SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    360601 5j34:A (1.827) BS01 MG 1.1.1.85 GO:0000287 ... P93832 27137927
    360602 5j34:B (1.827) BS01 MG 1.1.1.85 GO:0000287 ... P93832 27137927
    360603 5j34:C (1.827) BS01 MG 1.1.1.85 GO:0000287 ... P93832 27137927
    360604 5j34:D (1.827) BS01 MG 1.1.1.85 GO:0000287 ... P93832 27137927
    360605 5j35:A (1.47) BS01 FUC ? N/A K4LM89 N/A
    360606 5j35:A (1.47) BS02 FUC ? N/A K4LM89 N/A
    360607 5j35:B (1.47) BS01 FUC ? N/A K4LM89 N/A
    360608 5j35:B (1.47) BS02 FUC ? N/A K4LM89 N/A
    360609 5j37:A (2.3) BS01 dna ? GO:0019062 ... A0A023R6W2 27698405
    360610 5j37:A (2.3) BS02 dna ? GO:0019062 ... A0A023R6W2 27698405
    360611 5j37:B (2.3) BS01 dna ? GO:0019062 ... A0A023R6W2 27698405
    360612 5j37:B (2.3) BS02 dna ? GO:0019062 ... A0A023R6W2 27698405
    360613 5j37:C (2.3) BS01 dna ? GO:0019062 ... A0A023R6W2 27698405
    360614 5j37:C (2.3) BS02 dna ? GO:0019062 ... A0A023R6W2 27698405
    360615 5j37:D (2.3) BS01 dna ? GO:0019062 ... A0A023R6W2 27698405
    360616 5j37:D (2.3) BS02 dna ? GO:0019062 ... A0A023R6W2 27698405
    360617 5j37:E (2.3) BS01 dna ? GO:0019062 ... A0A023R6W2 27698405
    360618 5j37:E (2.3) BS02 dna ? GO:0019062 ... A0A023R6W2 27698405
    360619 5j3c:QB (3.04) BS01 rna ? GO:0003735 ... P80371 27681416
    360620 5j3c:QB (3.04) BS02 MG ? GO:0003735 ... P80371 27681416
    360621 5j3c:QC (3.04) BS01 rna ? GO:0003676 ... P80372 27681416
    360622 5j3c:QD (3.04) BS01 rna ? GO:0003723 ... P80373 27681416
    360623 5j3c:QD (3.04) BS02 SF4 ? GO:0003723 ... P80373 27681416
    360624 5j3c:QE (3.04) BS01 rna ? GO:0003723 ... Q5SHQ5 27681416
    360625 5j3c:QE (3.04) BS02 MG ? GO:0003723 ... Q5SHQ5 27681416
    360626 5j3c:QF (3.04) BS01 rna ? GO:0003735 ... Q5SLP8 27681416
    360627 5j3c:QG (3.04) BS01 rna ? GO:0000049 ... P17291 27681416
    360628 5j3c:QH (3.04) BS01 rna ? GO:0003735 ... P0DOY9 27681416
    360629 5j3c:QI (3.04) BS01 rna ? GO:0000049 ... P80374 27681416
    360630 5j3c:QI (3.04) BS02 MG ? GO:0000049 ... P80374 27681416
    360631 5j3c:QJ (3.04) BS01 rna ? GO:0000049 ... Q5SHN7 27681416
    360632 5j3c:QK (3.04) BS01 rna ? GO:0003735 ... P80376 27681416
    360633 5j3c:QK (3.04) BS02 MG ? GO:0003735 ... P80376 27681416
    360634 5j3c:QL (3.04) BS01 rna ? GO:0000049 ... Q5SHN3 27681416
    360635 5j3c:QM (3.04) BS01 rna ? GO:0000049 ... P80377 27681416
    360636 5j3c:QN (3.04) BS01 rna ? GO:0003735 ... P0DOY6 27681416
    360637 5j3c:QN (3.04) BS02 ZN ? GO:0003735 ... P0DOY6 27681416
    360638 5j3c:QN (3.04) BS03 MG ? GO:0003735 ... P0DOY6 27681416
    360639 5j3c:QO (3.04) BS01 rna ? GO:0003735 ... Q5SJ76 27681416
    360640 5j3c:QP (3.04) BS01 rna ? GO:0003735 ... Q5SJH3 27681416
    360641 5j3c:QQ (3.04) BS01 rna ? GO:0003735 ... P0DOY7 27681416
    360642 5j3c:QR (3.04) BS01 rna ? GO:0003735 ... Q5SLQ0 27681416
    360643 5j3c:QS (3.04) BS01 rna ? GO:0000028 ... Q5SHP2 27681416
    360644 5j3c:QT (3.04) BS01 rna ? GO:0003723 ... P80380 27681416
    360645 5j3c:QY (3.04) BS01 rna ? GO:0003747 ... P0A7I0 27681416
    360646 5j3c:QY (3.04) BS02 rna ? GO:0003747 ... P0A7I0 27681416
    360647 5j3c:QY (3.04) BS03 rna ? GO:0003747 ... P0A7I0 27681416
    360648 5j3c:QY (3.04) BS04 rna ? GO:0003747 ... P0A7I0 27681416
    360649 5j3c:R0 (3.04) BS01 rna ? GO:0003735 ... P60493 27681416
    360650 5j3c:R0 (3.04) BS02 rna ? GO:0003735 ... P60493 27681416
    360651 5j3c:R0 (3.04) BS03 MG ? GO:0003735 ... P60493 27681416
    360652 5j3c:R0 (3.04) BS04 MG ? GO:0003735 ... P60493 27681416
    360653 5j3c:R0 (3.04) BS05 MG ? GO:0003735 ... P60493 27681416
    360654 5j3c:R1 (3.04) BS01 rna ? GO:0003735 ... P60494 27681416
    360655 5j3c:R1 (3.04) BS02 MG ? GO:0003735 ... P60494 27681416
    360656 5j3c:R2 (3.04) BS01 rna ? GO:0003735 ... Q5SHP6 27681416
    360657 5j3c:R3 (3.04) BS01 rna ? GO:0003735 ... Q5SHQ6 27681416
    360658 5j3c:R3 (3.04) BS02 rna ? GO:0003735 ... Q5SHQ6 27681416
    360659 5j3c:R3 (3.04) BS03 MG ? GO:0003735 ... Q5SHQ6 27681416
    360660 5j3c:R3 (3.04) BS04 MG ? GO:0003735 ... Q5SHQ6 27681416
    360661 5j3c:R4 (3.04) BS01 rna ? GO:0003735 ... Q5SJE1 27681416
    360662 5j3c:R4 (3.04) BS02 ZN ? GO:0003735 ... Q5SJE1 27681416
    360663 5j3c:R5 (3.04) BS01 rna ? GO:0003735 ... P80339 27681416
    360664 5j3c:R5 (3.04) BS02 MG ? GO:0003735 ... P80339 27681416
    360665 5j3c:R5 (3.04) BS03 ZN ? GO:0003735 ... P80339 27681416
    360666 5j3c:R6 (3.04) BS01 rna ? GO:0000049 ... P35871 27681416
    360667 5j3c:R7 (3.04) BS01 rna ? GO:0003735 ... P80340 27681416
    360668 5j3c:R7 (3.04) BS02 MG ? GO:0003735 ... P80340 27681416
    360669 5j3c:R7 (3.04) BS03 MG ? GO:0003735 ... P80340 27681416
    360670 5j3c:R8 (3.04) BS01 rna ? GO:0003735 ... Q5SKU1 27681416
    360671 5j3c:R8 (3.04) BS02 MG ? GO:0003735 ... Q5SKU1 27681416
    360672 5j3c:R9 (3.04) BS01 rna ? GO:0003735 ... Q5SHR2 27681416
    360673 5j3c:R9 (3.04) BS02 ZN ? GO:0003735 ... Q5SHR2 27681416
    360674 5j3c:RD (3.04) BS01 rna ? GO:0002181 ... P60405 27681416
    360675 5j3c:RD (3.04) BS02 rna ? GO:0002181 ... P60405 27681416
    360676 5j3c:RD (3.04) BS03 MG ? GO:0002181 ... P60405 27681416
    360677 5j3c:RD (3.04) BS04 MG ? GO:0002181 ... P60405 27681416
    360678 5j3c:RD (3.04) BS05 MG ? GO:0002181 ... P60405 27681416
    360679 5j3c:RD (3.04) BS06 MG ? GO:0002181 ... P60405 27681416
    360680 5j3c:RD (3.04) BS07 MG ? GO:0002181 ... P60405 27681416
    360681 5j3c:RD (3.04) BS08 MG ? GO:0002181 ... P60405 27681416
    360682 5j3c:RD (3.04) BS09 MG ? GO:0002181 ... P60405 27681416
    360683 5j3c:RD (3.04) BS10 MG ? GO:0002181 ... P60405 27681416
    360684 5j3c:RE (3.04) BS01 rna ? GO:0003735 ... Q5SHN8 27681416
    360685 5j3c:RE (3.04) BS02 MG ? GO:0003735 ... Q5SHN8 27681416
    360686 5j3c:RE (3.04) BS03 MG ? GO:0003735 ... Q5SHN8 27681416
    360687 5j3c:RE (3.04) BS04 MG ? GO:0003735 ... Q5SHN8 27681416
    360688 5j3c:RF (3.04) BS01 rna ? GO:0003735 ... Q5SHN9 27681416
    360689 5j3c:RF (3.04) BS02 MG ? GO:0003735 ... Q5SHN9 27681416
    360690 5j3c:RF (3.04) BS03 MG ? GO:0003735 ... Q5SHN9 27681416
    360691 5j3c:RF (3.04) BS04 MG ? GO:0003735 ... Q5SHN9 27681416
    360692 5j3c:RF (3.04) BS05 MG ? GO:0003735 ... Q5SHN9 27681416
    360693 5j3c:RF (3.04) BS06 MG ? GO:0003735 ... Q5SHN9 27681416
    360694 5j3c:RF (3.04) BS07 MG ? GO:0003735 ... Q5SHN9 27681416
    360695 5j3c:RF (3.04) BS08 MG ? GO:0003735 ... Q5SHN9 27681416
    360696 5j3c:RF (3.04) BS09 MG ? GO:0003735 ... Q5SHN9 27681416
    360697 5j3c:RF (3.04) BS10 MG ? GO:0003735 ... Q5SHN9 27681416
    360698 5j3c:RF (3.04) BS11 MG ? GO:0003735 ... Q5SHN9 27681416
    360699 5j3c:RG (3.04) BS01 rna ? GO:0000049 ... Q5SHQ0 27681416
    360700 5j3c:RG (3.04) BS02 rna ? GO:0000049 ... Q5SHQ0 27681416
    360701 5j3c:RG (3.04) BS03 rna ? GO:0000049 ... Q5SHQ0 27681416
    360702 5j3c:RG (3.04) BS04 MG ? GO:0000049 ... Q5SHQ0 27681416
    360703 5j3c:RG (3.04) BS05 MG ? GO:0000049 ... Q5SHQ0 27681416
    360704 5j3c:RG (3.04) BS06 MG ? GO:0000049 ... Q5SHQ0 27681416
    360705 5j3c:RH (3.04) BS01 rna ? GO:0002181 ... P0DOY8 27681416
    360706 5j3c:RI (3.04) BS01 rna ? GO:0003735 ... Q5SLQ1 27681416
    360707 5j3c:RN (3.04) BS01 rna ? GO:0003729 ... P60488 27681416
    360708 5j3c:RN (3.04) BS02 MG ? GO:0003729 ... P60488 27681416
    360709 5j3c:RN (3.04) BS03 MG ? GO:0003729 ... P60488 27681416
    360710 5j3c:RO (3.04) BS01 rna ? GO:0003735 ... Q5SHP8 27681416
    360711 5j3c:RO (3.04) BS02 rna ? GO:0003735 ... Q5SHP8 27681416
    360712 5j3c:RP (3.04) BS01 rna ? GO:0003735 ... Q5SHQ7 27681416
    360713 5j3c:RP (3.04) BS02 MG ? GO:0003735 ... Q5SHQ7 27681416
    360714 5j3c:RP (3.04) BS03 MG ? GO:0003735 ... Q5SHQ7 27681416
    360715 5j3c:RQ (3.04) BS01 rna ? GO:0000049 ... P60489 27681416
    360716 5j3c:RQ (3.04) BS02 rna ? GO:0000049 ... P60489 27681416
    360717 5j3c:RQ (3.04) BS03 MG ? GO:0000049 ... P60489 27681416
    360718 5j3c:RQ (3.04) BS04 MG ? GO:0000049 ... P60489 27681416
    360719 5j3c:RQ (3.04) BS05 MG ? GO:0000049 ... P60489 27681416
    360720 5j3c:RQ (3.04) BS06 MG ? GO:0000049 ... P60489 27681416
    360721 5j3c:RR (3.04) BS01 rna ? GO:0003735 ... Q9Z9H5 27681416
    360722 5j3c:RR (3.04) BS02 MG ? GO:0003735 ... Q9Z9H5 27681416
    360723 5j3c:RR (3.04) BS03 MG ? GO:0003735 ... Q9Z9H5 27681416
    360724 5j3c:RS (3.04) BS01 rna ? GO:0003735 ... Q5SHQ4 27681416
    360725 5j3c:RS (3.04) BS02 rna ? GO:0003735 ... Q5SHQ4 27681416
    360726 5j3c:RT (3.04) BS01 rna ? GO:0003735 ... P60490 27681416
    360727 5j3c:RT (3.04) BS02 rna ? GO:0003735 ... P60490 27681416
    360728 5j3c:RU (3.04) BS01 rna ? GO:0000027 ... P60491 27681416
    360729 5j3c:RU (3.04) BS02 MG ? GO:0000027 ... P60491 27681416
    360730 5j3c:RU (3.04) BS03 MG ? GO:0000027 ... P60491 27681416
    360731 5j3c:RU (3.04) BS04 MG ? GO:0000027 ... P60491 27681416
    360732 5j3c:RU (3.04) BS05 MG ? GO:0000027 ... P60491 27681416
    360733 5j3c:RV (3.04) BS01 rna ? GO:0003723 ... P60492 27681416
    360734 5j3c:RV (3.04) BS02 MG ? GO:0003723 ... P60492 27681416
    360735 5j3c:RV (3.04) BS03 MG ? GO:0003723 ... P60492 27681416
    360736 5j3c:RV (3.04) BS04 MG ? GO:0003723 ... P60492 27681416
    360737 5j3c:RW (3.04) BS01 rna ? GO:0003735 ... Q5SHP3 27681416
    360738 5j3c:RX (3.04) BS01 rna ? GO:0003735 ... Q5SHP0 27681416
    360739 5j3c:RY (3.04) BS01 rna ? GO:0003723 ... Q5SHP9 27681416
    360740 5j3c:RY (3.04) BS02 ZN ? GO:0003723 ... Q5SHP9 27681416
    360741 5j3c:RZ (3.04) BS01 rna ? GO:0003723 ... Q5SHZ1 27681416
    360742 5j3c:RZ (3.04) BS02 rna ? GO:0003723 ... Q5SHZ1 27681416
    360743 5j3c:RZ (3.04) BS03 rna ? GO:0003723 ... Q5SHZ1 27681416
    360744 5j3c:XB (3.04) BS01 rna ? GO:0003735 ... P80371 27681416
    360745 5j3c:XC (3.04) BS01 rna ? GO:0003676 ... P80372 27681416
    360746 5j3c:XD (3.04) BS01 rna ? GO:0003723 ... P80373 27681416
    360747 5j3c:XD (3.04) BS02 SF4 ? GO:0003723 ... P80373 27681416
    360748 5j3c:XE (3.04) BS01 rna ? GO:0003723 ... Q5SHQ5 27681416
    360749 5j3c:XE (3.04) BS02 MG ? GO:0003723 ... Q5SHQ5 27681416
    360750 5j3c:XF (3.04) BS01 rna ? GO:0003735 ... Q5SLP8 27681416
    360751 5j3c:XF (3.04) BS02 MG ? GO:0003735 ... Q5SLP8 27681416
    360752 5j3c:XG (3.04) BS01 rna ? GO:0000049 ... P17291 27681416
    360753 5j3c:XH (3.04) BS01 rna ? GO:0003735 ... P0DOY9 27681416
    360754 5j3c:XI (3.04) BS01 rna ? GO:0000049 ... P80374 27681416
    360755 5j3c:XJ (3.04) BS01 rna ? GO:0000049 ... Q5SHN7 27681416
    360756 5j3c:XK (3.04) BS01 rna ? GO:0003735 ... P80376 27681416
    360757 5j3c:XL (3.04) BS01 rna ? GO:0000049 ... Q5SHN3 27681416
    360758 5j3c:XM (3.04) BS01 rna ? GO:0000049 ... P80377 27681416
    360759 5j3c:XN (3.04) BS01 rna ? GO:0003735 ... P0DOY6 27681416
    360760 5j3c:XN (3.04) BS02 ZN ? GO:0003735 ... P0DOY6 27681416
    360761 5j3c:XO (3.04) BS01 rna ? GO:0003735 ... Q5SJ76 27681416
    360762 5j3c:XO (3.04) BS02 rna ? GO:0003735 ... Q5SJ76 27681416
    360763 5j3c:XP (3.04) BS01 rna ? GO:0003735 ... Q5SJH3 27681416
    360764 5j3c:XQ (3.04) BS01 rna ? GO:0003735 ... P0DOY7 27681416
    360765 5j3c:XR (3.04) BS01 rna ? GO:0003735 ... Q5SLQ0 27681416
    360766 5j3c:XS (3.04) BS01 rna ? GO:0000028 ... Q5SHP2 27681416
    360767 5j3c:XT (3.04) BS01 rna ? GO:0003723 ... P80380 27681416
    360768 5j3c:XY (3.04) BS01 rna ? GO:0003747 ... P0A7I0 27681416
    360769 5j3c:XY (3.04) BS02 rna ? GO:0003747 ... P0A7I0 27681416
    360770 5j3c:XY (3.04) BS03 rna ? GO:0003747 ... P0A7I0 27681416
    360771 5j3c:XY (3.04) BS04 rna ? GO:0003747 ... P0A7I0 27681416
    360772 5j3c:XY (3.04) BS05 MG ? GO:0003747 ... P0A7I0 27681416
    360773 5j3c:Y0 (3.04) BS01 rna ? GO:0003735 ... P60493 27681416
    360774 5j3c:Y0 (3.04) BS02 rna ? GO:0003735 ... P60493 27681416
    360775 5j3c:Y0 (3.04) BS03 rna ? GO:0003735 ... P60493 27681416
    360776 5j3c:Y1 (3.04) BS01 rna ? GO:0003735 ... P60494 27681416
    360777 5j3c:Y2 (3.04) BS01 rna ? GO:0003735 ... Q5SHP6 27681416
    360778 5j3c:Y3 (3.04) BS01 rna ? GO:0003735 ... Q5SHQ6 27681416
    360779 5j3c:Y3 (3.04) BS02 rna ? GO:0003735 ... Q5SHQ6 27681416
    360780 5j3c:Y4 (3.04) BS01 rna ? GO:0003735 ... Q5SJE1 27681416
    360781 5j3c:Y4 (3.04) BS02 ZN ? GO:0003735 ... Q5SJE1 27681416
    360782 5j3c:Y5 (3.04) BS01 rna ? GO:0003735 ... P80339 27681416
    360783 5j3c:Y5 (3.04) BS02 MG ? GO:0003735 ... P80339 27681416
    360784 5j3c:Y5 (3.04) BS03 ZN ? GO:0003735 ... P80339 27681416
    360785 5j3c:Y6 (3.04) BS01 rna ? GO:0000049 ... P35871 27681416
    360786 5j3c:Y7 (3.04) BS01 rna ? GO:0003735 ... P80340 27681416
    360787 5j3c:Y7 (3.04) BS02 MG ? GO:0003735 ... P80340 27681416
    360788 5j3c:Y8 (3.04) BS01 rna ? GO:0003735 ... Q5SKU1 27681416
    360789 5j3c:Y9 (3.04) BS01 rna ? GO:0003735 ... Q5SHR2 27681416
    360790 5j3c:Y9 (3.04) BS02 ZN ? GO:0003735 ... Q5SHR2 27681416
    360791 5j3c:YD (3.04) BS01 rna ? GO:0002181 ... P60405 27681416
    360792 5j3c:YD (3.04) BS02 rna ? GO:0002181 ... P60405 27681416
    360793 5j3c:YD (3.04) BS03 MG ? GO:0002181 ... P60405 27681416
    360794 5j3c:YD (3.04) BS04 MG ? GO:0002181 ... P60405 27681416
    360795 5j3c:YD (3.04) BS05 MG ? GO:0002181 ... P60405 27681416
    360796 5j3c:YD (3.04) BS06 MG ? GO:0002181 ... P60405 27681416
    360797 5j3c:YD (3.04) BS07 MG ? GO:0002181 ... P60405 27681416
    360798 5j3c:YD (3.04) BS08 MG ? GO:0002181 ... P60405 27681416
    360799 5j3c:YD (3.04) BS09 MG ? GO:0002181 ... P60405 27681416
    360800 5j3c:YD (3.04) BS10 MG ? GO:0002181 ... P60405 27681416

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).