SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    353001 5hcq:1E (2.801) BS04 MG ? GO:0003735 ... Q5SHN8 26809677
    353002 5hcq:1E (2.801) BS05 MG ? GO:0003735 ... Q5SHN8 26809677
    353003 5hcq:1F (2.801) BS01 rna ? GO:0003735 ... Q5SHN9 26809677
    353004 5hcq:1F (2.801) BS02 MG ? GO:0003735 ... Q5SHN9 26809677
    353005 5hcq:1F (2.801) BS03 MG ? GO:0003735 ... Q5SHN9 26809677
    353006 5hcq:1F (2.801) BS04 MG ? GO:0003735 ... Q5SHN9 26809677
    353007 5hcq:1F (2.801) BS05 MG ? GO:0003735 ... Q5SHN9 26809677
    353008 5hcq:1F (2.801) BS06 MG ? GO:0003735 ... Q5SHN9 26809677
    353009 5hcq:1F (2.801) BS07 MG ? GO:0003735 ... Q5SHN9 26809677
    353010 5hcq:1F (2.801) BS08 MG ? GO:0003735 ... Q5SHN9 26809677
    353011 5hcq:1F (2.801) BS09 MG ? GO:0003735 ... Q5SHN9 26809677
    353012 5hcq:1F (2.801) BS10 MG ? GO:0003735 ... Q5SHN9 26809677
    353013 5hcq:1G (2.801) BS01 rna ? GO:0000049 ... Q5SHQ0 26809677
    353014 5hcq:1G (2.801) BS02 rna ? GO:0000049 ... Q5SHQ0 26809677
    353015 5hcq:1G (2.801) BS03 rna ? GO:0000049 ... Q5SHQ0 26809677
    353016 5hcq:1G (2.801) BS04 MG ? GO:0000049 ... Q5SHQ0 26809677
    353017 5hcq:1G (2.801) BS05 MG ? GO:0000049 ... Q5SHQ0 26809677
    353018 5hcq:1H (2.801) BS01 rna N/A N/A N/A 26809677
    353019 5hcq:1I (2.801) BS01 rna ? GO:0005840 ... Q5SLQ1 26809677
    353020 5hcq:1N (2.801) BS01 rna ? GO:0003729 ... P60488 26809677
    353021 5hcq:1N (2.801) BS02 MG ? GO:0003729 ... P60488 26809677
    353022 5hcq:1N (2.801) BS03 MG ? GO:0003729 ... P60488 26809677
    353023 5hcq:1O (2.801) BS01 rna ? GO:0003735 ... Q5SHP8 26809677
    353024 5hcq:1O (2.801) BS02 rna ? GO:0003735 ... Q5SHP8 26809677
    353025 5hcq:1P (2.801) BS01 rna ? GO:0003735 ... Q5SHQ7 26809677
    353026 5hcq:1P (2.801) BS02 MG ? GO:0003735 ... Q5SHQ7 26809677
    353027 5hcq:1P (2.801) BS03 MG ? GO:0003735 ... Q5SHQ7 26809677
    353028 5hcq:1P (2.801) BS04 MG ? GO:0003735 ... Q5SHQ7 26809677
    353029 5hcq:1Q (2.801) BS01 rna ? GO:0000049 ... P60489 26809677
    353030 5hcq:1Q (2.801) BS02 rna ? GO:0000049 ... P60489 26809677
    353031 5hcq:1Q (2.801) BS03 MG ? GO:0000049 ... P60489 26809677
    353032 5hcq:1Q (2.801) BS04 MG ? GO:0000049 ... P60489 26809677
    353033 5hcq:1Q (2.801) BS05 MG ? GO:0000049 ... P60489 26809677
    353034 5hcq:1Q (2.801) BS06 MG ? GO:0000049 ... P60489 26809677
    353035 5hcq:1R (2.801) BS01 rna ? GO:0003735 ... Q9Z9H5 26809677
    353036 5hcq:1R (2.801) BS02 MG ? GO:0003735 ... Q9Z9H5 26809677
    353037 5hcq:1S (2.801) BS01 rna ? GO:0005737 ... Q5SHQ4 26809677
    353038 5hcq:1S (2.801) BS02 rna ? GO:0005737 ... Q5SHQ4 26809677
    353039 5hcq:1T (2.801) BS01 rna ? GO:0003735 ... P60490 26809677
    353040 5hcq:1T (2.801) BS02 rna ? GO:0003735 ... P60490 26809677
    353041 5hcq:1U (2.801) BS01 rna ? GO:0000027 ... P60491 26809677
    353042 5hcq:1U (2.801) BS02 MG ? GO:0000027 ... P60491 26809677
    353043 5hcq:1U (2.801) BS03 MG ? GO:0000027 ... P60491 26809677
    353044 5hcq:1U (2.801) BS04 MG ? GO:0000027 ... P60491 26809677
    353045 5hcq:1U (2.801) BS05 MG ? GO:0000027 ... P60491 26809677
    353046 5hcq:1U (2.801) BS06 MG ? GO:0000027 ... P60491 26809677
    353047 5hcq:1V (2.801) BS01 rna ? GO:0003735 ... P60492 26809677
    353048 5hcq:1V (2.801) BS02 MG ? GO:0003735 ... P60492 26809677
    353049 5hcq:1V (2.801) BS03 MG ? GO:0003735 ... P60492 26809677
    353050 5hcq:1V (2.801) BS04 MG ? GO:0003735 ... P60492 26809677
    353051 5hcq:1V (2.801) BS05 MG ? GO:0003735 ... P60492 26809677
    353052 5hcq:1W (2.801) BS01 rna ? GO:0003735 ... Q5SHP3 26809677
    353053 5hcq:1W (2.801) BS02 MG ? GO:0003735 ... Q5SHP3 26809677
    353054 5hcq:1W (2.801) BS03 MG ? GO:0003735 ... Q5SHP3 26809677
    353055 5hcq:1W (2.801) BS04 MG ? GO:0003735 ... Q5SHP3 26809677
    353056 5hcq:1X (2.801) BS01 rna ? GO:0005840 ... Q5SHP0 26809677
    353057 5hcq:1X (2.801) BS02 MG ? GO:0005840 ... Q5SHP0 26809677
    353058 5hcq:1X (2.801) BS03 MG ? GO:0005840 ... Q5SHP0 26809677
    353059 5hcq:1X (2.801) BS04 MG ? GO:0005840 ... Q5SHP0 26809677
    353060 5hcq:1Y (2.801) BS01 rna ? GO:0005840 ... Q5SHP9 26809677
    353061 5hcq:1Y (2.801) BS02 ZN ? GO:0005840 ... Q5SHP9 26809677
    353062 5hcq:1Z (2.801) BS01 rna ? GO:0003723 ... Q5SHZ1 26809677
    353063 5hcq:1Z (2.801) BS02 rna ? GO:0003723 ... Q5SHZ1 26809677
    353064 5hcq:1b (2.801) BS01 rna ? GO:0003735 ... P80371 26809677
    353065 5hcq:1b (2.801) BS02 MG ? GO:0003735 ... P80371 26809677
    353066 5hcq:1b (2.801) BS03 MG ? GO:0003735 ... P80371 26809677
    353067 5hcq:1c (2.801) BS01 rna ? GO:0003729 ... P80372 26809677
    353068 5hcq:1d (2.801) BS01 rna ? GO:0003735 ... P80373 26809677
    353069 5hcq:1d (2.801) BS02 SF4 ? GO:0003735 ... P80373 26809677
    353070 5hcq:1d (2.801) BS03 MG ? GO:0003735 ... P80373 26809677
    353071 5hcq:1e (2.801) BS01 rna ? GO:0005840 ... Q5SHQ5 26809677
    353072 5hcq:1e (2.801) BS02 MG ? GO:0005840 ... Q5SHQ5 26809677
    353073 5hcq:1f (2.801) BS01 rna ? GO:0003735 ... Q5SLP8 26809677
    353074 5hcq:1g (2.801) BS01 rna ? GO:0000049 ... P17291 26809677
    353075 5hcq:1h (2.801) BS01 rna N/A N/A N/A 26809677
    353076 5hcq:1h (2.801) BS02 MG N/A N/A N/A 26809677
    353077 5hcq:1i (2.801) BS01 rna ? GO:0000049 ... P80374 26809677
    353078 5hcq:1i (2.801) BS02 rna ? GO:0000049 ... P80374 26809677
    353079 5hcq:1j (2.801) BS01 rna ? GO:0000049 ... Q5SHN7 26809677
    353080 5hcq:1k (2.801) BS01 rna ? GO:0005840 ... P80376 26809677
    353081 5hcq:1k (2.801) BS02 MG ? GO:0005840 ... P80376 26809677
    353082 5hcq:1l (2.801) BS01 rna ? GO:0000049 ... Q5SHN3 26809677
    353083 5hcq:1l (2.801) BS02 MG ? GO:0000049 ... Q5SHN3 26809677
    353084 5hcq:1m (2.801) BS01 rna ? GO:0000049 ... P80377 26809677
    353085 5hcq:1m (2.801) BS02 MG ? GO:0000049 ... P80377 26809677
    353086 5hcq:1n (2.801) BS01 rna N/A N/A N/A 26809677
    353087 5hcq:1n (2.801) BS02 ZN N/A N/A N/A 26809677
    353088 5hcq:1n (2.801) BS03 MG N/A N/A N/A 26809677
    353089 5hcq:1o (2.801) BS01 rna ? GO:0005737 ... Q5SJ76 26809677
    353090 5hcq:1o (2.801) BS02 rna ? GO:0005737 ... Q5SJ76 26809677
    353091 5hcq:1p (2.801) BS01 rna ? GO:0003735 ... Q5SJH3 26809677
    353092 5hcq:1q (2.801) BS01 rna N/A N/A N/A 26809677
    353093 5hcq:1r (2.801) BS01 rna ? GO:0003735 ... Q5SLQ0 26809677
    353094 5hcq:1r (2.801) BS02 MG ? GO:0003735 ... Q5SLQ0 26809677
    353095 5hcq:1s (2.801) BS01 rna ? GO:0000028 ... Q5SHP2 26809677
    353096 5hcq:1t (2.801) BS01 rna ? GO:0005840 ... P80380 26809677
    353097 5hcq:20 (2.801) BS01 rna ? GO:0003735 ... P60493 26809677
    353098 5hcq:20 (2.801) BS02 rna ? GO:0003735 ... P60493 26809677
    353099 5hcq:21 (2.801) BS01 rna ? GO:0005840 ... P60494 26809677
    353100 5hcq:22 (2.801) BS01 rna ? GO:0005840 ... Q5SHP6 26809677
    353101 5hcq:23 (2.801) BS01 rna ? GO:0005840 ... Q5SHQ6 26809677
    353102 5hcq:23 (2.801) BS02 rna ? GO:0005840 ... Q5SHQ6 26809677
    353103 5hcq:23 (2.801) BS03 MG ? GO:0005840 ... Q5SHQ6 26809677
    353104 5hcq:24 (2.801) BS01 rna ? GO:0005840 ... Q5SJE1 26809677
    353105 5hcq:24 (2.801) BS02 ZN ? GO:0005840 ... Q5SJE1 26809677
    353106 5hcq:25 (2.801) BS01 rna ? GO:0005840 ... P80339 26809677
    353107 5hcq:25 (2.801) BS02 ZN ? GO:0005840 ... P80339 26809677
    353108 5hcq:26 (2.801) BS01 rna ? GO:0000049 ... P35871 26809677
    353109 5hcq:26 (2.801) BS02 ZN ? GO:0000049 ... P35871 26809677
    353110 5hcq:27 (2.801) BS01 rna ? GO:0005840 ... P80340 26809677
    353111 5hcq:28 (2.801) BS01 rna ? GO:0003735 ... Q5SKU1 26809677
    353112 5hcq:29 (2.801) BS01 rna ? GO:0005737 ... Q5SHR2 26809677
    353113 5hcq:29 (2.801) BS02 ZN ? GO:0005737 ... Q5SHR2 26809677
    353114 5hcq:2D (2.801) BS01 rna ? GO:0002181 ... P60405 26809677
    353115 5hcq:2D (2.801) BS02 MG ? GO:0002181 ... P60405 26809677
    353116 5hcq:2D (2.801) BS03 MG ? GO:0002181 ... P60405 26809677
    353117 5hcq:2E (2.801) BS01 rna ? GO:0003735 ... Q5SHN8 26809677
    353118 5hcq:2E (2.801) BS02 MG ? GO:0003735 ... Q5SHN8 26809677
    353119 5hcq:2F (2.801) BS01 rna ? GO:0003735 ... Q5SHN9 26809677
    353120 5hcq:2F (2.801) BS02 MG ? GO:0003735 ... Q5SHN9 26809677
    353121 5hcq:2F (2.801) BS03 MG ? GO:0003735 ... Q5SHN9 26809677
    353122 5hcq:2F (2.801) BS04 MG ? GO:0003735 ... Q5SHN9 26809677
    353123 5hcq:2G (2.801) BS01 rna ? GO:0000049 ... Q5SHQ0 26809677
    353124 5hcq:2G (2.801) BS02 rna ? GO:0000049 ... Q5SHQ0 26809677
    353125 5hcq:2G (2.801) BS03 rna ? GO:0000049 ... Q5SHQ0 26809677
    353126 5hcq:2G (2.801) BS04 MG ? GO:0000049 ... Q5SHQ0 26809677
    353127 5hcq:2H (2.801) BS01 rna N/A N/A N/A 26809677
    353128 5hcq:2I (2.801) BS01 rna ? GO:0005840 ... Q5SLQ1 26809677
    353129 5hcq:2N (2.801) BS01 rna ? GO:0003729 ... P60488 26809677
    353130 5hcq:2O (2.801) BS01 rna ? GO:0003735 ... Q5SHP8 26809677
    353131 5hcq:2O (2.801) BS02 rna ? GO:0003735 ... Q5SHP8 26809677
    353132 5hcq:2P (2.801) BS01 rna ? GO:0003735 ... Q5SHQ7 26809677
    353133 5hcq:2Q (2.801) BS01 rna ? GO:0000049 ... P60489 26809677
    353134 5hcq:2Q (2.801) BS02 rna ? GO:0000049 ... P60489 26809677
    353135 5hcq:2Q (2.801) BS03 MG ? GO:0000049 ... P60489 26809677
    353136 5hcq:2Q (2.801) BS04 MG ? GO:0000049 ... P60489 26809677
    353137 5hcq:2Q (2.801) BS05 MG ? GO:0000049 ... P60489 26809677
    353138 5hcq:2R (2.801) BS01 rna ? GO:0003735 ... Q9Z9H5 26809677
    353139 5hcq:2S (2.801) BS01 rna ? GO:0005737 ... Q5SHQ4 26809677
    353140 5hcq:2S (2.801) BS02 rna ? GO:0005737 ... Q5SHQ4 26809677
    353141 5hcq:2T (2.801) BS01 rna ? GO:0003735 ... P60490 26809677
    353142 5hcq:2T (2.801) BS02 rna ? GO:0003735 ... P60490 26809677
    353143 5hcq:2U (2.801) BS01 rna ? GO:0000027 ... P60491 26809677
    353144 5hcq:2U (2.801) BS02 MG ? GO:0000027 ... P60491 26809677
    353145 5hcq:2V (2.801) BS01 rna ? GO:0003735 ... P60492 26809677
    353146 5hcq:2V (2.801) BS02 MG ? GO:0003735 ... P60492 26809677
    353147 5hcq:2V (2.801) BS03 MG ? GO:0003735 ... P60492 26809677
    353148 5hcq:2W (2.801) BS01 rna ? GO:0003735 ... Q5SHP3 26809677
    353149 5hcq:2W (2.801) BS02 MG ? GO:0003735 ... Q5SHP3 26809677
    353150 5hcq:2X (2.801) BS01 rna ? GO:0005840 ... Q5SHP0 26809677
    353151 5hcq:2Y (2.801) BS01 rna ? GO:0005840 ... Q5SHP9 26809677
    353152 5hcq:2Y (2.801) BS02 ZN ? GO:0005840 ... Q5SHP9 26809677
    353153 5hcq:2Z (2.801) BS01 rna ? GO:0003723 ... Q5SHZ1 26809677
    353154 5hcq:2Z (2.801) BS02 rna ? GO:0003723 ... Q5SHZ1 26809677
    353155 5hcq:2b (2.801) BS01 rna ? GO:0003735 ... P80371 26809677
    353156 5hcq:2c (2.801) BS01 rna ? GO:0003729 ... P80372 26809677
    353157 5hcq:2d (2.801) BS01 rna ? GO:0003735 ... P80373 26809677
    353158 5hcq:2d (2.801) BS02 SF4 ? GO:0003735 ... P80373 26809677
    353159 5hcq:2e (2.801) BS01 rna ? GO:0005840 ... Q5SHQ5 26809677
    353160 5hcq:2e (2.801) BS02 MG ? GO:0005840 ... Q5SHQ5 26809677
    353161 5hcq:2f (2.801) BS01 rna ? GO:0003735 ... Q5SLP8 26809677
    353162 5hcq:2f (2.801) BS02 MG ? GO:0003735 ... Q5SLP8 26809677
    353163 5hcq:2g (2.801) BS01 rna ? GO:0000049 ... P17291 26809677
    353164 5hcq:2h (2.801) BS01 rna N/A N/A N/A 26809677
    353165 5hcq:2i (2.801) BS01 rna ? GO:0000049 ... P80374 26809677
    353166 5hcq:2i (2.801) BS02 rna ? GO:0000049 ... P80374 26809677
    353167 5hcq:2j (2.801) BS01 rna ? GO:0000049 ... Q5SHN7 26809677
    353168 5hcq:2k (2.801) BS01 rna ? GO:0005840 ... P80376 26809677
    353169 5hcq:2k (2.801) BS02 MG ? GO:0005840 ... P80376 26809677
    353170 5hcq:2l (2.801) BS01 rna ? GO:0000049 ... Q5SHN3 26809677
    353171 5hcq:2l (2.801) BS02 MG ? GO:0000049 ... Q5SHN3 26809677
    353172 5hcq:2l (2.801) BS03 MG ? GO:0000049 ... Q5SHN3 26809677
    353173 5hcq:2m (2.801) BS01 rna ? GO:0000049 ... P80377 26809677
    353174 5hcq:2n (2.801) BS01 rna N/A N/A N/A 26809677
    353175 5hcq:2n (2.801) BS02 ZN N/A N/A N/A 26809677
    353176 5hcq:2n (2.801) BS03 MG N/A N/A N/A 26809677
    353177 5hcq:2o (2.801) BS01 rna ? GO:0005737 ... Q5SJ76 26809677
    353178 5hcq:2o (2.801) BS02 rna ? GO:0005737 ... Q5SJ76 26809677
    353179 5hcq:2p (2.801) BS01 rna ? GO:0003735 ... Q5SJH3 26809677
    353180 5hcq:2q (2.801) BS01 rna N/A N/A N/A 26809677
    353181 5hcq:2r (2.801) BS01 rna ? GO:0003735 ... Q5SLQ0 26809677
    353182 5hcq:2s (2.801) BS01 rna ? GO:0000028 ... Q5SHP2 26809677
    353183 5hcq:2t (2.801) BS01 rna ? GO:0005840 ... P80380 26809677
    353184 5hcr:10 (2.8) BS01 rna ? GO:0003735 ... P60493 26809677
    353185 5hcr:10 (2.8) BS02 rna ? GO:0003735 ... P60493 26809677
    353186 5hcr:11 (2.8) BS01 rna ? GO:0005840 ... P60494 26809677
    353187 5hcr:12 (2.8) BS01 rna ? GO:0005840 ... Q5SHP6 26809677
    353188 5hcr:13 (2.8) BS01 rna ? GO:0005840 ... Q5SHQ6 26809677
    353189 5hcr:13 (2.8) BS02 rna ? GO:0005840 ... Q5SHQ6 26809677
    353190 5hcr:14 (2.8) BS01 rna ? GO:0005840 ... Q5SJE1 26809677
    353191 5hcr:14 (2.8) BS02 ZN ? GO:0005840 ... Q5SJE1 26809677
    353192 5hcr:15 (2.8) BS01 rna ? GO:0005840 ... P80339 26809677
    353193 5hcr:15 (2.8) BS02 MG ? GO:0005840 ... P80339 26809677
    353194 5hcr:15 (2.8) BS03 MG ? GO:0005840 ... P80339 26809677
    353195 5hcr:15 (2.8) BS04 ZN ? GO:0005840 ... P80339 26809677
    353196 5hcr:15 (2.8) BS05 MG ? GO:0005840 ... P80339 26809677
    353197 5hcr:16 (2.8) BS01 rna ? GO:0000049 ... P35871 26809677
    353198 5hcr:16 (2.8) BS02 MG ? GO:0000049 ... P35871 26809677
    353199 5hcr:16 (2.8) BS03 ZN ? GO:0000049 ... P35871 26809677
    353200 5hcr:17 (2.8) BS01 rna ? GO:0005840 ... P80340 26809677

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).