SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 1786 1787 1788 1789 1790 1791 1792 1793 1794 1795 1796 1797 1798 1799 1800 1801 1802 1803 1804 1805 1806 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    359001 5it5:F (2.648) BS02 ATP ? N/A Q5SLC9 27667690
    359002 5it7:1 (3.6) BS01 rna N/A GO:0003924 ... N/A 27159451
    359003 5it7:1 (3.6) BS02 rna N/A GO:0003924 ... N/A 27159451
    359004 5it7:1 (3.6) BS03 rna N/A GO:0003924 ... N/A 27159451
    359005 5it7:1 (3.6) BS04 MG N/A GO:0003924 ... N/A 27159451
    359006 5it7:1 (3.6) BS05 6EM N/A GO:0003924 ... N/A 27159451
    359007 5it7:A (3.6) BS01 rna ? GO:0003735 ... Q6CN12 27159451
    359008 5it7:AA (3.6) BS01 rna ? GO:0002181 ... Q6CQM3 27159451
    359009 5it7:AA (3.6) BS02 rna ? GO:0002181 ... Q6CQM3 27159451
    359010 5it7:B (3.6) BS01 rna ? GO:0003735 ... Q6CWD0 27159451
    359011 5it7:B (3.6) BS02 rna ? GO:0003735 ... Q6CWD0 27159451
    359012 5it7:BB (3.6) BS01 rna ? GO:0003723 ... Q6CJR7 27159451
    359013 5it7:C (3.6) BS01 rna ? GO:0003723 ... Q6CKL3 27159451
    359014 5it7:CC (3.6) BS01 rna ? GO:0003735 ... Q6CW41 27159451
    359015 5it7:CC (3.6) BS02 rna ? GO:0003735 ... Q6CW41 27159451
    359016 5it7:D (3.6) BS01 rna ? GO:0003723 ... Q6CRK7 27159451
    359017 5it7:D (3.6) BS02 rna ? GO:0003723 ... Q6CRK7 27159451
    359018 5it7:DD (3.6) BS01 rna ? GO:0000027 ... Q6CRR9 27159451
    359019 5it7:DD (3.6) BS02 rna ? GO:0000027 ... Q6CRR9 27159451
    359020 5it7:E (3.6) BS01 rna ? GO:0003723 ... Q6CWJ2 27159451
    359021 5it7:EE (3.6) BS01 rna ? GO:0000027 ... Q6CWE7 27159451
    359022 5it7:F (3.6) BS01 rna ? GO:0003723 ... Q6CRA3 27159451
    359023 5it7:F (3.6) BS02 rna ? GO:0003723 ... Q6CRA3 27159451
    359024 5it7:FF (3.6) BS01 rna ? GO:0000463 ... Q6CS71 27159451
    359025 5it7:FF (3.6) BS02 rna ? GO:0000463 ... Q6CS71 27159451
    359026 5it7:G (3.6) BS01 rna ? GO:0003735 ... Q6CM04 27159451
    359027 5it7:GG (3.6) BS01 rna ? GO:0003723 ... B4UN96 27159451
    359028 5it7:GG (3.6) BS02 rna ? GO:0003723 ... B4UN96 27159451
    359029 5it7:H (3.6) BS01 rna ? GO:0003735 ... Q6CTD6 27159451
    359030 5it7:HH (3.6) BS01 rna ? GO:0002181 ... Q6CLA6 27159451
    359031 5it7:I (3.6) BS01 rna ? GO:0003735 ... Q6CMG3 27159451
    359032 5it7:I (3.6) BS02 rna ? GO:0003735 ... Q6CMG3 27159451
    359033 5it7:II (3.6) BS01 rna ? GO:0003735 ... Q6CRX7 27159451
    359034 5it7:II (3.6) BS02 rna ? GO:0003735 ... Q6CRX7 27159451
    359035 5it7:J (3.6) BS01 rna ? GO:0003723 ... Q6CM18 27159451
    359036 5it7:JJ (3.6) BS01 rna ? GO:0003735 ... Q6CKT4 27159451
    359037 5it7:JJ (3.6) BS02 rna ? GO:0003735 ... Q6CKT4 27159451
    359038 5it7:K (3.6) BS01 rna ? GO:0003723 ... Q6CVZ5 27159451
    359039 5it7:KK (3.6) BS01 rna N/A N/A N/A 27159451
    359040 5it7:L (3.6) BS01 rna ? GO:0003735 ... Q6CX80 27159451
    359041 5it7:LL (3.6) BS01 rna ? GO:0003723 ... Q875M0 27159451
    359042 5it7:LL (3.6) BS02 rna ? GO:0003723 ... Q875M0 27159451
    359043 5it7:M (3.6) BS01 rna ? GO:0003735 ... Q6CLU4 27159451
    359044 5it7:MM (3.6) BS01 rna ? GO:0003723 ... Q6CVB1 27159451
    359045 5it7:N (3.6) BS01 rna ? GO:0003735 ... Q6CJK0 27159451
    359046 5it7:N (3.6) BS02 rna ? GO:0003735 ... Q6CJK0 27159451
    359047 5it7:NN (3.6) BS01 rna ? GO:0002181 ... Q6CJL7 27159451
    359048 5it7:NN (3.6) BS02 rna ? GO:0002181 ... Q6CJL7 27159451
    359049 5it7:O (3.6) BS01 rna ? GO:0003735 ... P27069 27159451
    359050 5it7:OO (3.6) BS01 rna ? GO:0003729 ... Q6CL98 27159451
    359051 5it7:P (3.6) BS01 rna ? GO:0003723 ... Q6CKV4 27159451
    359052 5it7:PP (3.6) BS01 rna ? GO:0002181 ... Q6CXQ6 27159451
    359053 5it7:PP (3.6) BS02 rna ? GO:0002181 ... Q6CXQ6 27159451
    359054 5it7:Q (3.6) BS01 rna ? GO:0000462 ... Q875N2 27159451
    359055 5it7:QQ (3.6) BS01 rna ? GO:0003723 ... Q6CXL8 27159451
    359056 5it7:R (3.6) BS01 rna ? GO:0003735 ... Q6CWU3 27159451
    359057 5it7:RR (3.6) BS01 rna ? GO:0003723 ... Q6CNH9 27159451
    359058 5it7:RR (3.6) BS02 rna ? GO:0003723 ... Q6CNH9 27159451
    359059 5it7:S (3.6) BS01 rna ? GO:0003676 ... Q6CWT9 27159451
    359060 5it7:SS (3.6) BS01 rna N/A GO:0003735 ... N/A 27159451
    359061 5it7:SS (3.6) BS02 rna N/A GO:0003735 ... N/A 27159451
    359062 5it7:T (3.6) BS01 rna ? GO:0000028 ... Q6CXM0 27159451
    359063 5it7:TT (3.6) BS01 rna ? GO:0003735 ... Q6CM20 27159451
    359064 5it7:TT (3.6) BS02 rna ? GO:0003735 ... Q6CM20 27159451
    359065 5it7:U (3.6) BS01 rna ? GO:0003735 ... Q6CIM1 27159451
    359066 5it7:UU (3.6) BS01 rna ? GO:0003735 ... Q6CRZ8 27159451
    359067 5it7:V (3.6) BS01 rna ? GO:0003735 ... Q6CXT6 27159451
    359068 5it7:VV (3.6) BS01 rna ? GO:0003735 ... Q6CP75 27159451
    359069 5it7:VV (3.6) BS02 rna ? GO:0003735 ... Q6CP75 27159451
    359070 5it7:W (3.6) BS01 rna ? GO:0003735 ... Q6CW21 27159451
    359071 5it7:WW (3.6) BS01 rna ? GO:0003735 ... P38665 27159451
    359072 5it7:X (3.6) BS01 rna ? GO:0003735 ... Q875M3 27159451
    359073 5it7:XX (3.6) BS01 rna ? GO:0003735 ... P48045 27159451
    359074 5it7:XX (3.6) BS02 rna ? GO:0003735 ... P48045 27159451
    359075 5it7:Y (3.6) BS01 rna ? GO:0003735 ... Q6CU44 27159451
    359076 5it7:YY (3.6) BS01 rna ? GO:0003723 ... Q6CW97 27159451
    359077 5it7:YY (3.6) BS02 rna ? GO:0003723 ... Q6CW97 27159451
    359078 5it7:Z (3.6) BS01 rna ? N/A Q6CW78 27159451
    359079 5it7:Z (3.6) BS02 rna ? N/A Q6CW78 27159451
    359080 5it7:ZZ (3.6) BS01 rna ? GO:0003735 ... Q6CPN9 27159451
    359081 5it7:a (3.6) BS01 rna ? GO:0003735 ... Q6CS01 27159451
    359082 5it7:a (3.6) BS02 ZN ? GO:0003735 ... Q6CS01 27159451
    359083 5it7:a (3.6) BS03 MG ? GO:0003735 ... Q6CS01 27159451
    359084 5it7:aa (3.6) BS01 rna ? GO:0003735 ... Q8J287 27159451
    359085 5it7:b (3.6) BS01 rna ? GO:0003735 ... Q6CNL2 27159451
    359086 5it7:b (3.6) BS02 ZN ? GO:0003735 ... Q6CNL2 27159451
    359087 5it7:bb (3.6) BS01 rna ? GO:0002181 ... Q6CQM1 27159451
    359088 5it7:c (3.6) BS01 rna ? GO:0000028 ... P33285 27159451
    359089 5it7:cc (3.6) BS01 rna ? GO:0003723 ... P38664 27159451
    359090 5it7:d (3.6) BS01 rna ? GO:0002181 ... Q6CPG3 27159451
    359091 5it7:dd (3.6) BS01 rna ? GO:0002181 ... Q6CWM6 27159451
    359092 5it7:e (3.6) BS01 rna ? GO:0003735 ... Q6CUH5 27159451
    359093 5it7:ee (3.6) BS01 rna ? GO:0003735 ... Q6CP82 27159451
    359094 5it7:f (3.6) BS01 rna ? GO:0003735 ... P69061 27159451
    359095 5it7:f (3.6) BS02 ZN ? GO:0003735 ... P69061 27159451
    359096 5it7:ff (3.6) BS01 rna ? GO:0003735 ... Q6CRP7 27159451
    359097 5it7:g (3.6) BS01 rna ? GO:0006417 ... Q6CNI7 27159451
    359098 5it7:gg (3.6) BS01 rna ? GO:0003735 ... Q6CU17 27159451
    359099 5it7:hh (3.6) BS01 rna ? GO:0000463 ... Q6CL71 27159451
    359100 5it7:hh (3.6) BS02 rna ? GO:0000463 ... Q6CL71 27159451
    359101 5it7:ii (3.6) BS01 rna ? GO:0003735 ... Q6CR18 27159451
    359102 5it7:jj (3.6) BS01 rna ? GO:0003723 ... Q6CUW0 27159451
    359103 5it7:jj (3.6) BS02 rna ? GO:0003723 ... Q6CUW0 27159451
    359104 5it7:jj (3.6) BS03 ZN ? GO:0003723 ... Q6CUW0 27159451
    359105 5it7:kk (3.6) BS01 rna ? GO:0003735 ... Q6CSS8 27159451
    359106 5it7:ll (3.6) BS01 rna ? GO:0002181 ... P04650 27159451
    359107 5it7:ll (3.6) BS02 rna ? GO:0002181 ... P04650 27159451
    359108 5it7:mm (3.6) BS01 rna ? GO:0003735 ... Q9Y854 27159451
    359109 5it7:mm (3.6) BS02 ZN ? GO:0003735 ... Q9Y854 27159451
    359110 5it7:oo (3.6) BS01 rna ? GO:0003735 ... P31027 27159451
    359111 5it7:oo (3.6) BS02 ZN ? GO:0003735 ... P31027 27159451
    359112 5it7:pp (3.6) BS01 rna ? GO:0003735 ... Q6CPC5 27159451
    359113 5it7:qq (3.6) BS01 rna ? GO:0003723 ... Q6CWR9 27159451
    359114 5it7:qq (3.6) BS02 rna ? GO:0003723 ... Q6CWR9 27159451
    359115 5it7:rr (3.6) BS01 rna ? N/A Q6CW89 27159451
    359116 5it8:AB (3.12) BS01 rna ? GO:0000028 ... P0A7V0 27382179
    359117 5it8:AB (3.12) BS02 ZN ? GO:0000028 ... P0A7V0 27382179
    359118 5it8:AC (3.12) BS01 rna ? GO:0003676 ... P0A7V3 27382179
    359119 5it8:AD (3.12) BS01 rna ? GO:0000028 ... P0A7V8 27382179
    359120 5it8:AE (3.12) BS01 rna ? GO:0000028 ... P0A7W1 27382179
    359121 5it8:AF (3.12) BS01 rna ? GO:0003735 ... P02358 27382179
    359122 5it8:AG (3.12) BS01 rna ? GO:0003723 ... P02359 27382179
    359123 5it8:AH (3.12) BS01 rna ? GO:0000028 ... P0A7W7 27382179
    359124 5it8:AI (3.12) BS01 rna ? GO:0000049 ... P0A7X3 27382179
    359125 5it8:AJ (3.12) BS01 rna ? GO:0000049 ... P0A7R5 27382179
    359126 5it8:AK (3.12) BS01 rna ? GO:0002181 ... P0A7R9 27382179
    359127 5it8:AL (3.12) BS01 rna ? GO:0000049 ... P0A7S3 27382179
    359128 5it8:AM (3.12) BS01 rna ? GO:0000049 ... P0A7S9 27382179
    359129 5it8:AN (3.12) BS01 rna ? GO:0000028 ... P0AG59 27382179
    359130 5it8:AO (3.12) BS01 rna ? GO:0000028 ... P0ADZ4 27382179
    359131 5it8:AO (3.12) BS02 rna ? GO:0000028 ... P0ADZ4 27382179
    359132 5it8:AP (3.12) BS01 rna ? GO:0000028 ... P0A7T3 27382179
    359133 5it8:AQ (3.12) BS01 rna ? GO:0000028 ... P0AG63 27382179
    359134 5it8:AR (3.12) BS01 rna ? GO:0003735 ... P0A7T7 27382179
    359135 5it8:AS (3.12) BS01 rna ? GO:0003723 ... P0A7U3 27382179
    359136 5it8:AT (3.12) BS01 rna ? GO:0000028 ... P0A7U7 27382179
    359137 5it8:AU (3.12) BS01 rna ? GO:0003735 ... P68679 27382179
    359138 5it8:BB (3.12) BS01 rna ? GO:0000028 ... P0A7V0 27382179
    359139 5it8:BB (3.12) BS02 rna ? GO:0000028 ... P0A7V0 27382179
    359140 5it8:BC (3.12) BS01 rna ? GO:0003676 ... P0A7V3 27382179
    359141 5it8:BD (3.12) BS01 rna ? GO:0000028 ... P0A7V8 27382179
    359142 5it8:BD (3.12) BS02 rna ? GO:0000028 ... P0A7V8 27382179
    359143 5it8:BE (3.12) BS01 rna ? GO:0000028 ... P0A7W1 27382179
    359144 5it8:BF (3.12) BS01 rna ? GO:0003735 ... P02358 27382179
    359145 5it8:BG (3.12) BS01 rna ? GO:0003723 ... P02359 27382179
    359146 5it8:BH (3.12) BS01 rna ? GO:0000028 ... P0A7W7 27382179
    359147 5it8:BI (3.12) BS01 rna ? GO:0000049 ... P0A7X3 27382179
    359148 5it8:BJ (3.12) BS01 rna ? GO:0000049 ... P0A7R5 27382179
    359149 5it8:BK (3.12) BS01 rna ? GO:0002181 ... P0A7R9 27382179
    359150 5it8:BL (3.12) BS01 rna ? GO:0000049 ... P0A7S3 27382179
    359151 5it8:BM (3.12) BS01 rna ? GO:0000049 ... P0A7S9 27382179
    359152 5it8:BN (3.12) BS01 rna ? GO:0000028 ... P0AG59 27382179
    359153 5it8:BO (3.12) BS01 rna ? GO:0000028 ... P0ADZ4 27382179
    359154 5it8:BO (3.12) BS02 rna ? GO:0000028 ... P0ADZ4 27382179
    359155 5it8:BP (3.12) BS01 rna ? GO:0000028 ... P0A7T3 27382179
    359156 5it8:BQ (3.12) BS01 rna ? GO:0000028 ... P0AG63 27382179
    359157 5it8:BR (3.12) BS01 rna ? GO:0003735 ... P0A7T7 27382179
    359158 5it8:BS (3.12) BS01 rna ? GO:0003723 ... P0A7U3 27382179
    359159 5it8:BT (3.12) BS01 rna ? GO:0000028 ... P0A7U7 27382179
    359160 5it8:BU (3.12) BS01 rna ? GO:0003735 ... P68679 27382179
    359161 5it8:C0 (3.12) BS01 rna ? GO:0000027 ... P0AG51 27382179
    359162 5it8:C0 (3.12) BS02 rna ? GO:0000027 ... P0AG51 27382179
    359163 5it8:C1 (3.12) BS01 rna ? GO:0000027 ... P0A7N4 27382179
    359164 5it8:C2 (3.12) BS01 rna ? GO:0000027 ... P0A7N9 27382179
    359165 5it8:C3 (3.12) BS01 rna ? GO:0002181 ... P0A7P5 27382179
    359166 5it8:C4 (3.12) BS01 rna ? GO:0002181 ... P0A7Q1 27382179
    359167 5it8:C5 (3.12) BS01 rna ? GO:0002181 ... P0A7Q6 27382179
    359168 5it8:C5 (3.12) BS02 ZN ? GO:0002181 ... P0A7Q6 27382179
    359169 5it8:CC (3.12) BS01 rna ? GO:0000027 ... P60422 27382179
    359170 5it8:CC (3.12) BS02 rna ? GO:0000027 ... P60422 27382179
    359171 5it8:CD (3.12) BS01 rna ? GO:0000027 ... P60438 27382179
    359172 5it8:CE (3.12) BS01 rna ? GO:0001070 ... P60723 27382179
    359173 5it8:CF (3.12) BS01 rna ? GO:0000027 ... P62399 27382179
    359174 5it8:CF (3.12) BS02 rna ? GO:0000027 ... P62399 27382179
    359175 5it8:CG (3.12) BS01 rna ? GO:0000027 ... P0AG55 27382179
    359176 5it8:CH (3.12) BS01 rna ? GO:0002181 ... P0A7R1 27382179
    359177 5it8:CJ (3.12) BS01 rna ? GO:0000027 ... P0A7J7 27382179
    359178 5it8:CK (3.12) BS01 rna ? GO:0002181 ... P0AA10 27382179
    359179 5it8:CL (3.12) BS01 rna ? GO:0002181 ... P0ADY3 27382179
    359180 5it8:CL (3.12) BS02 rna ? GO:0002181 ... P0ADY3 27382179
    359181 5it8:CM (3.12) BS01 rna ? GO:0002181 ... P02413 27382179
    359182 5it8:CN (3.12) BS01 rna ? GO:0000027 ... P0ADY7 27382179
    359183 5it8:CN (3.12) BS02 rna ? GO:0000027 ... P0ADY7 27382179
    359184 5it8:CO (3.12) BS01 rna ? GO:0000027 ... P0AG44 27382179
    359185 5it8:CP (3.12) BS01 rna ? GO:0002181 ... P0C018 27382179
    359186 5it8:CP (3.12) BS02 rna ? GO:0002181 ... P0C018 27382179
    359187 5it8:CQ (3.12) BS01 rna ? GO:0000027 ... P0A7K6 27382179
    359188 5it8:CQ (3.12) BS02 rna ? GO:0000027 ... P0A7K6 27382179
    359189 5it8:CR (3.12) BS01 rna ? GO:0000027 ... P0A7L3 27382179
    359190 5it8:CS (3.12) BS01 rna ? GO:0002181 ... P0AG48 27382179
    359191 5it8:CT (3.12) BS01 rna ? GO:0002181 ... P61175 27382179
    359192 5it8:CU (3.12) BS01 rna ? GO:0000027 ... P0ADZ0 27382179
    359193 5it8:CV (3.12) BS01 rna ? GO:0000027 ... P60624 27382179
    359194 5it8:CW (3.12) BS01 rna ? GO:0000027 ... P68919 27382179
    359195 5it8:CW (3.12) BS02 rna ? GO:0000027 ... P68919 27382179
    359196 5it8:CX (3.12) BS01 rna ? GO:0003735 ... P0A7L8 27382179
    359197 5it8:CX (3.12) BS02 rna ? GO:0003735 ... P0A7L8 27382179
    359198 5it8:CY (3.12) BS01 rna ? GO:0000027 ... P0A7M2 27382179
    359199 5it8:CZ (3.12) BS01 rna ? GO:0000027 ... P0A7M6 27382179
    359200 5it8:D0 (3.12) BS01 rna ? GO:0000027 ... P0AG51 27382179

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).