SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 1798 1799 1800 1801 1802 1803 1804 1805 1806 1807 1808 1809 1810 1811 1812 1813 1814 1815 1816 1817 1818 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    361401 5j4c:2X (2.8) BS01 rna ? GO:0003735 ... Q5SHP0 27079977
    361402 5j4c:2X (2.8) BS02 MG ? GO:0003735 ... Q5SHP0 27079977
    361403 5j4c:2Y (2.8) BS01 rna ? GO:0003723 ... Q5SHP9 27079977
    361404 5j4c:2Y (2.8) BS02 ZN ? GO:0003723 ... Q5SHP9 27079977
    361405 5j4c:2Z (2.8) BS01 rna ? GO:0003723 ... Q5SHZ1 27079977
    361406 5j4c:2Z (2.8) BS02 rna ? GO:0003723 ... Q5SHZ1 27079977
    361407 5j4c:2Z (2.8) BS03 MG ? GO:0003723 ... Q5SHZ1 27079977
    361408 5j4c:2b (2.8) BS01 rna ? GO:0003735 ... P80371 27079977
    361409 5j4c:2c (2.8) BS01 rna ? GO:0003676 ... P80372 27079977
    361410 5j4c:2d (2.8) BS01 rna ? GO:0003723 ... P80373 27079977
    361411 5j4c:2d (2.8) BS02 SF4 ? GO:0003723 ... P80373 27079977
    361412 5j4c:2d (2.8) BS03 MG ? GO:0003723 ... P80373 27079977
    361413 5j4c:2e (2.8) BS01 rna ? GO:0003723 ... Q5SHQ5 27079977
    361414 5j4c:2e (2.8) BS02 MG ? GO:0003723 ... Q5SHQ5 27079977
    361415 5j4c:2f (2.8) BS01 rna ? GO:0003735 ... Q5SLP8 27079977
    361416 5j4c:2f (2.8) BS02 MG ? GO:0003735 ... Q5SLP8 27079977
    361417 5j4c:2g (2.8) BS01 rna ? GO:0000049 ... P17291 27079977
    361418 5j4c:2g (2.8) BS02 rna ? GO:0000049 ... P17291 27079977
    361419 5j4c:2h (2.8) BS01 rna N/A GO:0003735 ... N/A 27079977
    361420 5j4c:2i (2.8) BS01 rna ? GO:0000049 ... P80374 27079977
    361421 5j4c:2i (2.8) BS02 rna ? GO:0000049 ... P80374 27079977
    361422 5j4c:2j (2.8) BS01 rna ? GO:0000049 ... Q5SHN7 27079977
    361423 5j4c:2k (2.8) BS01 rna ? GO:0003735 ... P80376 27079977
    361424 5j4c:2k (2.8) BS02 MG ? GO:0003735 ... P80376 27079977
    361425 5j4c:2l (2.8) BS01 rna ? GO:0000049 ... Q5SHN3 27079977
    361426 5j4c:2l (2.8) BS02 MG ? GO:0000049 ... Q5SHN3 27079977
    361427 5j4c:2m (2.8) BS01 rna ? GO:0000049 ... P80377 27079977
    361428 5j4c:2m (2.8) BS02 rna ? GO:0000049 ... P80377 27079977
    361429 5j4c:2n (2.8) BS01 rna N/A GO:0003735 ... N/A 27079977
    361430 5j4c:2n (2.8) BS02 ZN N/A GO:0003735 ... N/A 27079977
    361431 5j4c:2o (2.8) BS01 rna ? GO:0003735 ... Q5SJ76 27079977
    361432 5j4c:2o (2.8) BS02 rna ? GO:0003735 ... Q5SJ76 27079977
    361433 5j4c:2p (2.8) BS01 rna ? GO:0003735 ... Q5SJH3 27079977
    361434 5j4c:2q (2.8) BS01 rna N/A GO:0003735 ... N/A 27079977
    361435 5j4c:2q (2.8) BS02 MG N/A GO:0003735 ... N/A 27079977
    361436 5j4c:2q (2.8) BS03 MG N/A GO:0003735 ... N/A 27079977
    361437 5j4c:2r (2.8) BS01 rna ? GO:0003735 ... Q5SLQ0 27079977
    361438 5j4c:2s (2.8) BS01 rna ? GO:0000028 ... Q5SHP2 27079977
    361439 5j4c:2t (2.8) BS01 rna ? GO:0003723 ... P80380 27079977
    361440 5j4c:2t (2.8) BS02 MG ? GO:0003723 ... P80380 27079977
    361441 5j4d:AA (3.1) BS01 rna ? GO:0003735 ... Q72I22 27107638
    361442 5j4d:AA (3.1) BS02 rna ? GO:0003735 ... Q72I22 27107638
    361443 5j4d:AB (3.1) BS01 rna ? GO:0003735 ... P62659 27107638
    361444 5j4d:AC (3.1) BS01 rna ? GO:0003723 ... Q72I15 27107638
    361445 5j4d:AC (3.1) BS02 ZN ? GO:0003723 ... Q72I15 27107638
    361446 5j4d:AD (3.1) BS01 rna ? GO:0000049 ... P62655 27107638
    361447 5j4d:AD (3.1) BS02 rna ? GO:0000049 ... P62655 27107638
    361448 5j4d:BA (3.1) BS01 rna ? GO:0003735 ... Q72JR0 27107638
    361449 5j4d:BB (3.1) BS01 rna ? GO:0000028 ... P62660 27107638
    361450 5j4d:BB (3.1) BS02 MG ? GO:0000028 ... P62660 27107638
    361451 5j4d:BC (3.1) BS01 rna ? GO:0003723 ... Q72IA7 27107638
    361452 5j4d:BC (3.1) BS02 rna ? GO:0003723 ... Q72IA7 27107638
    361453 5j4d:BC (3.1) BS03 MG ? GO:0003723 ... Q72IA7 27107638
    361454 5j4d:BC (3.1) BS04 MG ? GO:0003723 ... Q72IA7 27107638
    361455 5j4d:BC (3.1) BS05 MG ? GO:0003723 ... Q72IA7 27107638
    361456 5j4d:BD (3.1) BS01 rna ? GO:0003735 ... P62656 27107638
    361457 5j4d:CA (3.1) BS01 rna ? GO:0003735 ... P62652 27107638
    361458 5j4d:CA (3.1) BS02 ZN ? GO:0003735 ... P62652 27107638
    361459 5j4d:CB (3.1) BS01 rna ? GO:0003723 ... P62661 27107638
    361460 5j4d:CC (3.1) BS01 rna ? GO:0003735 ... P60493 27107638
    361461 5j4d:CC (3.1) BS02 rna ? GO:0003735 ... P60493 27107638
    361462 5j4d:CC (3.1) BS03 rna ? GO:0003735 ... P60493 27107638
    361463 5j4d:CD (3.1) BS01 rna ? GO:0003735 ... P62657 27107638
    361464 5j4d:CD (3.1) BS02 rna ? GO:0003735 ... P62657 27107638
    361465 5j4d:CD (3.1) BS03 MG ? GO:0003735 ... P62657 27107638
    361466 5j4d:DA (3.1) BS01 rna ? GO:0003735 ... Q72GW3 27107638
    361467 5j4d:DA (3.1) BS02 ZN ? GO:0003735 ... Q72GW3 27107638
    361468 5j4d:DA (3.1) BS03 MG ? GO:0003735 ... Q72GW3 27107638
    361469 5j4d:DC (3.1) BS01 rna ? GO:0003735 ... Q72G84 27107638
    361470 5j4d:DC (3.1) BS02 rna ? GO:0003735 ... Q72G84 27107638
    361471 5j4d:DC (3.1) BS03 MG ? GO:0003735 ... Q72G84 27107638
    361472 5j4d:DD (3.1) BS01 rna ? GO:0003735 ... P62238 27107638
    361473 5j4d:E (3.1) BS01 rna ? GO:0002181 ... Q72I07 27107638
    361474 5j4d:E (3.1) BS02 MG ? GO:0002181 ... Q72I07 27107638
    361475 5j4d:E (3.1) BS03 MG ? GO:0002181 ... Q72I07 27107638
    361476 5j4d:E (3.1) BS04 MG ? GO:0002181 ... Q72I07 27107638
    361477 5j4d:E (3.1) BS05 MG ? GO:0002181 ... Q72I07 27107638
    361478 5j4d:EA (3.1) BS01 rna ? GO:0003735 ... P80340 27107638
    361479 5j4d:EC (3.1) BS01 rna ? GO:0003735 ... Q72I12 27107638
    361480 5j4d:EC (3.1) BS02 MG ? GO:0003735 ... Q72I12 27107638
    361481 5j4d:ED (3.1) BS01 rna ? GO:0003735 ... P62658 27107638
    361482 5j4d:ED (3.1) BS02 MG ? GO:0003735 ... P62658 27107638
    361483 5j4d:F (3.1) BS01 rna ? GO:0003735 ... Q72I04 27107638
    361484 5j4d:F (3.1) BS02 MG ? GO:0003735 ... Q72I04 27107638
    361485 5j4d:F (3.1) BS03 MG ? GO:0003735 ... Q72I04 27107638
    361486 5j4d:F (3.1) BS04 MG ? GO:0003735 ... Q72I04 27107638
    361487 5j4d:F (3.1) BS05 MG ? GO:0003735 ... Q72I04 27107638
    361488 5j4d:F (3.1) BS06 MG ? GO:0003735 ... Q72I04 27107638
    361489 5j4d:F (3.1) BS07 MG ? GO:0003735 ... Q72I04 27107638
    361490 5j4d:F (3.1) BS08 MG ? GO:0003735 ... Q72I04 27107638
    361491 5j4d:FA (3.1) BS01 rna ? GO:0003735 ... Q72L77 27107638
    361492 5j4d:FA (3.1) BS02 MG ? GO:0003735 ... Q72L77 27107638
    361493 5j4d:FA (3.1) BS03 MG ? GO:0003735 ... Q72L77 27107638
    361494 5j4d:FA (3.1) BS04 MG ? GO:0003735 ... Q72L77 27107638
    361495 5j4d:FA (3.1) BS05 MG ? GO:0003735 ... Q72L77 27107638
    361496 5j4d:FC (3.1) BS01 rna ? GO:0003735 ... Q72I22 27107638
    361497 5j4d:FC (3.1) BS02 rna ? GO:0003735 ... Q72I22 27107638
    361498 5j4d:FD (3.1) BS01 rna ? GO:0003735 ... P62659 27107638
    361499 5j4d:G (3.1) BS01 rna ? GO:0003735 ... Q72I05 27107638
    361500 5j4d:G (3.1) BS02 MG ? GO:0003735 ... Q72I05 27107638
    361501 5j4d:G (3.1) BS03 MG ? GO:0003735 ... Q72I05 27107638
    361502 5j4d:G (3.1) BS04 MG ? GO:0003735 ... Q72I05 27107638
    361503 5j4d:G (3.1) BS05 MG ? GO:0003735 ... Q72I05 27107638
    361504 5j4d:GA (3.1) BS01 rna ? GO:0003735 ... Q72I28 27107638
    361505 5j4d:GA (3.1) BS02 ZN ? GO:0003735 ... Q72I28 27107638
    361506 5j4d:GC (3.1) BS01 rna ? GO:0003735 ... Q72JR0 27107638
    361507 5j4d:GD (3.1) BS01 rna ? GO:0000028 ... P62660 27107638
    361508 5j4d:H (3.1) BS01 rna ? GO:0000049 ... Q72I16 27107638
    361509 5j4d:H (3.1) BS02 rna ? GO:0000049 ... Q72I16 27107638
    361510 5j4d:H (3.1) BS03 rna ? GO:0000049 ... Q72I16 27107638
    361511 5j4d:H (3.1) BS04 MG ? GO:0000049 ... Q72I16 27107638
    361512 5j4d:H (3.1) BS05 MG ? GO:0000049 ... Q72I16 27107638
    361513 5j4d:HC (3.1) BS01 rna ? GO:0003735 ... P62652 27107638
    361514 5j4d:HC (3.1) BS02 ZN ? GO:0003735 ... P62652 27107638
    361515 5j4d:HD (3.1) BS01 rna ? GO:0003723 ... P62661 27107638
    361516 5j4d:HD (3.1) BS02 MG ? GO:0003723 ... P62661 27107638
    361517 5j4d:I (3.1) BS01 rna ? GO:0002181 ... Q72I19 27107638
    361518 5j4d:I (3.1) BS02 MG ? GO:0002181 ... Q72I19 27107638
    361519 5j4d:I (3.1) BS03 MG ? GO:0002181 ... Q72I19 27107638
    361520 5j4d:IC (3.1) BS01 rna ? GO:0003735 ... Q72GW3 27107638
    361521 5j4d:IC (3.1) BS02 ZN ? GO:0003735 ... Q72GW3 27107638
    361522 5j4d:J (3.1) BS01 rna ? GO:0003735 ... Q72GV5 27107638
    361523 5j4d:J (3.1) BS02 MG ? GO:0003735 ... Q72GV5 27107638
    361524 5j4d:JA (3.1) BS01 rna ? GO:0003747 ... P0A7I0 27107638
    361525 5j4d:JA (3.1) BS02 rna ? GO:0003747 ... P0A7I0 27107638
    361526 5j4d:JA (3.1) BS03 rna ? GO:0003747 ... P0A7I0 27107638
    361527 5j4d:JA (3.1) BS04 rna ? GO:0003747 ... P0A7I0 27107638
    361528 5j4d:JA (3.1) BS05 MG ? GO:0003747 ... P0A7I0 27107638
    361529 5j4d:JA (3.1) BS06 MG ? GO:0003747 ... P0A7I0 27107638
    361530 5j4d:JB (3.1) BS01 rna ? GO:0002181 ... Q72I07 27107638
    361531 5j4d:JB (3.1) BS02 rna ? GO:0002181 ... Q72I07 27107638
    361532 5j4d:JB (3.1) BS03 MG ? GO:0002181 ... Q72I07 27107638
    361533 5j4d:JB (3.1) BS04 MG ? GO:0002181 ... Q72I07 27107638
    361534 5j4d:JB (3.1) BS05 MG ? GO:0002181 ... Q72I07 27107638
    361535 5j4d:JB (3.1) BS06 MG ? GO:0002181 ... Q72I07 27107638
    361536 5j4d:JB (3.1) BS07 MG ? GO:0002181 ... Q72I07 27107638
    361537 5j4d:JC (3.1) BS01 rna ? GO:0003735 ... P80340 27107638
    361538 5j4d:K (3.1) BS01 rna ? GO:0003729 ... Q72IN1 27107638
    361539 5j4d:K (3.1) BS02 MG ? GO:0003729 ... Q72IN1 27107638
    361540 5j4d:K (3.1) BS03 MG ? GO:0003729 ... Q72IN1 27107638
    361541 5j4d:K (3.1) BS04 MG ? GO:0003729 ... Q72IN1 27107638
    361542 5j4d:KA (3.1) BS01 rna ? GO:0003735 ... P62662 27107638
    361543 5j4d:KB (3.1) BS01 rna ? GO:0003735 ... Q72I04 27107638
    361544 5j4d:KB (3.1) BS02 MG ? GO:0003735 ... Q72I04 27107638
    361545 5j4d:KB (3.1) BS03 MG ? GO:0003735 ... Q72I04 27107638
    361546 5j4d:KB (3.1) BS04 MG ? GO:0003735 ... Q72I04 27107638
    361547 5j4d:KC (3.1) BS01 rna ? GO:0003735 ... Q72L77 27107638
    361548 5j4d:KC (3.1) BS02 MG ? GO:0003735 ... Q72L77 27107638
    361549 5j4d:KC (3.1) BS03 MG ? GO:0003735 ... Q72L77 27107638
    361550 5j4d:L (3.1) BS01 rna ? GO:0003735 ... Q72I14 27107638
    361551 5j4d:L (3.1) BS02 rna ? GO:0003735 ... Q72I14 27107638
    361552 5j4d:L (3.1) BS03 MG ? GO:0003735 ... Q72I14 27107638
    361553 5j4d:L (3.1) BS04 MG ? GO:0003735 ... Q72I14 27107638
    361554 5j4d:L (3.1) BS05 MG ? GO:0003735 ... Q72I14 27107638
    361555 5j4d:LA (3.1) BS01 rna ? GO:0003676 ... P62663 27107638
    361556 5j4d:LA (3.1) BS02 MG ? GO:0003676 ... P62663 27107638
    361557 5j4d:LB (3.1) BS01 rna ? GO:0003735 ... Q72I05 27107638
    361558 5j4d:LB (3.1) BS02 MG ? GO:0003735 ... Q72I05 27107638
    361559 5j4d:LB (3.1) BS03 MG ? GO:0003735 ... Q72I05 27107638
    361560 5j4d:LB (3.1) BS04 MG ? GO:0003735 ... Q72I05 27107638
    361561 5j4d:LC (3.1) BS01 rna ? GO:0003735 ... Q72I28 27107638
    361562 5j4d:LC (3.1) BS02 ZN ? GO:0003735 ... Q72I28 27107638
    361563 5j4d:M (3.1) BS01 rna ? GO:0003735 ... Q72I23 27107638
    361564 5j4d:M (3.1) BS02 rna ? GO:0003735 ... Q72I23 27107638
    361565 5j4d:M (3.1) BS03 MG ? GO:0003735 ... Q72I23 27107638
    361566 5j4d:M (3.1) BS04 MG ? GO:0003735 ... Q72I23 27107638
    361567 5j4d:M (3.1) BS05 MG ? GO:0003735 ... Q72I23 27107638
    361568 5j4d:M (3.1) BS06 MG ? GO:0003735 ... Q72I23 27107638
    361569 5j4d:M (3.1) BS07 MG ? GO:0003735 ... Q72I23 27107638
    361570 5j4d:MA (3.1) BS01 rna ? GO:0003723 ... P62664 27107638
    361571 5j4d:MA (3.1) BS02 MG ? GO:0003723 ... P62664 27107638
    361572 5j4d:MA (3.1) BS03 MG ? GO:0003723 ... P62664 27107638
    361573 5j4d:MB (3.1) BS01 rna ? GO:0000049 ... Q72I16 27107638
    361574 5j4d:MB (3.1) BS02 rna ? GO:0000049 ... Q72I16 27107638
    361575 5j4d:MB (3.1) BS03 rna ? GO:0000049 ... Q72I16 27107638
    361576 5j4d:MB (3.1) BS04 MG ? GO:0000049 ... Q72I16 27107638
    361577 5j4d:N (3.1) BS01 rna ? GO:0000049 ... Q72I11 27107638
    361578 5j4d:N (3.1) BS02 MG ? GO:0000049 ... Q72I11 27107638
    361579 5j4d:N (3.1) BS03 MG ? GO:0000049 ... Q72I11 27107638
    361580 5j4d:NA (3.1) BS01 rna ? GO:0003723 ... P62665 27107638
    361581 5j4d:NB (3.1) BS01 rna ? GO:0002181 ... Q72I19 27107638
    361582 5j4d:O (3.1) BS01 rna ? GO:0003735 ... Q72I33 27107638
    361583 5j4d:O (3.1) BS02 MG ? GO:0003735 ... Q72I33 27107638
    361584 5j4d:O (3.1) BS03 MG ? GO:0003735 ... Q72I33 27107638
    361585 5j4d:OA (3.1) BS01 rna ? GO:0003735 ... P62666 27107638
    361586 5j4d:OA (3.1) BS02 MG ? GO:0003735 ... P62666 27107638
    361587 5j4d:OB (3.1) BS01 rna ? GO:0003735 ... Q72GV5 27107638
    361588 5j4d:OC (3.1) BS01 rna ? GO:0003747 ... P0A7I0 27107638
    361589 5j4d:OC (3.1) BS02 rna ? GO:0003747 ... P0A7I0 27107638
    361590 5j4d:OC (3.1) BS03 rna ? GO:0003747 ... P0A7I0 27107638
    361591 5j4d:OC (3.1) BS04 rna ? GO:0003747 ... P0A7I0 27107638
    361592 5j4d:OC (3.1) BS05 MG ? GO:0003747 ... P0A7I0 27107638
    361593 5j4d:P (3.1) BS01 rna ? GO:0003735 ... Q72I20 27107638
    361594 5j4d:P (3.1) BS02 rna ? GO:0003735 ... Q72I20 27107638
    361595 5j4d:PA (3.1) BS01 rna ? GO:0000049 ... P62667 27107638
    361596 5j4d:PA (3.1) BS02 rna ? GO:0000049 ... P62667 27107638
    361597 5j4d:PB (3.1) BS01 rna ? GO:0003729 ... Q72IN1 27107638
    361598 5j4d:PB (3.1) BS02 MG ? GO:0003729 ... Q72IN1 27107638
    361599 5j4d:PB (3.1) BS03 MG ? GO:0003729 ... Q72IN1 27107638
    361600 5j4d:PC (3.1) BS01 rna ? GO:0003735 ... P62662 27107638

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).