SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    358001 5ili:A (1.9) BS02 3FX 4.2.3.61 GO:0000287 ... Q40577 N/A
    358002 5ili:A (1.9) BS03 3CX 4.2.3.61 GO:0000287 ... Q40577 N/A
    358003 5ilm:A (1.7) BS01 4HE 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 27687333
    358004 5ilo:A (2.71) BS01 NAD 1.1.1.-
    1.1.1.105
    GO:0000166 ... Q9VV42 27809489
    358005 5ilo:B (2.71) BS01 NAD 1.1.1.-
    1.1.1.105
    GO:0000166 ... Q9VV42 27809489
    358006 5ilp:A (1.88) BS01 6CQ 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 27687333
    358007 5ilr:A (1.87) BS01 4HE 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 27687333
    358008 5ilw:A (1.98) BS01 URI 3.2.2.22 GO:0000166 ... D9J2T9 30007053
    358009 5ilx:A (1.7) BS01 URA 3.2.2.22 GO:0000166 ... D9J2T9 N/A
    358010 5ily:A (2.45) BS01 MG 4.2.3.61 GO:0000287 ... Q40577 N/A
    358011 5im3:A (2.298) BS01 DTP 1.17.4.1 GO:0004748 ... Q9I4I1 27133024 MOAD: Kd~1.5uM
    358012 5im3:A (2.298) BS02 DTP 1.17.4.1 GO:0004748 ... Q9I4I1 27133024 MOAD: Kd~1.5uM
    358013 5im3:A (2.298) BS03 DTP 1.17.4.1 GO:0004748 ... Q9I4I1 27133024 MOAD: Kd~1.5uM
    358014 5im3:A (2.298) BS04 DTP 1.17.4.1 GO:0004748 ... Q9I4I1 27133024 MOAD: Kd~1.5uM
    358015 5im3:B (2.298) BS01 DTP 1.17.4.1 GO:0004748 ... Q9I4I1 27133024 MOAD: Kd~1.5uM
    358016 5im3:B (2.298) BS02 DTP 1.17.4.1 GO:0004748 ... Q9I4I1 27133024 MOAD: Kd~1.5uM
    358017 5im3:B (2.298) BS03 DTP 1.17.4.1 GO:0004748 ... Q9I4I1 27133024 MOAD: Kd~1.5uM
    358018 5im3:B (2.298) BS04 DTP 1.17.4.1 GO:0004748 ... Q9I4I1 27133024 MOAD: Kd~1.5uM
    358019 5im7:A (2.502) BS01 peptide ? N/A P01889 27638468
    358020 5im7:C (2.502) BS01 peptide ? N/A P01889 27638468
    358021 5imd:A (1.16) BS01 O 1.11.1.24 GO:0004601 ... Q8P9V9 27594682
    358022 5ime:A (2.217) BS01 6BZ 2.7.11.1 GO:0004672 ... Q13153 27167326 MOAD: Ki=4.6nM
    BindingDB: Ki=4.6nM
    358023 5ime:B (2.217) BS01 6BZ 2.7.11.1 GO:0004672 ... Q13153 27167326 MOAD: Ki=4.6nM
    BindingDB: Ki=4.6nM
    358024 5img:C (1.844) BS01 CO N/A GO:0006508 ... N/A N/A
    358025 5img:E (1.844) BS01 CO N/A GO:0006508 ... N/A N/A
    358026 5img:G (1.844) BS01 CO N/A GO:0006508 ... N/A N/A
    358027 5img:H (1.844) BS01 CO N/A GO:0006508 ... N/A N/A
    358028 5imh:B (2.471) BS01 CO N/A GO:0006508 ... N/A N/A
    358029 5imh:C (2.471) BS01 CO N/A GO:0006508 ... N/A N/A
    358030 5imi:A (2.462) BS01 POP 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358031 5imi:A (2.462) BS02 MG 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358032 5imi:A (2.462) BS03 JF1 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358033 5imi:B (2.462) BS01 POP 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358034 5imi:B (2.462) BS02 MG 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358035 5imi:B (2.462) BS03 JF1 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358036 5imi:C (2.462) BS01 POP 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358037 5imi:C (2.462) BS02 MG 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358038 5imi:C (2.462) BS03 JF1 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358039 5imi:D (2.462) BS01 POP 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358040 5imi:D (2.462) BS02 MG 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358041 5imi:D (2.462) BS03 JF1 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358042 5imn:A (2.527) BS01 POP 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358043 5imn:A (2.527) BS02 MG 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358044 5imn:A (2.527) BS03 JF1 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358045 5imn:B (2.527) BS01 POP 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358046 5imn:B (2.527) BS02 MG 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358047 5imn:B (2.527) BS03 JF1 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358048 5imn:C (2.527) BS01 POP 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358049 5imn:C (2.527) BS02 MG 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358050 5imn:C (2.527) BS03 JF1 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358051 5imn:D (2.527) BS01 POP 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358052 5imn:D (2.527) BS02 MG 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358053 5imn:D (2.527) BS03 JF1 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358054 5imp:A (2.038) BS01 POP 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358055 5imp:A (2.038) BS02 MG 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358056 5imp:A (2.038) BS03 JF1 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358057 5imp:B (2.038) BS01 POP 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358058 5imp:B (2.038) BS02 MG 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358059 5imp:B (2.038) BS03 JF1 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358060 5imp:C (2.038) BS01 POP 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358061 5imp:C (2.038) BS02 MG 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358062 5imp:C (2.038) BS03 JF1 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358063 5imp:D (2.038) BS01 POP 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358064 5imp:D (2.038) BS02 MG 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358065 5imp:D (2.038) BS03 JF1 4.2.3.9 GO:0010333 ... Q9UR08 27172425
    358066 5imq:1 (3.8) BS01 rna ? GO:0003735 ... Q5SHR2 27137929
    358067 5imq:2 (3.8) BS01 rna ? GO:0005840 ... Q8VVE3 27137929
    358068 5imq:3 (3.8) BS01 rna ? GO:0003735 ... Q5SLP6 27137929
    358069 5imq:B (3.8) BS01 rna 3.6.5.n1 GO:0003746 ... Q5SKA7 27137929
    358070 5imq:B (3.8) BS02 rna 3.6.5.n1 GO:0003746 ... Q5SKA7 27137929
    358071 5imq:B (3.8) BS03 rna 3.6.5.n1 GO:0003746 ... Q5SKA7 27137929
    358072 5imq:F (3.8) BS01 rna ? GO:0003735 ... P80371 27137929
    358073 5imq:G (3.8) BS01 rna ? GO:0003676 ... P80372 27137929
    358074 5imq:H (3.8) BS01 rna ? GO:0003723 ... P80373 27137929
    358075 5imq:I (3.8) BS01 rna ? GO:0003723 ... Q5SHQ5 27137929
    358076 5imq:J (3.8) BS01 rna ? GO:0003735 ... Q5SLP8 27137929
    358077 5imq:K (3.8) BS01 rna ? GO:0000049 ... P17291 27137929
    358078 5imq:K (3.8) BS02 rna ? GO:0000049 ... P17291 27137929
    358079 5imq:L (3.8) BS01 rna N/A GO:0003735 ... N/A 27137929
    358080 5imq:M (3.8) BS01 rna ? GO:0000049 ... P80374 27137929
    358081 5imq:M (3.8) BS02 rna ? GO:0000049 ... P80374 27137929
    358082 5imq:N (3.8) BS01 rna ? GO:0000049 ... Q5SHN7 27137929
    358083 5imq:O (3.8) BS01 rna ? GO:0003735 ... P80376 27137929
    358084 5imq:P (3.8) BS01 rna ? GO:0000049 ... Q5SHN3 27137929
    358085 5imq:Q (3.8) BS01 rna ? GO:0000049 ... P80377 27137929
    358086 5imq:R (3.8) BS01 rna N/A GO:0003735 ... N/A 27137929
    358087 5imq:S (3.8) BS01 rna ? GO:0003735 ... Q5SJ76 27137929
    358088 5imq:S (3.8) BS02 rna ? GO:0003735 ... Q5SJ76 27137929
    358089 5imq:T (3.8) BS01 rna ? GO:0003735 ... Q5SJH3 27137929
    358090 5imq:U (3.8) BS01 rna ? GO:0003735 ... P24321 27137929
    358091 5imq:V (3.8) BS01 rna ? GO:0003735 ... P80382 27137929
    358092 5imq:W (3.8) BS01 rna ? GO:0000028 ... Q5SHP2 27137929
    358093 5imq:X (3.8) BS01 rna ? GO:0003723 ... P80380 27137929
    358094 5imq:Z (3.8) BS01 rna ? GO:0000049 ... P27150 27137929
    358095 5imq:Z (3.8) BS02 rna ? GO:0000049 ... P27150 27137929
    358096 5imq:a (3.8) BS01 rna ? GO:0002181 ... P60405 27137929
    358097 5imq:a (3.8) BS02 rna ? GO:0002181 ... P60405 27137929
    358098 5imq:b (3.8) BS01 rna ? GO:0003735 ... Q5SHN8 27137929
    358099 5imq:c (3.8) BS01 rna ? GO:0003735 ... Q5SHN9 27137929
    358100 5imq:d (3.8) BS01 rna ? GO:0000049 ... Q5SHQ0 27137929
    358101 5imq:d (3.8) BS02 rna ? GO:0000049 ... Q5SHQ0 27137929
    358102 5imq:d (3.8) BS03 rna ? GO:0000049 ... Q5SHQ0 27137929
    358103 5imq:e (3.8) BS01 rna N/A GO:0003735 ... N/A 27137929
    358104 5imq:f (3.8) BS01 rna ? GO:0003729 ... P60488 27137929
    358105 5imq:g (3.8) BS01 rna ? GO:0003735 ... P60558 27137929
    358106 5imq:g (3.8) BS02 rna ? GO:0003735 ... P60558 27137929
    358107 5imq:h (3.8) BS01 rna ? GO:0003735 ... Q5SHQ7 27137929
    358108 5imq:i (3.8) BS01 rna ? GO:0000049 ... P60489 27137929
    358109 5imq:i (3.8) BS02 rna ? GO:0000049 ... P60489 27137929
    358110 5imq:j (3.8) BS01 rna ? GO:0003735 ... Q9Z9H5 27137929
    358111 5imq:k (3.8) BS01 rna ? GO:0003735 ... Q5SHQ4 27137929
    358112 5imq:k (3.8) BS02 rna ? GO:0003735 ... Q5SHQ4 27137929
    358113 5imq:l (3.8) BS01 rna ? GO:0003735 ... P60490 27137929
    358114 5imq:l (3.8) BS02 rna ? GO:0003735 ... P60490 27137929
    358115 5imq:m (3.8) BS01 rna ? GO:0000027 ... P60491 27137929
    358116 5imq:n (3.8) BS01 rna ? GO:0003723 ... P60492 27137929
    358117 5imq:o (3.8) BS01 rna ? GO:0003735 ... Q5SHP3 27137929
    358118 5imq:p (3.8) BS01 rna ? GO:0003735 ... Q5SHP0 27137929
    358119 5imq:q (3.8) BS01 rna ? GO:0003723 ... Q5SHP9 27137929
    358120 5imq:r (3.8) BS01 rna ? GO:0003723 ... Q5SHZ1 27137929
    358121 5imq:r (3.8) BS02 rna ? GO:0003723 ... Q5SHZ1 27137929
    358122 5imq:s (3.8) BS01 rna ? GO:0003735 ... P60493 27137929
    358123 5imq:s (3.8) BS02 rna ? GO:0003735 ... P60493 27137929
    358124 5imq:t (3.8) BS01 rna ? GO:0003735 ... Q9LCY4 27137929
    358125 5imq:u (3.8) BS01 rna ? GO:0003735 ... Q5SHQ6 27137929
    358126 5imq:v (3.8) BS01 rna ? GO:0003735 ... Q5SJE1 27137929
    358127 5imq:v (3.8) BS02 rna ? GO:0003735 ... Q5SJE1 27137929
    358128 5imq:w (3.8) BS01 rna ? GO:0003735 ... P80339 27137929
    358129 5imq:x (3.8) BS01 rna ? GO:0000049 ... P35871 27137929
    358130 5imq:y (3.8) BS01 rna ? GO:0003735 ... P80340 27137929
    358131 5imq:z (3.8) BS01 rna ? GO:0003735 ... Q5SKU1 27137929
    358132 5imr:1 (5.7) BS01 rna ? GO:0003735 ... Q5SHR2 27137929
    358133 5imr:2 (5.7) BS01 rna ? GO:0005840 ... Q8VVE3 27137929
    358134 5imr:3 (5.7) BS01 rna ? GO:0003735 ... Q5SLP6 27137929
    358135 5imr:C (5.7) BS01 rna 3.6.5.n1 GO:0003746 ... Q5SKA7 27137929
    358136 5imr:C (5.7) BS02 rna 3.6.5.n1 GO:0003746 ... Q5SKA7 27137929
    358137 5imr:C (5.7) BS03 rna 3.6.5.n1 GO:0003746 ... Q5SKA7 27137929
    358138 5imr:F (5.7) BS01 rna ? GO:0003735 ... P80371 27137929
    358139 5imr:G (5.7) BS01 rna ? GO:0003676 ... P80372 27137929
    358140 5imr:H (5.7) BS01 rna ? GO:0003723 ... P80373 27137929
    358141 5imr:I (5.7) BS01 rna ? GO:0003723 ... Q5SHQ5 27137929
    358142 5imr:J (5.7) BS01 rna ? GO:0003735 ... Q5SLP8 27137929
    358143 5imr:K (5.7) BS01 rna ? GO:0000049 ... P17291 27137929
    358144 5imr:L (5.7) BS01 rna N/A GO:0003735 ... N/A 27137929
    358145 5imr:M (5.7) BS01 rna ? GO:0000049 ... P80374 27137929
    358146 5imr:M (5.7) BS02 rna ? GO:0000049 ... P80374 27137929
    358147 5imr:N (5.7) BS01 rna ? GO:0000049 ... Q5SHN7 27137929
    358148 5imr:O (5.7) BS01 rna ? GO:0003735 ... P80376 27137929
    358149 5imr:P (5.7) BS01 rna ? GO:0000049 ... Q5SHN3 27137929
    358150 5imr:Q (5.7) BS01 rna ? GO:0000049 ... P80377 27137929
    358151 5imr:R (5.7) BS01 rna N/A GO:0003735 ... N/A 27137929
    358152 5imr:S (5.7) BS01 rna ? GO:0003735 ... Q5SJ76 27137929
    358153 5imr:S (5.7) BS02 rna ? GO:0003735 ... Q5SJ76 27137929
    358154 5imr:T (5.7) BS01 rna ? GO:0003735 ... Q5SJH3 27137929
    358155 5imr:U (5.7) BS01 rna ? GO:0003735 ... P24321 27137929
    358156 5imr:V (5.7) BS01 rna ? GO:0003735 ... P80382 27137929
    358157 5imr:W (5.7) BS01 rna ? GO:0000028 ... Q5SHP2 27137929
    358158 5imr:X (5.7) BS01 rna ? GO:0003723 ... P80380 27137929
    358159 5imr:Z (5.7) BS01 rna ? GO:0000049 ... P27150 27137929
    358160 5imr:Z (5.7) BS02 rna ? GO:0000049 ... P27150 27137929
    358161 5imr:a (5.7) BS01 rna ? GO:0002181 ... P60405 27137929
    358162 5imr:b (5.7) BS01 rna ? GO:0003735 ... Q5SHN8 27137929
    358163 5imr:c (5.7) BS01 rna ? GO:0003735 ... Q5SHN9 27137929
    358164 5imr:d (5.7) BS01 rna ? GO:0000049 ... Q5SHQ0 27137929
    358165 5imr:d (5.7) BS02 rna ? GO:0000049 ... Q5SHQ0 27137929
    358166 5imr:d (5.7) BS03 rna ? GO:0000049 ... Q5SHQ0 27137929
    358167 5imr:e (5.7) BS01 rna N/A GO:0003735 ... N/A 27137929
    358168 5imr:f (5.7) BS01 rna ? GO:0003729 ... P60488 27137929
    358169 5imr:g (5.7) BS01 rna ? GO:0003735 ... P60558 27137929
    358170 5imr:h (5.7) BS01 rna ? GO:0003735 ... Q5SHQ7 27137929
    358171 5imr:i (5.7) BS01 rna ? GO:0000049 ... P60489 27137929
    358172 5imr:i (5.7) BS02 rna ? GO:0000049 ... P60489 27137929
    358173 5imr:j (5.7) BS01 rna ? GO:0003735 ... Q9Z9H5 27137929
    358174 5imr:k (5.7) BS01 rna ? GO:0003735 ... Q5SHQ4 27137929
    358175 5imr:k (5.7) BS02 rna ? GO:0003735 ... Q5SHQ4 27137929
    358176 5imr:l (5.7) BS01 rna ? GO:0003735 ... P60490 27137929
    358177 5imr:l (5.7) BS02 rna ? GO:0003735 ... P60490 27137929
    358178 5imr:m (5.7) BS01 rna ? GO:0000027 ... P60491 27137929
    358179 5imr:n (5.7) BS01 rna ? GO:0003723 ... P60492 27137929
    358180 5imr:o (5.7) BS01 rna ? GO:0003735 ... Q5SHP3 27137929
    358181 5imr:p (5.7) BS01 rna ? GO:0003735 ... Q5SHP0 27137929
    358182 5imr:q (5.7) BS01 rna ? GO:0003723 ... Q5SHP9 27137929
    358183 5imr:r (5.7) BS01 rna ? GO:0003723 ... Q5SHZ1 27137929
    358184 5imr:r (5.7) BS02 rna ? GO:0003723 ... Q5SHZ1 27137929
    358185 5imr:s (5.7) BS01 rna ? GO:0003735 ... P60493 27137929
    358186 5imr:s (5.7) BS02 rna ? GO:0003735 ... P60493 27137929
    358187 5imr:s (5.7) BS03 rna ? GO:0003735 ... P60493 27137929
    358188 5imr:t (5.7) BS01 rna ? GO:0003735 ... Q9LCY4 27137929
    358189 5imr:u (5.7) BS01 rna ? GO:0003735 ... Q5SHQ6 27137929
    358190 5imr:u (5.7) BS02 rna ? GO:0003735 ... Q5SHQ6 27137929
    358191 5imr:v (5.7) BS01 rna ? GO:0003735 ... Q5SJE1 27137929
    358192 5imr:v (5.7) BS02 rna ? GO:0003735 ... Q5SJE1 27137929
    358193 5imr:w (5.7) BS01 rna ? GO:0003735 ... P80339 27137929
    358194 5imr:x (5.7) BS01 rna ? GO:0000049 ... P35871 27137929
    358195 5imr:y (5.7) BS01 rna ? GO:0003735 ... P80340 27137929
    358196 5imr:z (5.7) BS01 rna ? GO:0003735 ... Q5SKU1 27137929
    358197 5ims:A (1.984) BS01 FAD 2.2.1.6 GO:0000287 ... P07342 N/A
    358198 5ims:A (1.984) BS02 MG 2.2.1.6 GO:0000287 ... P07342 N/A
    358199 5ims:A (1.984) BS03 TPP 2.2.1.6 GO:0000287 ... P07342 N/A
    358200 5ims:A (1.984) BS04 OXY 2.2.1.6 GO:0000287 ... P07342 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).