SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    348401 5g4r:C (1.96) BS01 LF1 ? N/A P55201 27326325 MOAD: ic50=7.943nM
    BindingDB: IC50=20nM, Kd=0.316228nM
    348402 5g4r:D (1.96) BS01 LF1 ? N/A P55201 27326325 MOAD: ic50=7.943nM
    BindingDB: IC50=20nM, Kd=0.316228nM
    348403 5g4s:A (1.6) BS01 8VI ? N/A P55201 27326325 MOAD: ic50=1uM
    BindingDB: IC50=3981nM
    348404 5g4u:C (2.65) BS01 rna ? GO:0001682 ... O29494 27506301
    348405 5g4u:C (2.65) BS02 rna ? GO:0001682 ... O29494 27506301
    348406 5g4u:D (2.65) BS01 rna ? GO:0001682 ... O29494 27506301
    348407 5g4u:D (2.65) BS02 rna ? GO:0001682 ... O29494 27506301
    348408 5g4u:G (2.65) BS01 rna ? GO:0001682 ... O29494 27506301
    348409 5g4u:G (2.65) BS02 rna ? GO:0001682 ... O29494 27506301
    348410 5g4u:H (2.65) BS01 rna ? GO:0001682 ... O29494 27506301
    348411 5g4u:H (2.65) BS02 rna ? GO:0001682 ... O29494 27506301
    348412 5g4u:K (2.65) BS01 rna ? GO:0001682 ... O29494 27506301
    348413 5g4u:K (2.65) BS02 rna ? GO:0001682 ... O29494 27506301
    348414 5g4u:L (2.65) BS01 rna ? GO:0001682 ... O29494 27506301
    348415 5g4u:L (2.65) BS02 rna ? GO:0001682 ... O29494 27506301
    348416 5g4v:C (2.87) BS01 rna ? GO:0001682 ... O29494 27506301
    348417 5g4v:C (2.87) BS02 rna ? GO:0001682 ... O29494 27506301
    348418 5g4v:D (2.87) BS01 rna ? GO:0001682 ... O29494 27506301
    348419 5g4v:D (2.87) BS02 rna ? GO:0001682 ... O29494 27506301
    348420 5g4v:G (2.87) BS01 rna ? GO:0001682 ... O29494 27506301
    348421 5g4v:G (2.87) BS02 rna ? GO:0001682 ... O29494 27506301
    348422 5g4v:H (2.87) BS01 rna ? GO:0001682 ... O29494 27506301
    348423 5g4v:H (2.87) BS02 rna ? GO:0001682 ... O29494 27506301
    348424 5g4w:A (2.3) BS01 GUO 5.3.1.16 GO:0000105 ... P10372 28416687
    348425 5g50:A (2.3) BS01 MG ? GO:0046872 ... C3LTH7 N/A
    348426 5g53:A (3.4) BS01 NEC ? GO:0001609 ... P29274 27462812 BindingDB: Ki=16nM, IC50=3.7nM, EC50=251nM
    348427 5g53:B (3.4) BS01 NEC ? GO:0001609 ... P29274 27462812 BindingDB: Ki=16nM, IC50=3.7nM, EC50=251nM
    348428 5g53:C (3.4) BS01 GDP ? GO:0003924 ... P63092 27462812
    348429 5g54:A (2.0) BS01 CL ? GO:0007602 ... W8VZW3 27554809
    348430 5g54:A (2.0) BS02 RET ? GO:0007602 ... W8VZW3 27554809
    348431 5g55:A (2.45) BS01 3QH 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154
    GO:0016301 ... P48736 27259031
    348432 5g56:A (2.64) BS01 CA ? GO:0000272 ... A3DHG6 27531750
    348433 5g56:A (2.64) BS02 CA ? GO:0000272 ... A3DHG6 27531750
    348434 5g56:A (2.64) BS03 CA ? GO:0000272 ... A3DHG6 27531750
    348435 5g57:A (1.73) BS01 ZN 3.1.4.- GO:0004114 ... Q8WQX9 29672041
    348436 5g57:A (1.73) BS02 6M5 3.1.4.- GO:0004114 ... Q8WQX9 29672041 MOAD: Ki=4nM
    BindingDB: IC50=4.0nM, Ki=4.0nM
    348437 5g57:B (1.73) BS01 6M5 3.1.4.- GO:0004114 ... Q8WQX9 29672041 MOAD: Ki=4nM
    BindingDB: IC50=4.0nM, Ki=4.0nM
    348438 5g57:B (1.73) BS02 ZN 3.1.4.- GO:0004114 ... Q8WQX9 29672041
    348439 5g58:A (2.54) BS01 CA ? GO:0003779 ... P84074 28398555
    348440 5g58:A (2.54) BS02 CA ? GO:0003779 ... P84074 28398555
    348441 5g58:A (2.54) BS03 CA ? GO:0003779 ... P84074 28398555
    348442 5g58:E (2.54) BS01 CA ? GO:0003779 ... P84074 28398555
    348443 5g58:E (2.54) BS02 CA ? GO:0003779 ... P84074 28398555
    348444 5g58:E (2.54) BS03 CA ? GO:0003779 ... P84074 28398555
    348445 5g5a:A (1.95) BS01 GSH 2.5.1.18 GO:0004364 ... Q9SHH7 N/A
    348446 5g5a:A (1.95) BS02 GSH 2.5.1.18 GO:0004364 ... Q9SHH7 N/A
    348447 5g5a:B (1.95) BS01 GSH 2.5.1.18 GO:0004364 ... Q9SHH7 N/A
    348448 5g5a:B (1.95) BS02 GSH 2.5.1.18 GO:0004364 ... Q9SHH7 N/A
    348449 5g5a:C (1.95) BS01 GSH 2.5.1.18 GO:0004364 ... Q9SHH7 N/A
    348450 5g5a:C (1.95) BS02 GSH 2.5.1.18 GO:0004364 ... Q9SHH7 N/A
    348451 5g5a:D (1.95) BS01 GSH 2.5.1.18 GO:0004364 ... Q9SHH7 N/A
    348452 5g5a:D (1.95) BS02 GSH 2.5.1.18 GO:0004364 ... Q9SHH7 N/A
    348453 5g5d:B (3.0) BS01 CA ? GO:0000272 ... Q06851 27924829
    348454 5g5d:B (3.0) BS02 CA ? GO:0000272 ... Q06851 27924829
    348455 5g5f:A (2.3) BS01 GSH 2.5.1.18 GO:0004364 ... A0A1P8NWC2 28104507 MOAD: Kd=5.2uM
    348456 5g5g:A (1.7) BS01 FES 1.2.99.6 GO:0016491 ... P77165 27622978
    348457 5g5g:A (1.7) BS02 FES 1.2.99.6 GO:0016491 ... P77165 27622978
    348458 5g5g:B (1.7) BS01 SF4 1.2.99.6 GO:0005515 ... P77324 27622978
    348459 5g5g:B (1.7) BS02 FAD 1.2.99.6 GO:0005515 ... P77324 27622978
    348460 5g5g:C (1.7) BS01 MCN 1.2.99.6 GO:0005506 ... P77489 27622978
    348461 5g5h:A (2.3) BS01 FES 1.2.99.6 GO:0016491 ... P77165 27622978
    348462 5g5h:A (2.3) BS02 FES 1.2.99.6 GO:0016491 ... P77165 27622978
    348463 5g5h:B (2.3) BS01 SF4 1.2.99.6 GO:0005515 ... P77324 27622978
    348464 5g5h:B (2.3) BS02 FAD 1.2.99.6 GO:0005515 ... P77324 27622978
    348465 5g5h:C (2.3) BS01 MCN 1.2.99.6 GO:0005506 ... P77489 27622978
    348466 5g5j:A (2.6) BS01 MF8 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73
    GO:0002933 ... P08684 28919040
    348467 5g5j:A (2.6) BS02 HEM 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73
    GO:0002933 ... P08684 28919040
    348468 5g5k:A (3.1) BS01 NOK 3.2.1.52 GO:0004553 ... Q9HZK0 28482153 BindingDB: Ki=300nM
    348469 5g5k:B (3.1) BS01 NOK 3.2.1.52 GO:0004553 ... Q9HZK0 28482153 BindingDB: Ki=300nM
    348470 5g5l:A (4.8) BS01 ZN 2.7.7.6 GO:0000428 ... P10964 27418309
    348471 5g5l:A (4.8) BS02 ZN 2.7.7.6 GO:0000428 ... P10964 27418309
    348472 5g5l:B (4.8) BS01 ZN 2.7.7.6 GO:0000428 ... P22138 27418309
    348473 5g5l:I (4.8) BS01 ZN ? GO:0000122 ... P32529 27418309
    348474 5g5l:I (4.8) BS02 ZN ? GO:0000122 ... P32529 27418309
    348475 5g5l:J (4.8) BS01 ZN ? GO:0000428 ... P22139 27418309
    348476 5g5l:L (4.8) BS01 ZN ? GO:0000428 ... P40422 27418309
    348477 5g5m:A (2.07) BS01 QRL ? N/A Q8TZJ1 29307486
    348478 5g5s:A (2.29) BS01 MG 3.1.24.- GO:0003676 ... Q58717 28319084
    348479 5g5t:A (2.85) BS01 dna 3.1.24.- GO:0003676 ... Q58717 28319084
    348480 5g5t:A (2.85) BS02 MG 3.1.24.- GO:0003676 ... Q58717 28319084
    348481 5g5v:A (1.8) BS01 ZN 3.1.4.- GO:0004114 ... Q8WQX9 29672041
    348482 5g5v:A (1.8) BS02 8Z4 3.1.4.- GO:0004114 ... Q8WQX9 29672041 MOAD: Ki=200nM
    BindingDB: Ki=200nM
    348483 5g5v:B (1.8) BS01 ZN 3.1.4.- GO:0004114 ... Q8WQX9 29672041
    348484 5g5w:A (2.2) BS01 peptide ? N/A P04150 27810243
    348485 5g5w:A (2.2) BS02 R8C ? N/A P04150 27810243 MOAD: ic50=0.0027uM
    BindingDB: IC50=0.130000nM
    348486 5g5x:A (2.8) BS01 AMP 3.4.24.85 N/A O29915 28502790
    348487 5g5x:A (2.8) BS02 ATP 3.4.24.85 N/A O29915 28502790
    348488 5g5y:A (1.73) BS01 CA ? GO:0005886 ... A0A0H2URD6 27939783
    348489 5g5y:A (1.73) BS02 CA ? GO:0005886 ... A0A0H2URD6 27939783
    348490 5g5y:A (1.73) BS03 ZN ? GO:0005886 ... A0A0H2URD6 27939783
    348491 5g5y:A (1.73) BS04 ZN ? GO:0005886 ... A0A0H2URD6 27939783
    348492 5g5y:A (1.73) BS05 ZN ? GO:0005886 ... A0A0H2URD6 27939783
    348493 5g5y:A (1.73) BS06 ZN ? GO:0005886 ... A0A0H2URD6 27939783
    348494 5g5y:B (1.73) BS01 CA ? GO:0005886 ... A0A0H2URD6 27939783
    348495 5g5y:B (1.73) BS02 CA ? GO:0005886 ... A0A0H2URD6 27939783
    348496 5g5y:B (1.73) BS03 ZN ? GO:0005886 ... A0A0H2URD6 27939783
    348497 5g5z:A (2.01) BS01 GLC ? GO:0005886 ... A0A0H2URD6 27939783
    348498 5g5z:A (2.01) BS02 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348499 5g5z:A (2.01) BS03 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348500 5g5z:A (2.01) BS04 CA ? GO:0005886 ... A0A0H2URD6 27939783
    348501 5g5z:A (2.01) BS05 CA ? GO:0005886 ... A0A0H2URD6 27939783
    348502 5g5z:B (2.01) BS01 GLC ? GO:0005886 ... A0A0H2URD6 27939783
    348503 5g5z:B (2.01) BS02 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348504 5g5z:B (2.01) BS03 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348505 5g5z:B (2.01) BS04 CA ? GO:0005886 ... A0A0H2URD6 27939783
    348506 5g5z:B (2.01) BS05 CA ? GO:0005886 ... A0A0H2URD6 27939783
    348507 5g5z:C (2.01) BS01 GLC ? GO:0005886 ... A0A0H2URD6 27939783
    348508 5g5z:C (2.01) BS02 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348509 5g5z:C (2.01) BS03 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348510 5g5z:C (2.01) BS04 CA ? GO:0005886 ... A0A0H2URD6 27939783
    348511 5g5z:C (2.01) BS05 CA ? GO:0005886 ... A0A0H2URD6 27939783
    348512 5g5z:D (2.01) BS01 GLC ? GO:0005886 ... A0A0H2URD6 27939783
    348513 5g5z:D (2.01) BS02 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348514 5g5z:D (2.01) BS03 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348515 5g5z:D (2.01) BS04 CA ? GO:0005886 ... A0A0H2URD6 27939783
    348516 5g5z:D (2.01) BS05 CA ? GO:0005886 ... A0A0H2URD6 27939783
    348517 5g60:A (1.99) BS01 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348518 5g60:A (1.99) BS02 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348519 5g60:A (1.99) BS03 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348520 5g60:A (1.99) BS04 CA ? GO:0005886 ... A0A0H2URD6 27939783
    348521 5g60:A (1.99) BS05 CA ? GO:0005886 ... A0A0H2URD6 27939783
    348522 5g60:B (1.99) BS01 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348523 5g60:B (1.99) BS02 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348524 5g60:B (1.99) BS03 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348525 5g60:B (1.99) BS04 CA ? GO:0005886 ... A0A0H2URD6 27939783
    348526 5g60:B (1.99) BS05 CA ? GO:0005886 ... A0A0H2URD6 27939783
    348527 5g60:C (1.99) BS01 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348528 5g60:C (1.99) BS02 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348529 5g60:C (1.99) BS03 CA ? GO:0005886 ... A0A0H2URD6 27939783
    348530 5g60:C (1.99) BS04 CA ? GO:0005886 ... A0A0H2URD6 27939783
    348531 5g60:D (1.99) BS01 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348532 5g60:D (1.99) BS02 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348533 5g60:D (1.99) BS03 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348534 5g60:D (1.99) BS04 CA ? GO:0005886 ... A0A0H2URD6 27939783
    348535 5g60:D (1.99) BS05 CA ? GO:0005886 ... A0A0H2URD6 27939783
    348536 5g61:A (2.4) BS01 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348537 5g61:A (2.4) BS02 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348538 5g61:A (2.4) BS03 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348539 5g61:A (2.4) BS04 CA ? GO:0005886 ... A0A0H2URD6 27939783
    348540 5g61:A (2.4) BS05 CA ? GO:0005886 ... A0A0H2URD6 27939783
    348541 5g61:B (2.4) BS01 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348542 5g61:B (2.4) BS02 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348543 5g61:B (2.4) BS03 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348544 5g61:B (2.4) BS04 CA ? GO:0005886 ... A0A0H2URD6 27939783
    348545 5g61:B (2.4) BS05 CA ? GO:0005886 ... A0A0H2URD6 27939783
    348546 5g61:C (2.4) BS01 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348547 5g61:C (2.4) BS02 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348548 5g61:C (2.4) BS03 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348549 5g61:C (2.4) BS04 CA ? GO:0005886 ... A0A0H2URD6 27939783
    348550 5g61:C (2.4) BS05 CA ? GO:0005886 ... A0A0H2URD6 27939783
    348551 5g61:D (2.4) BS01 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348552 5g61:D (2.4) BS02 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348553 5g61:D (2.4) BS03 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348554 5g61:D (2.4) BS04 CA ? GO:0005886 ... A0A0H2URD6 27939783
    348555 5g61:D (2.4) BS05 CA ? GO:0005886 ... A0A0H2URD6 27939783
    348556 5g62:A (1.99) BS01 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348557 5g62:A (1.99) BS02 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348558 5g62:A (1.99) BS03 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348559 5g62:A (1.99) BS04 CA ? GO:0005886 ... A0A0H2URD6 27939783
    348560 5g62:A (1.99) BS05 CA ? GO:0005886 ... A0A0H2URD6 27939783
    348561 5g62:B (1.99) BS01 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348562 5g62:B (1.99) BS02 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348563 5g62:B (1.99) BS03 FRU ? GO:0005886 ... A0A0H2URD6 27939783
    348564 5g62:B (1.99) BS04 CA ? GO:0005886 ... A0A0H2URD6 27939783
    348565 5g65:A (2.03) BS01 HEM 1.14.14.47 GO:0004517 ... O34453 27607918
    348566 5g65:A (2.03) BS02 2AQ 1.14.14.47 GO:0004517 ... O34453 27607918
    348567 5g66:A (1.76) BS01 HEM 1.14.14.47 GO:0004517 ... O34453 27607918
    348568 5g66:A (1.76) BS02 M5K 1.14.14.47 GO:0004517 ... O34453 27607918
    348569 5g67:A (1.97) BS01 HEM 1.14.14.47 GO:0004517 ... O34453 27607918
    348570 5g67:A (1.97) BS02 H4B 1.14.14.47 GO:0004517 ... O34453 27607918
    348571 5g67:A (1.97) BS03 M87 1.14.14.47 GO:0004517 ... O34453 27607918
    348572 5g68:A (1.63) BS01 HEM 1.14.14.47 GO:0004517 ... O34453 27607918
    348573 5g68:A (1.63) BS02 H4B 1.14.14.47 GO:0004517 ... O34453 27607918
    348574 5g68:A (1.63) BS03 ML6 1.14.14.47 GO:0004517 ... O34453 27607918
    348575 5g68:A (1.63) BS04 ML6 1.14.14.47 GO:0004517 ... O34453 27607918
    348576 5g68:A (1.63) BS05 POL 1.14.14.47 GO:0004517 ... O34453 27607918
    348577 5g69:A (2.016) BS01 HEM 1.14.14.47 GO:0004517 ... O34453 27607918
    348578 5g69:A (2.016) BS02 H4B 1.14.14.47 GO:0004517 ... O34453 27607918
    348579 5g69:A (2.016) BS03 M7K 1.14.14.47 GO:0004517 ... O34453 27607918
    348580 5g69:A (2.016) BS04 POL 1.14.14.47 GO:0004517 ... O34453 27607918
    348581 5g69:A (2.016) BS05 POL 1.14.14.47 GO:0004517 ... O34453 27607918
    348582 5g6a:A (1.92) BS01 HEM 1.14.14.47 GO:0004517 ... O34453 27607918
    348583 5g6a:A (1.92) BS02 H4B 1.14.14.47 GO:0004517 ... O34453 27607918
    348584 5g6a:A (1.92) BS03 M48 1.14.14.47 GO:0004517 ... O34453 27607918
    348585 5g6b:A (1.801) BS01 HEM 1.14.14.47 GO:0004517 ... O34453 27607918
    348586 5g6b:A (1.801) BS02 M48 1.14.14.47 GO:0004517 ... O34453 27607918
    348587 5g6b:A (1.801) BS03 M48 1.14.14.47 GO:0004517 ... O34453 27607918
    348588 5g6c:A (2.13) BS01 HEM 1.14.14.47 GO:0004517 ... O34453 27607918
    348589 5g6c:A (2.13) BS02 H4B 1.14.14.47 GO:0004517 ... O34453 27607918
    348590 5g6c:A (2.13) BS03 M48 1.14.14.47 GO:0004517 ... O34453 27607918
    348591 5g6d:A (1.821) BS01 HEM 1.14.14.47 GO:0004517 ... O34453 27607918
    348592 5g6d:A (1.821) BS02 H4B 1.14.14.47 GO:0004517 ... O34453 27607918
    348593 5g6d:A (1.821) BS03 JHT 1.14.14.47 GO:0004517 ... O34453 27607918
    348594 5g6e:A (2.111) BS01 HEM 1.14.14.47 GO:0004517 ... O34453 27607918
    348595 5g6e:A (2.111) BS02 H4B 1.14.14.47 GO:0004517 ... O34453 27607918
    348596 5g6e:A (2.111) BS03 XH8 1.14.14.47 GO:0004517 ... O34453 27607918
    348597 5g6f:A (2.26) BS01 HEM 1.14.14.47 GO:0004517 ... O34453 27607918
    348598 5g6f:A (2.26) BS02 H4B 1.14.14.47 GO:0004517 ... O34453 27607918
    348599 5g6f:A (2.26) BS03 2SN 1.14.14.47 GO:0004517 ... O34453 27607918
    348600 5g6g:A (1.981) BS01 HEM 1.14.14.47 GO:0004517 ... O34453 27607918

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).