SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    3401 1at1:C (2.8) BS01 MLI 2.1.3.2 GO:0004070 ... P0A786 2405902
    3402 1at1:C (2.8) BS02 PCT 2.1.3.2 GO:0004070 ... P0A786 2405902
    3403 1at1:D (2.8) BS01 ZN ? GO:0005515 ... P0A7F3 2405902
    3404 1at3:A (2.5) BS01 DFP 3.4.21.97 GO:0004252 ... Q69527 9369473
    3405 1at3:B (2.5) BS01 DFP 3.4.21.97 GO:0004252 ... Q69527 9369473
    3406 1at9:A (2.8) BS01 RET ? GO:0005216 ... P02945 9296502
    3407 1atg:A (1.2) BS01 WO4 ? GO:0015689 ... Q7SIH2 9862806
    3408 1ati:B (2.75) BS01 peptide 6.1.1.14 GO:0000166 ... P56206 7556056
    3409 1atj:A (2.15) BS01 CA 1.11.1.7 GO:0004601 ... P00433 9406554
    3410 1atj:A (2.15) BS02 CA 1.11.1.7 GO:0004601 ... P00433 9406554
    3411 1atj:A (2.15) BS03 HEM 1.11.1.7 GO:0004601 ... P00433 9406554
    3412 1atj:B (2.15) BS01 CA 1.11.1.7 GO:0004601 ... P00433 9406554
    3413 1atj:B (2.15) BS02 CA 1.11.1.7 GO:0004601 ... P00433 9406554
    3414 1atj:B (2.15) BS03 HEM 1.11.1.7 GO:0004601 ... P00433 9406554
    3415 1atj:C (2.15) BS01 CA 1.11.1.7 GO:0004601 ... P00433 9406554
    3416 1atj:C (2.15) BS02 CA 1.11.1.7 GO:0004601 ... P00433 9406554
    3417 1atj:C (2.15) BS03 HEM 1.11.1.7 GO:0004601 ... P00433 9406554
    3418 1atj:D (2.15) BS01 CA 1.11.1.7 GO:0004601 ... P00433 9406554
    3419 1atj:D (2.15) BS02 CA 1.11.1.7 GO:0004601 ... P00433 9406554
    3420 1atj:D (2.15) BS03 HEM 1.11.1.7 GO:0004601 ... P00433 9406554
    3421 1atj:E (2.15) BS01 CA 1.11.1.7 GO:0004601 ... P00433 9406554
    3422 1atj:E (2.15) BS02 CA 1.11.1.7 GO:0004601 ... P00433 9406554
    3423 1atj:E (2.15) BS03 HEM 1.11.1.7 GO:0004601 ... P00433 9406554
    3424 1atj:F (2.15) BS01 CA 1.11.1.7 GO:0004601 ... P00433 9406554
    3425 1atj:F (2.15) BS02 CA 1.11.1.7 GO:0004601 ... P00433 9406554
    3426 1atj:F (2.15) BS03 HEM 1.11.1.7 GO:0004601 ... P00433 9406554
    3427 1atk:A (2.2) BS01 E64 3.4.22.38 GO:0006508 ... P43235 9033588
    3428 1atl:A (1.8) BS01 ZN 3.4.24.42 GO:0004222 ... P15167 8078901
    3429 1atl:A (1.8) BS02 CA 3.4.24.42 GO:0004222 ... P15167 8078901
    3430 1atl:A (1.8) BS03 0QI 3.4.24.42 GO:0004222 ... P15167 8078901 MOAD: Ki=0.52uM
    3431 1atl:B (1.8) BS01 ZN 3.4.24.42 GO:0004222 ... P15167 8078901
    3432 1atl:B (1.8) BS02 CA 3.4.24.42 GO:0004222 ... P15167 8078901
    3433 1atl:B (1.8) BS03 0QI 3.4.24.42 GO:0004222 ... P15167 8078901 MOAD: Ki=0.52uM
    3434 1atn:A (2.8) BS01 ATP 3.6.4.- GO:0000287 ... P68135 2395459
    3435 1atn:D (2.8) BS01 CA 3.1.21.1 GO:0002283 ... P00639 2395459
    3436 1atn:D (2.8) BS02 CA 3.1.21.1 GO:0002283 ... P00639 2395459
    3437 1atn:D (2.8) BS03 CA 3.1.21.1 GO:0002283 ... P00639 2395459
    3438 1atp:E (2.2) BS01 peptide 2.7.11.11 GO:0000287 ... P05132 15299527
    3439 1atp:E (2.2) BS02 MN 2.7.11.11 GO:0000287 ... P05132 15299527
    3440 1atp:E (2.2) BS03 ATP 2.7.11.11 GO:0000287 ... P05132 15299527 MOAD: Kd=60nM
    3441 1atr:A (2.34) BS01 PO4 3.6.4.10 GO:0005524 ... P19120 8226982
    3442 1atr:A (2.34) BS02 ADP 3.6.4.10 GO:0005524 ... P19120 8226982
    3443 1ats:A (2.43) BS01 ADP 3.6.4.10 GO:0005524 ... P19120 8226982
    3444 1au0:A (2.6) BS01 SDK 3.4.22.38 GO:0006508 ... P43235 N/A BindingDB: Ki=22nM
    3445 1au1:A (2.2) BS01 BGC ? GO:0002250 ... P01574 9342320
    3446 1au1:B (2.2) BS01 ZN ? GO:0002250 ... P01574 9342320
    3447 1au2:A (2.6) BS01 POS 3.4.22.38 GO:0006508 ... P43235 N/A
    3448 1au3:A (2.5) BS01 PCM 3.4.22.38 GO:0006508 ... P43235 9733481
    3449 1au4:A (2.3) BS01 INP 3.4.22.38 GO:0006508 ... P43235 9733481
    3450 1au7:A (2.3) BS01 dna ? GO:0000981 ... P10037 9009203
    3451 1au7:A (2.3) BS02 dna ? GO:0000981 ... P10037 9009203
    3452 1au7:B (2.3) BS01 dna ? GO:0000981 ... P10037 9009203
    3453 1au7:B (2.3) BS02 dna ? GO:0000981 ... P10037 9009203
    3454 1au8:A (1.9) BS01 0H8 3.4.21.20 GO:0002003 ... P08311 N/A
    3455 1au9:A (1.8) BS01 CA 3.4.21.62 GO:0004252 ... P00782 2684274
    3456 1au9:A (1.8) BS02 CA 3.4.21.62 GO:0004252 ... P00782 2684274
    3457 1aud:A (-1.00) BS01 rna ? GO:0003676 ... P09012 9312034
    3458 1aui:A (2.1) BS01 ZN 3.1.3.16 GO:0004722 ... Q08209 8524402
    3459 1aui:A (2.1) BS02 FE 3.1.3.16 GO:0004722 ... Q08209 8524402
    3460 1aui:B (2.1) BS01 CA 3.1.3.16 GO:0004721 ... P63098 8524402
    3461 1aui:B (2.1) BS02 CA 3.1.3.16 GO:0004721 ... P63098 8524402
    3462 1aui:B (2.1) BS03 CA 3.1.3.16 GO:0004721 ... P63098 8524402
    3463 1aui:B (2.1) BS04 CA 3.1.3.16 GO:0004721 ... P63098 8524402
    3464 1auj:A (2.1) BS01 PPB 3.4.21.4 GO:0004175 ... P00760 9341205
    3465 1auk:A (2.1) BS01 MG 3.1.6.8 GO:0004065 ... P15289 9521684
    3466 1aus:L (2.2) BS01 MG 4.1.1.39 GO:0000287 ... P00875 9092835
    3467 1aus:M (2.2) BS01 MG 4.1.1.39 GO:0000287 ... P00875 9092835
    3468 1aus:N (2.2) BS01 MG 4.1.1.39 GO:0000287 ... P00875 9092835
    3469 1aus:O (2.2) BS01 MG 4.1.1.39 GO:0000287 ... P00875 9092835
    3470 1aut:C (2.8) BS01 0G6 3.4.21.69 GO:0004252 ... P04070 9003757
    3471 1aux:A (2.3) BS01 CA ? GO:0005524 ... P17599 9463376
    3472 1aux:A (2.3) BS02 AGS ? GO:0005524 ... P17599 9463376
    3473 1aux:B (2.3) BS01 CA ? GO:0005524 ... P17599 9463376
    3474 1aux:B (2.3) BS02 AGS ? GO:0005524 ... P17599 9463376
    3475 1av4:A (2.2) BS01 CU 1.4.3.21 GO:0005507 ... P46881 9405045
    3476 1av5:B (2.0) BS01 AP2 3.4.22.-
    3.9.1.-
    GO:0000118 ... P49773 9323207
    3477 1av6:A (2.8) BS01 rna 2.1.1.57 GO:0003746 ... P07617 9660928
    3478 1av6:A (2.8) BS02 MGT 2.1.1.57 GO:0003746 ... P07617 9660928
    3479 1av6:A (2.8) BS03 SAH 2.1.1.57 GO:0003746 ... P07617 9660928
    3480 1av8:A (2.8) BS01 FEO 1.17.4.1 GO:0004748 ... P69924 9558317
    3481 1av8:B (2.8) BS01 FEO 1.17.4.1 GO:0004748 ... P69924 9558317
    3482 1ava:A (1.9) BS01 CA 3.2.1.1 GO:0004556 ... P04063 9634702
    3483 1ava:A (1.9) BS02 CA 3.2.1.1 GO:0004556 ... P04063 9634702
    3484 1ava:A (1.9) BS03 CA 3.2.1.1 GO:0004556 ... P04063 9634702
    3485 1ava:B (1.9) BS01 CA 3.2.1.1 GO:0004556 ... P04063 9634702
    3486 1ava:B (1.9) BS02 CA 3.2.1.1 GO:0004556 ... P04063 9634702
    3487 1ava:B (1.9) BS03 CA 3.2.1.1 GO:0004556 ... P04063 9634702
    3488 1avc:A (2.9) BS01 CA ? GO:0001725 ... P79134 9748523
    3489 1avc:A (2.9) BS02 CA ? GO:0001725 ... P79134 9748523
    3490 1avc:A (2.9) BS03 CA ? GO:0001725 ... P79134 9748523
    3491 1avc:A (2.9) BS04 CA ? GO:0001725 ... P79134 9748523
    3492 1avc:A (2.9) BS05 CA ? GO:0001725 ... P79134 9748523
    3493 1avc:A (2.9) BS06 CA ? GO:0001725 ... P79134 9748523
    3494 1avd:A (2.7) BS01 BTN ? GO:0005576 ... P02701 8515446
    3495 1avd:B (2.7) BS01 BTN ? GO:0005576 ... P02701 8515446
    3496 1avf:A (2.36) BS01 peptide 3.4.23.3 GO:0004190 ... P20142 9406551
    3497 1avf:J (2.36) BS01 peptide 3.4.23.3 GO:0004190 ... P20142 9406551
    3498 1avh:A (2.3) BS01 CA ? GO:0001786 ... P08758 1311770
    3499 1avh:A (2.3) BS02 CA ? GO:0001786 ... P08758 1311770
    3500 1avh:A (2.3) BS03 CA ? GO:0001786 ... P08758 1311770
    3501 1avh:B (2.3) BS01 CA ? GO:0001786 ... P08758 1311770
    3502 1avh:B (2.3) BS02 CA ? GO:0001786 ... P08758 1311770
    3503 1avl:A (2.8) BS01 CU 1.4.3.21 GO:0005507 ... P46881 9405045
    3504 1avm:A (1.55) BS01 FE 1.15.1.1 GO:0004784 ... P80293 N/A
    3505 1avm:A (1.55) BS02 AZI 1.15.1.1 GO:0004784 ... P80293 N/A
    3506 1avm:B (1.55) BS01 FE 1.15.1.1 GO:0004784 ... P80293 N/A
    3507 1avm:B (1.55) BS02 AZI 1.15.1.1 GO:0004784 ... P80293 N/A
    3508 1avn:A (2.0) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 9265618
    3509 1avn:A (2.0) BS02 AZI 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 9265618 BindingDB: Ki=1500000nM
    3510 1avn:A (2.0) BS03 HSM 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 9265618 MOAD: Kd=0.125mM
    3511 1avp:A (2.6) BS01 peptide 3.4.22.39 GO:0003677 ... P03252 8617222
    3512 1avr:A (2.3) BS01 CA ? GO:0001786 ... P08758 1311770
    3513 1avr:A (2.3) BS02 CA ? GO:0001786 ... P08758 1311770
    3514 1avr:A (2.3) BS03 CA ? GO:0001786 ... P08758 1311770
    3515 1avr:A (2.3) BS04 CA ? GO:0001786 ... P08758 1311770
    3516 1avr:A (2.3) BS05 CA ? GO:0001786 ... P08758 1311770
    3517 1avs:A (1.75) BS01 CA ? GO:0005509 ... P02588 9367759
    3518 1avs:A (1.75) BS02 CA ? GO:0005509 ... P02588 9367759
    3519 1avs:B (1.75) BS01 CA ? GO:0005509 ... P02588 9367759
    3520 1avs:B (1.75) BS02 CA ? GO:0005509 ... P02588 9367759
    3521 1avw:A (1.75) BS01 CA 3.4.21.4 GO:0004252 ... P00761 9466914
    3522 1avx:A (1.9) BS01 CA 3.4.21.4 GO:0004252 ... P00761 9466914
    3523 1aw1:A (2.7) BS01 PGA 5.3.1.1 GO:0004807 ... P50921 9442062
    3524 1aw1:B (2.7) BS01 PGA 5.3.1.1 GO:0004807 ... P50921 9442062
    3525 1aw1:D (2.7) BS01 PGA 5.3.1.1 GO:0004807 ... P50921 9442062
    3526 1aw1:E (2.7) BS01 PGA 5.3.1.1 GO:0004807 ... P50921 9442062
    3527 1aw1:G (2.7) BS01 PGA 5.3.1.1 GO:0004807 ... P50921 9442062
    3528 1aw1:H (2.7) BS01 PGA 5.3.1.1 GO:0004807 ... P50921 9442062
    3529 1aw1:J (2.7) BS01 PGA 5.3.1.1 GO:0004807 ... P50921 9442062
    3530 1aw1:K (2.7) BS01 PGA 5.3.1.1 GO:0004807 ... P50921 9442062
    3531 1aw3:A (-1.00) BS01 HEM ? GO:0020037 ... P00173 9425037
    3532 1aw5:A (2.3) BS01 ZN 4.2.1.24 GO:0004655 ... P05373 9406553
    3533 1aw6:A (-1.00) BS01 CD ? GO:0000981 ... P04386 9460244
    3534 1aw6:A (-1.00) BS02 CD ? GO:0000981 ... P04386 9460244
    3535 1aw8:B (2.2) BS01 peptide 4.1.1.11 GO:0004068 ... P0A790 9546220
    3536 1aw8:E (2.2) BS01 peptide 4.1.1.11 GO:0004068 ... P0A790 9546220
    3537 1aw8:E (2.2) BS02 peptide 4.1.1.11 GO:0004068 ... P0A790 9546220
    3538 1awb:A (2.5) BS01 CA 3.1.3.25
    3.1.3.94
    GO:0000287 ... P29218 N/A
    3539 1awb:A (2.5) BS02 CA 3.1.3.25
    3.1.3.94
    GO:0000287 ... P29218 N/A
    3540 1awb:A (2.5) BS03 IPD 3.1.3.25
    3.1.3.94
    GO:0000287 ... P29218 N/A
    3541 1awb:B (2.5) BS01 CA 3.1.3.25
    3.1.3.94
    GO:0000287 ... P29218 N/A
    3542 1awb:B (2.5) BS02 CA 3.1.3.25
    3.1.3.94
    GO:0000287 ... P29218 N/A
    3543 1awb:B (2.5) BS03 IPD 3.1.3.25
    3.1.3.94
    GO:0000287 ... P29218 N/A
    3544 1awc:A (2.15) BS01 dna ? GO:0003700 ... Q00422 9461436
    3545 1awc:A (2.15) BS02 dna ? GO:0003700 ... Q00422 9461436
    3546 1awd:A (1.4) BS01 FES ? GO:0009055 ... P56408 10545324
    3547 1awf:H (2.2) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 9578548
    3548 1awf:H (2.2) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 9578548
    3549 1awf:H (2.2) BS03 GR4 3.4.21.5 GO:0004252 ... P00734 9578548
    3550 1awh:B (3.0) BS01 GR3 3.4.21.5 GO:0004252 ... P00734 9578548
    3551 1awh:D (3.0) BS01 GR3 3.4.21.5 GO:0004252 ... P00734 9578548
    3552 1awi:A (2.2) BS01 peptide ? GO:0000774 ... P07737 9360613
    3553 1awi:B (2.2) BS01 peptide ? GO:0000774 ... P07737 9360613
    3554 1awp:A (2.0) BS01 HEM ? GO:0020037 ... P04166 9484218
    3555 1awp:B (2.0) BS01 HEM ? GO:0020037 ... P04166 9484218
    3556 1awq:A (1.58) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 9385632
    3557 1awr:A (1.58) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 9385632
    3558 1awr:B (1.58) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 9385632
    3559 1awr:C (1.58) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 9385632
    3560 1awr:D (1.58) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 9385632
    3561 1awr:E (1.58) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 9385632
    3562 1awr:F (1.58) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 9385632
    3563 1aws:A (2.55) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 9385632
    3564 1awt:A (2.55) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 9385632
    3565 1awt:B (2.55) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 9385632
    3566 1awt:C (2.55) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 9385632
    3567 1awt:D (2.55) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 9385632
    3568 1awt:E (2.55) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 9385632
    3569 1awt:F (2.55) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 9385632
    3570 1awu:A (2.34) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 9385632
    3571 1awv:A (2.34) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 9385632
    3572 1awv:B (2.34) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 9385632
    3573 1awv:C (2.34) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 9385632
    3574 1awv:D (2.34) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 9385632
    3575 1awv:E (2.34) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 9385632
    3576 1awv:F (2.34) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 9385632
    3577 1ax0:A (1.9) BS01 MN ? GO:0030246 ... P16404 9545381
    3578 1ax0:A (1.9) BS02 CA ? GO:0030246 ... P16404 9545381
    3579 1ax1:A (1.95) BS01 BGC ? GO:0030246 ... P16404 9545381
    3580 1ax1:A (1.95) BS02 GAL ? GO:0030246 ... P16404 9545381
    3581 1ax1:A (1.95) BS03 MN ? GO:0030246 ... P16404 9545381
    3582 1ax1:A (1.95) BS04 CA ? GO:0030246 ... P16404 9545381
    3583 1ax2:A (1.95) BS01 GAL ? GO:0030246 ... P16404 9545381
    3584 1ax2:A (1.95) BS02 MN ? GO:0030246 ... P16404 9545381
    3585 1ax2:A (1.95) BS03 CA ? GO:0030246 ... P16404 9545381
    3586 1ax9:A (2.8) BS01 EDR 3.1.1.7 GO:0001507 ... P04058 10089512
    3587 1axa:A (2.0) BS01 U0E 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03366 9521105
    3588 1axa:A (2.0) BS02 U0E 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03366 9521105
    3589 1axa:B (2.0) BS01 U0E 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03366 9521105
    3590 1axa:B (2.0) BS02 U0E 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03366 9521105
    3591 1axb:A (2.0) BS01 FOS 3.5.2.6 GO:0005515 ... P62593 9485412
    3592 1axc:A (2.6) BS01 peptide ? GO:0000307 ... P12004 8861913
    3593 1axc:C (2.6) BS01 peptide ? GO:0000307 ... P12004 8861913
    3594 1axc:E (2.6) BS01 peptide ? GO:0000307 ... P12004 8861913
    3595 1axd:A (2.5) BS01 peptide 2.5.1.18 GO:0000302 ... P12653 9417926
    3596 1axd:B (2.5) BS01 peptide 2.5.1.18 GO:0000302 ... P12653 9417926
    3597 1axe:A (2.0) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 9371755
    3598 1axe:A (2.0) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 9371755
    3599 1axe:A (2.0) BS03 NAD 1.1.1.1 GO:0004022 ... P00327 9371755
    3600 1axe:B (2.0) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 9371755

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).