SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    352401 5han:K (2.04) BS01 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352402 5han:K (2.04) BS02 MG 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352403 5han:K (2.04) BS03 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352404 5han:L (2.04) BS01 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352405 5han:L (2.04) BS02 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352406 5han:L (2.04) BS03 MG 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352407 5hao:A (2.182) BS01 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352408 5hao:A (2.182) BS02 MG 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352409 5hao:A (2.182) BS03 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352410 5hao:B (2.182) BS01 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352411 5hao:B (2.182) BS02 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352412 5hao:B (2.182) BS03 MG 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352413 5hao:C (2.182) BS01 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352414 5hao:C (2.182) BS02 MG 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352415 5hao:C (2.182) BS03 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352416 5hao:D (2.182) BS01 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352417 5hao:D (2.182) BS02 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352418 5hao:D (2.182) BS03 MG 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352419 5hao:E (2.182) BS01 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352420 5hao:E (2.182) BS02 MG 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352421 5hao:E (2.182) BS03 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352422 5hao:F (2.182) BS01 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352423 5hao:F (2.182) BS02 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352424 5hao:F (2.182) BS03 MG 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352425 5hat:A (2.0) BS01 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352426 5hat:A (2.0) BS02 MG 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352427 5hat:A (2.0) BS03 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352428 5hat:B (2.0) BS01 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352429 5hat:B (2.0) BS02 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352430 5hat:B (2.0) BS03 MG 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352431 5hat:C (2.0) BS01 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352432 5hat:C (2.0) BS02 MG 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352433 5hat:C (2.0) BS03 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352434 5hat:D (2.0) BS01 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352435 5hat:D (2.0) BS02 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352436 5hat:D (2.0) BS03 MG 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352437 5hat:E (2.0) BS01 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352438 5hat:E (2.0) BS02 MG 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352439 5hat:E (2.0) BS03 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352440 5hat:F (2.0) BS01 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352441 5hat:F (2.0) BS02 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352442 5hat:F (2.0) BS03 MG 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352443 5hat:G (2.0) BS01 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352444 5hat:G (2.0) BS02 MG 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352445 5hat:G (2.0) BS03 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352446 5hat:H (2.0) BS01 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352447 5hat:H (2.0) BS02 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352448 5hat:H (2.0) BS03 MG 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352449 5hat:I (2.0) BS01 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352450 5hat:I (2.0) BS02 MG 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352451 5hat:I (2.0) BS03 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352452 5hat:J (2.0) BS01 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352453 5hat:J (2.0) BS02 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352454 5hat:J (2.0) BS03 MG 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352455 5hat:K (2.0) BS01 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352456 5hat:K (2.0) BS02 MG 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352457 5hat:K (2.0) BS03 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352458 5hat:L (2.0) BS01 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352459 5hat:L (2.0) BS02 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352460 5hat:L (2.0) BS03 MG 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    352461 5hau:10 (3.0) BS01 rna ? GO:0005840 ... Q5SHP6 26809677
    352462 5hau:11 (3.0) BS01 rna ? GO:0005840 ... Q5SHQ6 26809677
    352463 5hau:11 (3.0) BS02 rna ? GO:0005840 ... Q5SHQ6 26809677
    352464 5hau:12 (3.0) BS01 rna ? GO:0005840 ... Q5SJE1 26809677
    352465 5hau:12 (3.0) BS02 ZN ? GO:0005840 ... Q5SJE1 26809677
    352466 5hau:13 (3.0) BS01 rna ? GO:0005840 ... P80339 26809677
    352467 5hau:13 (3.0) BS02 ZN ? GO:0005840 ... P80339 26809677
    352468 5hau:14 (3.0) BS01 rna ? GO:0000049 ... P35871 26809677
    352469 5hau:14 (3.0) BS02 MG ? GO:0000049 ... P35871 26809677
    352470 5hau:14 (3.0) BS03 ZN ? GO:0000049 ... P35871 26809677
    352471 5hau:15 (3.0) BS01 rna ? GO:0005840 ... P80340 26809677
    352472 5hau:15 (3.0) BS02 MG ? GO:0005840 ... P80340 26809677
    352473 5hau:16 (3.0) BS01 rna ? GO:0003735 ... Q5SKU1 26809677
    352474 5hau:17 (3.0) BS01 rna ? GO:0005737 ... Q5SHR2 26809677
    352475 5hau:17 (3.0) BS02 ZN ? GO:0005737 ... Q5SHR2 26809677
    352476 5hau:1C (3.0) BS01 rna ? GO:0000049 ... Q5SLP7 26809677
    352477 5hau:1D (3.0) BS01 rna ? GO:0002181 ... P60405 26809677
    352478 5hau:1D (3.0) BS02 rna ? GO:0002181 ... P60405 26809677
    352479 5hau:1E (3.0) BS01 rna ? GO:0003735 ... Q5SHN8 26809677
    352480 5hau:1E (3.0) BS02 MG ? GO:0003735 ... Q5SHN8 26809677
    352481 5hau:1E (3.0) BS03 MG ? GO:0003735 ... Q5SHN8 26809677
    352482 5hau:1F (3.0) BS01 rna ? GO:0003735 ... Q5SHN9 26809677
    352483 5hau:1F (3.0) BS02 peptide ? GO:0003735 ... Q5SHN9 26809677
    352484 5hau:1F (3.0) BS03 MG ? GO:0003735 ... Q5SHN9 26809677
    352485 5hau:1F (3.0) BS04 MG ? GO:0003735 ... Q5SHN9 26809677
    352486 5hau:1G (3.0) BS01 rna ? GO:0000049 ... Q5SHQ0 26809677
    352487 5hau:1G (3.0) BS02 rna ? GO:0000049 ... Q5SHQ0 26809677
    352488 5hau:1G (3.0) BS03 rna ? GO:0000049 ... Q5SHQ0 26809677
    352489 5hau:1G (3.0) BS04 MG ? GO:0000049 ... Q5SHQ0 26809677
    352490 5hau:1H (3.0) BS01 rna N/A N/A N/A 26809677
    352491 5hau:1J (3.0) BS01 rna ? GO:0005840 ... Q8VVE3 26809677
    352492 5hau:1K (3.0) BS01 rna ? GO:0003735 ... Q5SLP6 26809677
    352493 5hau:1L (3.0) BS01 rna ? GO:0003729 ... P60488 26809677
    352494 5hau:1L (3.0) BS02 MG ? GO:0003729 ... P60488 26809677
    352495 5hau:1M (3.0) BS01 rna ? GO:0003735 ... Q5SHP8 26809677
    352496 5hau:1M (3.0) BS02 rna ? GO:0003735 ... Q5SHP8 26809677
    352497 5hau:1N (3.0) BS01 rna ? GO:0003735 ... Q5SHQ7 26809677
    352498 5hau:1N (3.0) BS02 MG ? GO:0003735 ... Q5SHQ7 26809677
    352499 5hau:1N (3.0) BS03 MG ? GO:0003735 ... Q5SHQ7 26809677
    352500 5hau:1O (3.0) BS01 rna ? GO:0000049 ... P60489 26809677
    352501 5hau:1O (3.0) BS02 rna ? GO:0000049 ... P60489 26809677
    352502 5hau:1O (3.0) BS03 MG ? GO:0000049 ... P60489 26809677
    352503 5hau:1P (3.0) BS01 rna ? GO:0003735 ... Q9Z9H5 26809677
    352504 5hau:1Q (3.0) BS01 rna ? GO:0005737 ... Q5SHQ4 26809677
    352505 5hau:1Q (3.0) BS02 rna ? GO:0005737 ... Q5SHQ4 26809677
    352506 5hau:1R (3.0) BS01 rna ? GO:0003735 ... P60490 26809677
    352507 5hau:1R (3.0) BS02 rna ? GO:0003735 ... P60490 26809677
    352508 5hau:1S (3.0) BS01 rna ? GO:0000027 ... P60491 26809677
    352509 5hau:1S (3.0) BS02 MG ? GO:0000027 ... P60491 26809677
    352510 5hau:1S (3.0) BS03 MG ? GO:0000027 ... P60491 26809677
    352511 5hau:1S (3.0) BS04 MG ? GO:0000027 ... P60491 26809677
    352512 5hau:1T (3.0) BS01 rna ? GO:0003735 ... P60492 26809677
    352513 5hau:1T (3.0) BS02 MG ? GO:0003735 ... P60492 26809677
    352514 5hau:1T (3.0) BS03 MG ? GO:0003735 ... P60492 26809677
    352515 5hau:1T (3.0) BS04 MG ? GO:0003735 ... P60492 26809677
    352516 5hau:1U (3.0) BS01 rna ? GO:0003735 ... Q5SHP3 26809677
    352517 5hau:1U (3.0) BS02 MG ? GO:0003735 ... Q5SHP3 26809677
    352518 5hau:1V (3.0) BS01 rna ? GO:0005840 ... Q5SHP0 26809677
    352519 5hau:1W (3.0) BS01 rna ? GO:0005840 ... Q5SHP9 26809677
    352520 5hau:1W (3.0) BS02 ZN ? GO:0005840 ... Q5SHP9 26809677
    352521 5hau:1X (3.0) BS01 rna ? GO:0003723 ... Q5SHZ1 26809677
    352522 5hau:1X (3.0) BS02 rna ? GO:0003723 ... Q5SHZ1 26809677
    352523 5hau:1Y (3.0) BS01 rna ? GO:0003735 ... P60493 26809677
    352524 5hau:1Y (3.0) BS02 rna ? GO:0003735 ... P60493 26809677
    352525 5hau:1Y (3.0) BS03 MG ? GO:0003735 ... P60493 26809677
    352526 5hau:1Z (3.0) BS01 rna ? GO:0005840 ... P60494 26809677
    352527 5hau:1b (3.0) BS01 rna ? GO:0003735 ... P80371 26809677
    352528 5hau:1c (3.0) BS01 rna ? GO:0003729 ... P80372 26809677
    352529 5hau:1d (3.0) BS01 rna ? GO:0003735 ... P80373 26809677
    352530 5hau:1d (3.0) BS02 SF4 ? GO:0003735 ... P80373 26809677
    352531 5hau:1d (3.0) BS03 MG ? GO:0003735 ... P80373 26809677
    352532 5hau:1e (3.0) BS01 rna ? GO:0005840 ... Q5SHQ5 26809677
    352533 5hau:1f (3.0) BS01 rna ? GO:0003735 ... Q5SLP8 26809677
    352534 5hau:1g (3.0) BS01 rna ? GO:0000049 ... P17291 26809677
    352535 5hau:1h (3.0) BS01 rna N/A N/A N/A 26809677
    352536 5hau:1i (3.0) BS01 rna ? GO:0000049 ... P80374 26809677
    352537 5hau:1i (3.0) BS02 rna ? GO:0000049 ... P80374 26809677
    352538 5hau:1j (3.0) BS01 rna ? GO:0000049 ... Q5SHN7 26809677
    352539 5hau:1k (3.0) BS01 rna ? GO:0005840 ... P80376 26809677
    352540 5hau:1k (3.0) BS02 MG ? GO:0005840 ... P80376 26809677
    352541 5hau:1l (3.0) BS01 rna ? GO:0000049 ... Q5SHN3 26809677
    352542 5hau:1l (3.0) BS02 MG ? GO:0000049 ... Q5SHN3 26809677
    352543 5hau:1m (3.0) BS01 rna ? GO:0000049 ... P80377 26809677
    352544 5hau:1m (3.0) BS02 rna ? GO:0000049 ... P80377 26809677
    352545 5hau:1m (3.0) BS03 MG ? GO:0000049 ... P80377 26809677
    352546 5hau:1n (3.0) BS01 rna N/A N/A N/A 26809677
    352547 5hau:1n (3.0) BS02 ZN N/A N/A N/A 26809677
    352548 5hau:1o (3.0) BS01 rna ? GO:0005737 ... Q5SJ76 26809677
    352549 5hau:1o (3.0) BS02 rna ? GO:0005737 ... Q5SJ76 26809677
    352550 5hau:1p (3.0) BS01 rna ? GO:0003735 ... Q5SJH3 26809677
    352551 5hau:1q (3.0) BS01 rna N/A N/A N/A 26809677
    352552 5hau:1r (3.0) BS01 rna ? GO:0003735 ... Q5SLQ0 26809677
    352553 5hau:1s (3.0) BS01 rna ? GO:0000028 ... Q5SHP2 26809677
    352554 5hau:1t (3.0) BS01 rna ? GO:0005840 ... P80380 26809677
    352555 5hau:1z (3.0) BS01 rna ? GO:0003746 ... Q5SHN5
    Q5SLQ1
    26809677
    352556 5hau:1z (3.0) BS02 rna ? GO:0003746 ... Q5SHN5
    Q5SLQ1
    26809677
    352557 5hau:1z (3.0) BS03 rna ? GO:0003746 ... Q5SHN5
    Q5SLQ1
    26809677
    352558 5hau:1z (3.0) BS04 rna ? GO:0003746 ... Q5SHN5
    Q5SLQ1
    26809677
    352559 5hau:1z (3.0) BS05 GDP ? GO:0003746 ... Q5SHN5
    Q5SLQ1
    26809677
    352560 5hau:20 (3.0) BS01 rna ? GO:0005840 ... Q5SHP6 26809677
    352561 5hau:21 (3.0) BS01 rna ? GO:0005840 ... Q5SHQ6 26809677
    352562 5hau:21 (3.0) BS02 rna ? GO:0005840 ... Q5SHQ6 26809677
    352563 5hau:22 (3.0) BS01 rna ? GO:0005840 ... Q5SJE1 26809677
    352564 5hau:22 (3.0) BS02 ZN ? GO:0005840 ... Q5SJE1 26809677
    352565 5hau:23 (3.0) BS01 rna ? GO:0005840 ... P80339 26809677
    352566 5hau:23 (3.0) BS02 ZN ? GO:0005840 ... P80339 26809677
    352567 5hau:24 (3.0) BS01 rna ? GO:0000049 ... P35871 26809677
    352568 5hau:24 (3.0) BS02 ZN ? GO:0000049 ... P35871 26809677
    352569 5hau:25 (3.0) BS01 rna ? GO:0005840 ... P80340 26809677
    352570 5hau:25 (3.0) BS02 MG ? GO:0005840 ... P80340 26809677
    352571 5hau:26 (3.0) BS01 rna ? GO:0003735 ... Q5SKU1 26809677
    352572 5hau:27 (3.0) BS01 rna ? GO:0005737 ... Q5SHR2 26809677
    352573 5hau:27 (3.0) BS02 ZN ? GO:0005737 ... Q5SHR2 26809677
    352574 5hau:2C (3.0) BS01 rna ? GO:0000049 ... Q5SLP7 26809677
    352575 5hau:2D (3.0) BS01 rna ? GO:0002181 ... P60405 26809677
    352576 5hau:2D (3.0) BS02 rna ? GO:0002181 ... P60405 26809677
    352577 5hau:2D (3.0) BS03 MG ? GO:0002181 ... P60405 26809677
    352578 5hau:2E (3.0) BS01 rna ? GO:0003735 ... Q5SHN8 26809677
    352579 5hau:2F (3.0) BS01 rna ? GO:0003735 ... Q5SHN9 26809677
    352580 5hau:2F (3.0) BS02 MG ? GO:0003735 ... Q5SHN9 26809677
    352581 5hau:2G (3.0) BS01 rna ? GO:0000049 ... Q5SHQ0 26809677
    352582 5hau:2G (3.0) BS02 rna ? GO:0000049 ... Q5SHQ0 26809677
    352583 5hau:2G (3.0) BS03 rna ? GO:0000049 ... Q5SHQ0 26809677
    352584 5hau:2G (3.0) BS04 MG ? GO:0000049 ... Q5SHQ0 26809677
    352585 5hau:2H (3.0) BS01 rna N/A N/A N/A 26809677
    352586 5hau:2J (3.0) BS01 rna ? GO:0005840 ... Q8VVE3 26809677
    352587 5hau:2K (3.0) BS01 rna ? GO:0003735 ... Q5SLP6 26809677
    352588 5hau:2L (3.0) BS01 rna ? GO:0003729 ... P60488 26809677
    352589 5hau:2M (3.0) BS01 rna ? GO:0003735 ... Q5SHP8 26809677
    352590 5hau:2M (3.0) BS02 rna ? GO:0003735 ... Q5SHP8 26809677
    352591 5hau:2N (3.0) BS01 rna ? GO:0003735 ... Q5SHQ7 26809677
    352592 5hau:2O (3.0) BS01 rna ? GO:0000049 ... P60489 26809677
    352593 5hau:2O (3.0) BS02 rna ? GO:0000049 ... P60489 26809677
    352594 5hau:2P (3.0) BS01 rna ? GO:0003735 ... Q9Z9H5 26809677
    352595 5hau:2Q (3.0) BS01 rna ? GO:0005737 ... Q5SHQ4 26809677
    352596 5hau:2Q (3.0) BS02 rna ? GO:0005737 ... Q5SHQ4 26809677
    352597 5hau:2R (3.0) BS01 rna ? GO:0003735 ... P60490 26809677
    352598 5hau:2R (3.0) BS02 rna ? GO:0003735 ... P60490 26809677
    352599 5hau:2S (3.0) BS01 rna ? GO:0000027 ... P60491 26809677
    352600 5hau:2T (3.0) BS01 rna ? GO:0003735 ... P60492 26809677

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).