SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    351601 5h2f:h (2.2) BS03 CLA ? GO:0009523 ... Q8DJ43 28272640
    351602 5h2f:h (2.2) BS04 CLA ? GO:0009523 ... Q8DJ43 28272640
    351603 5h2f:h (2.2) BS05 CLA ? GO:0009523 ... Q8DJ43 28272640
    351604 5h2f:h (2.2) BS06 RRX ? GO:0009523 ... Q8DJ43 28272640
    351605 5h2f:i (2.2) BS01 CLA ? GO:0005737 ... Q8DJZ6 28272640
    351606 5h2f:j (2.2) BS01 MG ? GO:0009523 ... P59087 28272640
    351607 5h2f:k (2.2) BS01 peptide ? GO:0009523 ... Q9F1K9 28272640
    351608 5h2f:k (2.2) BS02 CLA ? GO:0009523 ... Q9F1K9 28272640
    351609 5h2f:k (2.2) BS03 CLA ? GO:0009523 ... Q9F1K9 28272640
    351610 5h2f:k (2.2) BS04 MG ? GO:0009523 ... Q9F1K9 28272640
    351611 5h2f:o (2.2) BS01 CA ? GO:0009523 ... P0A431 28272640
    351612 5h2f:v (2.2) BS01 HEC ? GO:0005506 ... P0A386 28272640
    351613 5h2f:x (2.2) BS01 CLA ? GO:0009523 ... Q9F1R6 28272640
    351614 5h2f:z (2.2) BS01 peptide ? GO:0009523 ... Q8DHJ2 28272640
    351615 5h2h:A (2.1) BS01 RET ? GO:0005216 ... P02945 28008064
    351616 5h2i:A (2.1) BS01 RET ? GO:0005216 ... P02945 28008064
    351617 5h2j:A (2.1) BS01 RET ? GO:0005216 ... P02945 28008064
    351618 5h2k:A (2.1) BS01 RET ? GO:0005216 ... P02945 28008064
    351619 5h2l:A (2.1) BS01 RET ? GO:0005216 ... P02945 28008064
    351620 5h2m:A (2.1) BS01 RET ? GO:0005216 ... P02945 28008064
    351621 5h2n:A (2.1) BS01 RET ? GO:0005216 ... P02945 28008064
    351622 5h2o:A (2.1) BS01 RET ? GO:0005216 ... P02945 28008064
    351623 5h2p:A (2.1) BS01 RET ? GO:0005216 ... P02945 28008064
    351624 5h2q:A (1.66) BS01 ZN 3.1.4.- GO:0004114 ... Q38F42 N/A
    351625 5h2q:A (1.66) BS02 LLI 3.1.4.- GO:0004114 ... Q38F42 N/A
    351626 5h2q:B (1.66) BS01 ZN 3.1.4.- GO:0004114 ... Q38F42 N/A
    351627 5h2q:B (1.66) BS02 LLI 3.1.4.- GO:0004114 ... Q38F42 N/A
    351628 5h2r:A (1.8) BS01 ZN 3.1.4.- GO:0004114 ... Q38F42 N/A
    351629 5h2r:A (1.8) BS02 LLN 3.1.4.- GO:0004114 ... Q38F42 N/A
    351630 5h2r:B (1.8) BS01 ZN 3.1.4.- GO:0004114 ... Q38F42 N/A
    351631 5h2r:B (1.8) BS02 LLN 3.1.4.- GO:0004114 ... Q38F42 N/A
    351632 5h2u:A (2.24) BS01 1N1 2.7.10.2 GO:0004672 ... Q13882 27993680 MOAD: ic50=7nM
    BindingDB: Kd=7.8nM, IC50=5.3nM
    351633 5h2u:B (2.24) BS01 1N1 2.7.10.2 GO:0004672 ... Q13882 27993680 MOAD: ic50=7nM
    BindingDB: Kd=7.8nM, IC50=5.3nM
    351634 5h2u:C (2.24) BS01 1N1 2.7.10.2 GO:0004672 ... Q13882 27993680 MOAD: ic50=7nM
    BindingDB: Kd=7.8nM, IC50=5.3nM
    351635 5h2u:D (2.24) BS01 1N1 2.7.10.2 GO:0004672 ... Q13882 27993680 MOAD: ic50=7nM
    BindingDB: Kd=7.8nM, IC50=5.3nM
    351636 5h2v:A (2.8) BS01 peptide ? GO:0005634 ... P32337 27939291
    351637 5h2w:A (2.5) BS01 peptide ? N/A Q02821 27939291
    351638 5h2w:C (2.5) BS01 peptide ? N/A Q02821 27939291
    351639 5h2x:A (2.2) BS01 peptide ? N/A Q02821 27939291
    351640 5h2z:A (1.58) BS01 FMN 1.3.5.2 GO:0004151 ... Q02127 N/A
    351641 5h2z:A (1.58) BS02 7GF 1.3.5.2 GO:0004151 ... Q02127 N/A
    351642 5h38:B (1.7) BS01 PO4 2.1.1.45 GO:0004799 ... P90463 27936107
    351643 5h39:A (2.0) BS01 UMP 2.1.1.45 GO:0004799 ... P90463 27936107
    351644 5h39:A (2.0) BS02 UMP 2.1.1.45 GO:0004799 ... P90463 27936107
    351645 5h39:B (2.0) BS01 UMP 2.1.1.45 GO:0004799 ... P90463 27936107
    351646 5h39:B (2.0) BS02 UMP 2.1.1.45 GO:0004799 ... P90463 27936107
    351647 5h3a:A (2.4) BS01 D16 2.1.1.45 GO:0004799 ... P90463 27936107
    351648 5h3a:A (2.4) BS02 UMP 2.1.1.45 GO:0004799 ... P90463 27936107
    351649 5h3a:A (2.4) BS03 UMP 2.1.1.45 GO:0004799 ... P90463 27936107
    351650 5h3a:B (2.4) BS01 UMP 2.1.1.45 GO:0004799 ... P90463 27936107
    351651 5h3a:B (2.4) BS02 D16 2.1.1.45 GO:0004799 ... P90463 27936107
    351652 5h3a:B (2.4) BS03 UMP 2.1.1.45 GO:0004799 ... P90463 27936107
    351653 5h3e:B (2.21) BS01 MG 1.1.1.42 GO:0000287 ... P54071 28852116
    351654 5h3f:A (3.29) BS01 MG 1.1.1.42 GO:0000287 ... P54071 28852116
    351655 5h3f:B (3.29) BS01 MG 1.1.1.42 GO:0000287 ... P54071 28852116
    351656 5h3h:A (1.9) BS01 F50 N/A GO:0003824 ... N/A 28125606
    351657 5h3h:B (1.9) BS01 F50 N/A GO:0003824 ... N/A 28125606
    351658 5h3j:A (1.33) BS01 peptide ? N/A Q99JX3 28049725
    351659 5h3j:A (1.33) BS02 ZN ? N/A Q99JX3 28049725
    351660 5h3o:A (3.5) BS01 PCG ? GO:0003031 ... Q03611 28099415
    351661 5h3o:B (3.5) BS01 PCG ? GO:0003031 ... Q03611 28099415
    351662 5h3o:C (3.5) BS01 PCG ? GO:0003031 ... Q03611 28099415
    351663 5h3o:D (3.5) BS01 PCG ? GO:0003031 ... Q03611 28099415
    351664 5h3q:A (2.1) BS01 7HF 2.7.10.1 GO:0004672 ... P04629 28159414 MOAD: ic50=6nM
    BindingDB: IC50=6.0nM
    351665 5h3r:A (2.67) BS01 dna ? GO:0003677 ... P27245 28124121
    351666 5h3r:A (2.67) BS02 dna ? GO:0003677 ... P27245 28124121
    351667 5h3r:B (2.67) BS01 dna ? GO:0003677 ... P27245 28124121
    351668 5h3r:B (2.67) BS02 dna ? GO:0003677 ... P27245 28124121
    351669 5h3t:A (2.571) BS01 MGT ? N/A Q8TEQ6 27834343
    351670 5h3t:B (2.571) BS01 MGT ? N/A Q8TEQ6 27834343
    351671 5h3t:C (2.571) BS01 MGT ? N/A Q8TEQ6 27834343
    351672 5h3t:D (2.571) BS01 MGT ? N/A Q8TEQ6 27834343
    351673 5h3u:A (2.499) BS01 rna ? N/A Q8TEQ6 27834343
    351674 5h3z:B (2.0) BS01 CA 2.4.1.333 GO:0005975 ... A9KJS6 28198470
    351675 5h40:A (2.2) BS01 BGC 2.4.1.333 GO:0005975 ... A9KJS6 28198470
    351676 5h40:A (2.2) BS02 BGC 2.4.1.333 GO:0005975 ... A9KJS6 28198470
    351677 5h40:B (2.2) BS01 BGC 2.4.1.333 GO:0005975 ... A9KJS6 28198470
    351678 5h40:B (2.2) BS02 BGC 2.4.1.333 GO:0005975 ... A9KJS6 28198470
    351679 5h41:A (2.0) BS01 GLC 2.4.1.333 GO:0005975 ... A9KJS6 28198470
    351680 5h41:A (2.0) BS02 BGC 2.4.1.333 GO:0005975 ... A9KJS6 28198470
    351681 5h41:A (2.0) BS03 IFM 2.4.1.333 GO:0005975 ... A9KJS6 28198470
    351682 5h41:B (2.0) BS01 GLC 2.4.1.333 GO:0005975 ... A9KJS6 28198470
    351683 5h41:B (2.0) BS02 BGC 2.4.1.333 GO:0005975 ... A9KJS6 28198470
    351684 5h41:B (2.0) BS03 IFM 2.4.1.333 GO:0005975 ... A9KJS6 28198470
    351685 5h42:A (2.1) BS01 G1P 2.4.1.333 GO:0005975 ... A9KJS6 28198470
    351686 5h42:B (2.1) BS01 G1P 2.4.1.333 GO:0005975 ... A9KJS6 28198470
    351687 5h42:B (2.1) BS02 G1P 2.4.1.333 GO:0005975 ... A9KJS6 28198470
    351688 5h42:B (2.1) BS03 GLC 2.4.1.333 GO:0005975 ... A9KJS6 28198470
    351689 5h43:A (2.3) BS01 peptide ? N/A P52292 28991411
    351690 5h43:A (2.3) BS02 peptide ? N/A P52292 28991411
    351691 5h47:A (2.3) BS01 FSW ? GO:0005769 ... Q2UNX8 28041800
    351692 5h47:A (2.3) BS02 FSW ? GO:0005769 ... Q2UNX8 28041800
    351693 5h47:A (2.3) BS03 FSW ? GO:0005769 ... Q2UNX8 28041800
    351694 5h47:A (2.3) BS04 FSW ? GO:0005769 ... Q2UNX8 28041800
    351695 5h47:A (2.3) BS05 FSW ? GO:0005769 ... Q2UNX8 28041800
    351696 5h47:A (2.3) BS06 FSW ? GO:0005769 ... Q2UNX8 28041800
    351697 5h47:A (2.3) BS07 FSW ? GO:0005769 ... Q2UNX8 28041800
    351698 5h47:B (2.3) BS01 FSW ? GO:0005769 ... Q2UNX8 28041800
    351699 5h47:B (2.3) BS02 FSW ? GO:0005769 ... Q2UNX8 28041800
    351700 5h47:B (2.3) BS03 FSW ? GO:0005769 ... Q2UNX8 28041800
    351701 5h47:B (2.3) BS04 FSW ? GO:0005769 ... Q2UNX8 28041800
    351702 5h47:B (2.3) BS05 FSW ? GO:0005769 ... Q2UNX8 28041800
    351703 5h47:B (2.3) BS06 FSW ? GO:0005769 ... Q2UNX8 28041800
    351704 5h47:C (2.3) BS01 FSW ? GO:0005769 ... Q2UNX8 28041800
    351705 5h47:C (2.3) BS02 FSW ? GO:0005769 ... Q2UNX8 28041800
    351706 5h47:C (2.3) BS03 FSW ? GO:0005769 ... Q2UNX8 28041800
    351707 5h47:C (2.3) BS04 FSW ? GO:0005769 ... Q2UNX8 28041800
    351708 5h47:C (2.3) BS05 FSW ? GO:0005769 ... Q2UNX8 28041800
    351709 5h47:C (2.3) BS06 FSW ? GO:0005769 ... Q2UNX8 28041800
    351710 5h47:D (2.3) BS01 FSW ? GO:0005769 ... Q2UNX8 28041800
    351711 5h47:D (2.3) BS02 FSW ? GO:0005769 ... Q2UNX8 28041800
    351712 5h47:D (2.3) BS03 FSW ? GO:0005769 ... Q2UNX8 28041800
    351713 5h47:D (2.3) BS04 FSW ? GO:0005769 ... Q2UNX8 28041800
    351714 5h47:D (2.3) BS05 FSW ? GO:0005769 ... Q2UNX8 28041800
    351715 5h47:D (2.3) BS06 FSW ? GO:0005769 ... Q2UNX8 28041800
    351716 5h47:E (2.3) BS01 FSW ? GO:0005769 ... Q2UNX8 28041800
    351717 5h47:E (2.3) BS02 FSW ? GO:0005769 ... Q2UNX8 28041800
    351718 5h47:E (2.3) BS03 FSW ? GO:0005769 ... Q2UNX8 28041800
    351719 5h47:E (2.3) BS04 FSW ? GO:0005769 ... Q2UNX8 28041800
    351720 5h47:E (2.3) BS05 FSW ? GO:0005769 ... Q2UNX8 28041800
    351721 5h47:E (2.3) BS06 FSW ? GO:0005769 ... Q2UNX8 28041800
    351722 5h47:F (2.3) BS01 FSW ? GO:0005769 ... Q2UNX8 28041800
    351723 5h47:F (2.3) BS02 FSW ? GO:0005769 ... Q2UNX8 28041800
    351724 5h47:F (2.3) BS03 FSW ? GO:0005769 ... Q2UNX8 28041800
    351725 5h47:F (2.3) BS04 FSW ? GO:0005769 ... Q2UNX8 28041800
    351726 5h47:F (2.3) BS05 FSW ? GO:0005769 ... Q2UNX8 28041800
    351727 5h47:F (2.3) BS06 FSW ? GO:0005769 ... Q2UNX8 28041800
    351728 5h47:G (2.3) BS01 FSW ? GO:0005769 ... Q2UNX8 28041800
    351729 5h47:G (2.3) BS02 FSW ? GO:0005769 ... Q2UNX8 28041800
    351730 5h47:G (2.3) BS03 FSW ? GO:0005769 ... Q2UNX8 28041800
    351731 5h47:G (2.3) BS04 FSW ? GO:0005769 ... Q2UNX8 28041800
    351732 5h47:G (2.3) BS05 FSW ? GO:0005769 ... Q2UNX8 28041800
    351733 5h47:G (2.3) BS06 FSW ? GO:0005769 ... Q2UNX8 28041800
    351734 5h47:H (2.3) BS01 FSW ? GO:0005769 ... Q2UNX8 28041800
    351735 5h47:H (2.3) BS02 FSW ? GO:0005769 ... Q2UNX8 28041800
    351736 5h47:H (2.3) BS03 FSW ? GO:0005769 ... Q2UNX8 28041800
    351737 5h47:H (2.3) BS04 FSW ? GO:0005769 ... Q2UNX8 28041800
    351738 5h47:H (2.3) BS05 FSW ? GO:0005769 ... Q2UNX8 28041800
    351739 5h47:H (2.3) BS06 FSW ? GO:0005769 ... Q2UNX8 28041800
    351740 5h47:I (2.3) BS01 FSW ? GO:0005769 ... Q2UNX8 28041800
    351741 5h47:I (2.3) BS02 FSW ? GO:0005769 ... Q2UNX8 28041800
    351742 5h47:I (2.3) BS03 FSW ? GO:0005769 ... Q2UNX8 28041800
    351743 5h47:I (2.3) BS04 FSW ? GO:0005769 ... Q2UNX8 28041800
    351744 5h47:I (2.3) BS05 FSW ? GO:0005769 ... Q2UNX8 28041800
    351745 5h47:I (2.3) BS06 FSW ? GO:0005769 ... Q2UNX8 28041800
    351746 5h47:J (2.3) BS01 FSW ? GO:0005769 ... Q2UNX8 28041800
    351747 5h47:J (2.3) BS02 FSW ? GO:0005769 ... Q2UNX8 28041800
    351748 5h47:J (2.3) BS03 FSW ? GO:0005769 ... Q2UNX8 28041800
    351749 5h47:J (2.3) BS04 FSW ? GO:0005769 ... Q2UNX8 28041800
    351750 5h47:J (2.3) BS05 FSW ? GO:0005769 ... Q2UNX8 28041800
    351751 5h47:J (2.3) BS06 FSW ? GO:0005769 ... Q2UNX8 28041800
    351752 5h47:J (2.3) BS07 FSW ? GO:0005769 ... Q2UNX8 28041800
    351753 5h47:K (2.3) BS01 FSW ? GO:0005769 ... Q2UNX8 28041800
    351754 5h47:K (2.3) BS02 FSW ? GO:0005769 ... Q2UNX8 28041800
    351755 5h47:K (2.3) BS03 FSW ? GO:0005769 ... Q2UNX8 28041800
    351756 5h47:K (2.3) BS04 FSW ? GO:0005769 ... Q2UNX8 28041800
    351757 5h47:K (2.3) BS05 FSW ? GO:0005769 ... Q2UNX8 28041800
    351758 5h47:K (2.3) BS06 FSW ? GO:0005769 ... Q2UNX8 28041800
    351759 5h47:K (2.3) BS07 FSW ? GO:0005769 ... Q2UNX8 28041800
    351760 5h47:L (2.3) BS01 FSW ? GO:0005769 ... Q2UNX8 28041800
    351761 5h47:L (2.3) BS02 FSW ? GO:0005769 ... Q2UNX8 28041800
    351762 5h47:L (2.3) BS03 FSW ? GO:0005769 ... Q2UNX8 28041800
    351763 5h47:L (2.3) BS04 FSW ? GO:0005769 ... Q2UNX8 28041800
    351764 5h47:L (2.3) BS05 FSW ? GO:0005769 ... Q2UNX8 28041800
    351765 5h47:L (2.3) BS06 FSW ? GO:0005769 ... Q2UNX8 28041800
    351766 5h4d:A (3.21) BS01 peptide 2.3.1.286 GO:0017136 ... Q9NTG7 N/A
    351767 5h4d:A (3.21) BS02 ZN 2.3.1.286 GO:0017136 ... Q9NTG7 N/A
    351768 5h4d:A (3.21) BS03 BBI 2.3.1.286 GO:0017136 ... Q9NTG7 N/A
    351769 5h4d:A (3.21) BS04 NAD 2.3.1.286 GO:0017136 ... Q9NTG7 N/A
    351770 5h4d:H (3.21) BS01 peptide 2.3.1.286 GO:0017136 ... Q9NTG7 N/A
    351771 5h4d:H (3.21) BS02 ZN 2.3.1.286 GO:0017136 ... Q9NTG7 N/A
    351772 5h4d:H (3.21) BS03 BBI 2.3.1.286 GO:0017136 ... Q9NTG7 N/A
    351773 5h4d:H (3.21) BS04 NAD 2.3.1.286 GO:0017136 ... Q9NTG7 N/A
    351774 5h4i:B (2.004) BS01 7HQ 3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003723 ... H8XX12 27940580
    351775 5h4j:A (1.8) BS01 FKM 3.6.1.23 GO:0000287 ... P33316 29748212 MOAD: Ki=0.13uM
    BindingDB: IC50=60nM
    351776 5h4p:A (3.07) BS01 rna ? GO:0002181 ... P0CX45 28112732
    351777 5h4p:B (3.07) BS01 rna ? GO:0000027 ... P14126 28112732
    351778 5h4p:C (3.07) BS01 rna ? GO:0002181 ... P10664 28112732
    351779 5h4p:C (3.07) BS02 rna ? GO:0002181 ... P10664 28112732
    351780 5h4p:D (3.07) BS01 rna ? GO:0000027 ... P26321 28112732
    351781 5h4p:D (3.07) BS02 rna ? GO:0000027 ... P26321 28112732
    351782 5h4p:E (3.07) BS01 rna ? GO:0000027 ... Q02326 28112732
    351783 5h4p:F (3.07) BS01 rna ? GO:0000463 ... P05737 28112732
    351784 5h4p:F (3.07) BS02 rna ? GO:0000463 ... P05737 28112732
    351785 5h4p:G (3.07) BS01 rna ? GO:0000470 ... P17076 28112732
    351786 5h4p:G (3.07) BS02 rna ? GO:0000470 ... P17076 28112732
    351787 5h4p:H (3.07) BS01 rna ? GO:0002181 ... P05738 28112732
    351788 5h4p:J (3.07) BS01 rna ? GO:0000027 ... P0C0W9 28112732
    351789 5h4p:J (3.07) BS02 rna ? GO:0000027 ... P0C0W9 28112732
    351790 5h4p:L (3.07) BS01 rna ? GO:0002181 ... Q12690 28112732
    351791 5h4p:L (3.07) BS02 rna ? GO:0002181 ... Q12690 28112732
    351792 5h4p:M (3.07) BS01 rna ? GO:0000027 ... P36105 28112732
    351793 5h4p:N (3.07) BS01 rna ? GO:0002181 ... P05748 28112732
    351794 5h4p:N (3.07) BS02 rna ? GO:0002181 ... P05748 28112732
    351795 5h4p:O (3.07) BS01 rna ? GO:0000470 ... P26784 28112732
    351796 5h4p:P (3.07) BS01 rna ? GO:0000448 ... P05740 28112732
    351797 5h4p:P (3.07) BS02 rna ? GO:0000448 ... P05740 28112732
    351798 5h4p:Q (3.07) BS01 rna ? GO:0002181 ... P0CX49 28112732
    351799 5h4p:R (3.07) BS01 rna ? GO:0002181 ... P0CX82 28112732
    351800 5h4p:S (3.07) BS01 rna ? GO:0002181 ... P0CX23 28112732

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).