SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    356801 5ib7:1E (2.99) BS01 rna ? GO:0003735 ... P80371 27174928
    356802 5ib7:1I (2.99) BS01 rna ? GO:0000049 ... Q5SHN7 27174928
    356803 5ib7:21 (2.99) BS01 rna ? GO:0003735 ... Q5SHN8 27174928
    356804 5ib7:21 (2.99) BS02 MG ? GO:0003735 ... Q5SHN8 27174928
    356805 5ib7:22 (2.99) BS01 rna ? GO:0003676 ... P80372 27174928
    356806 5ib7:22 (2.99) BS02 rna ? GO:0003676 ... P80372 27174928
    356807 5ib7:25 (2.99) BS01 rna ? GO:0003735 ... Q5SHP8 27174928
    356808 5ib7:25 (2.99) BS02 rna ? GO:0003735 ... Q5SHP8 27174928
    356809 5ib7:29 (2.99) BS01 rna ? GO:0003735 ... Q5SHN8 27174928
    356810 5ib7:2A (2.99) BS01 rna ? GO:0003735 ... P80376 27174928
    356811 5ib7:2A (2.99) BS02 MG ? GO:0003735 ... P80376 27174928
    356812 5ib7:2E (2.99) BS01 rna ? GO:0003676 ... P80372 27174928
    356813 5ib7:2I (2.99) BS01 rna ? GO:0003735 ... P80376 27174928
    356814 5ib7:31 (2.99) BS01 rna ? GO:0003735 ... Q5SHN9 27174928
    356815 5ib7:31 (2.99) BS02 MG ? GO:0003735 ... Q5SHN9 27174928
    356816 5ib7:32 (2.99) BS01 rna ? GO:0003723 ... P80373 27174928
    356817 5ib7:32 (2.99) BS02 SF4 ? GO:0003723 ... P80373 27174928
    356818 5ib7:35 (2.99) BS01 rna ? GO:0003735 ... Q5SHQ7 27174928
    356819 5ib7:39 (2.99) BS01 rna ? GO:0003735 ... Q5SHN9 27174928
    356820 5ib7:39 (2.99) BS02 MG ? GO:0003735 ... Q5SHN9 27174928
    356821 5ib7:39 (2.99) BS03 MG ? GO:0003735 ... Q5SHN9 27174928
    356822 5ib7:3A (2.99) BS01 rna ? GO:0000049 ... Q5SHN3 27174928
    356823 5ib7:3E (2.99) BS01 rna ? GO:0003723 ... P80373 27174928
    356824 5ib7:3E (2.99) BS02 SF4 ? GO:0003723 ... P80373 27174928
    356825 5ib7:3I (2.99) BS01 rna ? GO:0000049 ... Q5SHN3 27174928
    356826 5ib7:3I (2.99) BS02 MG ? GO:0000049 ... Q5SHN3 27174928
    356827 5ib7:41 (2.99) BS01 rna ? GO:0000049 ... Q5SHQ0 27174928
    356828 5ib7:41 (2.99) BS02 rna ? GO:0000049 ... Q5SHQ0 27174928
    356829 5ib7:41 (2.99) BS03 MG ? GO:0000049 ... Q5SHQ0 27174928
    356830 5ib7:42 (2.99) BS01 rna ? GO:0003723 ... Q5SHQ5 27174928
    356831 5ib7:42 (2.99) BS02 rna ? GO:0003723 ... Q5SHQ5 27174928
    356832 5ib7:42 (2.99) BS03 MG ? GO:0003723 ... Q5SHQ5 27174928
    356833 5ib7:45 (2.99) BS01 rna ? GO:0000049 ... P60489 27174928
    356834 5ib7:45 (2.99) BS02 rna ? GO:0000049 ... P60489 27174928
    356835 5ib7:45 (2.99) BS03 rna ? GO:0000049 ... P60489 27174928
    356836 5ib7:45 (2.99) BS04 MG ? GO:0000049 ... P60489 27174928
    356837 5ib7:49 (2.99) BS01 rna ? GO:0000049 ... Q5SHQ0 27174928
    356838 5ib7:49 (2.99) BS02 rna ? GO:0000049 ... Q5SHQ0 27174928
    356839 5ib7:49 (2.99) BS03 rna ? GO:0000049 ... Q5SHQ0 27174928
    356840 5ib7:4A (2.99) BS01 rna ? GO:0000049 ... P80377 27174928
    356841 5ib7:4E (2.99) BS01 rna ? GO:0003723 ... Q5SHQ5 27174928
    356842 5ib7:4E (2.99) BS02 rna ? GO:0003723 ... Q5SHQ5 27174928
    356843 5ib7:4I (2.99) BS01 rna ? GO:0000049 ... P80377 27174928
    356844 5ib7:51 (2.99) BS01 rna N/A GO:0003735 ... N/A 27174928
    356845 5ib7:52 (2.99) BS01 rna ? GO:0003735 ... Q5SLP8 27174928
    356846 5ib7:55 (2.99) BS01 rna ? GO:0003735 ... Q9Z9H5 27174928
    356847 5ib7:58 (2.99) BS01 rna ? GO:0003729 ... P60488 27174928
    356848 5ib7:59 (2.99) BS01 rna N/A GO:0003735 ... N/A 27174928
    356849 5ib7:5A (2.99) BS01 rna N/A GO:0003735 ... N/A 27174928
    356850 5ib7:5E (2.99) BS01 rna ? GO:0003735 ... Q5SLP8 27174928
    356851 5ib7:5I (2.99) BS01 rna N/A GO:0003735 ... N/A 27174928
    356852 5ib7:5I (2.99) BS02 MG N/A GO:0003735 ... N/A 27174928
    356853 5ib7:5I (2.99) BS03 ZN N/A GO:0003735 ... N/A 27174928
    356854 5ib7:61 (2.99) BS01 rna ? GO:0003735 ... Q5SLQ1 27174928
    356855 5ib7:62 (2.99) BS01 rna ? GO:0000049 ... P17291 27174928
    356856 5ib7:65 (2.99) BS01 rna ? GO:0003735 ... Q5SHQ4 27174928
    356857 5ib7:65 (2.99) BS02 rna ? GO:0003735 ... Q5SHQ4 27174928
    356858 5ib7:68 (2.99) BS01 rna ? GO:0003735 ... Q5SHP8 27174928
    356859 5ib7:68 (2.99) BS02 rna ? GO:0003735 ... Q5SHP8 27174928
    356860 5ib7:69 (2.99) BS01 rna ? GO:0003735 ... Q5SLQ1 27174928
    356861 5ib7:69 (2.99) BS02 rna ? GO:0003735 ... Q5SLQ1 27174928
    356862 5ib7:6A (2.99) BS01 rna ? GO:0003735 ... Q5SJ76 27174928
    356863 5ib7:6A (2.99) BS02 rna ? GO:0003735 ... Q5SJ76 27174928
    356864 5ib7:6E (2.99) BS01 rna ? GO:0000049 ... P17291 27174928
    356865 5ib7:6E (2.99) BS02 rna ? GO:0000049 ... P17291 27174928
    356866 5ib7:6I (2.99) BS01 rna ? GO:0003735 ... Q5SJ76 27174928
    356867 5ib7:6I (2.99) BS02 rna ? GO:0003735 ... Q5SJ76 27174928
    356868 5ib7:71 (2.99) BS01 rna ? GO:0000049 ... P27150 27174928
    356869 5ib7:72 (2.99) BS01 rna N/A GO:0003735 ... N/A 27174928
    356870 5ib7:75 (2.99) BS01 rna ? GO:0003735 ... P60490 27174928
    356871 5ib7:75 (2.99) BS02 rna ? GO:0003735 ... P60490 27174928
    356872 5ib7:78 (2.99) BS01 rna ? GO:0003735 ... Q5SHQ7 27174928
    356873 5ib7:7A (2.99) BS01 rna ? GO:0003735 ... Q5SJH3 27174928
    356874 5ib7:7E (2.99) BS01 rna N/A GO:0003735 ... N/A 27174928
    356875 5ib7:7I (2.99) BS01 rna ? GO:0003735 ... Q5SJH3 27174928
    356876 5ib7:82 (2.99) BS01 rna ? GO:0000049 ... P80374 27174928
    356877 5ib7:85 (2.99) BS01 rna ? GO:0000027 ... P60491 27174928
    356878 5ib7:88 (2.99) BS01 rna ? GO:0000049 ... P60489 27174928
    356879 5ib7:88 (2.99) BS02 rna ? GO:0000049 ... P60489 27174928
    356880 5ib7:88 (2.99) BS03 rna ? GO:0000049 ... P60489 27174928
    356881 5ib7:8A (2.99) BS01 rna N/A GO:0003735 ... N/A 27174928
    356882 5ib7:8E (2.99) BS01 rna ? GO:0000049 ... P80374 27174928
    356883 5ib7:8E (2.99) BS02 rna ? GO:0000049 ... P80374 27174928
    356884 5ib7:8I (2.99) BS01 rna N/A GO:0003735 ... N/A 27174928
    356885 5ib7:95 (2.99) BS01 rna ? GO:0003723 ... P60492 27174928
    356886 5ib7:98 (2.99) BS01 rna ? GO:0003735 ... Q9Z9H5 27174928
    356887 5ib7:9A (2.99) BS01 rna ? GO:0003735 ... Q5SLQ0 27174928
    356888 5ib7:9I (2.99) BS01 rna ? GO:0003735 ... Q5SLQ0 27174928
    356889 5ib7:A5 (2.99) BS01 rna ? GO:0003735 ... Q5SHP3 27174928
    356890 5ib7:A8 (2.99) BS01 rna ? GO:0003735 ... Q5SHQ4 27174928
    356891 5ib7:A8 (2.99) BS02 rna ? GO:0003735 ... Q5SHQ4 27174928
    356892 5ib7:AA (2.99) BS01 rna ? GO:0000028 ... Q5SHP2 27174928
    356893 5ib7:AI (2.99) BS01 rna ? GO:0000028 ... Q5SHP2 27174928
    356894 5ib7:B5 (2.99) BS01 rna ? GO:0003735 ... Q5SHP0 27174928
    356895 5ib7:B5 (2.99) BS02 MG ? GO:0003735 ... Q5SHP0 27174928
    356896 5ib7:B8 (2.99) BS01 rna ? GO:0003735 ... P60490 27174928
    356897 5ib7:B8 (2.99) BS02 rna ? GO:0003735 ... P60490 27174928
    356898 5ib7:BA (2.99) BS01 rna ? GO:0003723 ... P80380 27174928
    356899 5ib7:BI (2.99) BS01 rna ? GO:0003723 ... P80380 27174928
    356900 5ib7:C5 (2.99) BS01 rna ? GO:0003723 ... Q5SHP9 27174928
    356901 5ib7:C5 (2.99) BS02 MG ? GO:0003723 ... Q5SHP9 27174928
    356902 5ib7:C8 (2.99) BS01 rna ? GO:0000027 ... P60491 27174928
    356903 5ib7:D5 (2.99) BS01 rna ? GO:0003723 ... Q5SHZ1 27174928
    356904 5ib7:D5 (2.99) BS02 rna ? GO:0003723 ... Q5SHZ1 27174928
    356905 5ib7:D8 (2.99) BS01 rna ? GO:0003723 ... P60492 27174928
    356906 5ib7:D8 (2.99) BS02 MG ? GO:0003723 ... P60492 27174928
    356907 5ib7:E5 (2.99) BS01 rna ? GO:0003735 ... P60493 27174928
    356908 5ib7:E5 (2.99) BS02 rna ? GO:0003735 ... P60493 27174928
    356909 5ib7:E8 (2.99) BS01 rna ? GO:0003735 ... Q5SHP3 27174928
    356910 5ib7:F5 (2.99) BS01 rna ? GO:0003735 ... P60494 27174928
    356911 5ib7:F8 (2.99) BS01 rna ? GO:0003735 ... Q5SHP0 27174928
    356912 5ib7:G5 (2.99) BS01 rna ? GO:0003735 ... Q5SHP6 27174928
    356913 5ib7:G8 (2.99) BS01 rna ? GO:0003723 ... Q5SHP9 27174928
    356914 5ib7:H5 (2.99) BS01 rna ? GO:0003735 ... Q5SHQ6 27174928
    356915 5ib7:H5 (2.99) BS02 rna ? GO:0003735 ... Q5SHQ6 27174928
    356916 5ib7:H8 (2.99) BS01 rna ? GO:0003723 ... Q5SHZ1 27174928
    356917 5ib7:I8 (2.99) BS01 rna ? GO:0003735 ... P60493 27174928
    356918 5ib7:I8 (2.99) BS02 rna ? GO:0003735 ... P60493 27174928
    356919 5ib7:J5 (2.99) BS01 rna ? GO:0003735 ... P80339 27174928
    356920 5ib7:J8 (2.99) BS01 rna ? GO:0003735 ... P60494 27174928
    356921 5ib7:K8 (2.99) BS01 rna ? GO:0003735 ... Q5SHP6 27174928
    356922 5ib7:L5 (2.99) BS01 rna ? GO:0003735 ... P80340 27174928
    356923 5ib7:L8 (2.99) BS01 rna ? GO:0003735 ... Q5SHQ6 27174928
    356924 5ib7:L8 (2.99) BS02 rna ? GO:0003735 ... Q5SHQ6 27174928
    356925 5ib7:M5 (2.99) BS01 rna ? GO:0003735 ... Q5SKU1 27174928
    356926 5ib7:M8 (2.99) BS01 rna ? GO:0003735 ... Q5SJE1 27174928
    356927 5ib7:N8 (2.99) BS01 rna ? GO:0003735 ... P80339 27174928
    356928 5ib7:O8 (2.99) BS01 rna ? GO:0000049 ... P35871 27174928
    356929 5ib7:P8 (2.99) BS01 rna ? GO:0003735 ... P80340 27174928
    356930 5ib7:Q8 (2.99) BS01 rna ? GO:0003735 ... Q5SKU1 27174928
    356931 5ib8:11 (3.13) BS01 rna ? GO:0002181 ... P60405 27174928
    356932 5ib8:11 (3.13) BS02 MG ? GO:0002181 ... P60405 27174928
    356933 5ib8:12 (3.13) BS01 rna ? GO:0003735 ... P80371 27174928
    356934 5ib8:15 (3.13) BS01 rna ? GO:0003729 ... P60488 27174928
    356935 5ib8:19 (3.13) BS01 rna ? GO:0002181 ... P60405 27174928
    356936 5ib8:19 (3.13) BS02 MG ? GO:0002181 ... P60405 27174928
    356937 5ib8:1A (3.13) BS01 rna ? GO:0000049 ... Q5SHN7 27174928
    356938 5ib8:1E (3.13) BS01 rna ? GO:0003735 ... P80371 27174928
    356939 5ib8:1I (3.13) BS01 rna ? GO:0000049 ... Q5SHN7 27174928
    356940 5ib8:21 (3.13) BS01 rna ? GO:0003735 ... Q5SHN8 27174928
    356941 5ib8:21 (3.13) BS02 MG ? GO:0003735 ... Q5SHN8 27174928
    356942 5ib8:22 (3.13) BS01 rna ? GO:0003676 ... P80372 27174928
    356943 5ib8:22 (3.13) BS02 rna ? GO:0003676 ... P80372 27174928
    356944 5ib8:25 (3.13) BS01 rna ? GO:0003735 ... Q5SHP8 27174928
    356945 5ib8:25 (3.13) BS02 rna ? GO:0003735 ... Q5SHP8 27174928
    356946 5ib8:29 (3.13) BS01 rna ? GO:0003735 ... Q5SHN8 27174928
    356947 5ib8:2A (3.13) BS01 rna ? GO:0003735 ... P80376 27174928
    356948 5ib8:2A (3.13) BS02 MG ? GO:0003735 ... P80376 27174928
    356949 5ib8:2E (3.13) BS01 rna ? GO:0003676 ... P80372 27174928
    356950 5ib8:2I (3.13) BS01 rna ? GO:0003735 ... P80376 27174928
    356951 5ib8:2I (3.13) BS02 MG ? GO:0003735 ... P80376 27174928
    356952 5ib8:31 (3.13) BS01 rna ? GO:0003735 ... Q5SHN9 27174928
    356953 5ib8:31 (3.13) BS02 MG ? GO:0003735 ... Q5SHN9 27174928
    356954 5ib8:32 (3.13) BS01 rna ? GO:0003723 ... P80373 27174928
    356955 5ib8:32 (3.13) BS02 SF4 ? GO:0003723 ... P80373 27174928
    356956 5ib8:35 (3.13) BS01 rna ? GO:0003735 ... Q5SHQ7 27174928
    356957 5ib8:39 (3.13) BS01 rna ? GO:0003735 ... Q5SHN9 27174928
    356958 5ib8:39 (3.13) BS02 MG ? GO:0003735 ... Q5SHN9 27174928
    356959 5ib8:39 (3.13) BS03 MG ? GO:0003735 ... Q5SHN9 27174928
    356960 5ib8:3A (3.13) BS01 rna ? GO:0000049 ... Q5SHN3 27174928
    356961 5ib8:3E (3.13) BS01 rna ? GO:0003723 ... P80373 27174928
    356962 5ib8:3E (3.13) BS02 SF4 ? GO:0003723 ... P80373 27174928
    356963 5ib8:3I (3.13) BS01 rna ? GO:0000049 ... Q5SHN3 27174928
    356964 5ib8:3I (3.13) BS02 MG ? GO:0000049 ... Q5SHN3 27174928
    356965 5ib8:41 (3.13) BS01 rna ? GO:0000049 ... Q5SHQ0 27174928
    356966 5ib8:41 (3.13) BS02 rna ? GO:0000049 ... Q5SHQ0 27174928
    356967 5ib8:41 (3.13) BS03 MG ? GO:0000049 ... Q5SHQ0 27174928
    356968 5ib8:42 (3.13) BS01 rna ? GO:0003723 ... Q5SHQ5 27174928
    356969 5ib8:42 (3.13) BS02 rna ? GO:0003723 ... Q5SHQ5 27174928
    356970 5ib8:42 (3.13) BS03 MG ? GO:0003723 ... Q5SHQ5 27174928
    356971 5ib8:45 (3.13) BS01 rna ? GO:0000049 ... P60489 27174928
    356972 5ib8:45 (3.13) BS02 rna ? GO:0000049 ... P60489 27174928
    356973 5ib8:45 (3.13) BS03 rna ? GO:0000049 ... P60489 27174928
    356974 5ib8:45 (3.13) BS04 MG ? GO:0000049 ... P60489 27174928
    356975 5ib8:49 (3.13) BS01 rna ? GO:0000049 ... Q5SHQ0 27174928
    356976 5ib8:49 (3.13) BS02 rna ? GO:0000049 ... Q5SHQ0 27174928
    356977 5ib8:49 (3.13) BS03 rna ? GO:0000049 ... Q5SHQ0 27174928
    356978 5ib8:4A (3.13) BS01 rna ? GO:0000049 ... P80377 27174928
    356979 5ib8:4E (3.13) BS01 rna ? GO:0003723 ... Q5SHQ5 27174928
    356980 5ib8:4E (3.13) BS02 rna ? GO:0003723 ... Q5SHQ5 27174928
    356981 5ib8:4I (3.13) BS01 rna ? GO:0000049 ... P80377 27174928
    356982 5ib8:51 (3.13) BS01 rna N/A GO:0003735 ... N/A 27174928
    356983 5ib8:52 (3.13) BS01 rna ? GO:0003735 ... Q5SLP8 27174928
    356984 5ib8:55 (3.13) BS01 rna ? GO:0003735 ... Q9Z9H5 27174928
    356985 5ib8:58 (3.13) BS01 rna ? GO:0003729 ... P60488 27174928
    356986 5ib8:59 (3.13) BS01 rna N/A GO:0003735 ... N/A 27174928
    356987 5ib8:5A (3.13) BS01 rna N/A GO:0003735 ... N/A 27174928
    356988 5ib8:5E (3.13) BS01 rna ? GO:0003735 ... Q5SLP8 27174928
    356989 5ib8:5I (3.13) BS01 rna N/A GO:0003735 ... N/A 27174928
    356990 5ib8:5I (3.13) BS02 ZN N/A GO:0003735 ... N/A 27174928
    356991 5ib8:61 (3.13) BS01 rna ? GO:0003735 ... Q5SLQ1 27174928
    356992 5ib8:62 (3.13) BS01 rna ? GO:0000049 ... P17291 27174928
    356993 5ib8:65 (3.13) BS01 rna ? GO:0003735 ... Q5SHQ4 27174928
    356994 5ib8:65 (3.13) BS02 rna ? GO:0003735 ... Q5SHQ4 27174928
    356995 5ib8:68 (3.13) BS01 rna ? GO:0003735 ... Q5SHP8 27174928
    356996 5ib8:68 (3.13) BS02 rna ? GO:0003735 ... Q5SHP8 27174928
    356997 5ib8:69 (3.13) BS01 rna ? GO:0003735 ... Q5SLQ1 27174928
    356998 5ib8:69 (3.13) BS02 rna ? GO:0003735 ... Q5SLQ1 27174928
    356999 5ib8:6A (3.13) BS01 rna ? GO:0003735 ... Q5SJ76 27174928
    357000 5ib8:6A (3.13) BS02 rna ? GO:0003735 ... Q5SJ76 27174928

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).