SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 1795 1796 1797 1798 1799 1800 1801 1802 1803 1804 1805 1806 1807 1808 1809 1810 1811 1812 1813 1814 1815 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    360801 5j3c:YE (3.04) BS01 rna ? GO:0003735 ... Q5SHN8 27681416
    360802 5j3c:YE (3.04) BS02 MG ? GO:0003735 ... Q5SHN8 27681416
    360803 5j3c:YE (3.04) BS03 MG ? GO:0003735 ... Q5SHN8 27681416
    360804 5j3c:YF (3.04) BS01 rna ? GO:0003735 ... Q5SHN9 27681416
    360805 5j3c:YF (3.04) BS02 MG ? GO:0003735 ... Q5SHN9 27681416
    360806 5j3c:YF (3.04) BS03 MG ? GO:0003735 ... Q5SHN9 27681416
    360807 5j3c:YF (3.04) BS04 MG ? GO:0003735 ... Q5SHN9 27681416
    360808 5j3c:YF (3.04) BS05 MG ? GO:0003735 ... Q5SHN9 27681416
    360809 5j3c:YG (3.04) BS01 rna ? GO:0000049 ... Q5SHQ0 27681416
    360810 5j3c:YG (3.04) BS02 rna ? GO:0000049 ... Q5SHQ0 27681416
    360811 5j3c:YG (3.04) BS03 rna ? GO:0000049 ... Q5SHQ0 27681416
    360812 5j3c:YG (3.04) BS04 MG ? GO:0000049 ... Q5SHQ0 27681416
    360813 5j3c:YG (3.04) BS05 MG ? GO:0000049 ... Q5SHQ0 27681416
    360814 5j3c:YH (3.04) BS01 rna ? GO:0002181 ... P0DOY8 27681416
    360815 5j3c:YI (3.04) BS01 rna ? GO:0003735 ... Q5SLQ1 27681416
    360816 5j3c:YI (3.04) BS02 rna ? GO:0003735 ... Q5SLQ1 27681416
    360817 5j3c:YI (3.04) BS03 MG ? GO:0003735 ... Q5SLQ1 27681416
    360818 5j3c:YN (3.04) BS01 rna ? GO:0003729 ... P60488 27681416
    360819 5j3c:YO (3.04) BS01 rna ? GO:0003735 ... Q5SHP8 27681416
    360820 5j3c:YO (3.04) BS02 rna ? GO:0003735 ... Q5SHP8 27681416
    360821 5j3c:YP (3.04) BS01 rna ? GO:0003735 ... Q5SHQ7 27681416
    360822 5j3c:YQ (3.04) BS01 rna ? GO:0000049 ... P60489 27681416
    360823 5j3c:YQ (3.04) BS02 rna ? GO:0000049 ... P60489 27681416
    360824 5j3c:YQ (3.04) BS03 MG ? GO:0000049 ... P60489 27681416
    360825 5j3c:YQ (3.04) BS04 MG ? GO:0000049 ... P60489 27681416
    360826 5j3c:YR (3.04) BS01 rna ? GO:0003735 ... Q9Z9H5 27681416
    360827 5j3c:YR (3.04) BS02 MG ? GO:0003735 ... Q9Z9H5 27681416
    360828 5j3c:YS (3.04) BS01 rna ? GO:0003735 ... Q5SHQ4 27681416
    360829 5j3c:YS (3.04) BS02 rna ? GO:0003735 ... Q5SHQ4 27681416
    360830 5j3c:YT (3.04) BS01 rna ? GO:0003735 ... P60490 27681416
    360831 5j3c:YT (3.04) BS02 rna ? GO:0003735 ... P60490 27681416
    360832 5j3c:YU (3.04) BS01 rna ? GO:0000027 ... P60491 27681416
    360833 5j3c:YU (3.04) BS02 MG ? GO:0000027 ... P60491 27681416
    360834 5j3c:YV (3.04) BS01 rna ? GO:0003723 ... P60492 27681416
    360835 5j3c:YV (3.04) BS02 MG ? GO:0003723 ... P60492 27681416
    360836 5j3c:YV (3.04) BS03 MG ? GO:0003723 ... P60492 27681416
    360837 5j3c:YW (3.04) BS01 rna ? GO:0003735 ... Q5SHP3 27681416
    360838 5j3c:YW (3.04) BS02 MG ? GO:0003735 ... Q5SHP3 27681416
    360839 5j3c:YW (3.04) BS03 MG ? GO:0003735 ... Q5SHP3 27681416
    360840 5j3c:YX (3.04) BS01 rna ? GO:0003735 ... Q5SHP0 27681416
    360841 5j3c:YY (3.04) BS01 rna ? GO:0003723 ... Q5SHP9 27681416
    360842 5j3c:YY (3.04) BS02 ZN ? GO:0003723 ... Q5SHP9 27681416
    360843 5j3c:YZ (3.04) BS01 rna ? GO:0003723 ... Q5SHZ1 27681416
    360844 5j3c:YZ (3.04) BS02 rna ? GO:0003723 ... Q5SHZ1 27681416
    360845 5j3c:YZ (3.04) BS03 rna ? GO:0003723 ... Q5SHZ1 27681416
    360846 5j3e:A (2.6) BS01 dna ? GO:0005515 ... Q9P016 N/A
    360847 5j3e:B (2.6) BS01 dna ? GO:0005515 ... Q9P016 N/A
    360848 5j3e:B (2.6) BS02 dna ? GO:0005515 ... Q9P016 N/A
    360849 5j3h:E (3.27) BS01 peptide 2.7.10.1 N/A P06213 27281820
    360850 5j3j:A (2.75) BS01 HL1 3.4.14.5 GO:0001618 ... P27487 N/A BindingDB: Kd=2.4nM, IC50=2.1nM
    360851 5j3j:B (2.75) BS01 HL1 3.4.14.5 GO:0001618 ... P27487 N/A BindingDB: Kd=2.4nM, IC50=2.1nM
    360852 5j3l:A (1.66) BS01 6FR ? GO:0000976 ... P9WMC1 28314097 MOAD: Kd=16uM
    BindingDB: Kd=1.6e+4nM
    360853 5j3o:A (1.47) BS01 FUC ? N/A K4LM89 N/A
    360854 5j3o:A (1.47) BS02 FUC ? N/A K4LM89 N/A
    360855 5j3o:B (1.47) BS01 FUC ? N/A K4LM89 N/A
    360856 5j3o:B (1.47) BS02 FUC ? N/A K4LM89 N/A
    360857 5j3p:A (3.1) BS01 MG 3.1.4.- GO:0003824 ... O95551 27099339
    360858 5j3p:B (3.1) BS01 MG 3.1.4.- GO:0003824 ... O95551 27099339
    360859 5j3q:A (1.87) BS01 peptide ? GO:0000184 ... Q9P805 27183195
    360860 5j3q:C (1.87) BS01 peptide ? GO:0000184 ... Q9P805 27183195
    360861 5j3r:A (2.46) BS01 FES ? GO:0000324 ... Q12438 27710937
    360862 5j3r:A (2.46) BS02 GSH ? GO:0000324 ... Q12438 27710937
    360863 5j3s:A (3.4) BS01 6FQ 3.1.4.- GO:0003824 ... O95551 27099339 BindingDB: IC50=590nM, EC50=40nM
    360864 5j3t:A (1.6) BS01 peptide ? GO:0000184 ... Q9P805 27183195
    360865 5j3t:B (1.6) BS01 peptide 3.-.-.- GO:0000184 ... O13828 27183195
    360866 5j3u:A (1.8) BS01 CMP 2.7.11.12 GO:0001932 ... A0A0F7V8B2 N/A
    360867 5j3u:A (1.8) BS02 CMP 2.7.11.12 GO:0001932 ... A0A0F7V8B2 N/A
    360868 5j3v:A (3.05) BS01 peptide ? GO:0006606 ... Q92973 27618664
    360869 5j3v:B (3.05) BS01 peptide ? GO:0006606 ... Q92973 27618664
    360870 5j3w:A (2.55) BS01 FMN ? GO:0000166 ... Q88E39 27291287
    360871 5j3w:B (2.55) BS01 FMN ? GO:0000166 ... Q88E39 27291287
    360872 5j3w:C (2.55) BS01 FMN ? GO:0000166 ... Q88E39 27291287
    360873 5j3w:D (2.55) BS01 FMN ? GO:0000166 ... Q88E39 27291287
    360874 5j3x:A (2.822) BS01 ZN 2.3.2.27 GO:0001784 ... P22681 27609087
    360875 5j3x:A (2.822) BS02 ZN 2.3.2.27 GO:0001784 ... P22681 27609087
    360876 5j3x:A (2.822) BS03 CA 2.3.2.27 GO:0001784 ... P22681 27609087
    360877 5j3x:B (2.822) BS01 ZN 2.3.2.27 GO:0001784 ... P22681 27609087
    360878 5j3x:B (2.822) BS02 ZN 2.3.2.27 GO:0001784 ... P22681 27609087
    360879 5j3x:B (2.822) BS03 CA 2.3.2.27 GO:0001784 ... P22681 27609087
    360880 5j3x:C (2.822) BS01 ZN 2.3.2.27 GO:0001784 ... P22681 27609087
    360881 5j3x:C (2.822) BS02 ZN 2.3.2.27 GO:0001784 ... P22681 27609087
    360882 5j3x:C (2.822) BS03 CA 2.3.2.27 GO:0001784 ... P22681 27609087
    360883 5j3x:D (2.822) BS01 ZN 2.3.2.27 GO:0001784 ... P22681 27609087
    360884 5j3x:D (2.822) BS02 ZN 2.3.2.27 GO:0001784 ... P22681 27609087
    360885 5j3x:D (2.822) BS03 CA 2.3.2.27 GO:0001784 ... P22681 27609087
    360886 5j3x:E (2.822) BS01 ZN 2.3.2.27 GO:0001784 ... P22681 27609087
    360887 5j3x:E (2.822) BS02 ZN 2.3.2.27 GO:0001784 ... P22681 27609087
    360888 5j3x:E (2.822) BS03 CA 2.3.2.27 GO:0001784 ... P22681 27609087
    360889 5j3x:F (2.822) BS01 ZN 2.3.2.27 GO:0001784 ... P22681 27609087
    360890 5j3x:F (2.822) BS02 ZN 2.3.2.27 GO:0001784 ... P22681 27609087
    360891 5j3x:F (2.822) BS03 CA 2.3.2.27 GO:0001784 ... P22681 27609087
    360892 5j3z:A (1.8) BS01 6FQ 3.1.4.- GO:0003824 ... Q9JJX7 27099339
    360893 5j3z:A (1.8) BS02 MG 3.1.4.- GO:0003824 ... Q9JJX7 27099339
    360894 5j3z:B (1.8) BS01 6FQ 3.1.4.- GO:0003824 ... Q9JJX7 27099339
    360895 5j3z:B (1.8) BS02 MG 3.1.4.- GO:0003824 ... Q9JJX7 27099339
    360896 5j40:A (2.17) BS01 ZN 3.6.4.- GO:0003677 ... P03072 27385654
    360897 5j41:A (1.19035) BS01 3LF 2.5.1.18 GO:0000302 ... P09211 27872191
    360898 5j41:A (1.19035) BS02 GSH 2.5.1.18 GO:0000302 ... P09211 27872191
    360899 5j41:B (1.19035) BS01 3LF 2.5.1.18 GO:0000302 ... P09211 27872191
    360900 5j41:B (1.19035) BS02 GSH 2.5.1.18 GO:0000302 ... P09211 27872191
    360901 5j42:A (1.7) BS01 6FV 3.1.4.- GO:0003824 ... Q9JJX7 27099339 BindingDB: IC50=>1.11e+5nM
    360902 5j42:A (1.7) BS02 MN 3.1.4.- GO:0003824 ... Q9JJX7 27099339
    360903 5j42:B (1.7) BS01 6FV 3.1.4.- GO:0003824 ... Q9JJX7 27099339 BindingDB: IC50=>1.11e+5nM
    360904 5j42:B (1.7) BS02 MN 3.1.4.- GO:0003824 ... Q9JJX7 27099339
    360905 5j46:A (1.95) BS01 ZN 3.5.1.88 GO:0006412 ... A0A0H3KB98 N/A
    360906 5j47:A (1.99) BS01 ZN 3.6.4.- GO:0003677 ... P03072 27385654
    360907 5j47:A (1.99) BS02 6JJ 3.6.4.- GO:0003677 ... P03072 27385654 MOAD: ic50=4.9uM
    BindingDB: IC50=4900nM
    360908 5j48:A (1.49) BS01 6FW 2.7.11.12 GO:0004692 ... Q13976 28793191
    360909 5j48:B (1.49) BS01 6FW 2.7.11.12 GO:0004692 ... Q13976 28793191
    360910 5j4b:10 (2.6) BS01 rna ? GO:0003735 ... P60493 27079977
    360911 5j4b:10 (2.6) BS02 rna ? GO:0003735 ... P60493 27079977
    360912 5j4b:10 (2.6) BS03 MG ? GO:0003735 ... P60493 27079977
    360913 5j4b:10 (2.6) BS04 MG ? GO:0003735 ... P60493 27079977
    360914 5j4b:11 (2.6) BS01 rna ? GO:0003735 ... P60494 27079977
    360915 5j4b:11 (2.6) BS02 rna ? GO:0003735 ... P60494 27079977
    360916 5j4b:11 (2.6) BS03 MG ? GO:0003735 ... P60494 27079977
    360917 5j4b:12 (2.6) BS01 rna ? GO:0003735 ... Q5SHP6 27079977
    360918 5j4b:12 (2.6) BS02 MG ? GO:0003735 ... Q5SHP6 27079977
    360919 5j4b:13 (2.6) BS01 rna ? GO:0003735 ... Q5SHQ6 27079977
    360920 5j4b:13 (2.6) BS02 rna ? GO:0003735 ... Q5SHQ6 27079977
    360921 5j4b:13 (2.6) BS03 MG ? GO:0003735 ... Q5SHQ6 27079977
    360922 5j4b:13 (2.6) BS04 MG ? GO:0003735 ... Q5SHQ6 27079977
    360923 5j4b:13 (2.6) BS05 MG ? GO:0003735 ... Q5SHQ6 27079977
    360924 5j4b:14 (2.6) BS01 rna ? GO:0003735 ... Q5SJE1 27079977
    360925 5j4b:14 (2.6) BS02 ZN ? GO:0003735 ... Q5SJE1 27079977
    360926 5j4b:15 (2.6) BS01 rna ? GO:0003735 ... P80339 27079977
    360927 5j4b:15 (2.6) BS02 MG ? GO:0003735 ... P80339 27079977
    360928 5j4b:15 (2.6) BS03 ZN ? GO:0003735 ... P80339 27079977
    360929 5j4b:16 (2.6) BS01 rna ? GO:0000049 ... P35871 27079977
    360930 5j4b:16 (2.6) BS02 MG ? GO:0000049 ... P35871 27079977
    360931 5j4b:16 (2.6) BS03 ZN ? GO:0000049 ... P35871 27079977
    360932 5j4b:16 (2.6) BS04 MG ? GO:0000049 ... P35871 27079977
    360933 5j4b:17 (2.6) BS01 rna ? GO:0003735 ... P80340 27079977
    360934 5j4b:17 (2.6) BS02 MG ? GO:0003735 ... P80340 27079977
    360935 5j4b:17 (2.6) BS03 MG ? GO:0003735 ... P80340 27079977
    360936 5j4b:18 (2.6) BS01 rna ? GO:0003735 ... Q5SKU1 27079977
    360937 5j4b:18 (2.6) BS02 MG ? GO:0003735 ... Q5SKU1 27079977
    360938 5j4b:18 (2.6) BS03 MG ? GO:0003735 ... Q5SKU1 27079977
    360939 5j4b:19 (2.6) BS01 rna ? GO:0003735 ... Q5SHR2 27079977
    360940 5j4b:19 (2.6) BS02 ZN ? GO:0003735 ... Q5SHR2 27079977
    360941 5j4b:1D (2.6) BS01 rna ? GO:0002181 ... P60405 27079977
    360942 5j4b:1D (2.6) BS02 rna ? GO:0002181 ... P60405 27079977
    360943 5j4b:1D (2.6) BS03 MG ? GO:0002181 ... P60405 27079977
    360944 5j4b:1D (2.6) BS04 MG ? GO:0002181 ... P60405 27079977
    360945 5j4b:1D (2.6) BS05 MG ? GO:0002181 ... P60405 27079977
    360946 5j4b:1D (2.6) BS06 MG ? GO:0002181 ... P60405 27079977
    360947 5j4b:1D (2.6) BS07 MG ? GO:0002181 ... P60405 27079977
    360948 5j4b:1D (2.6) BS08 MG ? GO:0002181 ... P60405 27079977
    360949 5j4b:1D (2.6) BS09 MG ? GO:0002181 ... P60405 27079977
    360950 5j4b:1D (2.6) BS10 MG ? GO:0002181 ... P60405 27079977
    360951 5j4b:1D (2.6) BS11 MG ? GO:0002181 ... P60405 27079977
    360952 5j4b:1D (2.6) BS12 MG ? GO:0002181 ... P60405 27079977
    360953 5j4b:1E (2.6) BS01 rna ? GO:0003735 ... Q5SHN8 27079977
    360954 5j4b:1E (2.6) BS02 MG ? GO:0003735 ... Q5SHN8 27079977
    360955 5j4b:1E (2.6) BS03 MG ? GO:0003735 ... Q5SHN8 27079977
    360956 5j4b:1E (2.6) BS04 MG ? GO:0003735 ... Q5SHN8 27079977
    360957 5j4b:1E (2.6) BS05 MG ? GO:0003735 ... Q5SHN8 27079977
    360958 5j4b:1E (2.6) BS06 MG ? GO:0003735 ... Q5SHN8 27079977
    360959 5j4b:1F (2.6) BS01 rna ? GO:0003735 ... Q5SHN9 27079977
    360960 5j4b:1F (2.6) BS02 MG ? GO:0003735 ... Q5SHN9 27079977
    360961 5j4b:1F (2.6) BS03 MG ? GO:0003735 ... Q5SHN9 27079977
    360962 5j4b:1F (2.6) BS04 MG ? GO:0003735 ... Q5SHN9 27079977
    360963 5j4b:1F (2.6) BS05 MG ? GO:0003735 ... Q5SHN9 27079977
    360964 5j4b:1F (2.6) BS06 MG ? GO:0003735 ... Q5SHN9 27079977
    360965 5j4b:1F (2.6) BS07 MG ? GO:0003735 ... Q5SHN9 27079977
    360966 5j4b:1F (2.6) BS08 MG ? GO:0003735 ... Q5SHN9 27079977
    360967 5j4b:1F (2.6) BS09 MG ? GO:0003735 ... Q5SHN9 27079977
    360968 5j4b:1F (2.6) BS10 MG ? GO:0003735 ... Q5SHN9 27079977
    360969 5j4b:1F (2.6) BS11 MG ? GO:0003735 ... Q5SHN9 27079977
    360970 5j4b:1F (2.6) BS12 MG ? GO:0003735 ... Q5SHN9 27079977
    360971 5j4b:1F (2.6) BS13 MG ? GO:0003735 ... Q5SHN9 27079977
    360972 5j4b:1G (2.6) BS01 rna ? GO:0000049 ... Q5SHQ0 27079977
    360973 5j4b:1G (2.6) BS02 rna ? GO:0000049 ... Q5SHQ0 27079977
    360974 5j4b:1G (2.6) BS03 rna ? GO:0000049 ... Q5SHQ0 27079977
    360975 5j4b:1G (2.6) BS04 MG ? GO:0000049 ... Q5SHQ0 27079977
    360976 5j4b:1H (2.6) BS01 rna N/A GO:0003735 ... N/A 27079977
    360977 5j4b:1I (2.6) BS01 rna ? GO:0003735 ... Q5SLQ1 27079977
    360978 5j4b:1I (2.6) BS02 MG ? GO:0003735 ... Q5SLQ1 27079977
    360979 5j4b:1N (2.6) BS01 rna ? GO:0003729 ... P60488 27079977
    360980 5j4b:1N (2.6) BS02 MG ? GO:0003729 ... P60488 27079977
    360981 5j4b:1N (2.6) BS03 MG ? GO:0003729 ... P60488 27079977
    360982 5j4b:1N (2.6) BS04 MG ? GO:0003729 ... P60488 27079977
    360983 5j4b:1O (2.6) BS01 rna ? GO:0003735 ... Q5SHP8 27079977
    360984 5j4b:1O (2.6) BS02 rna ? GO:0003735 ... Q5SHP8 27079977
    360985 5j4b:1O (2.6) BS03 MG ? GO:0003735 ... Q5SHP8 27079977
    360986 5j4b:1O (2.6) BS04 MG ? GO:0003735 ... Q5SHP8 27079977
    360987 5j4b:1P (2.6) BS01 rna ? GO:0003735 ... Q5SHQ7 27079977
    360988 5j4b:1P (2.6) BS02 MG ? GO:0003735 ... Q5SHQ7 27079977
    360989 5j4b:1P (2.6) BS03 MG ? GO:0003735 ... Q5SHQ7 27079977
    360990 5j4b:1P (2.6) BS04 MG ? GO:0003735 ... Q5SHQ7 27079977
    360991 5j4b:1P (2.6) BS05 MG ? GO:0003735 ... Q5SHQ7 27079977
    360992 5j4b:1Q (2.6) BS01 rna ? GO:0000049 ... P60489 27079977
    360993 5j4b:1Q (2.6) BS02 rna ? GO:0000049 ... P60489 27079977
    360994 5j4b:1Q (2.6) BS03 rna ? GO:0000049 ... P60489 27079977
    360995 5j4b:1Q (2.6) BS04 MG ? GO:0000049 ... P60489 27079977
    360996 5j4b:1Q (2.6) BS05 MG ? GO:0000049 ... P60489 27079977
    360997 5j4b:1Q (2.6) BS06 MG ? GO:0000049 ... P60489 27079977
    360998 5j4b:1Q (2.6) BS07 MG ? GO:0000049 ... P60489 27079977
    360999 5j4b:1R (2.6) BS01 rna ? GO:0003735 ... Q9Z9H5 27079977
    361000 5j4b:1R (2.6) BS02 MG ? GO:0003735 ... Q9Z9H5 27079977

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).