SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    361001 5j4b:1R (2.6) BS03 MG ? GO:0003735 ... Q9Z9H5 27079977
    361002 5j4b:1R (2.6) BS04 MG ? GO:0003735 ... Q9Z9H5 27079977
    361003 5j4b:1S (2.6) BS01 rna ? GO:0003735 ... Q5SHQ4 27079977
    361004 5j4b:1S (2.6) BS02 rna ? GO:0003735 ... Q5SHQ4 27079977
    361005 5j4b:1S (2.6) BS03 MG ? GO:0003735 ... Q5SHQ4 27079977
    361006 5j4b:1S (2.6) BS04 MG ? GO:0003735 ... Q5SHQ4 27079977
    361007 5j4b:1T (2.6) BS01 rna ? GO:0003735 ... P60490 27079977
    361008 5j4b:1T (2.6) BS02 rna ? GO:0003735 ... P60490 27079977
    361009 5j4b:1U (2.6) BS01 rna ? GO:0000027 ... P60491 27079977
    361010 5j4b:1U (2.6) BS02 MG ? GO:0000027 ... P60491 27079977
    361011 5j4b:1U (2.6) BS03 MG ? GO:0000027 ... P60491 27079977
    361012 5j4b:1U (2.6) BS04 MG ? GO:0000027 ... P60491 27079977
    361013 5j4b:1U (2.6) BS05 MG ? GO:0000027 ... P60491 27079977
    361014 5j4b:1U (2.6) BS06 MG ? GO:0000027 ... P60491 27079977
    361015 5j4b:1U (2.6) BS07 MG ? GO:0000027 ... P60491 27079977
    361016 5j4b:1U (2.6) BS08 MG ? GO:0000027 ... P60491 27079977
    361017 5j4b:1U (2.6) BS09 MG ? GO:0000027 ... P60491 27079977
    361018 5j4b:1V (2.6) BS01 rna ? GO:0003723 ... P60492 27079977
    361019 5j4b:1V (2.6) BS02 MG ? GO:0003723 ... P60492 27079977
    361020 5j4b:1V (2.6) BS03 MG ? GO:0003723 ... P60492 27079977
    361021 5j4b:1V (2.6) BS04 MG ? GO:0003723 ... P60492 27079977
    361022 5j4b:1V (2.6) BS05 MG ? GO:0003723 ... P60492 27079977
    361023 5j4b:1V (2.6) BS06 MG ? GO:0003723 ... P60492 27079977
    361024 5j4b:1W (2.6) BS01 rna ? GO:0003735 ... Q5SHP3 27079977
    361025 5j4b:1W (2.6) BS02 MG ? GO:0003735 ... Q5SHP3 27079977
    361026 5j4b:1W (2.6) BS03 MG ? GO:0003735 ... Q5SHP3 27079977
    361027 5j4b:1W (2.6) BS04 MG ? GO:0003735 ... Q5SHP3 27079977
    361028 5j4b:1W (2.6) BS05 MG ? GO:0003735 ... Q5SHP3 27079977
    361029 5j4b:1W (2.6) BS06 MG ? GO:0003735 ... Q5SHP3 27079977
    361030 5j4b:1X (2.6) BS01 rna ? GO:0003735 ... Q5SHP0 27079977
    361031 5j4b:1X (2.6) BS02 MG ? GO:0003735 ... Q5SHP0 27079977
    361032 5j4b:1X (2.6) BS03 MG ? GO:0003735 ... Q5SHP0 27079977
    361033 5j4b:1X (2.6) BS04 MG ? GO:0003735 ... Q5SHP0 27079977
    361034 5j4b:1X (2.6) BS05 MG ? GO:0003735 ... Q5SHP0 27079977
    361035 5j4b:1X (2.6) BS06 MG ? GO:0003735 ... Q5SHP0 27079977
    361036 5j4b:1Y (2.6) BS01 rna ? GO:0003723 ... Q5SHP9 27079977
    361037 5j4b:1Y (2.6) BS02 ZN ? GO:0003723 ... Q5SHP9 27079977
    361038 5j4b:1Y (2.6) BS03 MG ? GO:0003723 ... Q5SHP9 27079977
    361039 5j4b:1Z (2.6) BS01 rna ? GO:0003723 ... Q5SHZ1 27079977
    361040 5j4b:1Z (2.6) BS02 rna ? GO:0003723 ... Q5SHZ1 27079977
    361041 5j4b:1Z (2.6) BS03 MG ? GO:0003723 ... Q5SHZ1 27079977
    361042 5j4b:1b (2.6) BS01 rna ? GO:0003735 ... P80371 27079977
    361043 5j4b:1b (2.6) BS02 MG ? GO:0003735 ... P80371 27079977
    361044 5j4b:1c (2.6) BS01 rna ? GO:0003676 ... P80372 27079977
    361045 5j4b:1d (2.6) BS01 rna ? GO:0003723 ... P80373 27079977
    361046 5j4b:1d (2.6) BS02 SF4 ? GO:0003723 ... P80373 27079977
    361047 5j4b:1e (2.6) BS01 rna ? GO:0003723 ... Q5SHQ5 27079977
    361048 5j4b:1e (2.6) BS02 MG ? GO:0003723 ... Q5SHQ5 27079977
    361049 5j4b:1e (2.6) BS03 MG ? GO:0003723 ... Q5SHQ5 27079977
    361050 5j4b:1f (2.6) BS01 rna ? GO:0003735 ... Q5SLP8 27079977
    361051 5j4b:1f (2.6) BS02 MG ? GO:0003735 ... Q5SLP8 27079977
    361052 5j4b:1g (2.6) BS01 rna ? GO:0000049 ... P17291 27079977
    361053 5j4b:1g (2.6) BS02 rna ? GO:0000049 ... P17291 27079977
    361054 5j4b:1h (2.6) BS01 rna N/A GO:0003735 ... N/A 27079977
    361055 5j4b:1i (2.6) BS01 rna ? GO:0000049 ... P80374 27079977
    361056 5j4b:1i (2.6) BS02 rna ? GO:0000049 ... P80374 27079977
    361057 5j4b:1j (2.6) BS01 rna ? GO:0000049 ... Q5SHN7 27079977
    361058 5j4b:1k (2.6) BS01 rna ? GO:0003735 ... P80376 27079977
    361059 5j4b:1k (2.6) BS02 MG ? GO:0003735 ... P80376 27079977
    361060 5j4b:1l (2.6) BS01 rna ? GO:0000049 ... Q5SHN3 27079977
    361061 5j4b:1l (2.6) BS02 MG ? GO:0000049 ... Q5SHN3 27079977
    361062 5j4b:1m (2.6) BS01 rna ? GO:0000049 ... P80377 27079977
    361063 5j4b:1m (2.6) BS02 rna ? GO:0000049 ... P80377 27079977
    361064 5j4b:1m (2.6) BS03 MG ? GO:0000049 ... P80377 27079977
    361065 5j4b:1n (2.6) BS01 rna N/A GO:0003735 ... N/A 27079977
    361066 5j4b:1n (2.6) BS02 ZN N/A GO:0003735 ... N/A 27079977
    361067 5j4b:1o (2.6) BS01 rna ? GO:0003735 ... Q5SJ76 27079977
    361068 5j4b:1o (2.6) BS02 rna ? GO:0003735 ... Q5SJ76 27079977
    361069 5j4b:1p (2.6) BS01 rna ? GO:0003735 ... Q5SJH3 27079977
    361070 5j4b:1q (2.6) BS01 rna N/A GO:0003735 ... N/A 27079977
    361071 5j4b:1r (2.6) BS01 rna ? GO:0003735 ... Q5SLQ0 27079977
    361072 5j4b:1s (2.6) BS01 rna ? GO:0000028 ... Q5SHP2 27079977
    361073 5j4b:1t (2.6) BS01 rna ? GO:0003723 ... P80380 27079977
    361074 5j4b:1t (2.6) BS02 MG ? GO:0003723 ... P80380 27079977
    361075 5j4b:20 (2.6) BS01 rna ? GO:0003735 ... P60493 27079977
    361076 5j4b:20 (2.6) BS02 rna ? GO:0003735 ... P60493 27079977
    361077 5j4b:20 (2.6) BS03 rna ? GO:0003735 ... P60493 27079977
    361078 5j4b:21 (2.6) BS01 rna ? GO:0003735 ... P60494 27079977
    361079 5j4b:21 (2.6) BS02 rna ? GO:0003735 ... P60494 27079977
    361080 5j4b:21 (2.6) BS03 MG ? GO:0003735 ... P60494 27079977
    361081 5j4b:22 (2.6) BS01 rna ? GO:0003735 ... Q5SHP6 27079977
    361082 5j4b:23 (2.6) BS01 rna ? GO:0003735 ... Q5SHQ6 27079977
    361083 5j4b:23 (2.6) BS02 rna ? GO:0003735 ... Q5SHQ6 27079977
    361084 5j4b:23 (2.6) BS03 MG ? GO:0003735 ... Q5SHQ6 27079977
    361085 5j4b:23 (2.6) BS04 MG ? GO:0003735 ... Q5SHQ6 27079977
    361086 5j4b:24 (2.6) BS01 rna ? GO:0003735 ... Q5SJE1 27079977
    361087 5j4b:24 (2.6) BS02 ZN ? GO:0003735 ... Q5SJE1 27079977
    361088 5j4b:25 (2.6) BS01 rna ? GO:0003735 ... P80339 27079977
    361089 5j4b:25 (2.6) BS02 ZN ? GO:0003735 ... P80339 27079977
    361090 5j4b:26 (2.6) BS01 rna ? GO:0000049 ... P35871 27079977
    361091 5j4b:26 (2.6) BS02 ZN ? GO:0000049 ... P35871 27079977
    361092 5j4b:27 (2.6) BS01 rna ? GO:0003735 ... P80340 27079977
    361093 5j4b:28 (2.6) BS01 rna ? GO:0003735 ... Q5SKU1 27079977
    361094 5j4b:29 (2.6) BS01 rna ? GO:0003735 ... Q5SHR2 27079977
    361095 5j4b:29 (2.6) BS02 ZN ? GO:0003735 ... Q5SHR2 27079977
    361096 5j4b:2D (2.6) BS01 rna ? GO:0002181 ... P60405 27079977
    361097 5j4b:2D (2.6) BS02 rna ? GO:0002181 ... P60405 27079977
    361098 5j4b:2D (2.6) BS03 MG ? GO:0002181 ... P60405 27079977
    361099 5j4b:2D (2.6) BS04 MG ? GO:0002181 ... P60405 27079977
    361100 5j4b:2D (2.6) BS05 MG ? GO:0002181 ... P60405 27079977
    361101 5j4b:2D (2.6) BS06 MG ? GO:0002181 ... P60405 27079977
    361102 5j4b:2D (2.6) BS07 MG ? GO:0002181 ... P60405 27079977
    361103 5j4b:2E (2.6) BS01 rna ? GO:0003735 ... Q5SHN8 27079977
    361104 5j4b:2F (2.6) BS01 rna ? GO:0003735 ... Q5SHN9 27079977
    361105 5j4b:2F (2.6) BS02 MG ? GO:0003735 ... Q5SHN9 27079977
    361106 5j4b:2F (2.6) BS03 MG ? GO:0003735 ... Q5SHN9 27079977
    361107 5j4b:2F (2.6) BS04 MG ? GO:0003735 ... Q5SHN9 27079977
    361108 5j4b:2F (2.6) BS05 MG ? GO:0003735 ... Q5SHN9 27079977
    361109 5j4b:2G (2.6) BS01 rna ? GO:0000049 ... Q5SHQ0 27079977
    361110 5j4b:2G (2.6) BS02 rna ? GO:0000049 ... Q5SHQ0 27079977
    361111 5j4b:2G (2.6) BS03 rna ? GO:0000049 ... Q5SHQ0 27079977
    361112 5j4b:2H (2.6) BS01 rna N/A GO:0003735 ... N/A 27079977
    361113 5j4b:2I (2.6) BS01 rna ? GO:0003735 ... Q5SLQ1 27079977
    361114 5j4b:2N (2.6) BS01 rna ? GO:0003729 ... P60488 27079977
    361115 5j4b:2O (2.6) BS01 rna ? GO:0003735 ... Q5SHP8 27079977
    361116 5j4b:2O (2.6) BS02 rna ? GO:0003735 ... Q5SHP8 27079977
    361117 5j4b:2P (2.6) BS01 rna ? GO:0003735 ... Q5SHQ7 27079977
    361118 5j4b:2Q (2.6) BS01 rna ? GO:0000049 ... P60489 27079977
    361119 5j4b:2Q (2.6) BS02 rna ? GO:0000049 ... P60489 27079977
    361120 5j4b:2Q (2.6) BS03 MG ? GO:0000049 ... P60489 27079977
    361121 5j4b:2Q (2.6) BS04 MG ? GO:0000049 ... P60489 27079977
    361122 5j4b:2Q (2.6) BS05 MG ? GO:0000049 ... P60489 27079977
    361123 5j4b:2R (2.6) BS01 rna ? GO:0003735 ... Q9Z9H5 27079977
    361124 5j4b:2S (2.6) BS01 rna ? GO:0003735 ... Q5SHQ4 27079977
    361125 5j4b:2S (2.6) BS02 rna ? GO:0003735 ... Q5SHQ4 27079977
    361126 5j4b:2T (2.6) BS01 rna ? GO:0003735 ... P60490 27079977
    361127 5j4b:2T (2.6) BS02 rna ? GO:0003735 ... P60490 27079977
    361128 5j4b:2U (2.6) BS01 rna ? GO:0000027 ... P60491 27079977
    361129 5j4b:2U (2.6) BS02 MG ? GO:0000027 ... P60491 27079977
    361130 5j4b:2U (2.6) BS03 MG ? GO:0000027 ... P60491 27079977
    361131 5j4b:2U (2.6) BS04 MG ? GO:0000027 ... P60491 27079977
    361132 5j4b:2V (2.6) BS01 rna ? GO:0003723 ... P60492 27079977
    361133 5j4b:2V (2.6) BS02 MG ? GO:0003723 ... P60492 27079977
    361134 5j4b:2V (2.6) BS03 MG ? GO:0003723 ... P60492 27079977
    361135 5j4b:2W (2.6) BS01 rna ? GO:0003735 ... Q5SHP3 27079977
    361136 5j4b:2W (2.6) BS02 MG ? GO:0003735 ... Q5SHP3 27079977
    361137 5j4b:2W (2.6) BS03 MG ? GO:0003735 ... Q5SHP3 27079977
    361138 5j4b:2X (2.6) BS01 rna ? GO:0003735 ... Q5SHP0 27079977
    361139 5j4b:2X (2.6) BS02 MG ? GO:0003735 ... Q5SHP0 27079977
    361140 5j4b:2Y (2.6) BS01 rna ? GO:0003723 ... Q5SHP9 27079977
    361141 5j4b:2Y (2.6) BS02 ZN ? GO:0003723 ... Q5SHP9 27079977
    361142 5j4b:2Z (2.6) BS01 rna ? GO:0003723 ... Q5SHZ1 27079977
    361143 5j4b:2Z (2.6) BS02 rna ? GO:0003723 ... Q5SHZ1 27079977
    361144 5j4b:2Z (2.6) BS03 MG ? GO:0003723 ... Q5SHZ1 27079977
    361145 5j4b:2b (2.6) BS01 rna ? GO:0003735 ... P80371 27079977
    361146 5j4b:2c (2.6) BS01 rna ? GO:0003676 ... P80372 27079977
    361147 5j4b:2d (2.6) BS01 rna ? GO:0003723 ... P80373 27079977
    361148 5j4b:2d (2.6) BS02 SF4 ? GO:0003723 ... P80373 27079977
    361149 5j4b:2d (2.6) BS03 MG ? GO:0003723 ... P80373 27079977
    361150 5j4b:2e (2.6) BS01 rna ? GO:0003723 ... Q5SHQ5 27079977
    361151 5j4b:2e (2.6) BS02 MG ? GO:0003723 ... Q5SHQ5 27079977
    361152 5j4b:2f (2.6) BS01 rna ? GO:0003735 ... Q5SLP8 27079977
    361153 5j4b:2f (2.6) BS02 MG ? GO:0003735 ... Q5SLP8 27079977
    361154 5j4b:2g (2.6) BS01 rna ? GO:0000049 ... P17291 27079977
    361155 5j4b:2g (2.6) BS02 rna ? GO:0000049 ... P17291 27079977
    361156 5j4b:2h (2.6) BS01 rna N/A GO:0003735 ... N/A 27079977
    361157 5j4b:2i (2.6) BS01 rna ? GO:0000049 ... P80374 27079977
    361158 5j4b:2i (2.6) BS02 rna ? GO:0000049 ... P80374 27079977
    361159 5j4b:2j (2.6) BS01 rna ? GO:0000049 ... Q5SHN7 27079977
    361160 5j4b:2k (2.6) BS01 rna ? GO:0003735 ... P80376 27079977
    361161 5j4b:2k (2.6) BS02 MG ? GO:0003735 ... P80376 27079977
    361162 5j4b:2l (2.6) BS01 rna ? GO:0000049 ... Q5SHN3 27079977
    361163 5j4b:2l (2.6) BS02 rna ? GO:0000049 ... Q5SHN3 27079977
    361164 5j4b:2l (2.6) BS03 MG ? GO:0000049 ... Q5SHN3 27079977
    361165 5j4b:2m (2.6) BS01 rna ? GO:0000049 ... P80377 27079977
    361166 5j4b:2n (2.6) BS01 rna N/A GO:0003735 ... N/A 27079977
    361167 5j4b:2n (2.6) BS02 ZN N/A GO:0003735 ... N/A 27079977
    361168 5j4b:2o (2.6) BS01 rna ? GO:0003735 ... Q5SJ76 27079977
    361169 5j4b:2o (2.6) BS02 rna ? GO:0003735 ... Q5SJ76 27079977
    361170 5j4b:2p (2.6) BS01 rna ? GO:0003735 ... Q5SJH3 27079977
    361171 5j4b:2q (2.6) BS01 rna N/A GO:0003735 ... N/A 27079977
    361172 5j4b:2q (2.6) BS02 MG N/A GO:0003735 ... N/A 27079977
    361173 5j4b:2q (2.6) BS03 MG N/A GO:0003735 ... N/A 27079977
    361174 5j4b:2r (2.6) BS01 rna ? GO:0003735 ... Q5SLQ0 27079977
    361175 5j4b:2s (2.6) BS01 rna ? GO:0000028 ... Q5SHP2 27079977
    361176 5j4b:2t (2.6) BS01 rna ? GO:0003723 ... P80380 27079977
    361177 5j4b:2t (2.6) BS02 MG ? GO:0003723 ... P80380 27079977
    361178 5j4c:10 (2.8) BS01 rna ? GO:0003735 ... P60493 27079977
    361179 5j4c:10 (2.8) BS02 rna ? GO:0003735 ... P60493 27079977
    361180 5j4c:10 (2.8) BS03 MG ? GO:0003735 ... P60493 27079977
    361181 5j4c:10 (2.8) BS04 MG ? GO:0003735 ... P60493 27079977
    361182 5j4c:11 (2.8) BS01 rna ? GO:0003735 ... P60494 27079977
    361183 5j4c:11 (2.8) BS02 rna ? GO:0003735 ... P60494 27079977
    361184 5j4c:11 (2.8) BS03 MG ? GO:0003735 ... P60494 27079977
    361185 5j4c:12 (2.8) BS01 rna ? GO:0003735 ... Q5SHP6 27079977
    361186 5j4c:12 (2.8) BS02 MG ? GO:0003735 ... Q5SHP6 27079977
    361187 5j4c:13 (2.8) BS01 rna ? GO:0003735 ... Q5SHQ6 27079977
    361188 5j4c:13 (2.8) BS02 rna ? GO:0003735 ... Q5SHQ6 27079977
    361189 5j4c:13 (2.8) BS03 MG ? GO:0003735 ... Q5SHQ6 27079977
    361190 5j4c:13 (2.8) BS04 MG ? GO:0003735 ... Q5SHQ6 27079977
    361191 5j4c:14 (2.8) BS01 rna ? GO:0003735 ... Q5SJE1 27079977
    361192 5j4c:14 (2.8) BS02 ZN ? GO:0003735 ... Q5SJE1 27079977
    361193 5j4c:15 (2.8) BS01 rna ? GO:0003735 ... P80339 27079977
    361194 5j4c:15 (2.8) BS02 MG ? GO:0003735 ... P80339 27079977
    361195 5j4c:15 (2.8) BS03 ZN ? GO:0003735 ... P80339 27079977
    361196 5j4c:16 (2.8) BS01 rna ? GO:0000049 ... P35871 27079977
    361197 5j4c:16 (2.8) BS02 MG ? GO:0000049 ... P35871 27079977
    361198 5j4c:16 (2.8) BS03 ZN ? GO:0000049 ... P35871 27079977
    361199 5j4c:16 (2.8) BS04 MG ? GO:0000049 ... P35871 27079977
    361200 5j4c:17 (2.8) BS01 rna ? GO:0003735 ... P80340 27079977

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).