SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    350601 5gti:A (2.5) BS01 FE2 1.10.3.9 GO:0005506 ... P51765 28219079
    350602 5gti:A (2.5) BS02 CLA 1.10.3.9 GO:0005506 ... P51765 28219079
    350603 5gti:A (2.5) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 28219079
    350604 5gti:A (2.5) BS04 PHO 1.10.3.9 GO:0005506 ... P51765 28219079
    350605 5gti:A (2.5) BS05 CLA 1.10.3.9 GO:0005506 ... P51765 28219079
    350606 5gti:A (2.5) BS06 OEX 1.10.3.9 GO:0005506 ... P51765 28219079
    350607 5gti:A (2.5) BS07 BCT 1.10.3.9 GO:0005506 ... P51765 28219079
    350608 5gti:A (2.5) BS08 CLA 1.10.3.9 GO:0005506 ... P51765 28219079
    350609 5gti:A (2.5) BS09 PHO 1.10.3.9 GO:0005506 ... P51765 28219079
    350610 5gti:B (2.5) BS01 CLA ? GO:0009521 ... D0VWR1 28219079
    350611 5gti:B (2.5) BS02 CLA ? GO:0009521 ... D0VWR1 28219079
    350612 5gti:B (2.5) BS03 CLA ? GO:0009521 ... D0VWR1 28219079
    350613 5gti:B (2.5) BS04 CLA ? GO:0009521 ... D0VWR1 28219079
    350614 5gti:B (2.5) BS05 CLA ? GO:0009521 ... D0VWR1 28219079
    350615 5gti:B (2.5) BS06 CLA ? GO:0009521 ... D0VWR1 28219079
    350616 5gti:B (2.5) BS07 CLA ? GO:0009521 ... D0VWR1 28219079
    350617 5gti:B (2.5) BS08 CLA ? GO:0009521 ... D0VWR1 28219079
    350618 5gti:B (2.5) BS09 CLA ? GO:0009521 ... D0VWR1 28219079
    350619 5gti:B (2.5) BS10 CLA ? GO:0009521 ... D0VWR1 28219079
    350620 5gti:B (2.5) BS11 CLA ? GO:0009521 ... D0VWR1 28219079
    350621 5gti:B (2.5) BS12 CLA ? GO:0009521 ... D0VWR1 28219079
    350622 5gti:B (2.5) BS13 CLA ? GO:0009521 ... D0VWR1 28219079
    350623 5gti:B (2.5) BS14 CLA ? GO:0009521 ... D0VWR1 28219079
    350624 5gti:B (2.5) BS15 CLA ? GO:0009521 ... D0VWR1 28219079
    350625 5gti:B (2.5) BS16 CLA ? GO:0009521 ... D0VWR1 28219079
    350626 5gti:C (2.5) BS01 OEX ? GO:0005737 ... D0VWR7 28219079
    350627 5gti:C (2.5) BS02 CLA ? GO:0005737 ... D0VWR7 28219079
    350628 5gti:C (2.5) BS03 CLA ? GO:0005737 ... D0VWR7 28219079
    350629 5gti:C (2.5) BS04 CLA ? GO:0005737 ... D0VWR7 28219079
    350630 5gti:C (2.5) BS05 CLA ? GO:0005737 ... D0VWR7 28219079
    350631 5gti:C (2.5) BS06 CLA ? GO:0005737 ... D0VWR7 28219079
    350632 5gti:C (2.5) BS07 CLA ? GO:0005737 ... D0VWR7 28219079
    350633 5gti:C (2.5) BS08 CLA ? GO:0005737 ... D0VWR7 28219079
    350634 5gti:C (2.5) BS09 CLA ? GO:0005737 ... D0VWR7 28219079
    350635 5gti:C (2.5) BS10 CLA ? GO:0005737 ... D0VWR7 28219079
    350636 5gti:C (2.5) BS11 CLA ? GO:0005737 ... D0VWR7 28219079
    350637 5gti:C (2.5) BS12 CLA ? GO:0005737 ... D0VWR7 28219079
    350638 5gti:C (2.5) BS13 CLA ? GO:0005737 ... D0VWR7 28219079
    350639 5gti:C (2.5) BS14 CLA ? GO:0005737 ... D0VWR7 28219079
    350640 5gti:C (2.5) BS15 CA ? GO:0005737 ... D0VWR7 28219079
    350641 5gti:D (2.5) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    350642 5gti:D (2.5) BS02 CLA 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    350643 5gti:D (2.5) BS03 PHO 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    350644 5gti:D (2.5) BS04 BCT 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    350645 5gti:D (2.5) BS05 CLA 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    350646 5gti:D (2.5) BS06 CLA 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    350647 5gti:D (2.5) BS07 PHO 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    350648 5gti:D (2.5) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    350649 5gti:D (2.5) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    350650 5gti:E (2.5) BS01 HEM ? GO:0005506 ... P12238 28219079
    350651 5gti:F (2.5) BS01 HEM ? GO:0005506 ... P12239 28219079
    350652 5gti:H (2.5) BS01 CLA ? GO:0009523 ... P19052 28219079
    350653 5gti:H (2.5) BS02 CLA ? GO:0009523 ... P19052 28219079
    350654 5gti:H (2.5) BS03 CLA ? GO:0009523 ... P19052 28219079
    350655 5gti:H (2.5) BS04 CLA ? GO:0009523 ... P19052 28219079
    350656 5gti:I (2.5) BS01 CLA ? GO:0005737 ... P12240 28219079
    350657 5gti:J (2.5) BS01 MG ? GO:0009523 ... Q7DGD4 28219079
    350658 5gti:K (2.5) BS01 peptide ? GO:0005737 ... P19054 28219079
    350659 5gti:K (2.5) BS02 CLA ? GO:0005737 ... P19054 28219079
    350660 5gti:O (2.5) BS01 CA ? GO:0009523 ... D0VWR2 28219079
    350661 5gti:V (2.5) BS01 HEC ? GO:0005506 ... P0A387 28219079
    350662 5gti:Z (2.5) BS01 peptide ? GO:0009523 ... D0VWR5 28219079
    350663 5gti:a (2.5) BS01 FE2 1.10.3.9 GO:0005506 ... P51765 28219079
    350664 5gti:a (2.5) BS02 CLA 1.10.3.9 GO:0005506 ... P51765 28219079
    350665 5gti:a (2.5) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 28219079
    350666 5gti:a (2.5) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 28219079
    350667 5gti:a (2.5) BS05 PHO 1.10.3.9 GO:0005506 ... P51765 28219079
    350668 5gti:a (2.5) BS06 PHO 1.10.3.9 GO:0005506 ... P51765 28219079
    350669 5gti:a (2.5) BS07 CLA 1.10.3.9 GO:0005506 ... P51765 28219079
    350670 5gti:a (2.5) BS08 OEX 1.10.3.9 GO:0005506 ... P51765 28219079
    350671 5gti:a (2.5) BS09 BCT 1.10.3.9 GO:0005506 ... P51765 28219079
    350672 5gti:b (2.5) BS01 CLA ? GO:0009521 ... D0VWR1 28219079
    350673 5gti:b (2.5) BS02 CLA ? GO:0009521 ... D0VWR1 28219079
    350674 5gti:b (2.5) BS03 CLA ? GO:0009521 ... D0VWR1 28219079
    350675 5gti:b (2.5) BS04 CLA ? GO:0009521 ... D0VWR1 28219079
    350676 5gti:b (2.5) BS05 CLA ? GO:0009521 ... D0VWR1 28219079
    350677 5gti:b (2.5) BS06 CLA ? GO:0009521 ... D0VWR1 28219079
    350678 5gti:b (2.5) BS07 CLA ? GO:0009521 ... D0VWR1 28219079
    350679 5gti:b (2.5) BS08 CLA ? GO:0009521 ... D0VWR1 28219079
    350680 5gti:b (2.5) BS09 CLA ? GO:0009521 ... D0VWR1 28219079
    350681 5gti:b (2.5) BS10 CLA ? GO:0009521 ... D0VWR1 28219079
    350682 5gti:b (2.5) BS11 CLA ? GO:0009521 ... D0VWR1 28219079
    350683 5gti:b (2.5) BS12 CLA ? GO:0009521 ... D0VWR1 28219079
    350684 5gti:b (2.5) BS13 CLA ? GO:0009521 ... D0VWR1 28219079
    350685 5gti:b (2.5) BS14 CLA ? GO:0009521 ... D0VWR1 28219079
    350686 5gti:b (2.5) BS15 CLA ? GO:0009521 ... D0VWR1 28219079
    350687 5gti:b (2.5) BS16 CLA ? GO:0009521 ... D0VWR1 28219079
    350688 5gti:c (2.5) BS01 OEX ? GO:0005737 ... D0VWR7 28219079
    350689 5gti:c (2.5) BS02 CLA ? GO:0005737 ... D0VWR7 28219079
    350690 5gti:c (2.5) BS03 CLA ? GO:0005737 ... D0VWR7 28219079
    350691 5gti:c (2.5) BS04 CLA ? GO:0005737 ... D0VWR7 28219079
    350692 5gti:c (2.5) BS05 CLA ? GO:0005737 ... D0VWR7 28219079
    350693 5gti:c (2.5) BS06 CLA ? GO:0005737 ... D0VWR7 28219079
    350694 5gti:c (2.5) BS07 CLA ? GO:0005737 ... D0VWR7 28219079
    350695 5gti:c (2.5) BS08 CLA ? GO:0005737 ... D0VWR7 28219079
    350696 5gti:c (2.5) BS09 CLA ? GO:0005737 ... D0VWR7 28219079
    350697 5gti:c (2.5) BS10 CLA ? GO:0005737 ... D0VWR7 28219079
    350698 5gti:c (2.5) BS11 CLA ? GO:0005737 ... D0VWR7 28219079
    350699 5gti:c (2.5) BS12 CLA ? GO:0005737 ... D0VWR7 28219079
    350700 5gti:c (2.5) BS13 CLA ? GO:0005737 ... D0VWR7 28219079
    350701 5gti:c (2.5) BS14 CLA ? GO:0005737 ... D0VWR7 28219079
    350702 5gti:c (2.5) BS15 CA ? GO:0005737 ... D0VWR7 28219079
    350703 5gti:c (2.5) BS16 CA ? GO:0005737 ... D0VWR7 28219079
    350704 5gti:d (2.5) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    350705 5gti:d (2.5) BS02 CLA 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    350706 5gti:d (2.5) BS03 CLA 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    350707 5gti:d (2.5) BS04 PHO 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    350708 5gti:d (2.5) BS05 PHO 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    350709 5gti:d (2.5) BS06 BCT 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    350710 5gti:d (2.5) BS07 CLA 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    350711 5gti:d (2.5) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    350712 5gti:d (2.5) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 28219079
    350713 5gti:e (2.5) BS01 HEM ? GO:0005506 ... P12238 28219079
    350714 5gti:f (2.5) BS01 HEM ? GO:0005506 ... P12239 28219079
    350715 5gti:h (2.5) BS01 CLA ? GO:0009523 ... P19052 28219079
    350716 5gti:h (2.5) BS02 CLA ? GO:0009523 ... P19052 28219079
    350717 5gti:h (2.5) BS03 CLA ? GO:0009523 ... P19052 28219079
    350718 5gti:h (2.5) BS04 CLA ? GO:0009523 ... P19052 28219079
    350719 5gti:i (2.5) BS01 CLA ? GO:0005737 ... P12240 28219079
    350720 5gti:j (2.5) BS01 MG ? GO:0009523 ... Q7DGD4 28219079
    350721 5gti:k (2.5) BS01 peptide ? GO:0005737 ... P19054 28219079
    350722 5gti:k (2.5) BS02 CLA ? GO:0005737 ... P19054 28219079
    350723 5gti:o (2.5) BS01 CA ? GO:0009523 ... D0VWR2 28219079
    350724 5gti:v (2.5) BS01 HEC ? GO:0005506 ... P0A387 28219079
    350725 5gti:z (2.5) BS01 peptide ? GO:0009523 ... D0VWR5 28219079
    350726 5gtj:A (2.0) BS01 PO4 3.1.3.16
    3.1.3.48
    GO:0006470 ... Q9BV47 27583453
    350727 5gtj:B (2.0) BS01 PO4 3.1.3.16
    3.1.3.48
    GO:0006470 ... Q9BV47 27583453
    350728 5gtj:C (2.0) BS01 PO4 3.1.3.16
    3.1.3.48
    GO:0006470 ... Q9BV47 27583453
    350729 5gtj:D (2.0) BS01 PO4 3.1.3.16
    3.1.3.48
    GO:0006470 ... Q9BV47 27583453
    350730 5gtk:A (2.6) BS01 NAD N/A GO:0016491 ... N/A N/A
    350731 5gtk:B (2.6) BS01 NAD N/A GO:0016491 ... N/A N/A
    350732 5gtk:C (2.6) BS01 NAD N/A GO:0016491 ... N/A N/A
    350733 5gtk:D (2.6) BS01 NAD N/A GO:0016491 ... N/A N/A
    350734 5gtl:A (2.0) BS01 NDP N/A GO:0016491 ... N/A N/A
    350735 5gtl:B (2.0) BS01 NDP N/A GO:0016491 ... N/A N/A
    350736 5gtl:C (2.0) BS01 NDP N/A GO:0016491 ... N/A N/A
    350737 5gtl:D (2.0) BS01 NDP N/A GO:0016491 ... N/A N/A
    350738 5gtn:A (1.85) BS01 peptide ? GO:0003677 ... P37231 28342850
    350739 5gtn:A (1.85) BS02 Q35 ? GO:0003677 ... P37231 28342850 BindingDB: EC50=0.380000nM
    350740 5gto:A (2.1) BS01 peptide ? GO:0003677 ... P37231 28342850
    350741 5gto:A (2.1) BS02 T35 ? GO:0003677 ... P37231 28342850 BindingDB: EC50=183nM
    350742 5gtp:A (2.35) BS01 peptide ? GO:0003677 ... P37231 28342850
    350743 5gtq:A (1.13) BS01 MG ? GO:0004341 ... Q95YI4 N/A
    350744 5gtr:A (2.804) BS01 peptide ? N/A P03372 29045135
    350745 5gtr:A (2.804) BS02 EST ? N/A P03372 29045135 BindingDB: IC50=1.3nM, Kd=0.2nM, EC50=0.75nM, Ki=0.21nM
    350746 5gtu:A (1.5) BS01 peptide ? GO:0005515 ... Q9UBQ0 27827364
    350747 5gtw:A (2.93) BS01 CA 5.4.99.16 GO:0003824 ... I3NX86 N/A
    350748 5gtw:A (2.93) BS02 MG 5.4.99.16 GO:0003824 ... I3NX86 N/A
    350749 5gtw:B (2.93) BS01 CA 5.4.99.16 GO:0003824 ... I3NX86 N/A
    350750 5gtw:B (2.93) BS02 MG 5.4.99.16 GO:0003824 ... I3NX86 N/A
    350751 5gtw:C (2.93) BS01 CA 5.4.99.16 GO:0003824 ... I3NX86 N/A
    350752 5gtw:C (2.93) BS02 MG 5.4.99.16 GO:0003824 ... I3NX86 N/A
    350753 5gtw:D (2.93) BS01 CA 5.4.99.16 GO:0003824 ... I3NX86 N/A
    350754 5gtw:D (2.93) BS02 MG 5.4.99.16 GO:0003824 ... I3NX86 N/A
    350755 5gty:A (3.14) BS01 816 2.7.10.1 GO:0004672 ... P00533 28407693
    350756 5gty:B (3.14) BS01 816 2.7.10.1 GO:0004672 ... P00533 28407693
    350757 5gty:C (3.14) BS01 816 2.7.10.1 GO:0004672 ... P00533 28407693
    350758 5gty:D (3.14) BS01 816 2.7.10.1 GO:0004672 ... P00533 28407693
    350759 5gty:E (3.14) BS01 816 2.7.10.1 GO:0004672 ... P00533 28407693
    350760 5gty:F (3.14) BS01 816 2.7.10.1 GO:0004672 ... P00533 28407693
    350761 5gty:G (3.14) BS01 816 2.7.10.1 GO:0004672 ... P00533 28407693
    350762 5gty:H (3.14) BS01 816 2.7.10.1 GO:0004672 ... P00533 28407693
    350763 5gtz:A (2.999) BS01 81C 2.7.10.1 GO:0004672 ... P00533 N/A
    350764 5gu0:X (1.95) BS01 AU ? GO:0005506 ... P02791 28300064
    350765 5gu0:X (1.95) BS02 AU ? GO:0005506 ... P02791 28300064
    350766 5gu0:X (1.95) BS03 AU ? GO:0005506 ... P02791 28300064
    350767 5gu0:X (1.95) BS04 AU ? GO:0005506 ... P02791 28300064
    350768 5gu0:X (1.95) BS05 AU ? GO:0005506 ... P02791 28300064
    350769 5gu1:X (2.05) BS01 AU ? GO:0005506 ... P02791 28300064
    350770 5gu1:X (2.05) BS02 AU ? GO:0005506 ... P02791 28300064
    350771 5gu1:X (2.05) BS03 AU ? GO:0005506 ... P02791 28300064
    350772 5gu1:X (2.05) BS04 AU ? GO:0005506 ... P02791 28300064
    350773 5gu1:X (2.05) BS05 AU ? GO:0005506 ... P02791 28300064
    350774 5gu2:X (2.12) BS01 AU ? GO:0005506 ... P02791 28300064
    350775 5gu2:X (2.12) BS02 AU ? GO:0005506 ... P02791 28300064
    350776 5gu2:X (2.12) BS03 AU ? GO:0005506 ... P02791 28300064
    350777 5gu2:X (2.12) BS04 AU ? GO:0005506 ... P02791 28300064
    350778 5gu3:X (2.03) BS01 AU ? GO:0005506 ... P02791 28300064
    350779 5gu4:A (1.55) BS01 peptide 3.2.2.22 GO:0017148 ... P02879 27754366
    350780 5gu4:B (1.55) BS01 peptide 3.2.2.22 GO:0017148 ... P02879 27754366
    350781 5gub:A (1.78) BS01 GCD ? GO:0005886 ... D1AWE0 28432302
    350782 5gub:A (1.78) BS02 CA ? GO:0005886 ... D1AWE0 28432302
    350783 5gub:B (1.78) BS01 GCD ? GO:0005886 ... D1AWE0 28432302
    350784 5gub:B (1.78) BS02 CA ? GO:0005886 ... D1AWE0 28432302
    350785 5gub:C (1.78) BS01 GCD ? GO:0005886 ... D1AWE0 28432302
    350786 5gub:C (1.78) BS02 CA ? GO:0005886 ... D1AWE0 28432302
    350787 5gud:A (1.68) BS01 2IT N/A GO:0006520 ... N/A 28486765
    350788 5gud:A (1.68) BS02 NDP N/A GO:0006520 ... N/A 28486765
    350789 5gud:B (1.68) BS01 2IT N/A GO:0006520 ... N/A 28486765
    350790 5gud:B (1.68) BS02 NDP N/A GO:0006520 ... N/A 28486765
    350791 5gud:C (1.68) BS01 2IT N/A GO:0006520 ... N/A 28486765
    350792 5gud:C (1.68) BS02 NDP N/A GO:0006520 ... N/A 28486765
    350793 5gud:D (1.68) BS01 NDP N/A GO:0006520 ... N/A 28486765
    350794 5gud:E (1.68) BS01 NDP N/A GO:0006520 ... N/A 28486765
    350795 5gud:F (1.68) BS01 2IT N/A GO:0006520 ... N/A 28486765
    350796 5gud:F (1.68) BS02 NDP N/A GO:0006520 ... N/A 28486765
    350797 5gue:A (1.8) BS01 GGS 4.2.3.146 GO:0016829 ... C9K1X5 28463490
    350798 5gue:A (1.8) BS02 MG 4.2.3.146 GO:0016829 ... C9K1X5 28463490
    350799 5gue:B (1.8) BS01 GGS 4.2.3.146 GO:0016829 ... C9K1X5 28463490
    350800 5gue:B (1.8) BS02 MG 4.2.3.146 GO:0016829 ... C9K1X5 28463490

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).