SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    348201 5g2q:J (2.3) BS01 PDA 2.6.1.- GO:0005829 ... A0A1C7D191 27428867
    348202 5g2q:J (2.3) BS02 PDA 2.6.1.- GO:0005829 ... A0A1C7D191 27428867
    348203 5g2q:K (2.3) BS01 PDA 2.6.1.- GO:0005829 ... A0A1C7D191 27428867
    348204 5g2q:K (2.3) BS02 PDA 2.6.1.- GO:0005829 ... A0A1C7D191 27428867
    348205 5g2q:L (2.3) BS01 PDA 2.6.1.- GO:0005829 ... A0A1C7D191 27428867
    348206 5g2s:A (2.838) BS01 MOO 2.10.1.1
    2.7.7.75
    GO:0006777 ... Q39054 27803248
    348207 5g2t:A (1.9) BS01 UAP 3.1.6.- GO:0004065 ... Q8A7C8 28630303
    348208 5g2t:A (1.9) BS02 ZN 3.1.6.- GO:0004065 ... Q8A7C8 28630303
    348209 5g2t:B (1.9) BS01 SGN 3.1.6.- GO:0004065 ... Q8A7C8 28630303
    348210 5g2t:B (1.9) BS02 UAP 3.1.6.- GO:0004065 ... Q8A7C8 28630303
    348211 5g2t:B (1.9) BS03 ZN 3.1.6.- GO:0004065 ... Q8A7C8 28630303
    348212 5g2t:C (1.9) BS01 ZN 3.1.6.- GO:0004065 ... Q8A7C8 28630303
    348213 5g2t:C (1.9) BS02 UAP 3.1.6.- GO:0004065 ... Q8A7C8 28630303
    348214 5g2t:D (1.9) BS01 ZN 3.1.6.- GO:0004065 ... Q8A7C8 28630303
    348215 5g2t:D (1.9) BS02 UAP 3.1.6.- GO:0004065 ... Q8A7C8 28630303
    348216 5g2u:A (1.43) BS01 ZN 3.1.6.- GO:0004065 ... Q8A7C8 28630303
    348217 5g2v:A (1.39) BS01 CA 3.1.6.- GO:0016787 ... Q89YS5 28630303
    348218 5g2v:A (1.39) BS02 SGN 3.1.6.- GO:0016787 ... Q89YS5 28630303
    348219 5g2x:C (3.8) BS01 rna 2.7.7.49
    3.1.-.-
    GO:0003720 ... P0A3U0 27136327
    348220 5g2x:C (3.8) BS02 rna 2.7.7.49
    3.1.-.-
    GO:0003720 ... P0A3U0 27136327
    348221 5g31:A (2.0) BS01 ZN 1.8.1.9 GO:0015035 ... B1PWB9 28375144
    348222 5g32:A (2.2) BS01 dna ? GO:0003684 ... P28519 27223336
    348223 5g32:A (2.2) BS02 dna ? GO:0003684 ... P28519 27223336
    348224 5g32:A (2.2) BS03 dna ? GO:0003684 ... P28519 27223336
    348225 5g32:A (2.2) BS04 dna ? GO:0003684 ... P28519 27223336
    348226 5g32:A (2.2) BS05 ZN ? GO:0003684 ... P28519 27223336
    348227 5g32:B (2.2) BS01 dna ? GO:0003684 ... P28519 27223336
    348228 5g32:B (2.2) BS02 dna ? GO:0003684 ... P28519 27223336
    348229 5g32:B (2.2) BS03 dna ? GO:0003684 ... P28519 27223336
    348230 5g32:B (2.2) BS04 dna ? GO:0003684 ... P28519 27223336
    348231 5g32:B (2.2) BS05 ZN ? GO:0003684 ... P28519 27223336
    348232 5g33:A (2.4) BS01 dna ? GO:0003684 ... P28519 27223336
    348233 5g33:A (2.4) BS02 dna ? GO:0003684 ... P28519 27223336
    348234 5g33:A (2.4) BS03 dna ? GO:0003684 ... P28519 27223336
    348235 5g33:A (2.4) BS04 dna ? GO:0003684 ... P28519 27223336
    348236 5g33:A (2.4) BS05 ZN ? GO:0003684 ... P28519 27223336
    348237 5g33:B (2.4) BS01 dna ? GO:0003684 ... P28519 27223336
    348238 5g33:B (2.4) BS02 dna ? GO:0003684 ... P28519 27223336
    348239 5g33:B (2.4) BS03 dna ? GO:0003684 ... P28519 27223336
    348240 5g33:B (2.4) BS04 dna ? GO:0003684 ... P28519 27223336
    348241 5g33:B (2.4) BS05 ZN ? GO:0003684 ... P28519 27223336
    348242 5g34:A (1.9) BS01 dna ? GO:0003684 ... P28519 27223336
    348243 5g34:A (1.9) BS02 dna ? GO:0003684 ... P28519 27223336
    348244 5g34:A (1.9) BS03 dna ? GO:0003684 ... P28519 27223336
    348245 5g34:A (1.9) BS04 dna ? GO:0003684 ... P28519 27223336
    348246 5g34:A (1.9) BS05 ZN ? GO:0003684 ... P28519 27223336
    348247 5g34:B (1.9) BS01 dna ? GO:0003684 ... P28519 27223336
    348248 5g34:B (1.9) BS02 dna ? GO:0003684 ... P28519 27223336
    348249 5g34:B (1.9) BS03 dna ? GO:0003684 ... P28519 27223336
    348250 5g34:B (1.9) BS04 dna ? GO:0003684 ... P28519 27223336
    348251 5g34:B (1.9) BS05 ZN ? GO:0003684 ... P28519 27223336
    348252 5g35:A (2.0) BS01 dna ? GO:0003684 ... P28519 27223336
    348253 5g35:A (2.0) BS02 dna ? GO:0003684 ... P28519 27223336
    348254 5g35:A (2.0) BS03 dna ? GO:0003684 ... P28519 27223336
    348255 5g35:A (2.0) BS04 dna ? GO:0003684 ... P28519 27223336
    348256 5g35:A (2.0) BS05 ZN ? GO:0003684 ... P28519 27223336
    348257 5g35:B (2.0) BS01 dna ? GO:0003684 ... P28519 27223336
    348258 5g35:B (2.0) BS02 dna ? GO:0003684 ... P28519 27223336
    348259 5g35:B (2.0) BS03 dna ? GO:0003684 ... P28519 27223336
    348260 5g35:B (2.0) BS04 dna ? GO:0003684 ... P28519 27223336
    348261 5g35:B (2.0) BS05 ZN ? GO:0003684 ... P28519 27223336
    348262 5g36:A (2.6) BS01 RET ? GO:0005216 ... B0R2U4 27599860
    348263 5g36:A (2.6) BS02 CL ? GO:0005216 ... B0R2U4 27599860
    348264 5g38:A (1.15) BS01 CA ? GO:0009654 ... P0A432 27454911
    348265 5g39:A (1.5) BS01 CA ? GO:0009654 ... P0A432 27454911
    348266 5g3a:A (1.224) BS01 CA ? GO:0009654 ... P0A432 27454911
    348267 5g3b:A (1.69) BS01 CU 1.10.3.2 GO:0005507 ... Q72HW2 N/A
    348268 5g3b:A (1.69) BS02 CU 1.10.3.2 GO:0005507 ... Q72HW2 N/A
    348269 5g3b:A (1.69) BS03 CU 1.10.3.2 GO:0005507 ... Q72HW2 N/A
    348270 5g3c:A (1.75) BS01 CU 1.10.3.2 GO:0005507 ... I7AL37 N/A
    348271 5g3c:A (1.75) BS02 CU 1.10.3.2 GO:0005507 ... I7AL37 N/A
    348272 5g3c:A (1.75) BS03 CU 1.10.3.2 GO:0005507 ... I7AL37 N/A
    348273 5g3d:A (1.78) BS01 CU 1.10.3.2 GO:0005507 ... Q72HW2 N/A
    348274 5g3d:A (1.78) BS02 CU 1.10.3.2 GO:0005507 ... Q72HW2 N/A
    348275 5g3d:A (1.78) BS03 CU 1.10.3.2 GO:0005507 ... Q72HW2 N/A
    348276 5g3e:A (1.78) BS01 CU 1.10.3.2 GO:0005507 ... Q72HW2 N/A
    348277 5g3e:A (1.78) BS02 CU 1.10.3.2 GO:0005507 ... Q72HW2 N/A
    348278 5g3e:A (1.78) BS03 CU 1.10.3.2 GO:0005507 ... Q72HW2 N/A
    348279 5g3f:A (1.82) BS01 CU 1.10.3.2 GO:0005507 ... Q72HW2 N/A
    348280 5g3f:A (1.82) BS02 CU 1.10.3.2 GO:0005507 ... Q72HW2 N/A
    348281 5g3f:A (1.82) BS03 CU 1.10.3.2 GO:0005507 ... Q72HW2 N/A
    348282 5g3g:A (1.84) BS01 CU 1.10.3.2 GO:0005507 ... I7AL37 N/A
    348283 5g3g:A (1.84) BS02 CU 1.10.3.2 GO:0005507 ... I7AL37 N/A
    348284 5g3g:A (1.84) BS03 CU 1.10.3.2 GO:0005507 ... I7AL37 N/A
    348285 5g3h:A (1.93) BS01 CU 1.10.3.2 GO:0005507 ... I7AL37 N/A
    348286 5g3h:A (1.93) BS02 CU 1.10.3.2 GO:0005507 ... I7AL37 N/A
    348287 5g3h:A (1.93) BS03 CU 1.10.3.2 GO:0005507 ... I7AL37 N/A
    348288 5g3j:A (2.4) BS01 peptide ? N/A P04150 28043796
    348289 5g3j:A (2.4) BS02 E7T ? N/A P04150 28043796 MOAD: ic50=63nM
    BindingDB: IC50=6.3nM
    348290 5g3l:D (1.72) BS01 SIA ? GO:0005576 ... P43529 27562297
    348291 5g3l:D (1.72) BS02 SIA ? GO:0005576 ... P43529 27562297
    348292 5g3l:E (1.72) BS01 SIA ? GO:0005576 ... P43529 27562297
    348293 5g3l:E (1.72) BS02 SIA ? GO:0005576 ... P43529 27562297
    348294 5g3l:F (1.72) BS01 SIA ? GO:0005576 ... P43529 27562297
    348295 5g3l:G (1.72) BS01 SIA ? GO:0005576 ... P43529 27562297
    348296 5g3l:G (1.72) BS02 SIA ? GO:0005576 ... P43529 27562297
    348297 5g3l:H (1.72) BS01 SIA ? GO:0005576 ... P43529 27562297
    348298 5g3m:A (1.85) BS01 CA 3.1.1.4 GO:0001516 ... O15496 27774123
    348299 5g3m:A (1.85) BS02 9JH 3.1.1.4 GO:0001516 ... O15496 27774123 MOAD: ic50=2.2uM
    BindingDB: IC50=2200nM
    348300 5g3m:B (1.85) BS01 CA 3.1.1.4 GO:0001516 ... O15496 27774123
    348301 5g3m:B (1.85) BS02 9JH 3.1.1.4 GO:0001516 ... O15496 27774123 MOAD: ic50=2.2uM
    BindingDB: IC50=2200nM
    348302 5g3n:A (1.8) BS01 CA 3.1.1.4 GO:0004623 ... P14555 27774123
    348303 5g3n:A (1.8) BS02 CA 3.1.1.4 GO:0004623 ... P14555 27774123
    348304 5g3n:A (1.8) BS03 X28 3.1.1.4 GO:0004623 ... P14555 27774123 MOAD: ic50=0.012uM
    BindingDB: IC50=12nM
    348305 5g3n:B (1.8) BS01 CA 3.1.1.4 GO:0004623 ... P14555 27774123
    348306 5g3n:B (1.8) BS02 CA 3.1.1.4 GO:0004623 ... P14555 27774123
    348307 5g3n:B (1.8) BS03 X28 3.1.1.4 GO:0004623 ... P14555 27774123 MOAD: ic50=0.012uM
    BindingDB: IC50=12nM
    348308 5g3r:A (2.18) BS01 89A 3.2.1.52 GO:0004553 ... Q9HZK0 28482153
    348309 5g3r:B (2.18) BS01 89A 3.2.1.52 GO:0004553 ... Q9HZK0 28482153
    348310 5g3s:A (2.076) BS01 FDA 1.4.3.23 GO:0016491 ... Q9S3V1 27466367
    348311 5g3s:B (2.076) BS01 FDA 1.4.3.23 GO:0016491 ... Q9S3V1 27466367
    348312 5g3t:A (1.8) BS01 FDA 1.4.3.23 GO:0016491 ... Q9S3V1 27466367
    348313 5g3t:A (1.8) BS02 MG 1.4.3.23 GO:0016491 ... Q9S3V1 27466367
    348314 5g3t:B (1.8) BS01 FDA 1.4.3.23 GO:0016491 ... Q9S3V1 27466367
    348315 5g3t:B (1.8) BS02 MG 1.4.3.23 GO:0016491 ... Q9S3V1 27466367
    348316 5g3t:B (1.8) BS03 MG 1.4.3.23 GO:0016491 ... Q9S3V1 27466367
    348317 5g3t:C (1.8) BS01 FDA 1.4.3.23 GO:0016491 ... Q9S3V1 27466367
    348318 5g3t:D (1.8) BS01 FDA 1.4.3.23 GO:0016491 ... Q9S3V1 27466367
    348319 5g3t:D (1.8) BS02 MG 1.4.3.23 GO:0016491 ... Q9S3V1 27466367
    348320 5g3t:D (1.8) BS03 MG 1.4.3.23 GO:0016491 ... Q9S3V1 27466367
    348321 5g3u:A (2.377) BS01 FDA 1.4.3.23 GO:0016491 ... Q9S3V1 27466367
    348322 5g3u:A (2.377) BS02 ITW 1.4.3.23 GO:0016491 ... Q9S3V1 27466367 MOAD: Kd=42.6uM
    348323 5g3u:B (2.377) BS01 FDA 1.4.3.23 GO:0016491 ... Q9S3V1 27466367
    348324 5g3u:B (2.377) BS02 ITW 1.4.3.23 GO:0016491 ... Q9S3V1 27466367 MOAD: Kd=42.6uM
    348325 5g3w:A (1.6) BS01 ZN 3.5.1.- GO:0004407 ... Q70I53 27756124
    348326 5g3w:A (1.6) BS02 C65 3.5.1.- GO:0004407 ... Q70I53 27756124
    348327 5g3w:B (1.6) BS01 ZN 3.5.1.- GO:0004407 ... Q70I53 27756124
    348328 5g3w:B (1.6) BS02 C65 3.5.1.- GO:0004407 ... Q70I53 27756124
    348329 5g3w:C (1.6) BS01 ZN 3.5.1.- GO:0004407 ... Q70I53 27756124
    348330 5g3w:C (1.6) BS02 C65 3.5.1.- GO:0004407 ... Q70I53 27756124
    348331 5g3w:D (1.6) BS01 ZN 3.5.1.- GO:0004407 ... Q70I53 27756124
    348332 5g3w:D (1.6) BS02 C65 3.5.1.- GO:0004407 ... Q70I53 27756124
    348333 5g3y:A (1.18) BS01 ZN N/A GO:0004017 ... N/A 28008087
    348334 5g3y:A (1.18) BS02 ADP N/A GO:0004017 ... N/A 28008087
    348335 5g3y:A (1.18) BS03 ADP N/A GO:0004017 ... N/A 28008087
    348336 5g3z:A (1.89) BS01 ZN N/A GO:0004017 ... N/A 28008087
    348337 5g3z:A (1.89) BS02 AP5 N/A GO:0004017 ... N/A 28008087
    348338 5g40:A (1.69) BS01 ZN N/A GO:0004017 ... N/A 28008087
    348339 5g40:A (1.69) BS02 ADP N/A GO:0004017 ... N/A 28008087
    348340 5g40:A (1.69) BS03 AMP N/A GO:0004017 ... N/A 28008087
    348341 5g41:A (1.54) BS01 ZN N/A GO:0004017 ... N/A 28008087
    348342 5g41:A (1.54) BS02 AP5 N/A GO:0004017 ... N/A 28008087
    348343 5g42:A (1.72) BS01 peptide ? GO:0003677 ... P51449 27432277
    348344 5g42:A (1.72) BS02 4TU ? GO:0003677 ... P51449 27432277
    348345 5g43:A (2.58) BS01 peptide ? GO:0003677 ... P51449 27432277
    348346 5g43:A (2.58) BS02 5IM ? GO:0003677 ... P51449 27432277
    348347 5g44:A (1.84) BS01 peptide ? GO:0003677 ... P51449 27432277
    348348 5g44:A (1.84) BS02 I6G ? GO:0003677 ... P51449 27432277
    348349 5g44:A (1.84) BS03 YTZ ? GO:0003677 ... P51449 27432277
    348350 5g45:A (2.07) BS01 peptide ? GO:0003677 ... P51449 27432277
    348351 5g45:A (2.07) BS02 A7W ? GO:0003677 ... P51449 27432277 MOAD: Kd=500uM
    348352 5g46:A (1.76) BS01 peptide ? GO:0003677 ... P51449 27432277
    348353 5g46:A (1.76) BS02 6VD ? GO:0003677 ... P51449 27432277 MOAD: Kd=2.5mM
    348354 5g48:A (2.28) BS01 1FL ? GO:0003677 ... O25242 28656718
    348355 5g48:B (2.28) BS01 1FL ? GO:0003677 ... O25242 28656718
    348356 5g4a:A (1.9) BS01 MG 2.7.7.47 GO:0005524 ... Q8ZPX9 29871922
    348357 5g4a:A (1.9) BS02 MG 2.7.7.47 GO:0005524 ... Q8ZPX9 29871922
    348358 5g4a:A (1.9) BS03 ATP 2.7.7.47 GO:0005524 ... Q8ZPX9 29871922
    348359 5g4a:B (1.9) BS01 MG 2.7.7.47 GO:0005524 ... Q8ZPX9 29871922
    348360 5g4a:B (1.9) BS02 MG 2.7.7.47 GO:0005524 ... Q8ZPX9 29871922
    348361 5g4a:B (1.9) BS03 ATP 2.7.7.47 GO:0005524 ... Q8ZPX9 29871922
    348362 5g4b:A (2.24) BS01 PZE 3.4.21.90 GO:0004252 ... Q86925 N/A
    348363 5g4c:A (2.1) BS01 peptide 2.3.1.-
    2.3.1.286
    GO:0017136 ... Q8IXJ6 27610633
    348364 5g4c:A (2.1) BS02 ZN 2.3.1.-
    2.3.1.286
    GO:0017136 ... Q8IXJ6 27610633
    348365 5g4c:A (2.1) BS03 CNA 2.3.1.-
    2.3.1.286
    GO:0017136 ... Q8IXJ6 27610633
    348366 5g4c:B (2.1) BS01 peptide 2.3.1.-
    2.3.1.286
    GO:0017136 ... Q8IXJ6 27610633
    348367 5g4c:B (2.1) BS02 CNA 2.3.1.-
    2.3.1.286
    GO:0017136 ... Q8IXJ6 27610633
    348368 5g4i:A (1.5) BS01 PLP 4.2.3.2 GO:0008483 ... A1RDF1 27709756
    348369 5g4i:A (1.5) BS02 PO4 4.2.3.2 GO:0008483 ... A1RDF1 27709756
    348370 5g4i:B (1.5) BS01 PLP 4.2.3.2 GO:0008483 ... A1RDF1 27709756
    348371 5g4i:B (1.5) BS02 PO4 4.2.3.2 GO:0008483 ... A1RDF1 27709756
    348372 5g4i:B (1.5) BS03 PO4 4.2.3.2 GO:0008483 ... A1RDF1 27709756
    348373 5g4j:A (1.87) BS01 EXT 4.2.3.2 GO:0008483 ... A1RDF1 27709756
    348374 5g4j:A (1.87) BS02 EXT 4.2.3.2 GO:0008483 ... A1RDF1 27709756
    348375 5g4j:B (1.87) BS01 EXT 4.2.3.2 GO:0008483 ... A1RDF1 27709756
    348376 5g4j:B (1.87) BS02 EXT 4.2.3.2 GO:0008483 ... A1RDF1 27709756
    348377 5g4l:A (1.8) BS01 NDP N/A GO:0016491 ... N/A 27874239
    348378 5g4l:B (1.8) BS01 NDP N/A GO:0016491 ... N/A 27874239
    348379 5g4m:A (1.38) BS01 ZN ? GO:0000976 ... P04637 27267810
    348380 5g4m:A (1.38) BS02 O82 ? GO:0000976 ... P04637 27267810 MOAD: Kd=138uM
    348381 5g4m:B (1.38) BS01 ZN ? GO:0000976 ... P04637 27267810
    348382 5g4m:B (1.38) BS02 O82 ? GO:0000976 ... P04637 27267810 MOAD: Kd=138uM
    348383 5g4n:A (1.35) BS01 ZN ? GO:0000976 ... P04637 27267810
    348384 5g4n:A (1.35) BS02 O83 ? GO:0000976 ... P04637 27267810 MOAD: Kd=101uM
    348385 5g4n:B (1.35) BS01 ZN ? GO:0000976 ... P04637 27267810
    348386 5g4n:B (1.35) BS02 O83 ? GO:0000976 ... P04637 27267810 MOAD: Kd=101uM
    348387 5g4o:A (1.48) BS01 ZN ? GO:0000976 ... P04637 27267810
    348388 5g4o:A (1.48) BS02 O80 ? GO:0000976 ... P04637 27267810 MOAD: Kd=37.2uM
    348389 5g4o:B (1.48) BS01 ZN ? GO:0000976 ... P04637 27267810
    348390 5g4o:B (1.48) BS02 O80 ? GO:0000976 ... P04637 27267810 MOAD: Kd=37.2uM
    348391 5g4p:A (2.42) BS01 CA ? GO:0003779 ... P84074 28398555
    348392 5g4p:A (2.42) BS02 CA ? GO:0003779 ... P84074 28398555
    348393 5g4p:A (2.42) BS03 CA ? GO:0003779 ... P84074 28398555
    348394 5g4p:E (2.42) BS01 CA ? GO:0003779 ... P84074 28398555
    348395 5g4p:E (2.42) BS02 CA ? GO:0003779 ... P84074 28398555
    348396 5g4p:E (2.42) BS03 CA ? GO:0003779 ... P84074 28398555
    348397 5g4q:B (2.3) BS01 2HQ 2.7.7.7 GO:0003677 ... O25242 29324718
    348398 5g4r:A (1.96) BS01 LF1 ? N/A P55201 27326325 MOAD: ic50=7.943nM
    BindingDB: IC50=20nM, Kd=0.316228nM
    348399 5g4r:B (1.96) BS01 LF1 ? N/A P55201 27326325 MOAD: ic50=7.943nM
    BindingDB: IC50=20nM, Kd=0.316228nM
    348400 5g4r:B (1.96) BS02 LF1 ? N/A P55201 27326325 MOAD: ic50=7.943nM
    BindingDB: IC50=20nM, Kd=0.316228nM

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).