SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    353801 5hg0:B (2.4) BS01 SAM 6.3.2.1 GO:0003824 ... Q5NF57 N/A
    353802 5hg1:A (2.76) BS01 62C 2.7.1.1 GO:0001666 ... P52789 26985301
    353803 5hg1:A (2.76) BS02 62C 2.7.1.1 GO:0001666 ... P52789 26985301
    353804 5hg1:A (2.76) BS03 BG6 2.7.1.1 GO:0001666 ... P52789 26985301
    353805 5hg5:A (1.52) BS01 633 2.7.10.1 GO:0004672 ... P00533 26756222
    353806 5hg7:A (1.85) BS01 630 2.7.10.1 GO:0004672 ... P00533 26756222
    353807 5hg8:A (1.42) BS01 634 2.7.10.1 GO:0004672 ... P00533 26756222
    353808 5hg9:A (2.15) BS01 63A 2.7.10.1 GO:0004672 ... P00533 26756222
    353809 5hga:A (2.199) BS01 peptide ? N/A P04439 27239036
    353810 5hga:D (2.199) BS01 peptide ? N/A P04439 27239036
    353811 5hgb:A (2.4) BS01 peptide ? N/A P04439 27239036
    353812 5hgb:D (2.4) BS01 peptide ? N/A P04439 27239036
    353813 5hgb:G (2.4) BS01 peptide ? N/A P04439 27239036
    353814 5hgb:J (2.4) BS01 peptide ? N/A P04439 27239036
    353815 5hgc:A (2.43) BS01 HCY ? GO:0004867 ... H0ZQY2 N/A
    353816 5hgc:A (2.43) BS02 BDG ? GO:0004867 ... H0ZQY2 N/A
    353817 5hgd:A (2.07) BS01 peptide ? N/A P04439 27239036
    353818 5hgd:D (2.07) BS01 peptide ? N/A P04439 27239036
    353819 5hgg:S (1.97) BS01 TWN N/A N/A N/A 27226628
    353820 5hgg:S (1.97) BS02 TWN N/A N/A N/A 27226628
    353821 5hgg:T (1.97) BS01 TWN N/A N/A N/A 27226628
    353822 5hgg:T (1.97) BS02 TWN N/A N/A N/A 27226628
    353823 5hgh:A (2.392) BS01 peptide ? N/A P04439 27239036
    353824 5hgj:A (1.399) BS01 CA ? N/A P56199 29440721
    353825 5hgj:B (1.399) BS01 CA ? N/A P56199 29440721
    353826 5hgl:A (3.1) BS01 1B0 ? GO:0016032 ... P12493 27509857
    353827 5hgl:A (3.1) BS02 1B0 ? GO:0016032 ... P12493 27509857
    353828 5hgl:B (3.1) BS01 1B0 ? GO:0016032 ... P12493 27509857
    353829 5hgl:C (3.1) BS01 1B0 ? GO:0016032 ... P12493 27509857
    353830 5hgl:D (3.1) BS01 1B0 ? GO:0016032 ... P12493 27509857
    353831 5hgl:E (3.1) BS01 1B0 ? GO:0016032 ... P12493 27509857
    353832 5hgl:F (3.1) BS01 1B0 ? GO:0016032 ... P12493 27509857
    353833 5hgq:A (3.283) BS01 LYS N/A GO:0000166 ... N/A 27806050
    353834 5hgq:A (3.283) BS02 KRS N/A GO:0000166 ... N/A 27806050
    353835 5hgq:B (3.283) BS01 LYS N/A GO:0000166 ... N/A 27806050
    353836 5hgq:B (3.283) BS02 KRS N/A GO:0000166 ... N/A 27806050
    353837 5hgq:C (3.283) BS01 LYS N/A GO:0000166 ... N/A 27806050
    353838 5hgq:C (3.283) BS02 KRS N/A GO:0000166 ... N/A 27806050
    353839 5hgq:D (3.283) BS01 LYS N/A GO:0000166 ... N/A 27806050
    353840 5hgq:D (3.283) BS02 KRS N/A GO:0000166 ... N/A 27806050
    353841 5hgr:A (1.681) BS01 45D ? GO:0009579 ... Q8YSD9 27208286
    353842 5hgr:B (1.681) BS01 45D ? GO:0009579 ... Q8YSD9 27208286
    353843 5hgt:A (1.75) BS01 CA 3.1.31.1 N/A P00644 N/A
    353844 5hgt:A (1.75) BS02 THP 3.1.31.1 N/A P00644 N/A
    353845 5hgv:A (2.05) BS01 peptide 2.4.1.255 GO:0006493 ... O15294 27618188
    353846 5hgv:A (2.05) BS02 UDP 2.4.1.255 GO:0006493 ... O15294 27618188 BindingDB: IC50=1800nM
    353847 5hgv:C (2.05) BS01 peptide 2.4.1.255 GO:0006493 ... O15294 27618188
    353848 5hgv:C (2.05) BS02 UDP 2.4.1.255 GO:0006493 ... O15294 27618188 BindingDB: IC50=1800nM
    353849 5hgw:A (1.6) BS01 FE 3.5.1.88 GO:0006412 ... B1YSH1 N/A
    353850 5hgw:B (1.6) BS01 FE 3.5.1.88 GO:0006412 ... B1YSH1 N/A
    353851 5hgz:A (1.383) BS01 ACO 2.3.1.259
    2.3.1.48
    GO:0000139 ... Q9H7X0 27550639
    353852 5hh0:A (1.6) BS01 COA 2.3.1.259
    2.3.1.48
    GO:0004596 ... Q9H7X0 27550639
    353853 5hh1:A (1.803) BS01 COA 2.3.1.259
    2.3.1.48
    GO:0004596 ... Q9H7X0 27550639
    353854 5hh3:A (2.1) BS01 HEM ? GO:0004497 ... Q6ZZI8 26820384
    353855 5hh3:C (2.1) BS01 HEM ? GO:0004497 ... Q6ZZI8 26820384
    353856 5hh4:A (2.0) BS01 ZN 3.5.2.6 GO:0008270 ... P52699 29485857
    353857 5hh4:A (2.0) BS02 ZN 3.5.2.6 GO:0008270 ... P52699 29485857
    353858 5hh4:A (2.0) BS03 60M 3.5.2.6 GO:0008270 ... P52699 29485857
    353859 5hh4:B (2.0) BS01 ZN 3.5.2.6 GO:0008270 ... P52699 29485857
    353860 5hh4:B (2.0) BS02 ZN 3.5.2.6 GO:0008270 ... P52699 29485857
    353861 5hh4:B (2.0) BS03 60M 3.5.2.6 GO:0008270 ... P52699 29485857
    353862 5hh4:C (2.0) BS01 ZN 3.5.2.6 GO:0008270 ... P52699 29485857
    353863 5hh4:C (2.0) BS02 ZN 3.5.2.6 GO:0008270 ... P52699 29485857
    353864 5hh4:D (2.0) BS01 ZN 3.5.2.6 GO:0008270 ... P52699 29485857
    353865 5hh4:D (2.0) BS02 ZN 3.5.2.6 GO:0008270 ... P52699 29485857
    353866 5hh5:A (1.8) BS01 ZN 3.5.2.6 GO:0008270 ... P52700 29485857
    353867 5hh5:A (1.8) BS02 60M 3.5.2.6 GO:0008270 ... P52700 29485857
    353868 5hh6:A (1.8) BS01 ZN 3.5.2.6 GO:0008270 ... P52700 29485857
    353869 5hh6:A (1.8) BS02 60N 3.5.2.6 GO:0008270 ... P52700 29485857
    353870 5hh7:A (1.901) BS01 peptide ? GO:0003682 ... Q9SU24 26876097
    353871 5hh7:A (1.901) BS02 ZN ? GO:0003682 ... Q9SU24 26876097
    353872 5hh7:A (1.901) BS03 ZN ? GO:0003682 ... Q9SU24 26876097
    353873 5hh9:A (1.47) BS01 PLP 2.8.1.7 GO:0002049 ... G3XCY5 N/A
    353874 5hh9:A (1.47) BS02 PLP 2.8.1.7 GO:0002049 ... G3XCY5 N/A
    353875 5hh9:B (1.47) BS01 PLP 2.8.1.7 GO:0002049 ... G3XCY5 N/A
    353876 5hha:A (1.24) BS01 CA ? GO:0002049 ... Q9I185 N/A
    353877 5hha:B (1.24) BS01 CA ? GO:0002049 ... Q9I185 N/A
    353878 5hhf:A (2.3) BS01 MRY 5.4.99.9 GO:0000166 ... Q4W1X2 26836146
    353879 5hhf:A (2.3) BS02 62F 5.4.99.9 GO:0000166 ... Q4W1X2 26836146
    353880 5hhf:A (2.3) BS03 UDP 5.4.99.9 GO:0000166 ... Q4W1X2 26836146
    353881 5hhf:B (2.3) BS01 MRY 5.4.99.9 GO:0000166 ... Q4W1X2 26836146
    353882 5hhf:B (2.3) BS02 62F 5.4.99.9 GO:0000166 ... Q4W1X2 26836146
    353883 5hhf:B (2.3) BS03 UDP 5.4.99.9 GO:0000166 ... Q4W1X2 26836146
    353884 5hhf:C (2.3) BS01 MRY 5.4.99.9 GO:0000166 ... Q4W1X2 26836146
    353885 5hhf:C (2.3) BS02 FDA 5.4.99.9 GO:0000166 ... Q4W1X2 26836146
    353886 5hhf:D (2.3) BS01 MRY 5.4.99.9 GO:0000166 ... Q4W1X2 26836146
    353887 5hhf:D (2.3) BS02 FDA 5.4.99.9 GO:0000166 ... Q4W1X2 26836146
    353888 5hhg:E (2.2) BS01 peptide ? N/A P52293 27622521
    353889 5hhh:A (2.363) BS01 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0001701 ... P06746 28649747
    353890 5hhh:A (2.363) BS02 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0001701 ... P06746 28649747
    353891 5hhh:A (2.363) BS03 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0001701 ... P06746 28649747
    353892 5hhi:A (2.517) BS01 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0001701 ... P06746 28649747
    353893 5hhi:A (2.517) BS02 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0001701 ... P06746 28649747
    353894 5hhi:A (2.517) BS03 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0001701 ... P06746 28649747
    353895 5hhk:B (1.4) BS01 GLY ? GO:0003723 ... D4L313 27136328
    353896 5hhm:A (2.5) BS01 peptide ? N/A P04439 27036003
    353897 5hhm:D (2.5) BS01 peptide ? GO:0002250 ... A0A087WT01
    P01848
    27036003
    353898 5hhm:E (2.5) BS01 peptide ? N/A A0A075B6N1
    A0A5B9
    27036003
    353899 5hhm:F (2.5) BS01 peptide ? N/A P04439 27036003
    353900 5hhm:I (2.5) BS01 peptide ? GO:0002250 ... A0A087WT01
    P01848
    27036003
    353901 5hhm:J (2.5) BS01 peptide ? N/A A0A075B6N1
    A0A5B9
    27036003
    353902 5hhn:A (2.03) BS01 peptide ? N/A P04439 27036003
    353903 5hho:A (2.95) BS01 peptide ? N/A P04439 27036003
    353904 5hho:D (2.95) BS01 peptide ? GO:0002250 ... A0A087WT01
    P01848
    27036003
    353905 5hho:E (2.95) BS01 peptide ? N/A A0A075B6N1
    A0A5B9
    27036003
    353906 5hhp:A (1.9) BS01 peptide ? N/A P04439 27036003
    353907 5hhq:A (2.1) BS01 peptide ? N/A P04439 27036003
    353908 5hht:A (1.5) BS01 CA 2.2.1.1 GO:0000287 ... P27302 27767080
    353909 5hht:A (1.5) BS02 TPP 2.2.1.1 GO:0000287 ... P27302 27767080
    353910 5hht:A (1.5) BS03 TPP 2.2.1.1 GO:0000287 ... P27302 27767080
    353911 5hht:B (1.5) BS01 TPP 2.2.1.1 GO:0000287 ... P27302 27767080
    353912 5hht:B (1.5) BS02 TPP 2.2.1.1 GO:0000287 ... P27302 27767080
    353913 5hht:B (1.5) BS03 CA 2.2.1.1 GO:0000287 ... P27302 27767080
    353914 5hhv:A (2.2) BS01 peptide ? GO:0002225 ... Q16552 27184415
    353915 5hhw:A (1.79) BS01 60O 2.7.10.1 GO:0004672 ... P06213 26951750
    353916 5hhx:A (3.0) BS01 peptide ? GO:0005125 ... Q16552 27184415
    353917 5hhy:A (1.7) BS01 PLR 2.6.1.44
    2.6.1.51
    GO:0004760 ... P21549 28916765
    353918 5hhy:A (1.7) BS02 PLR 2.6.1.44
    2.6.1.51
    GO:0004760 ... P21549 28916765
    353919 5hhy:B (1.7) BS01 PLR 2.6.1.44
    2.6.1.51
    GO:0004760 ... P21549 28916765
    353920 5hhy:B (1.7) BS02 PLR 2.6.1.44
    2.6.1.51
    GO:0004760 ... P21549 28916765
    353921 5hhz:A (2.0) BS01 FAD 1.5.99.12 GO:0000166 ... E3T1W8 27095406
    353922 5hhz:A (2.0) BS02 ZME 1.5.99.12 GO:0000166 ... E3T1W8 27095406
    353923 5hi0:A (2.602) BS01 CO 4.1.1.2 GO:0005737 ... O34714 27014926
    353924 5hi0:A (2.602) BS02 CO 4.1.1.2 GO:0005737 ... O34714 27014926
    353925 5hi0:A (2.602) BS03 OXL 4.1.1.2 GO:0005737 ... O34714 27014926
    353926 5hi2:A (2.512) BS01 BAX 2.7.11.1 GO:0004672 ... P15056 26996308 BindingDB: IC50=22nM, Kd=260nM, Ki=22nM
    353927 5hi3:A (2.15) BS01 peptide ? GO:0002225 ... Q16552 27527709
    353928 5hi3:A (2.15) BS02 63O ? GO:0002225 ... Q16552 27527709
    353929 5hi3:B (2.15) BS01 peptide ? GO:0002225 ... Q16552 27527709
    353930 5hi3:B (2.15) BS02 63O ? GO:0002225 ... Q16552 27527709 MOAD: ic50=1.14uM
    353931 5hi4:A (1.8) BS01 peptide ? GO:0002225 ... Q16552 27527709
    353932 5hi4:A (1.8) BS02 63P ? GO:0002225 ... Q16552 27527709 MOAD: ic50=0.034uM
    353933 5hi4:B (1.8) BS01 peptide ? GO:0002225 ... Q16552 27527709
    353934 5hi4:B (1.8) BS02 63P ? GO:0002225 ... Q16552 27527709
    353935 5hi5:A (1.8) BS01 peptide ? GO:0002225 ... Q16552 27527709
    353936 5hi5:A (1.8) BS02 63Q ? GO:0002225 ... Q16552 27527709
    353937 5hi5:B (1.8) BS01 peptide ? GO:0002225 ... Q16552 27527709
    353938 5hi5:B (1.8) BS02 63Q ? GO:0002225 ... Q16552 27527709 MOAD: ic50=0.009uM
    353939 5hi6:A (2.051) BS01 MTX 1.5.1.3 GO:0004146 ... A0A3N4BLI0 N/A
    353940 5hi6:A (2.051) BS02 CA 1.5.1.3 GO:0004146 ... A0A3N4BLI0 N/A
    353941 5hi6:B (2.051) BS01 MTX 1.5.1.3 GO:0004146 ... A0A3N4BLI0 N/A
    353942 5hi7:A (2.15) BS01 ZN 2.1.1.354 GO:0000978 ... Q9H7B4 27066749
    353943 5hi7:A (2.15) BS02 ZN 2.1.1.354 GO:0000978 ... Q9H7B4 27066749
    353944 5hi7:A (2.15) BS03 ZN 2.1.1.354 GO:0000978 ... Q9H7B4 27066749
    353945 5hi7:A (2.15) BS04 MG 2.1.1.354 GO:0000978 ... Q9H7B4 27066749
    353946 5hi7:A (2.15) BS05 62X 2.1.1.354 GO:0000978 ... Q9H7B4 27066749 MOAD: Ki=14nM
    353947 5hia:A (1.773) BS01 YPG 2.4.2.8 GO:0000166 ... P00492 29161011 BindingDB: Ki=3.0nM
    353948 5hia:A (1.773) BS02 MG 2.4.2.8 GO:0000166 ... P00492 29161011
    353949 5hia:B (1.773) BS01 YPG 2.4.2.8 GO:0000166 ... P00492 29161011 BindingDB: Ki=3.0nM
    353950 5hia:B (1.773) BS02 MG 2.4.2.8 GO:0000166 ... P00492 29161011
    353951 5hia:C (1.773) BS01 YPG 2.4.2.8 GO:0000166 ... P00492 29161011 BindingDB: Ki=3.0nM
    353952 5hia:C (1.773) BS02 MG 2.4.2.8 GO:0000166 ... P00492 29161011
    353953 5hia:D (1.773) BS01 YPG 2.4.2.8 GO:0000166 ... P00492 29161011 BindingDB: Ki=3.0nM
    353954 5hia:D (1.773) BS02 MG 2.4.2.8 GO:0000166 ... P00492 29161011
    353955 5hib:A (2.85) BS01 63M 2.7.10.1 GO:0004672 ... P00533 26996308
    353956 5hic:A (2.6) BS01 63N 2.7.10.1 GO:0004672 ... P00533 26996308
    353957 5hid:A (2.5) BS01 B1E 2.7.11.1 GO:0004672 ... P15056 26996308 BindingDB: IC50=2640nM
    353958 5hid:B (2.5) BS01 B1E 2.7.11.1 GO:0004672 ... P15056 26996308 BindingDB: IC50=2640nM
    353959 5hie:A (3.0) BS01 P06 2.7.11.1 GO:0004672 ... P15056 26996308 BindingDB: IC50=1.000000nM, EC50=529nM
    353960 5hie:B (3.0) BS01 P06 2.7.11.1 GO:0004672 ... P15056 26996308 BindingDB: IC50=1.000000nM, EC50=529nM
    353961 5hie:C (3.0) BS01 P06 2.7.11.1 GO:0004672 ... P15056 26996308 BindingDB: IC50=1.000000nM, EC50=529nM
    353962 5hie:D (3.0) BS01 P06 2.7.11.1 GO:0004672 ... P15056 26996308 BindingDB: IC50=1.000000nM, EC50=529nM
    353963 5hif:A (1.6) BS01 ZN N/A N/A N/A N/A
    353964 5hif:A (1.6) BS02 ZN N/A N/A N/A N/A
    353965 5hif:B (1.6) BS01 ZN N/A N/A N/A N/A
    353966 5hif:B (1.6) BS02 ZN N/A N/A N/A N/A
    353967 5hif:B (1.6) BS03 MG N/A N/A N/A N/A
    353968 5hik:A (2.354) BS01 SAM 2.1.1.156 GO:0005829 ... F6KV61 27934872
    353969 5hil:A (2.471) BS01 SAH 2.1.1.156 GO:0005829 ... F6KV61 27934872
    353970 5hil:A (2.471) BS02 SAR 2.1.1.156 GO:0005829 ... F6KV61 27934872
    353971 5him:A (2.338) BS01 SAH 2.1.1.156 GO:0005829 ... F6KV61 27934872
    353972 5him:A (2.338) BS02 DMG 2.1.1.156 GO:0005829 ... F6KV61 27934872
    353973 5hin:A (1.6) BS01 FMN 1.3.5.2 GO:0004151 ... Q02127 N/A
    353974 5hin:A (1.6) BS02 1KL 1.3.5.2 GO:0004151 ... Q02127 N/A
    353975 5hio:A (1.9) BS01 FE 3.1.2.32 GO:0016787 ... P20581 27082157
    353976 5hio:A (1.9) BS02 FE 3.1.2.32 GO:0016787 ... P20581 27082157
    353977 5hio:A (1.9) BS03 61M 3.1.2.32 GO:0016787 ... P20581 27082157
    353978 5hip:A (1.992) BS01 FE 3.1.2.32 GO:0016787 ... P20581 27082157
    353979 5hip:A (1.992) BS02 FE 3.1.2.32 GO:0016787 ... P20581 27082157
    353980 5hip:A (1.992) BS03 61O 3.1.2.32 GO:0016787 ... P20581 27082157 MOAD: Kd=0.9uM
    353981 5hiq:A (2.1) BS01 FE 3.1.2.32 GO:0016787 ... P20581 27082157
    353982 5hiq:A (2.1) BS02 FE 3.1.2.32 GO:0016787 ... P20581 27082157
    353983 5hiq:A (2.1) BS03 60Q 3.1.2.32 GO:0016787 ... P20581 27082157
    353984 5his:A (1.77) BS01 FE 3.1.2.32 GO:0016787 ... P20581 27082157
    353985 5his:A (1.77) BS02 FE 3.1.2.32 GO:0016787 ... P20581 27082157
    353986 5his:A (1.77) BS03 60P 3.1.2.32 GO:0016787 ... P20581 27082157 MOAD: Kd=19.6uM
    353987 5hit:A (2.85) BS01 peptide ? GO:0005509 ... P62149 27618660
    353988 5hit:A (2.85) BS02 CA ? GO:0005509 ... P62149 27618660
    353989 5hit:A (2.85) BS03 CA ? GO:0005509 ... P62149 27618660
    353990 5hiw:A (1.85) BS01 HEM 1.14.-.- GO:0004497 ... A9FFA1 27177597
    353991 5hj0:A (2.64) BS01 ZN ? N/A Q9P802 26921242
    353992 5hj0:B (2.64) BS01 ZN ? N/A Q9P802 26921242
    353993 5hj0:C (2.64) BS01 ZN ? N/A Q9P802 26921242
    353994 5hj1:A (1.5) BS01 VCA N/A GO:0015627 ... N/A N/A
    353995 5hj2:A (2.153) BS01 CA ? N/A P17301 29440721
    353996 5hj2:B (2.153) BS01 CA ? N/A P17301 29440721
    353997 5hj2:C (2.153) BS01 CA ? N/A P17301 29440721
    353998 5hj2:D (2.153) BS01 CA ? N/A P17301 29440721
    353999 5hj2:E (2.153) BS01 CA ? N/A P17301 29440721
    354000 5hj3:B (3.3) BS01 MAN N/A N/A N/A 26908579

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).