SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    353201 5hcr:17 (2.8) BS02 MG ? GO:0005840 ... P80340 26809677
    353202 5hcr:17 (2.8) BS03 MG ? GO:0005840 ... P80340 26809677
    353203 5hcr:18 (2.8) BS01 rna ? GO:0003735 ... Q5SKU1 26809677
    353204 5hcr:18 (2.8) BS02 MG ? GO:0003735 ... Q5SKU1 26809677
    353205 5hcr:19 (2.8) BS01 rna ? GO:0005737 ... Q5SHR2 26809677
    353206 5hcr:19 (2.8) BS02 ZN ? GO:0005737 ... Q5SHR2 26809677
    353207 5hcr:1D (2.8) BS01 rna ? GO:0002181 ... P60405 26809677
    353208 5hcr:1D (2.8) BS02 rna ? GO:0002181 ... P60405 26809677
    353209 5hcr:1D (2.8) BS03 MG ? GO:0002181 ... P60405 26809677
    353210 5hcr:1D (2.8) BS04 MG ? GO:0002181 ... P60405 26809677
    353211 5hcr:1D (2.8) BS05 MG ? GO:0002181 ... P60405 26809677
    353212 5hcr:1D (2.8) BS06 MG ? GO:0002181 ... P60405 26809677
    353213 5hcr:1D (2.8) BS07 MG ? GO:0002181 ... P60405 26809677
    353214 5hcr:1D (2.8) BS08 MG ? GO:0002181 ... P60405 26809677
    353215 5hcr:1D (2.8) BS09 MG ? GO:0002181 ... P60405 26809677
    353216 5hcr:1D (2.8) BS10 MG ? GO:0002181 ... P60405 26809677
    353217 5hcr:1D (2.8) BS11 MG ? GO:0002181 ... P60405 26809677
    353218 5hcr:1D (2.8) BS12 MG ? GO:0002181 ... P60405 26809677
    353219 5hcr:1E (2.8) BS01 rna ? GO:0003735 ... Q5SHN8 26809677
    353220 5hcr:1E (2.8) BS02 MG ? GO:0003735 ... Q5SHN8 26809677
    353221 5hcr:1F (2.8) BS01 rna ? GO:0003735 ... Q5SHN9 26809677
    353222 5hcr:1F (2.8) BS02 MG ? GO:0003735 ... Q5SHN9 26809677
    353223 5hcr:1F (2.8) BS03 MG ? GO:0003735 ... Q5SHN9 26809677
    353224 5hcr:1F (2.8) BS04 MG ? GO:0003735 ... Q5SHN9 26809677
    353225 5hcr:1F (2.8) BS05 MG ? GO:0003735 ... Q5SHN9 26809677
    353226 5hcr:1F (2.8) BS06 MG ? GO:0003735 ... Q5SHN9 26809677
    353227 5hcr:1F (2.8) BS07 MG ? GO:0003735 ... Q5SHN9 26809677
    353228 5hcr:1G (2.8) BS01 rna ? GO:0000049 ... Q5SHQ0 26809677
    353229 5hcr:1G (2.8) BS02 rna ? GO:0000049 ... Q5SHQ0 26809677
    353230 5hcr:1G (2.8) BS03 rna ? GO:0000049 ... Q5SHQ0 26809677
    353231 5hcr:1G (2.8) BS04 MG ? GO:0000049 ... Q5SHQ0 26809677
    353232 5hcr:1H (2.8) BS01 rna N/A N/A N/A 26809677
    353233 5hcr:1H (2.8) BS02 MG N/A N/A N/A 26809677
    353234 5hcr:1I (2.8) BS01 rna ? GO:0005840 ... Q5SLQ1 26809677
    353235 5hcr:1N (2.8) BS01 rna ? GO:0003729 ... P60488 26809677
    353236 5hcr:1N (2.8) BS02 MG ? GO:0003729 ... P60488 26809677
    353237 5hcr:1O (2.8) BS01 rna ? GO:0003735 ... Q5SHP8 26809677
    353238 5hcr:1O (2.8) BS02 rna ? GO:0003735 ... Q5SHP8 26809677
    353239 5hcr:1P (2.8) BS01 rna ? GO:0003735 ... Q5SHQ7 26809677
    353240 5hcr:1P (2.8) BS02 MG ? GO:0003735 ... Q5SHQ7 26809677
    353241 5hcr:1P (2.8) BS03 MG ? GO:0003735 ... Q5SHQ7 26809677
    353242 5hcr:1P (2.8) BS04 MG ? GO:0003735 ... Q5SHQ7 26809677
    353243 5hcr:1Q (2.8) BS01 rna ? GO:0000049 ... P60489 26809677
    353244 5hcr:1Q (2.8) BS02 rna ? GO:0000049 ... P60489 26809677
    353245 5hcr:1Q (2.8) BS03 MG ? GO:0000049 ... P60489 26809677
    353246 5hcr:1Q (2.8) BS04 MG ? GO:0000049 ... P60489 26809677
    353247 5hcr:1Q (2.8) BS05 MG ? GO:0000049 ... P60489 26809677
    353248 5hcr:1Q (2.8) BS06 MG ? GO:0000049 ... P60489 26809677
    353249 5hcr:1R (2.8) BS01 rna ? GO:0003735 ... Q9Z9H5 26809677
    353250 5hcr:1R (2.8) BS02 MG ? GO:0003735 ... Q9Z9H5 26809677
    353251 5hcr:1R (2.8) BS03 MG ? GO:0003735 ... Q9Z9H5 26809677
    353252 5hcr:1S (2.8) BS01 rna ? GO:0005737 ... Q5SHQ4 26809677
    353253 5hcr:1S (2.8) BS02 rna ? GO:0005737 ... Q5SHQ4 26809677
    353254 5hcr:1T (2.8) BS01 rna ? GO:0003735 ... P60490 26809677
    353255 5hcr:1T (2.8) BS02 rna ? GO:0003735 ... P60490 26809677
    353256 5hcr:1U (2.8) BS01 rna ? GO:0000027 ... P60491 26809677
    353257 5hcr:1U (2.8) BS02 MG ? GO:0000027 ... P60491 26809677
    353258 5hcr:1U (2.8) BS03 MG ? GO:0000027 ... P60491 26809677
    353259 5hcr:1U (2.8) BS04 MG ? GO:0000027 ... P60491 26809677
    353260 5hcr:1U (2.8) BS05 MG ? GO:0000027 ... P60491 26809677
    353261 5hcr:1U (2.8) BS06 MG ? GO:0000027 ... P60491 26809677
    353262 5hcr:1U (2.8) BS07 MG ? GO:0000027 ... P60491 26809677
    353263 5hcr:1V (2.8) BS01 rna ? GO:0003735 ... P60492 26809677
    353264 5hcr:1V (2.8) BS02 MG ? GO:0003735 ... P60492 26809677
    353265 5hcr:1V (2.8) BS03 MG ? GO:0003735 ... P60492 26809677
    353266 5hcr:1V (2.8) BS04 MG ? GO:0003735 ... P60492 26809677
    353267 5hcr:1V (2.8) BS05 MG ? GO:0003735 ... P60492 26809677
    353268 5hcr:1V (2.8) BS06 MG ? GO:0003735 ... P60492 26809677
    353269 5hcr:1W (2.8) BS01 rna ? GO:0003735 ... Q5SHP3 26809677
    353270 5hcr:1W (2.8) BS02 MG ? GO:0003735 ... Q5SHP3 26809677
    353271 5hcr:1W (2.8) BS03 MG ? GO:0003735 ... Q5SHP3 26809677
    353272 5hcr:1W (2.8) BS04 MG ? GO:0003735 ... Q5SHP3 26809677
    353273 5hcr:1X (2.8) BS01 rna ? GO:0005840 ... Q5SHP0 26809677
    353274 5hcr:1X (2.8) BS02 MG ? GO:0005840 ... Q5SHP0 26809677
    353275 5hcr:1Y (2.8) BS01 rna ? GO:0005840 ... Q5SHP9 26809677
    353276 5hcr:1Y (2.8) BS02 ZN ? GO:0005840 ... Q5SHP9 26809677
    353277 5hcr:1Z (2.8) BS01 rna ? GO:0003723 ... Q5SHZ1 26809677
    353278 5hcr:1Z (2.8) BS02 rna ? GO:0003723 ... Q5SHZ1 26809677
    353279 5hcr:1Z (2.8) BS03 MG ? GO:0003723 ... Q5SHZ1 26809677
    353280 5hcr:1b (2.8) BS01 rna ? GO:0003735 ... P80371 26809677
    353281 5hcr:1b (2.8) BS02 MG ? GO:0003735 ... P80371 26809677
    353282 5hcr:1c (2.8) BS01 rna ? GO:0003729 ... P80372 26809677
    353283 5hcr:1d (2.8) BS01 rna ? GO:0003735 ... P80373 26809677
    353284 5hcr:1d (2.8) BS02 SF4 ? GO:0003735 ... P80373 26809677
    353285 5hcr:1d (2.8) BS03 MG ? GO:0003735 ... P80373 26809677
    353286 5hcr:1e (2.8) BS01 rna ? GO:0005840 ... Q5SHQ5 26809677
    353287 5hcr:1e (2.8) BS02 MG ? GO:0005840 ... Q5SHQ5 26809677
    353288 5hcr:1e (2.8) BS03 MG ? GO:0005840 ... Q5SHQ5 26809677
    353289 5hcr:1e (2.8) BS04 MG ? GO:0005840 ... Q5SHQ5 26809677
    353290 5hcr:1f (2.8) BS01 rna ? GO:0003735 ... Q5SLP8 26809677
    353291 5hcr:1g (2.8) BS01 rna ? GO:0000049 ... P17291 26809677
    353292 5hcr:1h (2.8) BS01 rna N/A N/A N/A 26809677
    353293 5hcr:1h (2.8) BS02 MG N/A N/A N/A 26809677
    353294 5hcr:1i (2.8) BS01 rna ? GO:0000049 ... P80374 26809677
    353295 5hcr:1j (2.8) BS01 rna ? GO:0000049 ... Q5SHN7 26809677
    353296 5hcr:1k (2.8) BS01 rna ? GO:0005840 ... P80376 26809677
    353297 5hcr:1k (2.8) BS02 MG ? GO:0005840 ... P80376 26809677
    353298 5hcr:1l (2.8) BS01 rna ? GO:0000049 ... Q5SHN3 26809677
    353299 5hcr:1l (2.8) BS02 MG ? GO:0000049 ... Q5SHN3 26809677
    353300 5hcr:1m (2.8) BS01 rna ? GO:0000049 ... P80377 26809677
    353301 5hcr:1m (2.8) BS02 MG ? GO:0000049 ... P80377 26809677
    353302 5hcr:1n (2.8) BS01 rna N/A N/A N/A 26809677
    353303 5hcr:1n (2.8) BS02 ZN N/A N/A N/A 26809677
    353304 5hcr:1n (2.8) BS03 MG N/A N/A N/A 26809677
    353305 5hcr:1o (2.8) BS01 rna ? GO:0005737 ... Q5SJ76 26809677
    353306 5hcr:1o (2.8) BS02 rna ? GO:0005737 ... Q5SJ76 26809677
    353307 5hcr:1p (2.8) BS01 rna ? GO:0003735 ... Q5SJH3 26809677
    353308 5hcr:1q (2.8) BS01 rna N/A N/A N/A 26809677
    353309 5hcr:1r (2.8) BS01 rna ? GO:0003735 ... Q5SLQ0 26809677
    353310 5hcr:1r (2.8) BS02 MG ? GO:0003735 ... Q5SLQ0 26809677
    353311 5hcr:1s (2.8) BS01 rna ? GO:0000028 ... Q5SHP2 26809677
    353312 5hcr:1t (2.8) BS01 rna ? GO:0005840 ... P80380 26809677
    353313 5hcr:20 (2.8) BS01 rna ? GO:0003735 ... P60493 26809677
    353314 5hcr:20 (2.8) BS02 rna ? GO:0003735 ... P60493 26809677
    353315 5hcr:21 (2.8) BS01 rna ? GO:0005840 ... P60494 26809677
    353316 5hcr:22 (2.8) BS01 rna ? GO:0005840 ... Q5SHP6 26809677
    353317 5hcr:23 (2.8) BS01 rna ? GO:0005840 ... Q5SHQ6 26809677
    353318 5hcr:23 (2.8) BS02 rna ? GO:0005840 ... Q5SHQ6 26809677
    353319 5hcr:23 (2.8) BS03 MG ? GO:0005840 ... Q5SHQ6 26809677
    353320 5hcr:24 (2.8) BS01 rna ? GO:0005840 ... Q5SJE1 26809677
    353321 5hcr:24 (2.8) BS02 ZN ? GO:0005840 ... Q5SJE1 26809677
    353322 5hcr:25 (2.8) BS01 rna ? GO:0005840 ... P80339 26809677
    353323 5hcr:25 (2.8) BS02 ZN ? GO:0005840 ... P80339 26809677
    353324 5hcr:26 (2.8) BS01 rna ? GO:0000049 ... P35871 26809677
    353325 5hcr:26 (2.8) BS02 ZN ? GO:0000049 ... P35871 26809677
    353326 5hcr:27 (2.8) BS01 rna ? GO:0005840 ... P80340 26809677
    353327 5hcr:28 (2.8) BS01 rna ? GO:0003735 ... Q5SKU1 26809677
    353328 5hcr:29 (2.8) BS01 rna ? GO:0005737 ... Q5SHR2 26809677
    353329 5hcr:29 (2.8) BS02 ZN ? GO:0005737 ... Q5SHR2 26809677
    353330 5hcr:2D (2.8) BS01 rna ? GO:0002181 ... P60405 26809677
    353331 5hcr:2D (2.8) BS02 rna ? GO:0002181 ... P60405 26809677
    353332 5hcr:2D (2.8) BS03 MG ? GO:0002181 ... P60405 26809677
    353333 5hcr:2D (2.8) BS04 MG ? GO:0002181 ... P60405 26809677
    353334 5hcr:2D (2.8) BS05 MG ? GO:0002181 ... P60405 26809677
    353335 5hcr:2D (2.8) BS06 MG ? GO:0002181 ... P60405 26809677
    353336 5hcr:2E (2.8) BS01 rna ? GO:0003735 ... Q5SHN8 26809677
    353337 5hcr:2E (2.8) BS02 MG ? GO:0003735 ... Q5SHN8 26809677
    353338 5hcr:2E (2.8) BS03 MG ? GO:0003735 ... Q5SHN8 26809677
    353339 5hcr:2F (2.8) BS01 rna ? GO:0003735 ... Q5SHN9 26809677
    353340 5hcr:2F (2.8) BS02 MG ? GO:0003735 ... Q5SHN9 26809677
    353341 5hcr:2F (2.8) BS03 MG ? GO:0003735 ... Q5SHN9 26809677
    353342 5hcr:2F (2.8) BS04 MG ? GO:0003735 ... Q5SHN9 26809677
    353343 5hcr:2F (2.8) BS05 MG ? GO:0003735 ... Q5SHN9 26809677
    353344 5hcr:2G (2.8) BS01 rna ? GO:0000049 ... Q5SHQ0 26809677
    353345 5hcr:2G (2.8) BS02 rna ? GO:0000049 ... Q5SHQ0 26809677
    353346 5hcr:2G (2.8) BS03 rna ? GO:0000049 ... Q5SHQ0 26809677
    353347 5hcr:2G (2.8) BS04 MG ? GO:0000049 ... Q5SHQ0 26809677
    353348 5hcr:2H (2.8) BS01 rna N/A N/A N/A 26809677
    353349 5hcr:2I (2.8) BS01 rna ? GO:0005840 ... Q5SLQ1 26809677
    353350 5hcr:2N (2.8) BS01 rna ? GO:0003729 ... P60488 26809677
    353351 5hcr:2O (2.8) BS01 rna ? GO:0003735 ... Q5SHP8 26809677
    353352 5hcr:2O (2.8) BS02 rna ? GO:0003735 ... Q5SHP8 26809677
    353353 5hcr:2P (2.8) BS01 rna ? GO:0003735 ... Q5SHQ7 26809677
    353354 5hcr:2Q (2.8) BS01 rna ? GO:0000049 ... P60489 26809677
    353355 5hcr:2Q (2.8) BS02 rna ? GO:0000049 ... P60489 26809677
    353356 5hcr:2Q (2.8) BS03 MG ? GO:0000049 ... P60489 26809677
    353357 5hcr:2Q (2.8) BS04 MG ? GO:0000049 ... P60489 26809677
    353358 5hcr:2Q (2.8) BS05 MG ? GO:0000049 ... P60489 26809677
    353359 5hcr:2R (2.8) BS01 rna ? GO:0003735 ... Q9Z9H5 26809677
    353360 5hcr:2S (2.8) BS01 rna ? GO:0005737 ... Q5SHQ4 26809677
    353361 5hcr:2S (2.8) BS02 rna ? GO:0005737 ... Q5SHQ4 26809677
    353362 5hcr:2T (2.8) BS01 rna ? GO:0003735 ... P60490 26809677
    353363 5hcr:2T (2.8) BS02 rna ? GO:0003735 ... P60490 26809677
    353364 5hcr:2U (2.8) BS01 rna ? GO:0000027 ... P60491 26809677
    353365 5hcr:2U (2.8) BS02 MG ? GO:0000027 ... P60491 26809677
    353366 5hcr:2V (2.8) BS01 rna ? GO:0003735 ... P60492 26809677
    353367 5hcr:2V (2.8) BS02 MG ? GO:0003735 ... P60492 26809677
    353368 5hcr:2W (2.8) BS01 rna ? GO:0003735 ... Q5SHP3 26809677
    353369 5hcr:2W (2.8) BS02 MG ? GO:0003735 ... Q5SHP3 26809677
    353370 5hcr:2X (2.8) BS01 rna ? GO:0005840 ... Q5SHP0 26809677
    353371 5hcr:2Y (2.8) BS01 rna ? GO:0005840 ... Q5SHP9 26809677
    353372 5hcr:2Y (2.8) BS02 ZN ? GO:0005840 ... Q5SHP9 26809677
    353373 5hcr:2Z (2.8) BS01 rna ? GO:0003723 ... Q5SHZ1 26809677
    353374 5hcr:2Z (2.8) BS02 rna ? GO:0003723 ... Q5SHZ1 26809677
    353375 5hcr:2b (2.8) BS01 rna ? GO:0003735 ... P80371 26809677
    353376 5hcr:2c (2.8) BS01 rna ? GO:0003729 ... P80372 26809677
    353377 5hcr:2d (2.8) BS01 rna ? GO:0003735 ... P80373 26809677
    353378 5hcr:2d (2.8) BS02 SF4 ? GO:0003735 ... P80373 26809677
    353379 5hcr:2e (2.8) BS01 rna ? GO:0005840 ... Q5SHQ5 26809677
    353380 5hcr:2e (2.8) BS02 MG ? GO:0005840 ... Q5SHQ5 26809677
    353381 5hcr:2f (2.8) BS01 rna ? GO:0003735 ... Q5SLP8 26809677
    353382 5hcr:2f (2.8) BS02 MG ? GO:0003735 ... Q5SLP8 26809677
    353383 5hcr:2g (2.8) BS01 rna ? GO:0000049 ... P17291 26809677
    353384 5hcr:2h (2.8) BS01 rna N/A N/A N/A 26809677
    353385 5hcr:2i (2.8) BS01 rna ? GO:0000049 ... P80374 26809677
    353386 5hcr:2j (2.8) BS01 rna ? GO:0000049 ... Q5SHN7 26809677
    353387 5hcr:2k (2.8) BS01 rna ? GO:0005840 ... P80376 26809677
    353388 5hcr:2l (2.8) BS01 rna ? GO:0000049 ... Q5SHN3 26809677
    353389 5hcr:2l (2.8) BS02 MG ? GO:0000049 ... Q5SHN3 26809677
    353390 5hcr:2l (2.8) BS03 MG ? GO:0000049 ... Q5SHN3 26809677
    353391 5hcr:2m (2.8) BS01 rna ? GO:0000049 ... P80377 26809677
    353392 5hcr:2n (2.8) BS01 rna N/A N/A N/A 26809677
    353393 5hcr:2n (2.8) BS02 ZN N/A N/A N/A 26809677
    353394 5hcr:2o (2.8) BS01 rna ? GO:0005737 ... Q5SJ76 26809677
    353395 5hcr:2o (2.8) BS02 rna ? GO:0005737 ... Q5SJ76 26809677
    353396 5hcr:2p (2.8) BS01 rna ? GO:0003735 ... Q5SJH3 26809677
    353397 5hcr:2q (2.8) BS01 rna N/A N/A N/A 26809677
    353398 5hcr:2r (2.8) BS01 rna ? GO:0003735 ... Q5SLQ0 26809677
    353399 5hcr:2s (2.8) BS01 rna ? GO:0000028 ... Q5SHP2 26809677
    353400 5hcr:2t (2.8) BS01 rna ? GO:0005840 ... P80380 26809677

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).