SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    353401 5hcr:2t (2.8) BS02 MG ? GO:0005840 ... P80380 26809677
    353402 5hct:A (1.36) BS01 61P 3.4.23.22 GO:0004190 ... P11838 27400756 MOAD: Ki=0.0254uM
    353403 5hcv:A (2.5) BS01 60R ? N/A P08235 26897089 MOAD: Ki=2nM
    353404 5hcv:B (2.5) BS01 60R ? N/A P08235 26897089 MOAD: Ki=2nM
    353405 5hcv:C (2.5) BS01 60R ? N/A P08235 26897089 MOAD: Ki=2nM
    353406 5hcx:A (2.6) BS01 60B 2.7.10.1 GO:0004672 ... P00533 27564586
    353407 5hcy:A (2.46) BS01 60D 2.7.10.1 GO:0004672 ... P00533 27564586 MOAD: Ki=1.2nM
    353408 5hcz:A (2.62) BS01 60E 2.7.10.1 GO:0004672 ... P00533 27564586
    353409 5hd0:A (1.65) BS01 60Y 3.4.23.46 GO:0004190 ... P56817 26937601 MOAD: Ki=4nM
    353410 5hd0:B (1.65) BS01 60Y 3.4.23.46 GO:0004190 ... P56817 26937601 MOAD: Ki=4nM
    353411 5hd1:10 (2.7) BS01 rna ? GO:0003735 ... P60493 26809677
    353412 5hd1:10 (2.7) BS02 rna ? GO:0003735 ... P60493 26809677
    353413 5hd1:10 (2.7) BS03 MG ? GO:0003735 ... P60493 26809677
    353414 5hd1:10 (2.7) BS04 MG ? GO:0003735 ... P60493 26809677
    353415 5hd1:11 (2.7) BS01 rna ? GO:0005840 ... P60494 26809677
    353416 5hd1:12 (2.7) BS01 rna ? GO:0005840 ... Q5SHP6 26809677
    353417 5hd1:13 (2.7) BS01 rna ? GO:0005840 ... Q5SHQ6 26809677
    353418 5hd1:13 (2.7) BS02 rna ? GO:0005840 ... Q5SHQ6 26809677
    353419 5hd1:14 (2.7) BS01 rna ? GO:0005840 ... Q5SJE1 26809677
    353420 5hd1:14 (2.7) BS02 ZN ? GO:0005840 ... Q5SJE1 26809677
    353421 5hd1:15 (2.7) BS01 rna ? GO:0005840 ... P80339 26809677
    353422 5hd1:15 (2.7) BS02 MG ? GO:0005840 ... P80339 26809677
    353423 5hd1:15 (2.7) BS03 MG ? GO:0005840 ... P80339 26809677
    353424 5hd1:15 (2.7) BS04 ZN ? GO:0005840 ... P80339 26809677
    353425 5hd1:15 (2.7) BS05 MG ? GO:0005840 ... P80339 26809677
    353426 5hd1:16 (2.7) BS01 rna ? GO:0000049 ... P35871 26809677
    353427 5hd1:16 (2.7) BS02 MG ? GO:0000049 ... P35871 26809677
    353428 5hd1:16 (2.7) BS03 ZN ? GO:0000049 ... P35871 26809677
    353429 5hd1:17 (2.7) BS01 rna ? GO:0005840 ... P80340 26809677
    353430 5hd1:17 (2.7) BS02 MG ? GO:0005840 ... P80340 26809677
    353431 5hd1:17 (2.7) BS03 MG ? GO:0005840 ... P80340 26809677
    353432 5hd1:18 (2.7) BS01 rna ? GO:0003735 ... Q5SKU1 26809677
    353433 5hd1:18 (2.7) BS02 MG ? GO:0003735 ... Q5SKU1 26809677
    353434 5hd1:19 (2.7) BS01 rna ? GO:0005737 ... Q5SHR2 26809677
    353435 5hd1:19 (2.7) BS02 ZN ? GO:0005737 ... Q5SHR2 26809677
    353436 5hd1:1D (2.7) BS01 rna ? GO:0002181 ... P60405 26809677
    353437 5hd1:1D (2.7) BS02 rna ? GO:0002181 ... P60405 26809677
    353438 5hd1:1D (2.7) BS03 MG ? GO:0002181 ... P60405 26809677
    353439 5hd1:1D (2.7) BS04 MG ? GO:0002181 ... P60405 26809677
    353440 5hd1:1D (2.7) BS05 MG ? GO:0002181 ... P60405 26809677
    353441 5hd1:1D (2.7) BS06 MG ? GO:0002181 ... P60405 26809677
    353442 5hd1:1D (2.7) BS07 MG ? GO:0002181 ... P60405 26809677
    353443 5hd1:1D (2.7) BS08 MG ? GO:0002181 ... P60405 26809677
    353444 5hd1:1D (2.7) BS09 MG ? GO:0002181 ... P60405 26809677
    353445 5hd1:1D (2.7) BS10 MG ? GO:0002181 ... P60405 26809677
    353446 5hd1:1D (2.7) BS11 MG ? GO:0002181 ... P60405 26809677
    353447 5hd1:1D (2.7) BS12 MG ? GO:0002181 ... P60405 26809677
    353448 5hd1:1D (2.7) BS13 MG ? GO:0002181 ... P60405 26809677
    353449 5hd1:1D (2.7) BS14 MG ? GO:0002181 ... P60405 26809677
    353450 5hd1:1D (2.7) BS15 MG ? GO:0002181 ... P60405 26809677
    353451 5hd1:1D (2.7) BS16 MG ? GO:0002181 ... P60405 26809677
    353452 5hd1:1D (2.7) BS17 MG ? GO:0002181 ... P60405 26809677
    353453 5hd1:1E (2.7) BS01 rna ? GO:0003735 ... Q5SHN8 26809677
    353454 5hd1:1E (2.7) BS02 MG ? GO:0003735 ... Q5SHN8 26809677
    353455 5hd1:1E (2.7) BS03 MG ? GO:0003735 ... Q5SHN8 26809677
    353456 5hd1:1E (2.7) BS04 MG ? GO:0003735 ... Q5SHN8 26809677
    353457 5hd1:1F (2.7) BS01 rna ? GO:0003735 ... Q5SHN9 26809677
    353458 5hd1:1F (2.7) BS02 MG ? GO:0003735 ... Q5SHN9 26809677
    353459 5hd1:1F (2.7) BS03 MG ? GO:0003735 ... Q5SHN9 26809677
    353460 5hd1:1F (2.7) BS04 MG ? GO:0003735 ... Q5SHN9 26809677
    353461 5hd1:1F (2.7) BS05 MG ? GO:0003735 ... Q5SHN9 26809677
    353462 5hd1:1F (2.7) BS06 MG ? GO:0003735 ... Q5SHN9 26809677
    353463 5hd1:1F (2.7) BS07 MG ? GO:0003735 ... Q5SHN9 26809677
    353464 5hd1:1G (2.7) BS01 rna ? GO:0000049 ... Q5SHQ0 26809677
    353465 5hd1:1G (2.7) BS02 rna ? GO:0000049 ... Q5SHQ0 26809677
    353466 5hd1:1G (2.7) BS03 rna ? GO:0000049 ... Q5SHQ0 26809677
    353467 5hd1:1G (2.7) BS04 MG ? GO:0000049 ... Q5SHQ0 26809677
    353468 5hd1:1H (2.7) BS01 rna N/A N/A N/A 26809677
    353469 5hd1:1I (2.7) BS01 rna ? GO:0005840 ... Q5SLQ1 26809677
    353470 5hd1:1N (2.7) BS01 rna ? GO:0003729 ... P60488 26809677
    353471 5hd1:1N (2.7) BS02 MG ? GO:0003729 ... P60488 26809677
    353472 5hd1:1N (2.7) BS03 MG ? GO:0003729 ... P60488 26809677
    353473 5hd1:1O (2.7) BS01 rna ? GO:0003735 ... Q5SHP8 26809677
    353474 5hd1:1O (2.7) BS02 rna ? GO:0003735 ... Q5SHP8 26809677
    353475 5hd1:1O (2.7) BS03 MG ? GO:0003735 ... Q5SHP8 26809677
    353476 5hd1:1P (2.7) BS01 rna ? GO:0003735 ... Q5SHQ7 26809677
    353477 5hd1:1P (2.7) BS02 MG ? GO:0003735 ... Q5SHQ7 26809677
    353478 5hd1:1P (2.7) BS03 MG ? GO:0003735 ... Q5SHQ7 26809677
    353479 5hd1:1P (2.7) BS04 MG ? GO:0003735 ... Q5SHQ7 26809677
    353480 5hd1:1Q (2.7) BS01 rna ? GO:0000049 ... P60489 26809677
    353481 5hd1:1Q (2.7) BS02 rna ? GO:0000049 ... P60489 26809677
    353482 5hd1:1Q (2.7) BS03 MG ? GO:0000049 ... P60489 26809677
    353483 5hd1:1Q (2.7) BS04 MG ? GO:0000049 ... P60489 26809677
    353484 5hd1:1Q (2.7) BS05 MG ? GO:0000049 ... P60489 26809677
    353485 5hd1:1R (2.7) BS01 rna ? GO:0003735 ... Q9Z9H5 26809677
    353486 5hd1:1R (2.7) BS02 MG ? GO:0003735 ... Q9Z9H5 26809677
    353487 5hd1:1R (2.7) BS03 MG ? GO:0003735 ... Q9Z9H5 26809677
    353488 5hd1:1S (2.7) BS01 rna ? GO:0005737 ... Q5SHQ4 26809677
    353489 5hd1:1S (2.7) BS02 rna ? GO:0005737 ... Q5SHQ4 26809677
    353490 5hd1:1T (2.7) BS01 rna ? GO:0003735 ... P60490 26809677
    353491 5hd1:1T (2.7) BS02 rna ? GO:0003735 ... P60490 26809677
    353492 5hd1:1U (2.7) BS01 rna ? GO:0000027 ... P60491 26809677
    353493 5hd1:1U (2.7) BS02 MG ? GO:0000027 ... P60491 26809677
    353494 5hd1:1U (2.7) BS03 MG ? GO:0000027 ... P60491 26809677
    353495 5hd1:1U (2.7) BS04 MG ? GO:0000027 ... P60491 26809677
    353496 5hd1:1U (2.7) BS05 MG ? GO:0000027 ... P60491 26809677
    353497 5hd1:1U (2.7) BS06 MG ? GO:0000027 ... P60491 26809677
    353498 5hd1:1U (2.7) BS07 MG ? GO:0000027 ... P60491 26809677
    353499 5hd1:1V (2.7) BS01 rna ? GO:0003735 ... P60492 26809677
    353500 5hd1:1V (2.7) BS02 MG ? GO:0003735 ... P60492 26809677
    353501 5hd1:1V (2.7) BS03 MG ? GO:0003735 ... P60492 26809677
    353502 5hd1:1V (2.7) BS04 MG ? GO:0003735 ... P60492 26809677
    353503 5hd1:1V (2.7) BS05 MG ? GO:0003735 ... P60492 26809677
    353504 5hd1:1W (2.7) BS01 rna ? GO:0003735 ... Q5SHP3 26809677
    353505 5hd1:1W (2.7) BS02 MG ? GO:0003735 ... Q5SHP3 26809677
    353506 5hd1:1W (2.7) BS03 MG ? GO:0003735 ... Q5SHP3 26809677
    353507 5hd1:1W (2.7) BS04 MG ? GO:0003735 ... Q5SHP3 26809677
    353508 5hd1:1X (2.7) BS01 rna ? GO:0005840 ... Q5SHP0 26809677
    353509 5hd1:1Y (2.7) BS01 rna ? GO:0005840 ... Q5SHP9 26809677
    353510 5hd1:1Y (2.7) BS02 ZN ? GO:0005840 ... Q5SHP9 26809677
    353511 5hd1:1Z (2.7) BS01 rna ? GO:0003723 ... Q5SHZ1 26809677
    353512 5hd1:1Z (2.7) BS02 rna ? GO:0003723 ... Q5SHZ1 26809677
    353513 5hd1:1b (2.7) BS01 rna ? GO:0003735 ... P80371 26809677
    353514 5hd1:1b (2.7) BS02 MG ? GO:0003735 ... P80371 26809677
    353515 5hd1:1c (2.7) BS01 rna ? GO:0003729 ... P80372 26809677
    353516 5hd1:1d (2.7) BS01 rna ? GO:0003735 ... P80373 26809677
    353517 5hd1:1d (2.7) BS02 SF4 ? GO:0003735 ... P80373 26809677
    353518 5hd1:1e (2.7) BS01 rna ? GO:0005840 ... Q5SHQ5 26809677
    353519 5hd1:1e (2.7) BS02 MG ? GO:0005840 ... Q5SHQ5 26809677
    353520 5hd1:1f (2.7) BS01 rna ? GO:0003735 ... Q5SLP8 26809677
    353521 5hd1:1g (2.7) BS01 rna ? GO:0000049 ... P17291 26809677
    353522 5hd1:1h (2.7) BS01 rna N/A N/A N/A 26809677
    353523 5hd1:1h (2.7) BS02 MG N/A N/A N/A 26809677
    353524 5hd1:1i (2.7) BS01 rna ? GO:0000049 ... P80374 26809677
    353525 5hd1:1j (2.7) BS01 rna ? GO:0000049 ... Q5SHN7 26809677
    353526 5hd1:1k (2.7) BS01 rna ? GO:0005840 ... P80376 26809677
    353527 5hd1:1k (2.7) BS02 MG ? GO:0005840 ... P80376 26809677
    353528 5hd1:1l (2.7) BS01 rna ? GO:0000049 ... Q5SHN3 26809677
    353529 5hd1:1l (2.7) BS02 MG ? GO:0000049 ... Q5SHN3 26809677
    353530 5hd1:1m (2.7) BS01 rna ? GO:0000049 ... P80377 26809677
    353531 5hd1:1m (2.7) BS02 rna ? GO:0000049 ... P80377 26809677
    353532 5hd1:1m (2.7) BS03 MG ? GO:0000049 ... P80377 26809677
    353533 5hd1:1n (2.7) BS01 rna N/A N/A N/A 26809677
    353534 5hd1:1n (2.7) BS02 ZN N/A N/A N/A 26809677
    353535 5hd1:1n (2.7) BS03 MG N/A N/A N/A 26809677
    353536 5hd1:1o (2.7) BS01 rna ? GO:0005737 ... Q5SJ76 26809677
    353537 5hd1:1o (2.7) BS02 rna ? GO:0005737 ... Q5SJ76 26809677
    353538 5hd1:1p (2.7) BS01 rna ? GO:0003735 ... Q5SJH3 26809677
    353539 5hd1:1q (2.7) BS01 rna N/A N/A N/A 26809677
    353540 5hd1:1r (2.7) BS01 rna ? GO:0003735 ... Q5SLQ0 26809677
    353541 5hd1:1s (2.7) BS01 rna ? GO:0000028 ... Q5SHP2 26809677
    353542 5hd1:1s (2.7) BS02 MG ? GO:0000028 ... Q5SHP2 26809677
    353543 5hd1:1t (2.7) BS01 rna ? GO:0005840 ... P80380 26809677
    353544 5hd1:20 (2.7) BS01 rna ? GO:0003735 ... P60493 26809677
    353545 5hd1:20 (2.7) BS02 rna ? GO:0003735 ... P60493 26809677
    353546 5hd1:21 (2.7) BS01 rna ? GO:0005840 ... P60494 26809677
    353547 5hd1:22 (2.7) BS01 rna ? GO:0005840 ... Q5SHP6 26809677
    353548 5hd1:23 (2.7) BS01 rna ? GO:0005840 ... Q5SHQ6 26809677
    353549 5hd1:23 (2.7) BS02 rna ? GO:0005840 ... Q5SHQ6 26809677
    353550 5hd1:23 (2.7) BS03 MG ? GO:0005840 ... Q5SHQ6 26809677
    353551 5hd1:24 (2.7) BS01 rna ? GO:0005840 ... Q5SJE1 26809677
    353552 5hd1:24 (2.7) BS02 ZN ? GO:0005840 ... Q5SJE1 26809677
    353553 5hd1:25 (2.7) BS01 rna ? GO:0005840 ... P80339 26809677
    353554 5hd1:25 (2.7) BS02 ZN ? GO:0005840 ... P80339 26809677
    353555 5hd1:26 (2.7) BS01 rna ? GO:0000049 ... P35871 26809677
    353556 5hd1:26 (2.7) BS02 ZN ? GO:0000049 ... P35871 26809677
    353557 5hd1:27 (2.7) BS01 rna ? GO:0005840 ... P80340 26809677
    353558 5hd1:28 (2.7) BS01 rna ? GO:0003735 ... Q5SKU1 26809677
    353559 5hd1:29 (2.7) BS01 rna ? GO:0005737 ... Q5SHR2 26809677
    353560 5hd1:29 (2.7) BS02 ZN ? GO:0005737 ... Q5SHR2 26809677
    353561 5hd1:2D (2.7) BS01 rna ? GO:0002181 ... P60405 26809677
    353562 5hd1:2D (2.7) BS02 rna ? GO:0002181 ... P60405 26809677
    353563 5hd1:2D (2.7) BS03 MG ? GO:0002181 ... P60405 26809677
    353564 5hd1:2D (2.7) BS04 MG ? GO:0002181 ... P60405 26809677
    353565 5hd1:2D (2.7) BS05 MG ? GO:0002181 ... P60405 26809677
    353566 5hd1:2D (2.7) BS06 MG ? GO:0002181 ... P60405 26809677
    353567 5hd1:2E (2.7) BS01 rna ? GO:0003735 ... Q5SHN8 26809677
    353568 5hd1:2E (2.7) BS02 MG ? GO:0003735 ... Q5SHN8 26809677
    353569 5hd1:2E (2.7) BS03 MG ? GO:0003735 ... Q5SHN8 26809677
    353570 5hd1:2F (2.7) BS01 rna ? GO:0003735 ... Q5SHN9 26809677
    353571 5hd1:2F (2.7) BS02 MG ? GO:0003735 ... Q5SHN9 26809677
    353572 5hd1:2F (2.7) BS03 MG ? GO:0003735 ... Q5SHN9 26809677
    353573 5hd1:2F (2.7) BS04 MG ? GO:0003735 ... Q5SHN9 26809677
    353574 5hd1:2G (2.7) BS01 rna ? GO:0000049 ... Q5SHQ0 26809677
    353575 5hd1:2G (2.7) BS02 rna ? GO:0000049 ... Q5SHQ0 26809677
    353576 5hd1:2G (2.7) BS03 rna ? GO:0000049 ... Q5SHQ0 26809677
    353577 5hd1:2H (2.7) BS01 rna N/A N/A N/A 26809677
    353578 5hd1:2I (2.7) BS01 rna ? GO:0005840 ... Q5SLQ1 26809677
    353579 5hd1:2N (2.7) BS01 rna ? GO:0003729 ... P60488 26809677
    353580 5hd1:2O (2.7) BS01 rna ? GO:0003735 ... Q5SHP8 26809677
    353581 5hd1:2O (2.7) BS02 rna ? GO:0003735 ... Q5SHP8 26809677
    353582 5hd1:2O (2.7) BS03 MG ? GO:0003735 ... Q5SHP8 26809677
    353583 5hd1:2P (2.7) BS01 rna ? GO:0003735 ... Q5SHQ7 26809677
    353584 5hd1:2Q (2.7) BS01 rna ? GO:0000049 ... P60489 26809677
    353585 5hd1:2Q (2.7) BS02 rna ? GO:0000049 ... P60489 26809677
    353586 5hd1:2Q (2.7) BS03 MG ? GO:0000049 ... P60489 26809677
    353587 5hd1:2Q (2.7) BS04 MG ? GO:0000049 ... P60489 26809677
    353588 5hd1:2R (2.7) BS01 rna ? GO:0003735 ... Q9Z9H5 26809677
    353589 5hd1:2S (2.7) BS01 rna ? GO:0005737 ... Q5SHQ4 26809677
    353590 5hd1:2S (2.7) BS02 rna ? GO:0005737 ... Q5SHQ4 26809677
    353591 5hd1:2T (2.7) BS01 rna ? GO:0003735 ... P60490 26809677
    353592 5hd1:2T (2.7) BS02 rna ? GO:0003735 ... P60490 26809677
    353593 5hd1:2U (2.7) BS01 rna ? GO:0000027 ... P60491 26809677
    353594 5hd1:2U (2.7) BS02 MG ? GO:0000027 ... P60491 26809677
    353595 5hd1:2V (2.7) BS01 rna ? GO:0003735 ... P60492 26809677
    353596 5hd1:2V (2.7) BS02 MG ? GO:0003735 ... P60492 26809677
    353597 5hd1:2V (2.7) BS03 MG ? GO:0003735 ... P60492 26809677
    353598 5hd1:2W (2.7) BS01 rna ? GO:0003735 ... Q5SHP3 26809677
    353599 5hd1:2W (2.7) BS02 MG ? GO:0003735 ... Q5SHP3 26809677
    353600 5hd1:2X (2.7) BS01 rna ? GO:0005840 ... Q5SHP0 26809677

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).