SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    357401 5iea:B (3.258) BS02 ZN 2.3.2.27
    6.1.1.11
    GO:0000166 ... P34945
    Q0PF16
    27253059
    357402 5iea:C (3.258) BS01 ZN 2.3.2.27
    6.1.1.11
    GO:0000166 ... P34945
    Q0PF16
    27253059
    357403 5iea:C (3.258) BS02 ZN 2.3.2.27
    6.1.1.11
    GO:0000166 ... P34945
    Q0PF16
    27253059
    357404 5iea:D (3.258) BS01 ZN 2.3.2.27
    6.1.1.11
    GO:0000166 ... P34945
    Q0PF16
    27253059
    357405 5iea:D (3.258) BS02 ZN 2.3.2.27
    6.1.1.11
    GO:0000166 ... P34945
    Q0PF16
    27253059
    357406 5iea:F (3.258) BS01 ZN 2.3.2.27
    6.1.1.11
    GO:0000166 ... P34945
    Q0PF16
    27253059
    357407 5iea:F (3.258) BS02 ZN 2.3.2.27
    6.1.1.11
    GO:0000166 ... P34945
    Q0PF16
    27253059
    357408 5iea:K (3.258) BS01 ZN 2.3.2.27
    6.1.1.11
    GO:0000166 ... P34945
    Q0PF16
    27253059
    357409 5iea:K (3.258) BS02 ZN 2.3.2.27
    6.1.1.11
    GO:0000166 ... P34945
    Q0PF16
    27253059
    357410 5ied:A (1.81) BS01 CTS 3.2.1.207 GO:0003824 ... Q8BHN3 27462106
    357411 5ied:B (1.81) BS01 CA ? N/A O08795 27462106
    357412 5ied:B (1.81) BS02 CA ? N/A O08795 27462106
    357413 5iee:A (1.92) BS01 NOJ 3.2.1.207 GO:0003824 ... Q8BHN3 27462106
    357414 5iee:B (1.92) BS01 CA ? N/A O08795 27462106
    357415 5iee:B (1.92) BS02 CA ? N/A O08795 27462106
    357416 5ief:A (2.38) BS01 NBV 3.2.1.207 GO:0003824 ... Q8BHN3 27462106
    357417 5ief:B (2.38) BS01 CA ? N/A O08795 27462106
    357418 5ief:B (2.38) BS02 CA ? N/A O08795 27462106
    357419 5ieg:A (1.822) BS01 6A9 3.2.1.207 GO:0003824 ... Q8BHN3 27462106
    357420 5ieg:B (1.822) BS01 CA ? N/A O08795 27462106
    357421 5ieg:B (1.822) BS02 CA ? N/A O08795 27462106
    357422 5ieh:A (1.5) BS01 peptide ? N/A P01889 N/A
    357423 5iek:A (1.8) BS01 peptide ? N/A P01889 N/A
    357424 5iel:A (1.15) BS01 6B9 3.2.1.17 GO:0003796 ... P00698 N/A
    357425 5ien:A (2.089) BS01 VDY N/A N/A N/A 30566669
    357426 5ien:B (2.089) BS01 VDY N/A N/A N/A 30566669
    357427 5ieo:A (1.851) BS01 VDY N/A N/A N/A 30566669
    357428 5iep:A (1.893) BS01 VDY N/A N/A N/A 30566669
    357429 5ieq:A (2.2) BS01 1CI 3.1.-.- GO:0003723 ... P15659 N/A
    357430 5ier:A (2.005) BS01 3QZ N/A N/A N/A 28980354
    357431 5ier:B (2.005) BS01 3QZ N/A N/A N/A 28980354
    357432 5ier:C (2.005) BS01 3QZ N/A N/A N/A 28980354
    357433 5ier:D (2.005) BS01 3QZ N/A N/A N/A 28980354
    357434 5iev:A (2.03) BS01 R0N 2.7.11.22 GO:0000082 ... P24941 27090615
    357435 5iex:A (2.03) BS01 6AF 2.7.11.22 GO:0000082 ... P24941 27090615
    357436 5iey:A (1.66) BS01 6AE 2.7.11.22 GO:0000082 ... P24941 27090615
    357437 5iez:A (2.6) BS01 6AL ? GO:0042981 ... Q07820 27878989 BindingDB: Ki=23nM
    357438 5iez:B (2.6) BS01 6AL ? GO:0042981 ... Q07820 27878989 BindingDB: Ki=23nM
    357439 5iez:C (2.6) BS01 6AL ? GO:0042981 ... Q07820 27878989 BindingDB: Ki=23nM
    357440 5iez:D (2.6) BS01 6AL ? GO:0042981 ... Q07820 27878989 BindingDB: Ki=23nM
    357441 5if2:A (2.35) BS01 6B1 3.1.-.- GO:0003723 ... P15659 N/A
    357442 5if4:A (2.392) BS01 6AK ? GO:0042981 ... Q07820 27878989 MOAD: Ki<1nM
    BindingDB: Ki=<1.000000nM
    357443 5if4:B (2.392) BS01 6AK ? GO:0042981 ... Q07820 27878989 MOAD: Ki<1nM
    BindingDB: Ki=<1.000000nM
    357444 5if5:A (2.25) BS01 6B0 3.1.-.- GO:0003723 ... P15659 N/A
    357445 5if6:A (2.501) BS01 3QZ N/A N/A N/A 28980354
    357446 5if6:B (2.501) BS01 3QZ N/A N/A N/A 28980354
    357447 5if6:C (2.501) BS01 3QZ N/A N/A N/A 28980354
    357448 5if6:D (2.501) BS01 3QZ N/A N/A N/A 28980354
    357449 5if6:E (2.501) BS01 3QZ N/A N/A N/A 28980354
    357450 5if6:F (2.501) BS01 3QZ N/A N/A N/A 28980354
    357451 5if7:A (2.65) BS01 6AY 3.1.-.- GO:0003723 ... P15659 N/A
    357452 5if8:A (2.3) BS01 6AX 3.1.-.- GO:0003723 ... P15659 N/A
    357453 5if9:A (1.8) BS01 ANP ? GO:0000166 ... A0QTQ5 N/A
    357454 5if9:B (1.8) BS01 ANP ? GO:0000166 ... A0QTQ5 N/A
    357455 5ifb:A (2.45) BS01 6AV 3.1.-.- GO:0003723 ... P15659 N/A
    357456 5ifc:A (2.65) BS01 6AR 3.1.-.- GO:0003723 ... P15659 N/A
    357457 5ifd:A (2.65) BS01 6AQ 3.1.-.- GO:0003723 ... P15659 N/A
    357458 5ife:D (3.1) BS01 ZN ? GO:0000398 ... Q7RTV0 27720643
    357459 5ife:D (3.1) BS02 ZN ? GO:0000398 ... Q7RTV0 27720643
    357460 5ife:D (3.1) BS03 ZN ? GO:0000398 ... Q7RTV0 27720643
    357461 5iff:A (1.9) BS01 dna ? N/A Q9V2B6 27731370
    357462 5iff:B (1.9) BS01 dna ? N/A Q9V2B6 27731370
    357463 5ifi:A (1.95) BS01 PRX 6.2.1.1 GO:0003987 ... J9VFT1 N/A
    357464 5ifi:B (1.95) BS01 PRX 6.2.1.1 GO:0003987 ... J9VFT1 N/A
    357465 5ifi:C (1.95) BS01 PRX 6.2.1.1 GO:0003987 ... J9VFT1 N/A
    357466 5ifj:A (2.35) BS01 peptide N/A N/A N/A 28878138
    357467 5ifj:B (2.35) BS01 peptide N/A N/A N/A 28878138
    357468 5ifj:D (2.35) BS01 peptide N/A N/A N/A 28878138
    357469 5ifj:E (2.35) BS01 peptide N/A N/A N/A 28878138
    357470 5ifj:G (2.35) BS01 peptide N/A N/A N/A 28878138
    357471 5ifj:H (2.35) BS01 peptide N/A N/A N/A 28878138
    357472 5ifj:J (2.35) BS01 peptide N/A N/A N/A 28878138
    357473 5ifj:K (2.35) BS01 peptide N/A N/A N/A 28878138
    357474 5ifk:A (1.967) BS01 HPA 2.4.2.1 GO:0003824 ... Q6CSZ6 27768715
    357475 5ifk:B (1.967) BS01 HPA 2.4.2.1 GO:0003824 ... Q6CSZ6 27768715
    357476 5ifk:C (1.967) BS01 HPA 2.4.2.1 GO:0003824 ... Q6CSZ6 27768715
    357477 5ifl:A (2.6) BS01 TCL 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    357478 5ifl:A (2.6) BS02 NAD 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    357479 5ifl:B (2.6) BS01 TCL 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    357480 5ifl:B (2.6) BS02 NAD 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    357481 5ifl:C (2.6) BS01 TCL 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    357482 5ifl:C (2.6) BS02 NAD 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    357483 5ifl:D (2.6) BS01 TCL 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    357484 5ifl:D (2.6) BS02 NAD 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    357485 5ifl:E (2.6) BS01 TCL 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    357486 5ifl:E (2.6) BS02 NAD 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    357487 5ifl:F (2.6) BS01 TCL 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    357488 5ifl:F (2.6) BS02 NAD 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    357489 5ifl:G (2.6) BS01 TCL 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    357490 5ifl:G (2.6) BS02 NAD 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    357491 5ifl:H (2.6) BS01 TCL 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    357492 5ifl:H (2.6) BS02 NAD 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    357493 5ifl:I (2.6) BS01 TCL 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    357494 5ifl:I (2.6) BS02 NAD 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    357495 5ifl:J (2.6) BS01 TCL 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    357496 5ifl:J (2.6) BS02 NAD 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    357497 5ifl:K (2.6) BS01 TCL 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    357498 5ifl:K (2.6) BS02 NAD 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    357499 5ifl:L (2.6) BS01 TCL 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    357500 5ifl:L (2.6) BS02 NAD 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    357501 5ifl:M (2.6) BS01 TCL 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    357502 5ifl:M (2.6) BS02 NAD 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    357503 5ifl:N (2.6) BS01 TCL 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    357504 5ifl:N (2.6) BS02 NAD 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    357505 5ifl:O (2.6) BS01 TCL 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    357506 5ifl:O (2.6) BS02 NAD 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    357507 5ifl:P (2.6) BS01 TCL 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    357508 5ifl:P (2.6) BS02 NAD 1.3.1.9 GO:0000166 ... A0A0H3HP34 28225601
    357509 5ifm:A (2.6) BS01 PRO ? GO:0003676 ... Q15233 27303796
    357510 5ifm:C (2.6) BS01 PRO ? GO:0003676 ... Q15233 27303796
    357511 5ifo:A (3.2) BS01 RU ? GO:0003677 ... P02768 27196130
    357512 5ifp:A (1.71) BS01 MAN 3.2.1.23 GO:0004553 ... A2QAN3 28391618
    357513 5ifp:A (1.71) BS02 MAN 3.2.1.23 GO:0004553 ... A2QAN3 28391618
    357514 5ifp:A (1.71) BS03 MAN 3.2.1.23 GO:0004553 ... A2QAN3 28391618
    357515 5ifp:A (1.71) BS04 MAN 3.2.1.23 GO:0004553 ... A2QAN3 28391618
    357516 5ifp:A (1.71) BS05 MAN 3.2.1.23 GO:0004553 ... A2QAN3 28391618
    357517 5ifs:B (2.46) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 27762274
    357518 5ifs:D (2.46) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 27762274
    357519 5ift:A (2.45) BS01 MAN 3.2.1.23 GO:0004553 ... A2QAN3 28391618
    357520 5ift:A (2.45) BS02 MAN 3.2.1.23 GO:0004553 ... A2QAN3 28391618
    357521 5ift:A (2.45) BS03 MAN 3.2.1.23 GO:0004553 ... A2QAN3 28391618
    357522 5ift:A (2.45) BS04 MAN 3.2.1.23 GO:0004553 ... A2QAN3 28391618
    357523 5ift:A (2.45) BS05 MAN 3.2.1.23 GO:0004553 ... A2QAN3 28391618
    357524 5ift:A (2.45) BS06 GLC 3.2.1.23 GO:0004553 ... A2QAN3 28391618
    357525 5ift:A (2.45) BS07 GAL 3.2.1.23 GO:0004553 ... A2QAN3 28391618
    357526 5ifu:A (2.45) BS01 GBM 6.1.1.15 GO:0000166 ... Q8I5R7 27798837 MOAD: ic50=34uM
    357527 5ifu:B (2.45) BS01 GBM 6.1.1.15 GO:0000166 ... Q8I5R7 27798837 MOAD: ic50=34uM
    357528 5ifw:B (3.4) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 27762274
    357529 5ifw:B (3.4) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 27762274
    357530 5ify:A (2.25) BS01 TRH 2.7.7.24 GO:0008879 ... A4JC15 N/A
    357531 5ify:A (2.25) BS02 UMP 2.7.7.24 GO:0008879 ... A4JC15 N/A
    357532 5ify:A (2.25) BS03 UMP 2.7.7.24 GO:0008879 ... A4JC15 N/A
    357533 5ify:B (2.25) BS01 UMP 2.7.7.24 GO:0008879 ... A4JC15 N/A
    357534 5ify:B (2.25) BS02 TRH 2.7.7.24 GO:0008879 ... A4JC15 N/A
    357535 5ify:B (2.25) BS03 UMP 2.7.7.24 GO:0008879 ... A4JC15 N/A
    357536 5ify:C (2.25) BS01 TRH 2.7.7.24 GO:0008879 ... A4JC15 N/A
    357537 5ify:C (2.25) BS02 UMP 2.7.7.24 GO:0008879 ... A4JC15 N/A
    357538 5ify:C (2.25) BS03 UMP 2.7.7.24 GO:0008879 ... A4JC15 N/A
    357539 5ify:D (2.25) BS01 UMP 2.7.7.24 GO:0008879 ... A4JC15 N/A
    357540 5ify:D (2.25) BS02 TRH 2.7.7.24 GO:0008879 ... A4JC15 N/A
    357541 5ify:D (2.25) BS03 UMP 2.7.7.24 GO:0008879 ... A4JC15 N/A
    357542 5ify:E (2.25) BS01 TRH 2.7.7.24 GO:0008879 ... A4JC15 N/A
    357543 5ify:E (2.25) BS02 UMP 2.7.7.24 GO:0008879 ... A4JC15 N/A
    357544 5ify:F (2.25) BS01 TRH 2.7.7.24 GO:0008879 ... A4JC15 N/A
    357545 5ify:F (2.25) BS02 UMP 2.7.7.24 GO:0008879 ... A4JC15 N/A
    357546 5ig2:A (1.8) BS01 NAD ? GO:0000166 ... B2JGP2 N/A
    357547 5ig2:B (1.8) BS01 NAD ? GO:0000166 ... B2JGP2 N/A
    357548 5ig2:C (1.8) BS01 NAD ? GO:0000166 ... B2JGP2 N/A
    357549 5ig6:A (0.91) BS01 6B3 ? N/A P25440 27243809 MOAD: Kd=213.7uM
    357550 5ig7:A (1.97) BS01 peptide N/A N/A N/A 28878138
    357551 5ig7:B (1.97) BS01 peptide N/A N/A N/A 28878138
    357552 5ig7:D (1.97) BS01 peptide N/A N/A N/A 28878138
    357553 5ig7:E (1.97) BS01 peptide N/A N/A N/A 28878138
    357554 5ig7:G (1.97) BS01 peptide N/A N/A N/A 28878138
    357555 5ig7:H (1.97) BS01 peptide N/A N/A N/A 28878138
    357556 5ig7:J (1.97) BS01 peptide N/A N/A N/A 28878138
    357557 5ig7:K (1.97) BS01 peptide N/A N/A N/A 28878138
    357558 5ig9:A (2.665) BS01 peptide ? GO:0005737 ... B2G3D0 27669417
    357559 5ig9:B (2.665) BS01 peptide ? GO:0005737 ... B2G3D0 27669417
    357560 5ig9:C (2.665) BS01 peptide ? GO:0005737 ... B2G3D0 27669417
    357561 5ig9:D (2.665) BS01 peptide ? GO:0005737 ... B2G3D0 27669417
    357562 5ig9:D (2.665) BS02 peptide ? GO:0005737 ... B2G3D0 27669417
    357563 5ig9:E (2.665) BS01 peptide ? GO:0005737 ... B2G3D0 27669417
    357564 5ig9:F (2.665) BS01 peptide ? GO:0005737 ... B2G3D0 27669417
    357565 5ig9:G (2.665) BS01 peptide ? GO:0005737 ... B2G3D0 27669417
    357566 5ig9:G (2.665) BS02 peptide ? GO:0005737 ... B2G3D0 27669417
    357567 5ig9:H (2.665) BS01 peptide ? GO:0005737 ... B2G3D0 27669417
    357568 5ig9:H (2.665) BS02 peptide ? GO:0005737 ... B2G3D0 27669417
    357569 5igb:A (1.8) BS01 CA 3.1.31.1 GO:0003676 ... P00644 N/A
    357570 5igb:A (1.8) BS02 THP 3.1.31.1 GO:0003676 ... P00644 N/A
    357571 5igc:A (1.8) BS01 CA 3.1.31.1 GO:0003676 ... P00644 N/A
    357572 5igc:A (1.8) BS02 THP 3.1.31.1 GO:0003676 ... P00644 N/A
    357573 5igd:A (1.8) BS01 CA 3.1.31.1 GO:0003676 ... P00644 N/A
    357574 5igd:A (1.8) BS02 THP 3.1.31.1 GO:0003676 ... P00644 N/A
    357575 5ige:A (1.8) BS01 CA 3.1.31.1 GO:0003676 ... P00644 N/A
    357576 5ige:A (1.8) BS02 THP 3.1.31.1 GO:0003676 ... P00644 N/A
    357577 5igf:A (1.7) BS01 CA 3.1.31.1 GO:0003676 ... P00644 N/A
    357578 5igf:A (1.7) BS02 THP 3.1.31.1 GO:0003676 ... P00644 N/A
    357579 5igg:A (1.7) BS01 CA 3.1.31.1 GO:0003676 ... P00644 N/A
    357580 5igg:A (1.7) BS02 THP 3.1.31.1 GO:0003676 ... P00644 N/A
    357581 5igi:A (1.2) BS01 GMP ? GO:0016740 ... Q47396 28416110
    357582 5igi:A (1.2) BS02 ZIT ? GO:0016740 ... Q47396 28416110 MOAD: Kd=0.17uM
    357583 5igj:A (1.4) BS01 GMP ? GO:0016740 ... Q47396 28416110
    357584 5igj:A (1.4) BS02 CTY ? GO:0016740 ... Q47396 28416110 MOAD: Kd=0.18uM
    357585 5igk:A (1.7) BS01 BMF ? N/A O60885 27757418 MOAD: Kd=41.8nM
    BindingDB: Kd=42nM, IC50=116nM
    357586 5igl:A (2.1) BS01 BMF ? GO:0004402 ... Q8IZX4 27757418 MOAD: Kd=42.7nM
    BindingDB: Kd=25000nM
    357587 5igm:A (1.6) BS01 BMF ? N/A Q9H8M2 27757418 MOAD: Kd=41.7nM
    BindingDB: IC50=47nM, Kd=114nM
    357588 5igm:B (1.6) BS01 BMF ? N/A Q9H8M2 27757418 MOAD: Kd=41.7nM
    BindingDB: IC50=47nM, Kd=114nM
    357589 5ign:A (1.7) BS01 6B2 ? N/A Q9H8M2 N/A BindingDB: Kd=99nM, IC50=6200nM
    357590 5ign:B (1.7) BS01 6B2 ? N/A Q9H8M2 N/A BindingDB: Kd=99nM, IC50=6200nM
    357591 5igo:A (1.6) BS01 peptide 2.3.2.27 GO:0061630 ... P43254 27041596
    357592 5igo:B (1.6) BS01 peptide 2.3.2.27 GO:0061630 ... P43254 27041596
    357593 5igo:C (1.6) BS01 peptide 2.3.2.27 GO:0061630 ... P43254 27041596
    357594 5igo:C (1.6) BS02 peptide 2.3.2.27 GO:0061630 ... P43254 27041596
    357595 5igo:D (1.6) BS01 peptide 2.3.2.27 GO:0061630 ... P43254 27041596
    357596 5igo:D (1.6) BS02 peptide 2.3.2.27 GO:0061630 ... P43254 27041596
    357597 5igp:A (1.6) BS01 GDP ? GO:0016740 ... Q47396 28416110
    357598 5igp:A (1.6) BS02 ERY ? GO:0016740 ... Q47396 28416110 MOAD: Kd=0.2uM
    357599 5igq:A (3.9) BS01 peptide 2.3.2.27 GO:0061630 ... Q8NHY2 27041596
    357600 5igq:B (3.9) BS01 peptide 2.3.2.27 GO:0061630 ... Q8NHY2 27041596

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).