SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    363201 5jc9:AH (3.03) BS01 rna ? GO:0000028 ... P0A7W7 27382179
    363202 5jc9:AI (3.03) BS01 rna ? GO:0000049 ... P0A7X3 27382179
    363203 5jc9:AJ (3.03) BS01 rna ? GO:0000049 ... P0A7R5 27382179
    363204 5jc9:AK (3.03) BS01 rna ? GO:0002181 ... P0A7R9 27382179
    363205 5jc9:AL (3.03) BS01 rna ? GO:0000049 ... P0A7S3 27382179
    363206 5jc9:AM (3.03) BS01 rna ? GO:0000049 ... P0A7S9 27382179
    363207 5jc9:AN (3.03) BS01 rna ? GO:0000028 ... P0AG59 27382179
    363208 5jc9:AO (3.03) BS01 rna ? GO:0000028 ... P0ADZ4 27382179
    363209 5jc9:AO (3.03) BS02 rna ? GO:0000028 ... P0ADZ4 27382179
    363210 5jc9:AP (3.03) BS01 rna ? GO:0000028 ... P0A7T3 27382179
    363211 5jc9:AQ (3.03) BS01 rna ? GO:0000028 ... P0AG63 27382179
    363212 5jc9:AR (3.03) BS01 rna ? GO:0003735 ... P0A7T7 27382179
    363213 5jc9:AS (3.03) BS01 rna ? GO:0003723 ... P0A7U3 27382179
    363214 5jc9:AT (3.03) BS01 rna ? GO:0000028 ... P0A7U7 27382179
    363215 5jc9:AU (3.03) BS01 rna ? GO:0003735 ... P68679 27382179
    363216 5jc9:BB (3.03) BS01 rna ? GO:0000028 ... P0A7V0 27382179
    363217 5jc9:BC (3.03) BS01 rna ? GO:0003676 ... P0A7V3 27382179
    363218 5jc9:BD (3.03) BS01 rna ? GO:0000028 ... P0A7V8 27382179
    363219 5jc9:BD (3.03) BS02 rna ? GO:0000028 ... P0A7V8 27382179
    363220 5jc9:BE (3.03) BS01 rna ? GO:0000028 ... P0A7W1 27382179
    363221 5jc9:BF (3.03) BS01 rna ? GO:0003735 ... P02358 27382179
    363222 5jc9:BG (3.03) BS01 rna ? GO:0003723 ... P02359 27382179
    363223 5jc9:BH (3.03) BS01 rna ? GO:0000028 ... P0A7W7 27382179
    363224 5jc9:BI (3.03) BS01 rna ? GO:0000049 ... P0A7X3 27382179
    363225 5jc9:BJ (3.03) BS01 rna ? GO:0000049 ... P0A7R5 27382179
    363226 5jc9:BK (3.03) BS01 rna ? GO:0002181 ... P0A7R9 27382179
    363227 5jc9:BL (3.03) BS01 rna ? GO:0000049 ... P0A7S3 27382179
    363228 5jc9:BM (3.03) BS01 rna ? GO:0000049 ... P0A7S9 27382179
    363229 5jc9:BN (3.03) BS01 rna ? GO:0000028 ... P0AG59 27382179
    363230 5jc9:BO (3.03) BS01 rna ? GO:0000028 ... P0ADZ4 27382179
    363231 5jc9:BO (3.03) BS02 rna ? GO:0000028 ... P0ADZ4 27382179
    363232 5jc9:BP (3.03) BS01 rna ? GO:0000028 ... P0A7T3 27382179
    363233 5jc9:BQ (3.03) BS01 rna ? GO:0000028 ... P0AG63 27382179
    363234 5jc9:BR (3.03) BS01 rna ? GO:0003735 ... P0A7T7 27382179
    363235 5jc9:BS (3.03) BS01 rna ? GO:0003723 ... P0A7U3 27382179
    363236 5jc9:BT (3.03) BS01 rna ? GO:0000028 ... P0A7U7 27382179
    363237 5jc9:BU (3.03) BS01 rna ? GO:0003735 ... P68679 27382179
    363238 5jc9:C0 (3.03) BS01 rna ? GO:0000027 ... P0AG51 27382179
    363239 5jc9:C0 (3.03) BS02 rna ? GO:0000027 ... P0AG51 27382179
    363240 5jc9:C1 (3.03) BS01 rna ? GO:0000027 ... P0A7N4 27382179
    363241 5jc9:C2 (3.03) BS01 rna ? GO:0000027 ... P0A7N9 27382179
    363242 5jc9:C3 (3.03) BS01 rna ? GO:0002181 ... P0A7P5 27382179
    363243 5jc9:C4 (3.03) BS01 rna ? GO:0002181 ... P0A7Q1 27382179
    363244 5jc9:C5 (3.03) BS01 rna ? GO:0002181 ... P0A7Q6 27382179
    363245 5jc9:C5 (3.03) BS02 ZN ? GO:0002181 ... P0A7Q6 27382179
    363246 5jc9:CC (3.03) BS01 rna ? GO:0000027 ... P60422 27382179
    363247 5jc9:CC (3.03) BS02 rna ? GO:0000027 ... P60422 27382179
    363248 5jc9:CD (3.03) BS01 rna ? GO:0000027 ... P60438 27382179
    363249 5jc9:CE (3.03) BS01 rna ? GO:0001070 ... P60723 27382179
    363250 5jc9:CF (3.03) BS01 rna ? GO:0000027 ... P62399 27382179
    363251 5jc9:CF (3.03) BS02 rna ? GO:0000027 ... P62399 27382179
    363252 5jc9:CG (3.03) BS01 rna ? GO:0000027 ... P0AG55 27382179
    363253 5jc9:CH (3.03) BS01 rna ? GO:0002181 ... P0A7R1 27382179
    363254 5jc9:CJ (3.03) BS01 rna ? GO:0000027 ... P0A7J7 27382179
    363255 5jc9:CK (3.03) BS01 rna ? GO:0002181 ... P0AA10 27382179
    363256 5jc9:CL (3.03) BS01 rna ? GO:0002181 ... P0ADY3 27382179
    363257 5jc9:CL (3.03) BS02 rna ? GO:0002181 ... P0ADY3 27382179
    363258 5jc9:CM (3.03) BS01 rna ? GO:0002181 ... P02413 27382179
    363259 5jc9:CN (3.03) BS01 rna ? GO:0000027 ... P0ADY7 27382179
    363260 5jc9:CN (3.03) BS02 rna ? GO:0000027 ... P0ADY7 27382179
    363261 5jc9:CO (3.03) BS01 rna ? GO:0000027 ... P0AG44 27382179
    363262 5jc9:CP (3.03) BS01 rna ? GO:0002181 ... P0C018 27382179
    363263 5jc9:CP (3.03) BS02 rna ? GO:0002181 ... P0C018 27382179
    363264 5jc9:CQ (3.03) BS01 rna ? GO:0000027 ... P0A7K6 27382179
    363265 5jc9:CQ (3.03) BS02 rna ? GO:0000027 ... P0A7K6 27382179
    363266 5jc9:CR (3.03) BS01 rna ? GO:0000027 ... P0A7L3 27382179
    363267 5jc9:CS (3.03) BS01 rna ? GO:0002181 ... P0AG48 27382179
    363268 5jc9:CT (3.03) BS01 rna ? GO:0002181 ... P61175 27382179
    363269 5jc9:CU (3.03) BS01 rna ? GO:0000027 ... P0ADZ0 27382179
    363270 5jc9:CV (3.03) BS01 rna ? GO:0000027 ... P60624 27382179
    363271 5jc9:CW (3.03) BS01 rna ? GO:0000027 ... P68919 27382179
    363272 5jc9:CW (3.03) BS02 rna ? GO:0000027 ... P68919 27382179
    363273 5jc9:CX (3.03) BS01 rna ? GO:0003735 ... P0A7L8 27382179
    363274 5jc9:CX (3.03) BS02 rna ? GO:0003735 ... P0A7L8 27382179
    363275 5jc9:CY (3.03) BS01 rna ? GO:0000027 ... P0A7M2 27382179
    363276 5jc9:CZ (3.03) BS01 rna ? GO:0000027 ... P0A7M6 27382179
    363277 5jc9:D0 (3.03) BS01 rna ? GO:0000027 ... P0AG51 27382179
    363278 5jc9:D0 (3.03) BS02 rna ? GO:0000027 ... P0AG51 27382179
    363279 5jc9:D1 (3.03) BS01 rna ? GO:0000027 ... P0A7N4 27382179
    363280 5jc9:D2 (3.03) BS01 rna ? GO:0000027 ... P0A7N9 27382179
    363281 5jc9:D3 (3.03) BS01 rna ? GO:0002181 ... P0A7P5 27382179
    363282 5jc9:D4 (3.03) BS01 rna ? GO:0002181 ... P0A7Q1 27382179
    363283 5jc9:D5 (3.03) BS01 rna ? GO:0002181 ... P0A7Q6 27382179
    363284 5jc9:D5 (3.03) BS02 ZN ? GO:0002181 ... P0A7Q6 27382179
    363285 5jc9:DC (3.03) BS01 rna ? GO:0000027 ... P60422 27382179
    363286 5jc9:DD (3.03) BS01 rna ? GO:0000027 ... P60438 27382179
    363287 5jc9:DE (3.03) BS01 rna ? GO:0001070 ... P60723 27382179
    363288 5jc9:DF (3.03) BS01 rna ? GO:0000027 ... P62399 27382179
    363289 5jc9:DF (3.03) BS02 rna ? GO:0000027 ... P62399 27382179
    363290 5jc9:DG (3.03) BS01 rna ? GO:0000027 ... P0AG55 27382179
    363291 5jc9:DH (3.03) BS01 rna ? GO:0002181 ... P0A7R1 27382179
    363292 5jc9:DH (3.03) BS02 rna ? GO:0002181 ... P0A7R1 27382179
    363293 5jc9:DI (3.03) BS01 rna ? GO:0003735 ... P0A7J3 27382179
    363294 5jc9:DJ (3.03) BS01 rna ? GO:0000027 ... P0A7J7 27382179
    363295 5jc9:DK (3.03) BS01 rna ? GO:0002181 ... P0AA10 27382179
    363296 5jc9:DL (3.03) BS01 rna ? GO:0002181 ... P0ADY3 27382179
    363297 5jc9:DL (3.03) BS02 rna ? GO:0002181 ... P0ADY3 27382179
    363298 5jc9:DM (3.03) BS01 rna ? GO:0002181 ... P02413 27382179
    363299 5jc9:DN (3.03) BS01 rna ? GO:0000027 ... P0ADY7 27382179
    363300 5jc9:DN (3.03) BS02 rna ? GO:0000027 ... P0ADY7 27382179
    363301 5jc9:DO (3.03) BS01 rna ? GO:0000027 ... P0AG44 27382179
    363302 5jc9:DP (3.03) BS01 rna ? GO:0002181 ... P0C018 27382179
    363303 5jc9:DP (3.03) BS02 rna ? GO:0002181 ... P0C018 27382179
    363304 5jc9:DQ (3.03) BS01 rna ? GO:0000027 ... P0A7K6 27382179
    363305 5jc9:DQ (3.03) BS02 rna ? GO:0000027 ... P0A7K6 27382179
    363306 5jc9:DR (3.03) BS01 rna ? GO:0000027 ... P0A7L3 27382179
    363307 5jc9:DS (3.03) BS01 rna ? GO:0002181 ... P0AG48 27382179
    363308 5jc9:DT (3.03) BS01 rna ? GO:0002181 ... P61175 27382179
    363309 5jc9:DU (3.03) BS01 rna ? GO:0000027 ... P0ADZ0 27382179
    363310 5jc9:DV (3.03) BS01 rna ? GO:0000027 ... P60624 27382179
    363311 5jc9:DW (3.03) BS01 rna ? GO:0000027 ... P68919 27382179
    363312 5jc9:DW (3.03) BS02 rna ? GO:0000027 ... P68919 27382179
    363313 5jc9:DX (3.03) BS01 rna ? GO:0003735 ... P0A7L8 27382179
    363314 5jc9:DX (3.03) BS02 rna ? GO:0003735 ... P0A7L8 27382179
    363315 5jc9:DY (3.03) BS01 rna ? GO:0000027 ... P0A7M2 27382179
    363316 5jc9:DZ (3.03) BS01 rna ? GO:0000027 ... P0A7M6 27382179
    363317 5jca:L (1.5) BS01 SF4 1.18.1.2
    1.8.1.19
    GO:0004324 ... Q8U195 28394885
    363318 5jca:L (1.5) BS02 SF4 1.18.1.2
    1.8.1.19
    GO:0004324 ... Q8U195 28394885
    363319 5jca:L (1.5) BS03 FAD 1.18.1.2
    1.8.1.19
    GO:0004324 ... Q8U195 28394885
    363320 5jca:L (1.5) BS04 NDP 1.18.1.2
    1.8.1.19
    GO:0004324 ... Q8U195 28394885
    363321 5jca:S (1.5) BS01 FAD 1.18.1.2
    1.8.1.19
    GO:0004324 ... Q8U194 28394885
    363322 5jca:S (1.5) BS02 FES 1.18.1.2
    1.8.1.19
    GO:0004324 ... Q8U194 28394885
    363323 5jcb:A (2.3) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 28035796
    363324 5jcb:A (2.3) BS02 MG 3.6.5.- GO:0000226 ... Q2XVP4 28035796
    363325 5jcb:A (2.3) BS03 CA 3.6.5.- GO:0000226 ... Q2XVP4 28035796
    363326 5jcb:A (2.3) BS04 NV4 3.6.5.- GO:0000226 ... Q2XVP4 28035796
    363327 5jcb:B (2.3) BS01 GDP ? GO:0000226 ... P02554 28035796
    363328 5jcb:B (2.3) BS02 NV4 ? GO:0000226 ... P02554 28035796
    363329 5jcb:C (2.3) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 28035796
    363330 5jcb:C (2.3) BS02 NV4 3.6.5.- GO:0000226 ... Q2XVP4 28035796
    363331 5jcb:D (2.3) BS01 GDP ? GO:0000226 ... P02554 28035796
    363332 5jcb:D (2.3) BS02 MG ? GO:0000226 ... P02554 28035796
    363333 5jcb:D (2.3) BS03 NV4 ? GO:0000226 ... P02554 28035796
    363334 5jcb:F (2.3) BS01 ACP N/A GO:0036211 ... N/A 28035796
    363335 5jcf:A (2.6) BS01 rna 3.6.4.13 GO:0003677 ... D9N195 27203181
    363336 5jcf:A (2.6) BS02 rna 3.6.4.13 GO:0003677 ... D9N195 27203181
    363337 5jcf:A (2.6) BS03 ADP 3.6.4.13 GO:0003677 ... D9N195 27203181
    363338 5jcf:A (2.6) BS04 ZN 3.6.4.13 GO:0003677 ... D9N195 27203181
    363339 5jcf:B (2.6) BS01 rna 3.6.4.13 GO:0003677 ... D9N195 27203181
    363340 5jcf:B (2.6) BS02 rna 3.6.4.13 GO:0003677 ... D9N195 27203181
    363341 5jcf:B (2.6) BS03 ADP 3.6.4.13 GO:0003677 ... D9N195 27203181
    363342 5jcf:B (2.6) BS04 ZN 3.6.4.13 GO:0003677 ... D9N195 27203181
    363343 5jch:A (2.95) BS01 rna 3.6.4.13 GO:0003677 ... D9N195 27203181
    363344 5jch:A (2.95) BS02 rna 3.6.4.13 GO:0003677 ... D9N195 27203181
    363345 5jch:A (2.95) BS03 ZN 3.6.4.13 GO:0003677 ... D9N195 27203181
    363346 5jch:A (2.95) BS04 ADP 3.6.4.13 GO:0003677 ... D9N195 27203181
    363347 5jch:B (2.95) BS01 rna 3.6.4.13 GO:0003677 ... D9N195 27203181
    363348 5jch:B (2.95) BS02 rna 3.6.4.13 GO:0003677 ... D9N195 27203181
    363349 5jch:B (2.95) BS03 ZN 3.6.4.13 GO:0003677 ... D9N195 27203181
    363350 5jch:B (2.95) BS04 ADP 3.6.4.13 GO:0003677 ... D9N195 27203181
    363351 5jci:A (1.7) BS01 FAD 1.6.5.4 GO:0000166 ... Q652L6 27652777
    363352 5jcj:A (1.76) BS01 NAP ? GO:0000166 ... O76290 27411733
    363353 5jcj:A (1.76) BS02 6JM ? GO:0000166 ... O76290 27411733
    363354 5jcj:B (1.76) BS01 NAP ? GO:0000166 ... O76290 27411733
    363355 5jcj:B (1.76) BS02 6JM ? GO:0000166 ... O76290 27411733
    363356 5jcj:C (1.76) BS01 NAP ? GO:0000166 ... O76290 27411733
    363357 5jcj:D (1.76) BS01 NAP ? GO:0000166 ... O76290 27411733
    363358 5jcj:D (1.76) BS02 6JM ? GO:0000166 ... O76290 27411733
    363359 5jck:A (2.0) BS01 FAD 1.6.5.4 GO:0000166 ... Q652L6 27652777
    363360 5jck:A (2.0) BS02 NAD 1.6.5.4 GO:0000166 ... Q652L6 27652777
    363361 5jcl:A (1.8) BS01 FAD 1.6.5.4 GO:0000166 ... Q652L6 27652777
    363362 5jcl:A (1.8) BS02 NDP 1.6.5.4 GO:0000166 ... Q652L6 27652777
    363363 5jcl:B (1.8) BS01 NDP 1.6.5.4 GO:0000166 ... Q652L6 27652777
    363364 5jcl:B (1.8) BS02 FAD 1.6.5.4 GO:0000166 ... Q652L6 27652777
    363365 5jcm:A (1.9) BS01 FAD 1.6.5.4 GO:0000166 ... Q652L6 27652777
    363366 5jcm:A (1.9) BS02 NAD 1.6.5.4 GO:0000166 ... Q652L6 27652777
    363367 5jcm:A (1.9) BS03 ISD 1.6.5.4 GO:0000166 ... Q652L6 27652777
    363368 5jcm:B (1.9) BS01 FAD 1.6.5.4 GO:0000166 ... Q652L6 27652777
    363369 5jcm:B (1.9) BS02 NAD 1.6.5.4 GO:0000166 ... Q652L6 27652777
    363370 5jcm:B (1.9) BS03 ISD 1.6.5.4 GO:0000166 ... Q652L6 27652777
    363371 5jcn:A (2.29) BS01 FAD 1.6.5.4 GO:0000166 ... Q652L6 27652777
    363372 5jcn:A (2.29) BS02 NAD 1.6.5.4 GO:0000166 ... Q652L6 27652777
    363373 5jcn:A (2.29) BS03 ASC 1.6.5.4 GO:0000166 ... Q652L6 27652777
    363374 5jcn:B (2.29) BS01 FAD 1.6.5.4 GO:0000166 ... Q652L6 27652777
    363375 5jcn:B (2.29) BS02 NAD 1.6.5.4 GO:0000166 ... Q652L6 27652777
    363376 5jcn:B (2.29) BS03 ASC 1.6.5.4 GO:0000166 ... Q652L6 27652777
    363377 5jco:A (4.0) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 27129203
    363378 5jco:B (4.0) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 27129203
    363379 5jco:C (4.0) BS01 G2P ? GO:0000226 ... Q13509 27129203
    363380 5jco:D (4.0) BS01 G2P ? GO:0000226 ... Q13509 27129203
    363381 5jco:E (4.0) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 27129203
    363382 5jco:F (4.0) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 27129203
    363383 5jco:G (4.0) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 27129203
    363384 5jco:H (4.0) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 27129203
    363385 5jco:I (4.0) BS01 G2P ? GO:0000226 ... Q13509 27129203
    363386 5jco:J (4.0) BS01 G2P ? GO:0000226 ... Q13509 27129203
    363387 5jco:K (4.0) BS01 G2P ? GO:0000226 ... Q13509 27129203
    363388 5jco:L (4.0) BS01 G2P ? GO:0000226 ... Q13509 27129203
    363389 5jcp:A (2.1) BS01 GDP ?
    3.6.5.2
    GO:0000902 ... P61586
    Q8WWN8
    27311713
    363390 5jcp:A (2.1) BS02 ALF ?
    3.6.5.2
    GO:0000902 ... P61586
    Q8WWN8
    27311713
    363391 5jcp:B (2.1) BS01 GDP ?
    3.6.5.2
    GO:0000902 ... P61586
    Q8WWN8
    27311713
    363392 5jcp:B (2.1) BS02 ALF ?
    3.6.5.2
    GO:0000902 ... P61586
    Q8WWN8
    27311713
    363393 5jcq:A (1.602) BS01 MMA ? GO:0007155 ... P08191 N/A
    363394 5jcq:B (1.602) BS01 MMA ? GO:0007155 ... P08191 N/A
    363395 5jcr:A (1.701) BS01 MMA ? GO:0007155 ... P08191 N/A
    363396 5jcr:B (1.701) BS01 MMA ? GO:0007155 ... P08191 N/A
    363397 5jcs:A (9.5) BS01 rna ? GO:0002181 ... P0CX45 26619264
    363398 5jcs:B (9.5) BS01 rna ? GO:0000027 ... P14126 26619264
    363399 5jcs:C (9.5) BS01 rna ? GO:0002181 ... P10664 26619264
    363400 5jcs:C (9.5) BS02 rna ? GO:0002181 ... P10664 26619264

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).