168 30381148
    345696 5fg9:G (2.6) BS01 MG 3.4.25.1 GO:0000502 ... P21243 26964885
    345697 5fg9:I (2.6) BS01 MG 3.4.25.1 GO:0000502 ... P25451 26964885
    345698 5fg9:J (2.6) BS01 MG 3.4.25.1 GO:0000502 ... P22141 26964885
    345699 5fg9:K (2.6) BS01 MG 3.4.25.1 GO:0004298 ... P30656 26964885
    345700 5fg9:N (2.6) BS01 MG 3.4.25.1 GO:0000502 ... P38624 26964885
    345701 5fg9:V (2.6) BS01 MG 3.4.25.1 GO:0000502 ... P25043 26964885
    345702 5fg9:Y (2.6) BS01 MG 3.4.25.1 GO:0004298 ... P30656 26964885
    345703 5fg9:Z (2.6) BS01 MG 3.4.25.1 GO:0000502 ... P23724 26964885
    345704 5fga:G (2.7) BS01 MG 3.4.25.1 GO:0000502 ... P21243 26964885
    345705 5fga:K (2.7) BS01 MG 3.4.25.1 GO:0004298 ... P30656 26964885
    345706 5fga:V (2.7) BS01 MG 3.4.25.1 GO:0004298 ... P25043 26964885
    345707 5fga:W (2.7) BS01 MG 3.4.25.1 GO:0000502 ... P25451 26964885
    345708 5fga:Y (2.7) BS01 MG 3.4.25.1 GO:0004298 ... P30656 26964885
    345709 5fga:Z (2.7) BS01 MG 3.4.25.1 GO:0000502 ... P23724 26964885
    345710 5fgb:A (1.65) BS01 peptide N/A N/A N/A 26739044
    345711 5fgb:B (1.65) BS01 peptide N/A N/A N/A 26739044
    345712 5fgb:C (1.65) BS01 peptide N/A N/A N/A 26739044
    345713 5fgb:E (1.65) BS01 peptide N/A N/A N/A 26739044
    345714 5fgc:B (1.9) BS01 peptide N/A N/A N/A 26739044
    345715 5fgc:E (1.9) BS01 peptide N/A N/A N/A 26739044
    345716 5fgd:G (2.8) BS01 MG 3.4.25.1 GO:0000502 ... P21243 26964885
    345717 5fgd:H (2.8) BS01 3BV 3.4.25.1 GO:0004298 ... P25043 26964885
    345718 5fgd:H (2.8) BS02 3BV 3.4.25.1 GO:0004298 ... P25043 26964885
    345719 5fgd:K (2.8) BS01 MG 3.4.25.1 GO:0004298 ... P30656 26964885
    345720 5fgd:N (2.8) BS01 3BV 3.4.25.1 GO:0000502 ... P38624 26964885
    345721 5fgd:V (2.8) BS01 MG 3.4.25.1 GO:0004298 ... P25043 26964885
    345722 5fgd:V (2.8) BS02 3BV 3.4.25.1 GO:0004298 ... P25043 26964885
    345723 5fgd:V (2.8) BS03 3BV 3.4.25.1 GO:0004298 ... P25043 26964885
    345724 5fgd:W (2.8) BS01 3BV 3.4.25.1 GO:0000502 ... P25451 26964885
    345725 5fgd:Y (2.8) BS01 MG 3.4.25.1 GO:0004298 ... P30656 26964885
    345726 5fgd:Z (2.8) BS01 MG 3.4.25.1 GO:0000502 ... P23724 26964885
    345727 5fgd:b (2.8) BS01 3BV 3.4.25.1 GO:0000502 ... P38624 26964885
    345728 5fge:G (2.6) BS01 MG 3.4.25.1 GO:0000502 ... P21243 26964885
    345729 5fge:H (2.6) BS01 3BV 3.4.25.1 GO:0004298 ... P25043 26964885
    345730 5fge:H (2.6) BS02 3BV 3.4.25.1 GO:0004298 ... P25043 26964885
    345731 5fge:I (2.6) BS01 MG 3.4.25.1 GO:0000502 ... P25451 26964885
    345732 5fge:K (2.6) BS01 MG 3.4.25.1 GO:0004298 ... P30656 26964885
    345733 5fge:N (2.6) BS01 3BV 3.4.25.1 GO:0000502 ... P38624 26964885
    345734 5fge:N (2.6) BS02 MG 3.4.25.1 GO:0000502 ... P38624 26964885
    345735 5fge:V (2.6) BS01 MG 3.4.25.1 GO:0004298 ... P25043 26964885
    345736 5fge:V (2.6) BS02 3BV 3.4.25.1 GO:0004298 ... P25043 26964885
    345737 5fge:V (2.6) BS03 3BV 3.4.25.1 GO:0004298 ... P25043 26964885
    345738 5fge:Y (2.6) BS01 MG 3.4.25.1 GO:0004298 ... P30656 26964885
    345739 5fge:Z (2.6) BS01 MG 3.4.25.1 GO:0000502 ... P23724 26964885
    345740 5fge:b (2.6) BS01 3BV 3.4.25.1 GO:0000502 ... P38624 26964885
    345741 5fgf:G (2.6) BS01 MG 3.4.25.1 GO:0000502 ... P21243 26964885
    345742 5fgf:H (2.6) BS01 3BV 3.4.25.1 GO:0004298 ... P25043 26964885
    345743 5fgf:H (2.6) BS02 3BV 3.4.25.1 GO:0004298 ... P25043 26964885
    345744 5fgf:I (2.6) BS01 3BV 3.4.25.1 GO:0000502 ... P25451 26964885
    345745 5fgf:I (2.6) BS02 MG 3.4.25.1 GO:0000502 ... P25451 26964885
    345746 5fgf:K (2.6) BS01 MG 3.4.25.1 GO:0004298 ... P30656 26964885
    345747 5fgf:N (2.6) BS01 3BV 3.4.25.1 GO:0000502 ... P38624 26964885
    345748 5fgf:N (2.6) BS02 MG 3.4.25.1 GO:0000502 ... P38624 26964885
    345749 5fgf:V (2.6) BS01 MG 3.4.25.1 GO:0004298 ... P25043 26964885
    345750 5fgf:V (2.6) BS02 3BV 3.4.25.1 GO:0004298 ... P25043 26964885
    345751 5fgf:V (2.6) BS03 3BV 3.4.25.1 GO:0004298 ... P25043 26964885
    345752 5fgf:W (2.6) BS01 3BV 3.4.25.1 GO:0000502 ... P25451 26964885
    345753 5fgf:Y (2.6) BS01 MG 3.4.25.1 GO:0004298 ... P30656 26964885
    345754 5fgf:Z (2.6) BS01 MG 3.4.25.1 GO:0000502 ... P23724 26964885
    345755 5fgf:Z (2.6) BS02 MG 3.4.25.1 GO:0000502 ... P23724 26964885
    345756 5fgf:b (2.6) BS01 3BV 3.4.25.1 GO:0000502 ... P38624 26964885
    345757 5fgf:b (2.6) BS02 MG 3.4.25.1 GO:0000502 ... P38624 26964885
    345758 5fgg:G (2.7) BS01 MG 3.4.25.1 GO:0000502 ... P21243 26964885
    345759 5fgg:H (2.7) BS01 3BV 3.4.25.1 GO:0004298 ... P25043 26964885
    345760 5fgg:H (2.7) BS02 3BV 3.4.25.1 GO:0004298 ... P25043 26964885
    345761 5fgg:K (2.7) BS01 3BV 3.4.25.1 GO:0004298 ... P30656 26964885
    345762 5fgg:K (2.7) BS02 MG 3.4.25.1 GO:0004298 ... P30656 26964885
    345763 5fgg:L (2.7) BS01 3BV 3.4.25.1 GO:0000502 ... P23724 26964885
    345764 5fgg:N (2.7) BS01 3BV 3.4.25.1 GO:0000502 ... P38624 26964885
    345765 5fgg:N (2.7) BS02 MG 3.4.25.1 GO:0000502 ... P38624 26964885
    345766 5fgg:V (2.7) BS01 MG 3.4.25.1 GO:0004298 ... P25043 26964885
    345767 5fgg:V (2.7) BS02 3BV 3.4.25.1 GO:0004298 ... P25043 26964885
    345768 5fgg:V (2.7) BS03 3BV 3.4.25.1 GO:0004298 ... P25043 26964885
    345769 5fgg:W (2.7) BS01 3BV 3.4.25.1 GO:0000502 ... P25451 26964885
    345770 5fgg:Y (2.7) BS01 MG 3.4.25.1 GO:0004298 ... P30656 26964885
    345771 5fgg:Y (2.7) BS02 3BV 3.4.25.1 GO:0004298 ... P30656 26964885
    345772 5fgg:Z (2.7) BS01 3BV 3.4.25.1 GO:0000502 ... P23724 26964885
    345773 5fgg:Z (2.7) BS02 MG 3.4.25.1 GO:0000502 ... P23724 26964885
    345774 5fgg:b (2.7) BS01 3BV 3.4.25.1 GO:0000502 ... P38624 26964885
    345775 5fgg:b (2.7) BS02 MG 3.4.25.1 GO:0000502 ... P38624 26964885
    345776 5fgh:G (2.8) BS01 MG 3.4.25.1 GO:0000502 ... P21243 26964885
    345777 5fgh:H (2.8) BS01 ALD 3.4.25.1 GO:0004298 ... P25043 26964885
    345778 5fgh:K (2.8) BS01 MG 3.4.25.1 GO:0004298 ... P30656 26964885
    345779 5fgh:K (2.8) BS02 ALD 3.4.25.1 GO:0004298 ... P30656 26964885
    345780 5fgh:N (2.8) BS01 MG 3.4.25.1 GO:0000502 ... P38624 26964885
    345781 5fgh:N (2.8) BS02 ALD 3.4.25.1 GO:0000502 ... P38624 26964885
    345782 5fgh:V (2.8) BS01 MG 3.4.25.1 GO:0004298 ... P25043 26964885
    345783 5fgh:V (2.8) BS02 ALD 3.4.25.1 GO:0004298 ... P25043 26964885
    345784 5fgh:Y (2.8) BS01 MG 3.4.25.1 GO:0004298 ... P30656 26964885
    345785 5fgh:Y (2.8) BS02 ALD 3.4.25.1 GO:0004298 ... P30656 26964885
    345786 5fgh:Z (2.8) BS01 MG 3.4.25.1 GO:0000502 ... P23724 26964885
    345787 5fgh:b (2.8) BS01 ALD 3.4.25.1 GO:0000502 ... P38624 26964885
    345788 5fgi:G (2.9) BS01 MG 3.4.25.1 GO:0000502 ... P21243 26964885
    345789 5fgi:I (2.9) BS01 MG 3.4.25.1 GO:0000502 ... P25451 26964885
    345790 5fgi:K (2.9) BS01 3BV 3.4.25.1 GO:0004298 ... P30656 26964885
    345791 5fgi:K (2.9) BS02 MG 3.4.25.1 GO:0004298 ... P30656 26964885
    345792 5fgi:L (2.9) BS01 3BV 3.4.25.1 GO:0000502 ... P23724 26964885
    345793 5fgi:N (2.9) BS01 MG 3.4.25.1 GO:0000502 ... P38624 26964885
    345794 5fgi:Y (2.9) BS01 MG 3.4.25.1 GO:0004298 ... P30656 26964885
    345795 5fgi:Y (2.9) BS02 3BV 3.4.25.1 GO:0004298 ... P30656 26964885
    345796 5fgi:Z (2.9) BS01 3BV 3.4.25.1 GO:0000502 ... P23724 26964885
    345797 5fgi:Z (2.9) BS02 MG 3.4.25.1 GO:0000502 ... P23724 26964885
    345798 5fgj:A (3.6) BS01 FE 1.14.16.1 GO:0004497 ... P04176 27145334
    345799 5fgj:B (3.6) BS01 FE 1.14.16.1 GO:0004497 ... P04176 27145334
    345800 5fgj:C (3.6) BS01 FE 1.14.16.1 GO:0004497 ... P04176 27145334

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).