SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    351401 5h1s:H (3.5) BS01 rna ? GO:0003735 ... P82192 27762343
    351402 5h1s:H (3.5) BS02 rna ? GO:0003735 ... P82192 27762343
    351403 5h1s:I (3.5) BS01 rna ? GO:0003735 ... P82193 27762343
    351404 5h1s:J (3.5) BS01 rna ? GO:0003735 ... P82180 27762343
    351405 5h1s:L (3.5) BS01 rna ? GO:0003735 ... P12629 27762343
    351406 5h1s:M (3.5) BS01 rna ? GO:0003735 ... P09596 27762343
    351407 5h1s:N (3.5) BS01 rna ? GO:0003735 ... P22798 27762343
    351408 5h1s:O (3.5) BS01 rna ? GO:0003735 ... P17353 27762343
    351409 5h1s:O (3.5) BS02 rna ? GO:0003735 ... P17353 27762343
    351410 5h1s:P (3.5) BS01 rna ? GO:0003735 ... P82194 27762343
    351411 5h1s:P (3.5) BS02 rna ? GO:0003735 ... P82194 27762343
    351412 5h1s:Q (3.5) BS01 rna ? GO:0003735 ... P82195 27762343
    351413 5h1s:Q (3.5) BS02 rna ? GO:0003735 ... P82195 27762343
    351414 5h1s:R (3.5) BS01 rna ? GO:0003735 ... P82413 27762343
    351415 5h1s:R (3.5) BS02 rna ? GO:0003735 ... P82413 27762343
    351416 5h1s:S (3.5) BS01 rna ? GO:0000027 ... P28803 27762343
    351417 5h1s:T (3.5) BS01 rna ? GO:0003723 ... P24613 27762343
    351418 5h1s:U (3.5) BS01 rna ? GO:0003735 ... P09594 27762343
    351419 5h1s:V (3.5) BS01 rna ? GO:0003735 ... Q9LWB5 27762343
    351420 5h1s:W (3.5) BS01 rna ? GO:0003723 ... P27683 27762343
    351421 5h1s:X (3.5) BS01 rna ? GO:0003735 ... P82190 27762343
    351422 5h1s:Y (3.5) BS01 rna ? GO:0003735 ... P82245 27762343
    351423 5h1s:Z (3.5) BS01 rna ? GO:0003735 ... P82248 27762343
    351424 5h1s:b (3.5) BS01 rna ? GO:0003735 ... P28804 27762343
    351425 5h1s:b (3.5) BS02 rna ? GO:0003735 ... P28804 27762343
    351426 5h1s:c (3.5) BS01 rna ? GO:0003735 ... P28805 27762343
    351427 5h1s:d (3.5) BS01 rna ? GO:0003735 ... P82244 27762343
    351428 5h1s:e (3.5) BS01 rna ? GO:0003735 ... P23326 27762343
    351429 5h1s:f (3.5) BS01 rna ? GO:0003735 ... P12230 27762343
    351430 5h1s:g (3.5) BS01 rna ? GO:0005840 ... P27684 27762343
    351431 5h1s:h (3.5) BS01 rna ? GO:0003723 ... P82411 27762343
    351432 5h1s:h (3.5) BS02 rna ? GO:0003723 ... P82411 27762343
    351433 5h1t:A (1.951) BS01 ZN 2.3.2.27 N/A O15164 28207202
    351434 5h1t:A (1.951) BS02 ZN 2.3.2.27 N/A O15164 28207202
    351435 5h1t:A (1.951) BS03 7FF 2.3.2.27 N/A O15164 28207202 MOAD: Kd=0.16mM
    351436 5h1t:B (1.951) BS01 ZN 2.3.2.27 N/A O15164 28207202
    351437 5h1t:B (1.951) BS02 ZN 2.3.2.27 N/A O15164 28207202
    351438 5h1t:B (1.951) BS03 7FF 2.3.2.27 N/A O15164 28207202 MOAD: Kd=0.16mM
    351439 5h1t:C (1.951) BS01 ZN 2.3.2.27 N/A O15164 28207202
    351440 5h1t:C (1.951) BS02 ZN 2.3.2.27 N/A O15164 28207202
    351441 5h1t:C (1.951) BS03 7FF 2.3.2.27 N/A O15164 28207202 MOAD: Kd=0.16mM
    351442 5h1t:D (1.951) BS01 ZN 2.3.2.27 N/A O15164 28207202
    351443 5h1t:D (1.951) BS02 ZN 2.3.2.27 N/A O15164 28207202
    351444 5h1t:D (1.951) BS03 7FF 2.3.2.27 N/A O15164 28207202 MOAD: Kd=0.16mM
    351445 5h1u:A (1.901) BS01 6KT 2.3.2.27 N/A O15164 28207202 MOAD: Kd=63uM
    351446 5h1u:A (1.901) BS02 ZN 2.3.2.27 N/A O15164 28207202
    351447 5h1u:A (1.901) BS03 ZN 2.3.2.27 N/A O15164 28207202
    351448 5h1u:B (1.901) BS01 6KT 2.3.2.27 N/A O15164 28207202 MOAD: Kd=63uM
    351449 5h1u:B (1.901) BS02 ZN 2.3.2.27 N/A O15164 28207202
    351450 5h1u:B (1.901) BS03 ZN 2.3.2.27 N/A O15164 28207202
    351451 5h1u:C (1.901) BS01 6KT 2.3.2.27 N/A O15164 28207202 MOAD: Kd=63uM
    351452 5h1u:C (1.901) BS02 ZN 2.3.2.27 N/A O15164 28207202
    351453 5h1u:C (1.901) BS03 ZN 2.3.2.27 N/A O15164 28207202
    351454 5h1u:D (1.901) BS01 6KT 2.3.2.27 N/A O15164 28207202 MOAD: Kd=63uM
    351455 5h1u:D (1.901) BS02 ZN 2.3.2.27 N/A O15164 28207202
    351456 5h1u:D (1.901) BS03 ZN 2.3.2.27 N/A O15164 28207202
    351457 5h1v:A (2.002) BS01 ZN 2.3.2.27 N/A O15164 28207202
    351458 5h1v:A (2.002) BS02 ZN 2.3.2.27 N/A O15164 28207202
    351459 5h1v:A (2.002) BS03 7FU 2.3.2.27 N/A O15164 28207202 MOAD: Kd=34uM
    351460 5h1v:B (2.002) BS01 ZN 2.3.2.27 N/A O15164 28207202
    351461 5h1v:B (2.002) BS02 ZN 2.3.2.27 N/A O15164 28207202
    351462 5h1v:B (2.002) BS03 7FU 2.3.2.27 N/A O15164 28207202 MOAD: Kd=34uM
    351463 5h1w:A (1.631) BS01 LER 5.1.3.-
    5.3.1.-
    GO:0006020 ... Q9WYP7 28258150
    351464 5h1w:A (1.631) BS02 MN 5.1.3.-
    5.3.1.-
    GO:0006020 ... Q9WYP7 28258150
    351465 5h1w:B (1.631) BS01 LER 5.1.3.-
    5.3.1.-
    GO:0006020 ... Q9WYP7 28258150
    351466 5h1w:B (1.631) BS02 MN 5.1.3.-
    5.3.1.-
    GO:0006020 ... Q9WYP7 28258150
    351467 5h1y:A (2.26) BS01 MG 3.6.4.13 GO:0000398 ... Q9UJV9 27928732
    351468 5h1y:B (2.26) BS01 MG 3.6.4.13 GO:0000398 ... Q9UJV9 27928732
    351469 5h1z:A (3.1) BS01 HEM ? GO:0004497 ... A0A1S4NYE0 27941697
    351470 5h20:A (2.5) BS01 GLC ? GO:0005737 ... Q5LC36 28027933
    351471 5h21:A (1.591) BS01 RMR ? N/A O60885 30108844
    351472 5h22:A (1.499) BS01 7FT 3.6.4.10 GO:0005524 ... P07901 27914802
    351473 5h24:A (2.5) BS01 peptide ? N/A O75530 28092155
    351474 5h24:A (2.5) BS02 LQG ? N/A O75530 28092155 BindingDB: IC50=1000nM
    351475 5h24:B (2.5) BS01 peptide ? N/A O75530 28092155
    351476 5h24:B (2.5) BS02 LQG ? N/A O75530 28092155 BindingDB: IC50=1000nM
    351477 5h25:A (2.88) BS01 peptide ? N/A O75530 28092155
    351478 5h25:A (2.88) BS02 LQH ? N/A O75530 28092155 BindingDB: IC50=6040nM
    351479 5h25:B (2.88) BS01 peptide ? N/A O75530 28092155
    351480 5h25:B (2.88) BS02 LQH ? N/A O75530 28092155 BindingDB: IC50=6040nM
    351481 5h29:A (2.3) BS01 PRO ? N/A Q830N9 28935609
    351482 5h2c:A (3.508) BS01 peptide ? N/A P35845 28319008
    351483 5h2d:A (1.6) BS01 ERG ? GO:0008289 ... Q6CUK7 28319008
    351484 5h2f:A (2.2) BS01 OEX 1.10.3.9 GO:0005506 ... P0A444 28272640
    351485 5h2f:A (2.2) BS02 FE2 1.10.3.9 GO:0005506 ... P0A444 28272640
    351486 5h2f:A (2.2) BS03 CLA 1.10.3.9 GO:0005506 ... P0A444 28272640
    351487 5h2f:A (2.2) BS04 CLA 1.10.3.9 GO:0005506 ... P0A444 28272640
    351488 5h2f:A (2.2) BS05 PHO 1.10.3.9 GO:0005506 ... P0A444 28272640
    351489 5h2f:A (2.2) BS06 CLA 1.10.3.9 GO:0005506 ... P0A444 28272640
    351490 5h2f:A (2.2) BS07 BCT 1.10.3.9 GO:0005506 ... P0A444 28272640
    351491 5h2f:A (2.2) BS08 CLA 1.10.3.9 GO:0005506 ... P0A444 28272640
    351492 5h2f:A (2.2) BS09 CLA 1.10.3.9 GO:0005506 ... P0A444 28272640
    351493 5h2f:A (2.2) BS10 PHO 1.10.3.9 GO:0005506 ... P0A444 28272640
    351494 5h2f:B (2.2) BS01 CLA ? GO:0009521 ... Q8DIQ1 28272640
    351495 5h2f:B (2.2) BS02 CLA ? GO:0009521 ... Q8DIQ1 28272640
    351496 5h2f:B (2.2) BS03 CLA ? GO:0009521 ... Q8DIQ1 28272640
    351497 5h2f:B (2.2) BS04 CLA ? GO:0009521 ... Q8DIQ1 28272640
    351498 5h2f:B (2.2) BS05 CLA ? GO:0009521 ... Q8DIQ1 28272640
    351499 5h2f:B (2.2) BS06 CLA ? GO:0009521 ... Q8DIQ1 28272640
    351500 5h2f:B (2.2) BS07 CLA ? GO:0009521 ... Q8DIQ1 28272640
    351501 5h2f:B (2.2) BS08 CLA ? GO:0009521 ... Q8DIQ1 28272640
    351502 5h2f:B (2.2) BS09 CLA ? GO:0009521 ... Q8DIQ1 28272640
    351503 5h2f:B (2.2) BS10 CLA ? GO:0009521 ... Q8DIQ1 28272640
    351504 5h2f:B (2.2) BS11 CLA ? GO:0009521 ... Q8DIQ1 28272640
    351505 5h2f:B (2.2) BS12 CLA ? GO:0009521 ... Q8DIQ1 28272640
    351506 5h2f:B (2.2) BS13 CLA ? GO:0009521 ... Q8DIQ1 28272640
    351507 5h2f:B (2.2) BS14 CLA ? GO:0009521 ... Q8DIQ1 28272640
    351508 5h2f:B (2.2) BS15 CLA ? GO:0009521 ... Q8DIQ1 28272640
    351509 5h2f:B (2.2) BS16 CLA ? GO:0009521 ... Q8DIQ1 28272640
    351510 5h2f:C (2.2) BS01 OEX ? GO:0005737 ... Q8DIF8 28272640
    351511 5h2f:C (2.2) BS02 CLA ? GO:0005737 ... Q8DIF8 28272640
    351512 5h2f:C (2.2) BS03 CLA ? GO:0005737 ... Q8DIF8 28272640
    351513 5h2f:C (2.2) BS04 CLA ? GO:0005737 ... Q8DIF8 28272640
    351514 5h2f:C (2.2) BS05 CLA ? GO:0005737 ... Q8DIF8 28272640
    351515 5h2f:C (2.2) BS06 CLA ? GO:0005737 ... Q8DIF8 28272640
    351516 5h2f:C (2.2) BS07 CLA ? GO:0005737 ... Q8DIF8 28272640
    351517 5h2f:C (2.2) BS08 CLA ? GO:0005737 ... Q8DIF8 28272640
    351518 5h2f:C (2.2) BS09 CLA ? GO:0005737 ... Q8DIF8 28272640
    351519 5h2f:C (2.2) BS10 CLA ? GO:0005737 ... Q8DIF8 28272640
    351520 5h2f:C (2.2) BS11 CLA ? GO:0005737 ... Q8DIF8 28272640
    351521 5h2f:C (2.2) BS12 CLA ? GO:0005737 ... Q8DIF8 28272640
    351522 5h2f:C (2.2) BS13 CLA ? GO:0005737 ... Q8DIF8 28272640
    351523 5h2f:C (2.2) BS14 CLA ? GO:0005737 ... Q8DIF8 28272640
    351524 5h2f:D (2.2) BS01 FE2 1.10.3.9 GO:0005506 ... Q8CM25 28272640
    351525 5h2f:D (2.2) BS02 CLA 1.10.3.9 GO:0005506 ... Q8CM25 28272640
    351526 5h2f:D (2.2) BS03 PHO 1.10.3.9 GO:0005506 ... Q8CM25 28272640
    351527 5h2f:D (2.2) BS04 CLA 1.10.3.9 GO:0005506 ... Q8CM25 28272640
    351528 5h2f:D (2.2) BS05 CLA 1.10.3.9 GO:0005506 ... Q8CM25 28272640
    351529 5h2f:D (2.2) BS06 PHO 1.10.3.9 GO:0005506 ... Q8CM25 28272640
    351530 5h2f:D (2.2) BS07 CLA 1.10.3.9 GO:0005506 ... Q8CM25 28272640
    351531 5h2f:D (2.2) BS08 CLA 1.10.3.9 GO:0005506 ... Q8CM25 28272640
    351532 5h2f:E (2.2) BS01 HEM ? GO:0005506 ... Q8DIP0 28272640
    351533 5h2f:F (2.2) BS01 HEM ? GO:0009523 ... Q8DIN9 28272640
    351534 5h2f:H (2.2) BS01 CLA ? GO:0009523 ... Q8DJ43 28272640
    351535 5h2f:H (2.2) BS02 CLA ? GO:0009523 ... Q8DJ43 28272640
    351536 5h2f:H (2.2) BS03 CLA ? GO:0009523 ... Q8DJ43 28272640
    351537 5h2f:H (2.2) BS04 RRX ? GO:0009523 ... Q8DJ43 28272640
    351538 5h2f:I (2.2) BS01 CLA ? GO:0005737 ... Q8DJZ6 28272640
    351539 5h2f:J (2.2) BS01 MG ? GO:0009523 ... P59087 28272640
    351540 5h2f:K (2.2) BS01 peptide ? GO:0009523 ... Q9F1K9 28272640
    351541 5h2f:K (2.2) BS02 CLA ? GO:0009523 ... Q9F1K9 28272640
    351542 5h2f:K (2.2) BS03 CLA ? GO:0009523 ... Q9F1K9 28272640
    351543 5h2f:K (2.2) BS04 MG ? GO:0009523 ... Q9F1K9 28272640
    351544 5h2f:O (2.2) BS01 CA ? GO:0009523 ... P0A431 28272640
    351545 5h2f:V (2.2) BS01 HEC ? GO:0005506 ... P0A386 28272640
    351546 5h2f:X (2.2) BS01 CLA ? GO:0009523 ... Q9F1R6 28272640
    351547 5h2f:Z (2.2) BS01 peptide ? GO:0009523 ... Q8DHJ2 28272640
    351548 5h2f:a (2.2) BS01 OEX 1.10.3.9 GO:0005506 ... P0A444 28272640
    351549 5h2f:a (2.2) BS02 FE2 1.10.3.9 GO:0005506 ... P0A444 28272640
    351550 5h2f:a (2.2) BS03 CLA 1.10.3.9 GO:0005506 ... P0A444 28272640
    351551 5h2f:a (2.2) BS04 CLA 1.10.3.9 GO:0005506 ... P0A444 28272640
    351552 5h2f:a (2.2) BS05 CLA 1.10.3.9 GO:0005506 ... P0A444 28272640
    351553 5h2f:a (2.2) BS06 PHO 1.10.3.9 GO:0005506 ... P0A444 28272640
    351554 5h2f:a (2.2) BS07 PHO 1.10.3.9 GO:0005506 ... P0A444 28272640
    351555 5h2f:a (2.2) BS08 CLA 1.10.3.9 GO:0005506 ... P0A444 28272640
    351556 5h2f:a (2.2) BS09 BCT 1.10.3.9 GO:0005506 ... P0A444 28272640
    351557 5h2f:a (2.2) BS10 CLA 1.10.3.9 GO:0005506 ... P0A444 28272640
    351558 5h2f:b (2.2) BS01 CLA ? GO:0009521 ... Q8DIQ1 28272640
    351559 5h2f:b (2.2) BS02 CLA ? GO:0009521 ... Q8DIQ1 28272640
    351560 5h2f:b (2.2) BS03 CLA ? GO:0009521 ... Q8DIQ1 28272640
    351561 5h2f:b (2.2) BS04 CLA ? GO:0009521 ... Q8DIQ1 28272640
    351562 5h2f:b (2.2) BS05 CLA ? GO:0009521 ... Q8DIQ1 28272640
    351563 5h2f:b (2.2) BS06 CLA ? GO:0009521 ... Q8DIQ1 28272640
    351564 5h2f:b (2.2) BS07 CLA ? GO:0009521 ... Q8DIQ1 28272640
    351565 5h2f:b (2.2) BS08 CLA ? GO:0009521 ... Q8DIQ1 28272640
    351566 5h2f:b (2.2) BS09 CLA ? GO:0009521 ... Q8DIQ1 28272640
    351567 5h2f:b (2.2) BS10 CLA ? GO:0009521 ... Q8DIQ1 28272640
    351568 5h2f:b (2.2) BS11 CLA ? GO:0009521 ... Q8DIQ1 28272640
    351569 5h2f:b (2.2) BS12 CLA ? GO:0009521 ... Q8DIQ1 28272640
    351570 5h2f:b (2.2) BS13 CLA ? GO:0009521 ... Q8DIQ1 28272640
    351571 5h2f:b (2.2) BS14 CLA ? GO:0009521 ... Q8DIQ1 28272640
    351572 5h2f:b (2.2) BS15 CLA ? GO:0009521 ... Q8DIQ1 28272640
    351573 5h2f:b (2.2) BS16 CLA ? GO:0009521 ... Q8DIQ1 28272640
    351574 5h2f:c (2.2) BS01 OEX ? GO:0005737 ... Q8DIF8 28272640
    351575 5h2f:c (2.2) BS02 CA ? GO:0005737 ... Q8DIF8 28272640
    351576 5h2f:c (2.2) BS03 CLA ? GO:0005737 ... Q8DIF8 28272640
    351577 5h2f:c (2.2) BS04 CLA ? GO:0005737 ... Q8DIF8 28272640
    351578 5h2f:c (2.2) BS05 CLA ? GO:0005737 ... Q8DIF8 28272640
    351579 5h2f:c (2.2) BS06 CLA ? GO:0005737 ... Q8DIF8 28272640
    351580 5h2f:c (2.2) BS07 CLA ? GO:0005737 ... Q8DIF8 28272640
    351581 5h2f:c (2.2) BS08 CLA ? GO:0005737 ... Q8DIF8 28272640
    351582 5h2f:c (2.2) BS09 CLA ? GO:0005737 ... Q8DIF8 28272640
    351583 5h2f:c (2.2) BS10 CLA ? GO:0005737 ... Q8DIF8 28272640
    351584 5h2f:c (2.2) BS11 CLA ? GO:0005737 ... Q8DIF8 28272640
    351585 5h2f:c (2.2) BS12 CLA ? GO:0005737 ... Q8DIF8 28272640
    351586 5h2f:c (2.2) BS13 CLA ? GO:0005737 ... Q8DIF8 28272640
    351587 5h2f:c (2.2) BS14 CLA ? GO:0005737 ... Q8DIF8 28272640
    351588 5h2f:c (2.2) BS15 CLA ? GO:0005737 ... Q8DIF8 28272640
    351589 5h2f:d (2.2) BS01 FE2 1.10.3.9 GO:0005506 ... Q8CM25 28272640
    351590 5h2f:d (2.2) BS02 CLA 1.10.3.9 GO:0005506 ... Q8CM25 28272640
    351591 5h2f:d (2.2) BS03 CLA 1.10.3.9 GO:0005506 ... Q8CM25 28272640
    351592 5h2f:d (2.2) BS04 PHO 1.10.3.9 GO:0005506 ... Q8CM25 28272640
    351593 5h2f:d (2.2) BS05 PHO 1.10.3.9 GO:0005506 ... Q8CM25 28272640
    351594 5h2f:d (2.2) BS06 CLA 1.10.3.9 GO:0005506 ... Q8CM25 28272640
    351595 5h2f:d (2.2) BS07 CLA 1.10.3.9 GO:0005506 ... Q8CM25 28272640
    351596 5h2f:d (2.2) BS08 CLA 1.10.3.9 GO:0005506 ... Q8CM25 28272640
    351597 5h2f:e (2.2) BS01 HEM ? GO:0005506 ... Q8DIP0 28272640
    351598 5h2f:f (2.2) BS01 HEM ? GO:0009523 ... Q8DIN9 28272640
    351599 5h2f:h (2.2) BS01 CLA ? GO:0009523 ... Q8DJ43 28272640
    351600 5h2f:h (2.2) BS02 CLA ? GO:0009523 ... Q8DJ43 28272640

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).