SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    362201 5j7l:BN (3.0) BS01 rna ? GO:0000028 ... P0AG59 27382179
    362202 5j7l:BO (3.0) BS01 rna ? GO:0000028 ... P0ADZ4 27382179
    362203 5j7l:BO (3.0) BS02 rna ? GO:0000028 ... P0ADZ4 27382179
    362204 5j7l:BP (3.0) BS01 rna ? GO:0000028 ... P0A7T3 27382179
    362205 5j7l:BQ (3.0) BS01 rna ? GO:0000028 ... P0AG63 27382179
    362206 5j7l:BR (3.0) BS01 rna ? GO:0003735 ... P0A7T7 27382179
    362207 5j7l:BS (3.0) BS01 rna ? GO:0003723 ... P0A7U3 27382179
    362208 5j7l:BT (3.0) BS01 rna ? GO:0000028 ... P0A7U7 27382179
    362209 5j7l:BU (3.0) BS01 rna ? GO:0003735 ... P68679 27382179
    362210 5j7l:C0 (3.0) BS01 rna ? GO:0000027 ... P0AG51 27382179
    362211 5j7l:C0 (3.0) BS02 rna ? GO:0000027 ... P0AG51 27382179
    362212 5j7l:C1 (3.0) BS01 rna ? GO:0000027 ... P0A7N4 27382179
    362213 5j7l:C2 (3.0) BS01 rna ? GO:0000027 ... P0A7N9 27382179
    362214 5j7l:C3 (3.0) BS01 rna ? GO:0002181 ... P0A7P5 27382179
    362215 5j7l:C4 (3.0) BS01 rna ? GO:0002181 ... P0A7Q1 27382179
    362216 5j7l:C5 (3.0) BS01 rna ? GO:0002181 ... P0A7Q6 27382179
    362217 5j7l:C5 (3.0) BS02 ZN ? GO:0002181 ... P0A7Q6 27382179
    362218 5j7l:CC (3.0) BS01 rna ? GO:0000027 ... P60422 27382179
    362219 5j7l:CC (3.0) BS02 rna ? GO:0000027 ... P60422 27382179
    362220 5j7l:CD (3.0) BS01 rna ? GO:0000027 ... P60438 27382179
    362221 5j7l:CE (3.0) BS01 rna ? GO:0001070 ... P60723 27382179
    362222 5j7l:CF (3.0) BS01 rna ? GO:0000027 ... P62399 27382179
    362223 5j7l:CF (3.0) BS02 rna ? GO:0000027 ... P62399 27382179
    362224 5j7l:CG (3.0) BS01 rna ? GO:0000027 ... P0AG55 27382179
    362225 5j7l:CH (3.0) BS01 rna ? GO:0002181 ... P0A7R1 27382179
    362226 5j7l:CJ (3.0) BS01 rna ? GO:0000027 ... P0A7J7 27382179
    362227 5j7l:CK (3.0) BS01 rna ? GO:0002181 ... P0AA10 27382179
    362228 5j7l:CL (3.0) BS01 rna ? GO:0002181 ... P0ADY3 27382179
    362229 5j7l:CL (3.0) BS02 rna ? GO:0002181 ... P0ADY3 27382179
    362230 5j7l:CM (3.0) BS01 rna ? GO:0002181 ... P02413 27382179
    362231 5j7l:CN (3.0) BS01 rna ? GO:0000027 ... P0ADY7 27382179
    362232 5j7l:CN (3.0) BS02 rna ? GO:0000027 ... P0ADY7 27382179
    362233 5j7l:CO (3.0) BS01 rna ? GO:0000027 ... P0AG44 27382179
    362234 5j7l:CP (3.0) BS01 rna ? GO:0002181 ... P0C018 27382179
    362235 5j7l:CP (3.0) BS02 rna ? GO:0002181 ... P0C018 27382179
    362236 5j7l:CQ (3.0) BS01 rna ? GO:0000027 ... P0A7K6 27382179
    362237 5j7l:CQ (3.0) BS02 rna ? GO:0000027 ... P0A7K6 27382179
    362238 5j7l:CR (3.0) BS01 rna ? GO:0000027 ... P0A7L3 27382179
    362239 5j7l:CS (3.0) BS01 rna ? GO:0002181 ... P0AG48 27382179
    362240 5j7l:CT (3.0) BS01 rna ? GO:0002181 ... P61175 27382179
    362241 5j7l:CU (3.0) BS01 rna ? GO:0000027 ... P0ADZ0 27382179
    362242 5j7l:CV (3.0) BS01 rna ? GO:0000027 ... P60624 27382179
    362243 5j7l:CW (3.0) BS01 rna ? GO:0000027 ... P68919 27382179
    362244 5j7l:CW (3.0) BS02 rna ? GO:0000027 ... P68919 27382179
    362245 5j7l:CX (3.0) BS01 rna ? GO:0003735 ... P0A7L8 27382179
    362246 5j7l:CX (3.0) BS02 rna ? GO:0003735 ... P0A7L8 27382179
    362247 5j7l:CY (3.0) BS01 rna ? GO:0000027 ... P0A7M2 27382179
    362248 5j7l:CZ (3.0) BS01 rna ? GO:0000027 ... P0A7M6 27382179
    362249 5j7l:D0 (3.0) BS01 rna ? GO:0000027 ... P0AG51 27382179
    362250 5j7l:D1 (3.0) BS01 rna ? GO:0000027 ... P0A7N4 27382179
    362251 5j7l:D2 (3.0) BS01 rna ? GO:0000027 ... P0A7N9 27382179
    362252 5j7l:D3 (3.0) BS01 rna ? GO:0002181 ... P0A7P5 27382179
    362253 5j7l:D4 (3.0) BS01 rna ? GO:0002181 ... P0A7Q1 27382179
    362254 5j7l:D5 (3.0) BS01 rna ? GO:0002181 ... P0A7Q6 27382179
    362255 5j7l:D5 (3.0) BS02 ZN ? GO:0002181 ... P0A7Q6 27382179
    362256 5j7l:DC (3.0) BS01 rna ? GO:0000027 ... P60422 27382179
    362257 5j7l:DD (3.0) BS01 rna ? GO:0000027 ... P60438 27382179
    362258 5j7l:DE (3.0) BS01 rna ? GO:0001070 ... P60723 27382179
    362259 5j7l:DF (3.0) BS01 rna ? GO:0000027 ... P62399 27382179
    362260 5j7l:DF (3.0) BS02 rna ? GO:0000027 ... P62399 27382179
    362261 5j7l:DG (3.0) BS01 rna ? GO:0000027 ... P0AG55 27382179
    362262 5j7l:DH (3.0) BS01 rna ? GO:0002181 ... P0A7R1 27382179
    362263 5j7l:DH (3.0) BS02 rna ? GO:0002181 ... P0A7R1 27382179
    362264 5j7l:DI (3.0) BS01 rna ? GO:0003735 ... P0A7J3 27382179
    362265 5j7l:DJ (3.0) BS01 rna ? GO:0000027 ... P0A7J7 27382179
    362266 5j7l:DK (3.0) BS01 rna ? GO:0002181 ... P0AA10 27382179
    362267 5j7l:DL (3.0) BS01 rna ? GO:0002181 ... P0ADY3 27382179
    362268 5j7l:DL (3.0) BS02 rna ? GO:0002181 ... P0ADY3 27382179
    362269 5j7l:DM (3.0) BS01 rna ? GO:0002181 ... P02413 27382179
    362270 5j7l:DN (3.0) BS01 rna ? GO:0000027 ... P0ADY7 27382179
    362271 5j7l:DN (3.0) BS02 rna ? GO:0000027 ... P0ADY7 27382179
    362272 5j7l:DO (3.0) BS01 rna ? GO:0000027 ... P0AG44 27382179
    362273 5j7l:DP (3.0) BS01 rna ? GO:0002181 ... P0C018 27382179
    362274 5j7l:DP (3.0) BS02 rna ? GO:0002181 ... P0C018 27382179
    362275 5j7l:DQ (3.0) BS01 rna ? GO:0000027 ... P0A7K6 27382179
    362276 5j7l:DQ (3.0) BS02 rna ? GO:0000027 ... P0A7K6 27382179
    362277 5j7l:DR (3.0) BS01 rna ? GO:0000027 ... P0A7L3 27382179
    362278 5j7l:DS (3.0) BS01 rna ? GO:0002181 ... P0AG48 27382179
    362279 5j7l:DT (3.0) BS01 rna ? GO:0002181 ... P61175 27382179
    362280 5j7l:DU (3.0) BS01 rna ? GO:0000027 ... P0ADZ0 27382179
    362281 5j7l:DV (3.0) BS01 rna ? GO:0000027 ... P60624 27382179
    362282 5j7l:DW (3.0) BS01 rna ? GO:0000027 ... P68919 27382179
    362283 5j7l:DW (3.0) BS02 rna ? GO:0000027 ... P68919 27382179
    362284 5j7l:DX (3.0) BS01 rna ? GO:0003735 ... P0A7L8 27382179
    362285 5j7l:DX (3.0) BS02 rna ? GO:0003735 ... P0A7L8 27382179
    362286 5j7l:DY (3.0) BS01 rna ? GO:0000027 ... P0A7M2 27382179
    362287 5j7l:DZ (3.0) BS01 rna ? GO:0000027 ... P0A7M6 27382179
    362288 5j7o:A (2.37) BS01 peptide ? GO:0005198 ... A0A0H3TLP8 27185929
    362289 5j7o:B (2.37) BS01 peptide ? GO:0005198 ... A0A0H3TLP8 27185929
    362290 5j7o:C (2.37) BS01 peptide ? GO:0005198 ... A0A0H3TLP8 27185929
    362291 5j7o:D (2.37) BS01 peptide ? GO:0005198 ... A0A0H3TLP8 27185929
    362292 5j7o:E (2.37) BS01 peptide ? GO:0005198 ... A0A0H3TLP8 27185929
    362293 5j7o:F (2.37) BS01 peptide ? GO:0005198 ... A0A0H3TLP8 27185929
    362294 5j7p:A (1.85) BS01 6H1 5.3.2.1
    5.3.3.12
    GO:0001516 ... P14174 27156768
    362295 5j7p:A (1.85) BS02 6H1 5.3.2.1
    5.3.3.12
    GO:0001516 ... P14174 27156768
    362296 5j7p:B (1.85) BS01 6H1 5.3.2.1
    5.3.3.12
    GO:0001516 ... P14174 27156768
    362297 5j7p:B (1.85) BS02 6H1 5.3.2.1
    5.3.3.12
    GO:0001516 ... P14174 27156768
    362298 5j7p:C (1.85) BS01 6H1 5.3.2.1
    5.3.3.12
    GO:0001516 ... P14174 27156768
    362299 5j7p:C (1.85) BS02 6H1 5.3.2.1
    5.3.3.12
    GO:0001516 ... P14174 27156768
    362300 5j7q:A (2.05) BS01 6H2 5.3.2.1
    5.3.3.12
    GO:0001516 ... P14174 27156768 MOAD: Ki=26.6uM
    BindingDB: Ki=26600nM
    362301 5j7s:A (2.368) BS01 6H3 2.7.11.25 GO:0004672 ... O43318
    Q15750
    28011204
    362302 5j7u:A (2.44) BS01 peptide ? N/A A0A0H3TLP8 27185929
    362303 5j7u:B (2.44) BS01 peptide ? N/A A0A0H3TLP8 27185929
    362304 5j7u:C (2.44) BS01 peptide ? N/A A0A0H3TLP8 27185929
    362305 5j7u:D (2.44) BS01 peptide ? N/A A0A0H3TLP8 27185929
    362306 5j7u:E (2.44) BS01 peptide ? N/A A0A0H3TLP8 27185929
    362307 5j7u:F (2.44) BS01 peptide ? N/A A0A0H3TLP8 27185929
    362308 5j7u:G (2.44) BS01 peptide ? N/A A0A0H3TLP8 27185929
    362309 5j7u:H (2.44) BS01 peptide ? N/A A0A0H3TLP8 27185929
    362310 5j7u:I (2.44) BS01 peptide ? N/A A0A0H3TLP8 27185929
    362311 5j7u:J (2.44) BS01 peptide ? N/A A0A0H3TLP8 27185929
    362312 5j7u:K (2.44) BS01 peptide ? N/A A0A0H3TLP8 27185929
    362313 5j7u:L (2.44) BS01 peptide ? N/A A0A0H3TLP8 27185929
    362314 5j7w:C (2.5) BS01 MTX 2.1.1.45 GO:0004799 ... Q834R3 27517810 MOAD: Ki=13uM
    362315 5j7w:D (2.5) BS01 MTX 2.1.1.45 GO:0004799 ... Q834R3 27517810 MOAD: Ki=13uM
    362316 5j7x:A (1.9) BS01 FAD N/A GO:0004499 ... N/A 27472055
    362317 5j7y:AC (6.7) BS01 HEM ? GO:0005739 ... P24959 27654913
    362318 5j7y:AC (6.7) BS02 HEM ? GO:0005739 ... P24959 27654913
    362319 5j7y:AD (6.7) BS01 HEM N/A GO:0009055 ... N/A 27654913
    362320 5j7y:AE (6.7) BS01 FES N/A GO:0008121 ... N/A 27654913
    362321 5j7y:AN (6.7) BS01 HEM ? GO:0005739 ... P24959 27654913
    362322 5j7y:AO (6.7) BS01 HEM N/A GO:0009055 ... N/A 27654913
    362323 5j7y:AP (6.7) BS01 FES N/A GO:0008121 ... N/A 27654913
    362324 5j7y:B (6.7) BS01 SF4 N/A N/A N/A 27654913
    362325 5j7y:BN (6.7) BS01 HEA 7.1.1.9 GO:0004129 ... O78749 27654913
    362326 5j7y:BN (6.7) BS02 HEA 7.1.1.9 GO:0004129 ... O78749 27654913
    362327 5j7y:BO (6.7) BS01 CUA 7.1.1.9 GO:0004129 ... O78750 27654913
    362328 5j7y:E (6.7) BS01 FES N/A N/A N/A 27654913
    362329 5j7y:F (6.7) BS01 SF4 N/A N/A N/A 27654913
    362330 5j7y:G (6.7) BS01 SF4 N/A GO:0016020 ... N/A 27654913
    362331 5j7y:G (6.7) BS02 SF4 N/A GO:0016020 ... N/A 27654913
    362332 5j7y:G (6.7) BS03 FES N/A GO:0016020 ... N/A 27654913
    362333 5j7y:H (6.7) BS01 peptide N/A N/A N/A 27654913
    362334 5j7y:I (6.7) BS01 SF4 N/A N/A N/A 27654913
    362335 5j7y:I (6.7) BS02 SF4 N/A N/A N/A 27654913
    362336 5j7z:A (2.15) BS01 BGC N/A GO:0000272 ... N/A 28179425
    362337 5j7z:A (2.15) BS02 GAL N/A GO:0000272 ... N/A 28179425
    362338 5j7z:A (2.15) BS03 18C N/A GO:0000272 ... N/A 28179425
    362339 5j82:A (2.17) BS01 6GV 3.6.4.10 GO:0005524 ... P07900 29273709 MOAD: Kd=0.000000064M
    362340 5j84:A (2.4) BS01 MG 4.2.1.25
    4.2.1.6
    4.2.1.67
    GO:0008869 ... B5ZZ34 28574691
    362341 5j84:A (2.4) BS02 FES 4.2.1.25
    4.2.1.6
    4.2.1.67
    GO:0008869 ... B5ZZ34 28574691
    362342 5j84:B (2.4) BS01 MG 4.2.1.25
    4.2.1.6
    4.2.1.67
    GO:0008869 ... B5ZZ34 28574691
    362343 5j84:B (2.4) BS02 FES 4.2.1.25
    4.2.1.6
    4.2.1.67
    GO:0008869 ... B5ZZ34 28574691
    362344 5j84:C (2.4) BS01 MG 4.2.1.25
    4.2.1.6
    4.2.1.67
    GO:0008869 ... B5ZZ34 28574691
    362345 5j84:C (2.4) BS02 FES 4.2.1.25
    4.2.1.6
    4.2.1.67
    GO:0008869 ... B5ZZ34 28574691
    362346 5j84:D (2.4) BS01 MG 4.2.1.25
    4.2.1.6
    4.2.1.67
    GO:0008869 ... B5ZZ34 28574691
    362347 5j84:D (2.4) BS02 FES 4.2.1.25
    4.2.1.6
    4.2.1.67
    GO:0008869 ... B5ZZ34 28574691
    362348 5j84:E (2.4) BS01 MG 4.2.1.25
    4.2.1.6
    4.2.1.67
    GO:0008869 ... B5ZZ34 28574691
    362349 5j84:E (2.4) BS02 FES 4.2.1.25
    4.2.1.6
    4.2.1.67
    GO:0008869 ... B5ZZ34 28574691
    362350 5j84:F (2.4) BS01 MG 4.2.1.25
    4.2.1.6
    4.2.1.67
    GO:0008869 ... B5ZZ34 28574691
    362351 5j84:F (2.4) BS02 FES 4.2.1.25
    4.2.1.6
    4.2.1.67
    GO:0008869 ... B5ZZ34 28574691
    362352 5j84:G (2.4) BS01 MG 4.2.1.25
    4.2.1.6
    4.2.1.67
    GO:0008869 ... B5ZZ34 28574691
    362353 5j84:G (2.4) BS02 FES 4.2.1.25
    4.2.1.6
    4.2.1.67
    GO:0008869 ... B5ZZ34 28574691
    362354 5j84:H (2.4) BS01 MG 4.2.1.25
    4.2.1.6
    4.2.1.67
    GO:0008869 ... B5ZZ34 28574691
    362355 5j84:H (2.4) BS02 FES 4.2.1.25
    4.2.1.6
    4.2.1.67
    GO:0008869 ... B5ZZ34 28574691
    362356 5j85:A (2.6) BS01 FES ? GO:0016829 ... I9XDU6 28574691
    362357 5j85:A (2.6) BS02 MG ? GO:0016829 ... I9XDU6 28574691
    362358 5j86:A (1.87) BS01 6GW 3.6.4.10 GO:0005524 ... P07900 29273709 MOAD: Kd=0.000000064M
    362359 5j87:A (1.59) BS01 N42 2.7.10.2 GO:0004672 ... Q06187 28315597 BindingDB: EC50=<30nM, Ki=8.9nM, IC50=7.0nM
    362360 5j87:B (1.59) BS01 N42 2.7.10.2 GO:0004672 ... Q06187 28315597 BindingDB: EC50=<30nM, Ki=8.9nM, IC50=7.0nM
    362361 5j87:C (1.59) BS01 N42 2.7.10.2 GO:0004672 ... Q06187 28315597 BindingDB: EC50=<30nM, Ki=8.9nM, IC50=7.0nM
    362362 5j87:D (1.59) BS01 N42 2.7.10.2 GO:0004672 ... Q06187 28315597 BindingDB: EC50=<30nM, Ki=8.9nM, IC50=7.0nM
    362363 5j88:AB (3.32) BS01 rna ? GO:0000028 ... P0A7V0 27382179
    362364 5j88:AB (3.32) BS02 ZN ? GO:0000028 ... P0A7V0 27382179
    362365 5j88:AC (3.32) BS01 rna ? GO:0003676 ... P0A7V3 27382179
    362366 5j88:AD (3.32) BS01 rna ? GO:0000028 ... P0A7V8 27382179
    362367 5j88:AE (3.32) BS01 rna ? GO:0000028 ... P0A7W1 27382179
    362368 5j88:AF (3.32) BS01 rna ? GO:0003735 ... P02358 27382179
    362369 5j88:AG (3.32) BS01 rna ? GO:0003723 ... P02359 27382179
    362370 5j88:AH (3.32) BS01 rna ? GO:0000028 ... P0A7W7 27382179
    362371 5j88:AI (3.32) BS01 rna ? GO:0000049 ... P0A7X3 27382179
    362372 5j88:AJ (3.32) BS01 rna ? GO:0000049 ... P0A7R5 27382179
    362373 5j88:AK (3.32) BS01 rna ? GO:0002181 ... P0A7R9 27382179
    362374 5j88:AL (3.32) BS01 rna ? GO:0000049 ... P0A7S3 27382179
    362375 5j88:AM (3.32) BS01 rna ? GO:0000049 ... P0A7S9 27382179
    362376 5j88:AN (3.32) BS01 rna ? GO:0000028 ... P0AG59 27382179
    362377 5j88:AO (3.32) BS01 rna ? GO:0000028 ... P0ADZ4 27382179
    362378 5j88:AO (3.32) BS02 rna ? GO:0000028 ... P0ADZ4 27382179
    362379 5j88:AP (3.32) BS01 rna ? GO:0000028 ... P0A7T3 27382179
    362380 5j88:AQ (3.32) BS01 rna ? GO:0000028 ... P0AG63 27382179
    362381 5j88:AR (3.32) BS01 rna ? GO:0003735 ... P0A7T7 27382179
    362382 5j88:AS (3.32) BS01 rna ? GO:0003723 ... P0A7U3 27382179
    362383 5j88:AT (3.32) BS01 rna ? GO:0000028 ... P0A7U7 27382179
    362384 5j88:AU (3.32) BS01 rna ? GO:0003735 ... P68679 27382179
    362385 5j88:BB (3.32) BS01 rna ? GO:0000028 ... P0A7V0 27382179
    362386 5j88:BB (3.32) BS02 rna ? GO:0000028 ... P0A7V0 27382179
    362387 5j88:BC (3.32) BS01 rna ? GO:0003676 ... P0A7V3 27382179
    362388 5j88:BD (3.32) BS01 rna ? GO:0000028 ... P0A7V8 27382179
    362389 5j88:BD (3.32) BS02 rna ? GO:0000028 ... P0A7V8 27382179
    362390 5j88:BE (3.32) BS01 rna ? GO:0000028 ... P0A7W1 27382179
    362391 5j88:BF (3.32) BS01 rna ? GO:0003735 ... P02358 27382179
    362392 5j88:BG (3.32) BS01 rna ? GO:0003723 ... P02359 27382179
    362393 5j88:BH (3.32) BS01 rna ? GO:0000028 ... P0A7W7 27382179
    362394 5j88:BI (3.32) BS01 rna ? GO:0000049 ... P0A7X3 27382179
    362395 5j88:BJ (3.32) BS01 rna ? GO:0000049 ... P0A7R5 27382179
    362396 5j88:BK (3.32) BS01 rna ? GO:0002181 ... P0A7R9 27382179
    362397 5j88:BL (3.32) BS01 rna ? GO:0000049 ... P0A7S3 27382179
    362398 5j88:BM (3.32) BS01 rna ? GO:0000049 ... P0A7S9 27382179
    362399 5j88:BN (3.32) BS01 rna ? GO:0000028 ... P0AG59 27382179
    362400 5j88:BO (3.32) BS01 rna ? GO:0000028 ... P0ADZ4 27382179

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).