SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    364601 5jq9:A (2.101) BS01 6MB 2.5.1.15 GO:0004156 ... A0A2S9PLG4 27423480
    364602 5jq9:B (2.101) BS01 6MB 2.5.1.15 GO:0004156 ... A0A2S9PLG4 27423480
    364603 5jqa:A (1.8) BS01 peptide ? GO:0000086 ... P0DP23 N/A
    364604 5jqa:A (1.8) BS02 CA ? GO:0000086 ... P0DP23 N/A
    364605 5jqa:A (1.8) BS03 CA ? GO:0000086 ... P0DP23 N/A
    364606 5jqa:A (1.8) BS04 CA ? GO:0000086 ... P0DP23 N/A
    364607 5jqa:A (1.8) BS05 CA ? GO:0000086 ... P0DP23 N/A
    364608 5jqb:B (2.68) BS01 IBP ? N/A Q05320 27362232
    364609 5jqg:A (2.24) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 27357539
    364610 5jqg:A (2.24) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 27357539
    364611 5jqg:B (2.24) BS01 GDP ? GO:0000226 ... P02554 27357539
    364612 5jqg:C (2.24) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 27357539
    364613 5jqg:C (2.24) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 27357539
    364614 5jqg:D (2.24) BS01 GTP ? GO:0000226 ... P02554 27357539
    364615 5jqg:F (2.24) BS01 ACP N/A GO:0036211 ... N/A 27357539
    364616 5jqh:A (3.2) BS01 CAU 3.2.1.17 GO:0003796 ... P00720
    P07550
    27409812
    364617 5jqh:B (3.2) BS01 CAU 3.2.1.17 GO:0003796 ... P00720
    P07550
    27409812
    364618 5jqi:B (1.962) BS01 peptide ? GO:0007155 ... Q1R2J4 28246638
    364619 5jqi:D (1.962) BS01 peptide ? GO:0007155 ... Q1R2J4 28246638
    364620 5jqi:F (1.962) BS01 peptide ? GO:0007155 ... Q1R2J4 28246638
    364621 5jqi:H (1.962) BS01 peptide ? GO:0007155 ... Q1R2J4 28246638
    364622 5jqj:A (1.67) BS01 ZN 3.5.2.6 GO:0008270 ... C7C422 N/A
    364623 5jqj:A (1.67) BS02 ZN 3.5.2.6 GO:0008270 ... C7C422 N/A
    364624 5jqj:A (1.67) BS03 MG 3.5.2.6 GO:0008270 ... C7C422 N/A
    364625 5jqk:A (2.35) BS01 MN 3.4.11.9 GO:0070006 ... A0A144A2H0 27462122
    364626 5jqk:A (2.35) BS02 MN 3.4.11.9 GO:0070006 ... A0A144A2H0 27462122
    364627 5jqk:B (2.35) BS01 MN 3.4.11.9 GO:0070006 ... A0A144A2H0 27462122
    364628 5jqk:B (2.35) BS02 MN 3.4.11.9 GO:0070006 ... A0A144A2H0 27462122
    364629 5jqp:B (2.2) BS01 CA ? N/A G0S9M2 27576940
    364630 5jqp:B (2.2) BS02 CA ? N/A G0S9M2 27576940
    364631 5jqr:A (1.81) BS01 HEM 1.11.1.11 GO:0004601 ... Q43758 27897163
    364632 5jqs:A (2.65) BS01 AYE 3.4.19.12 GO:0004843 ... Q8N5J2 27292798
    364633 5jqt:A (1.36) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 27722534
    364634 5jqt:A (1.36) BS02 6M4 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 27722534
    364635 5jqt:A (1.36) BS03 6M4 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 27722534
    364636 5jqt:A (1.36) BS04 6M9 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 27722534 MOAD: Ki=8180nM
    BindingDB: Ki=8180nM
    364637 5jqt:A (1.36) BS05 HGB 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 27722534
    364638 5jqt:A (1.36) BS06 6M9 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 27722534 MOAD: Ki=8180nM
    BindingDB: Ki=8180nM
    364639 5jqt:A (1.36) BS07 6M4 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 27722534
    364640 5jqt:A (1.36) BS08 6M4 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 27722534
    364641 5jqu:A (2.162) BS01 FDE 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 27575374
    364642 5jqu:B (2.162) BS01 FDE 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 27575374
    364643 5jqu:C (2.162) BS01 FDE 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 27575374
    364644 5jqu:D (2.162) BS01 FDE 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 27575374
    364645 5jqu:E (2.162) BS01 FDE 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 27575374
    364646 5jqu:F (2.162) BS01 FDE 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 27575374
    364647 5jqu:G (2.162) BS01 FDE 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 27575374
    364648 5jqu:H (2.162) BS01 FDE 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 27575374
    364649 5jqv:A (2.34) BS01 FDE 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 27575374
    364650 5jqv:B (2.34) BS01 FDE 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 27575374
    364651 5jqv:C (2.34) BS01 FDE 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 27575374
    364652 5jqv:D (2.34) BS01 FDE 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 27575374
    364653 5jqv:E (2.34) BS01 FDE 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 27575374
    364654 5jqv:F (2.34) BS01 FDE 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 27575374
    364655 5jqv:G (2.34) BS01 FDE 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 27575374
    364656 5jqv:H (2.34) BS01 FDE 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 27575374
    364657 5jqw:A (2.06) BS01 ADP 6.3.4.18 GO:0004638 ... Q5NGE8 N/A
    364658 5jqy:A (1.99) BS01 peptide 1.14.11.16 GO:0018193 ... Q12797 31659163
    364659 5jqy:A (1.99) BS02 MN 1.14.11.16 GO:0018193 ... Q12797 31659163
    364660 5jr1:H (1.601) BS01 ZN N/A N/A N/A 27299673
    364661 5jr2:A (1.75) BS01 peptide 2.7.10.1 N/A P54764 27660688
    364662 5jr2:B (1.75) BS01 peptide 2.7.10.1 N/A P54764 27660688
    364663 5jr2:C (1.75) BS01 peptide 2.7.10.1 N/A P54764 27660688
    364664 5jr2:D (1.75) BS01 peptide 2.7.10.1 N/A P54764 27660688
    364665 5jr3:A (1.84) BS01 SAH 2.1.1.292 GO:0003824 ... Q06528 N/A
    364666 5jr3:A (1.84) BS02 4MU 2.1.1.292 GO:0003824 ... Q06528 N/A
    364667 5jr3:B (1.84) BS01 SAH 2.1.1.292 GO:0003824 ... Q06528 N/A
    364668 5jr3:B (1.84) BS02 4MU 2.1.1.292 GO:0003824 ... Q06528 N/A
    364669 5jr3:C (1.84) BS01 SAH 2.1.1.292 GO:0003824 ... Q06528 N/A
    364670 5jr3:C (1.84) BS02 4MU 2.1.1.292 GO:0003824 ... Q06528 N/A
    364671 5jr4:A (2.596) BS01 peptide ? GO:0007155 ... Q1R2J4 28246638
    364672 5jr5:B (1.9) BS01 PS9 ? N/A Q54436 28905430
    364673 5jr5:D (1.9) BS01 PS9 ? N/A Q54436 28905430
    364674 5jr6:A (2.3) BS01 peptide 3.4.11.9 GO:0070006 ... A0A144A2H0 27462122
    364675 5jr6:A (2.3) BS02 MN 3.4.11.9 GO:0070006 ... A0A144A2H0 27462122
    364676 5jr6:A (2.3) BS03 MN 3.4.11.9 GO:0070006 ... A0A144A2H0 27462122
    364677 5jr6:B (2.3) BS01 MN 3.4.11.9 GO:0070006 ... A0A144A2H0 27462122
    364678 5jr6:B (2.3) BS02 MN 3.4.11.9 GO:0070006 ... A0A144A2H0 27462122
    364679 5jr7:A (3.56) BS01 ADP 2.7.11.11 GO:0000122 ... P05132 27825928
    364680 5jr7:C (3.56) BS01 ADP 2.7.11.11 GO:0000122 ... P05132 27825928
    364681 5jra:A (1.38) BS01 HEC ? GO:0005506 ... P00138 28451315
    364682 5jra:A (1.38) BS02 ASC ? GO:0005506 ... P00138 28451315
    364683 5jrc:A (1.9) BS01 CA ? GO:0043565 ... Q74ML9 27596600
    364684 5jrc:C (1.9) BS01 rna ? GO:0043565 ... Q74ML9 27596600
    364685 5jrc:C (1.9) BS02 CA ? GO:0043565 ... Q74ML9 27596600
    364686 5jrc:C (1.9) BS03 CA ? GO:0043565 ... Q74ML9 27596600
    364687 5jrc:D (1.9) BS01 CA ? GO:0043565 ... Q74ML9 27596600
    364688 5jrd:L (1.2) BS01 FCO 1.12.99.6 GO:0005515 ... P0ACD8 28001048
    364689 5jrd:L (1.2) BS02 MG 1.12.99.6 GO:0005515 ... P0ACD8 28001048
    364690 5jrd:M (1.2) BS01 FCO 1.12.99.6 GO:0005515 ... P0ACD8 28001048
    364691 5jrd:M (1.2) BS02 MG 1.12.99.6 GO:0005515 ... P0ACD8 28001048
    364692 5jrd:S (1.2) BS01 SF4 1.12.99.6 GO:0005886 ... P69740 28001048
    364693 5jrd:S (1.2) BS02 F3S 1.12.99.6 GO:0005886 ... P69740 28001048
    364694 5jrd:S (1.2) BS03 SF3 1.12.99.6 GO:0005886 ... P69740 28001048
    364695 5jrd:T (1.2) BS01 SF4 1.12.99.6 GO:0005886 ... P69740 28001048
    364696 5jrd:T (1.2) BS02 F3S 1.12.99.6 GO:0005886 ... P69740 28001048
    364697 5jrd:T (1.2) BS03 SF3 1.12.99.6 GO:0005886 ... P69740 28001048
    364698 5jre:A (2.1) BS01 ADE ? GO:0043565 ... Q74ML9 27596600
    364699 5jre:B (2.1) BS01 ADE ? GO:0043565 ... Q74ML9 27596600
    364700 5jre:C (2.1) BS01 ADZ ? GO:0043565 ... Q74ML9 27596600
    364701 5jre:D (2.1) BS01 dna ? GO:0043565 ... Q74ML9 27596600
    364702 5jre:D (2.1) BS02 dna ? GO:0043565 ... Q74ML9 27596600
    364703 5jre:D (2.1) BS03 ADE ? GO:0043565 ... Q74ML9 27596600
    364704 5jre:E (2.1) BS01 ADZ ? GO:0043565 ... Q74ML9 27596600
    364705 5jre:F (2.1) BS01 ADZ ? GO:0043565 ... Q74ML9 27596600
    364706 5jre:G (2.1) BS01 ADE ? GO:0043565 ... Q74ML9 27596600
    364707 5jre:H (2.1) BS01 dna ? GO:0043565 ... Q74ML9 27596600
    364708 5jre:H (2.1) BS02 dna ? GO:0043565 ... Q74ML9 27596600
    364709 5jre:H (2.1) BS03 ADE ? GO:0043565 ... Q74ML9 27596600
    364710 5jrg:A (2.5) BS01 dna ? GO:0000786 ... P68431 28139742
    364711 5jrg:A (2.5) BS02 dna ? GO:0000786 ... P68431 28139742
    364712 5jrg:B (2.5) BS01 dna ? GO:0000781 ... P62805 28139742
    364713 5jrg:B (2.5) BS02 dna ? GO:0000781 ... P62805 28139742
    364714 5jrg:C (2.5) BS01 dna ? GO:0000786 ... P04908 28139742
    364715 5jrg:C (2.5) BS02 dna ? GO:0000786 ... P04908 28139742
    364716 5jrg:D (2.5) BS01 dna ? GO:0000786 ... P06899 28139742
    364717 5jrg:D (2.5) BS02 dna ? GO:0000786 ... P06899 28139742
    364718 5jrg:E (2.5) BS01 dna ? GO:0000786 ... P68431 28139742
    364719 5jrg:E (2.5) BS02 dna ? GO:0000786 ... P68431 28139742
    364720 5jrg:F (2.5) BS01 dna ? GO:0000781 ... P62805 28139742
    364721 5jrg:F (2.5) BS02 dna ? GO:0000781 ... P62805 28139742
    364722 5jrg:G (2.5) BS01 dna ? GO:0000786 ... P04908 28139742
    364723 5jrg:G (2.5) BS02 dna ? GO:0000786 ... P04908 28139742
    364724 5jrg:H (2.5) BS01 dna ? GO:0000786 ... P06899 28139742
    364725 5jrg:H (2.5) BS02 dna ? GO:0000786 ... P06899 28139742
    364726 5jrh:A (1.644) BS01 COA 6.2.1.1 GO:0003987 ... Q8ZKF6 27974467
    364727 5jrh:A (1.644) BS02 CMP 6.2.1.1 GO:0003987 ... Q8ZKF6 27974467
    364728 5jrh:A (1.644) BS03 MG 6.2.1.1 GO:0003987 ... Q8ZKF6 27974467
    364729 5jrh:A (1.644) BS04 BU3 6.2.1.1 GO:0003987 ... Q8ZKF6 27974467
    364730 5jrh:A (1.644) BS05 BU3 6.2.1.1 GO:0003987 ... Q8ZKF6 27974467
    364731 5jrh:B (1.644) BS01 COA 6.2.1.1 GO:0003987 ... Q8ZKF6 27974467
    364732 5jrh:B (1.644) BS02 CMP 6.2.1.1 GO:0003987 ... Q8ZKF6 27974467
    364733 5jrh:B (1.644) BS03 MG 6.2.1.1 GO:0003987 ... Q8ZKF6 27974467
    364734 5jrh:B (1.644) BS04 BU3 6.2.1.1 GO:0003987 ... Q8ZKF6 27974467
    364735 5jrh:B (1.644) BS05 BU3 6.2.1.1 GO:0003987 ... Q8ZKF6 27974467
    364736 5jri:A (1.952) BS01 FAD ? GO:0000166 ... P74746 29133410
    364737 5jri:A (1.952) BS02 FAD ? GO:0000166 ... P74746 29133410
    364738 5jri:B (1.952) BS01 FAD ? GO:0000166 ... P74746 29133410
    364739 5jri:B (1.952) BS02 FAD ? GO:0000166 ... P74746 29133410
    364740 5jrj:A (1.7) BS01 ADP ? GO:0003677 ... D8IYL4 27447485
    364741 5jrj:A (1.7) BS02 ATP ? GO:0003677 ... D8IYL4 27447485
    364742 5jrj:A (1.7) BS03 CA ? GO:0003677 ... D8IYL4 27447485
    364743 5jrk:A (3.0) BS01 BGC ? GO:0006508 ... Q1GQ33 27611791
    364744 5jrk:B (3.0) BS01 BGC ? GO:0006508 ... Q1GQ33 27611791
    364745 5jrn:A (2.841) BS01 6MJ 3.2.1.8 GO:0004553 ... X0M5X0 27602054
    364746 5jrq:A (2.287) BS01 6N9 2.7.11.1 GO:0004672 ... P15056 27571413
    364747 5jrq:B (2.287) BS01 6N9 2.7.11.1 GO:0004672 ... P15056 27571413
    364748 5jrr:A (1.9) BS01 CU 1.10.3.2 GO:0005507 ... Q72HW2 N/A
    364749 5jrr:A (1.9) BS02 CU 1.10.3.2 GO:0005507 ... Q72HW2 N/A
    364750 5jrr:A (1.9) BS03 CU 1.10.3.2 GO:0005507 ... Q72HW2 N/A
    364751 5jrr:A (1.9) BS04 CU 1.10.3.2 GO:0005507 ... Q72HW2 N/A
    364752 5jrr:A (1.9) BS05 OXY 1.10.3.2 GO:0005507 ... Q72HW2 N/A
    364753 5jrs:A (1.97) BS01 6MV 2.7.10.2 GO:0004672 ... Q06187 27531604 MOAD: ic50=4nM
    BindingDB: IC50=30nM
    364754 5jrs:B (1.97) BS01 6MV 2.7.10.2 GO:0004672 ... Q06187 27531604 MOAD: ic50=4nM
    BindingDB: IC50=30nM
    364755 5jru:A (2.305) BS01 HEM ? GO:0020037 ... Q8RBX6 27328180
    364756 5jru:B (2.305) BS01 HEM ? GO:0020037 ... Q8RBX6 27328180
    364757 5jru:C (2.305) BS01 HEM ? GO:0020037 ... Q8RBX6 27328180
    364758 5jru:D (2.305) BS01 HEM ? GO:0020037 ... Q8RBX6 27328180
    364759 5jru:E (2.305) BS01 HEM ? GO:0020037 ... Q8RBX6 27328180
    364760 5jru:F (2.305) BS01 HEM ? GO:0020037 ... Q8RBX6 27328180
    364761 5jrv:A (1.953) BS01 HEM ? GO:0020037 ... Q8RBX6 27328180
    364762 5jrv:A (1.953) BS02 NO ? GO:0020037 ... Q8RBX6 27328180
    364763 5jrv:B (1.953) BS01 HEM ? GO:0020037 ... Q8RBX6 27328180
    364764 5jrv:B (1.953) BS02 NO ? GO:0020037 ... Q8RBX6 27328180
    364765 5jrx:A (1.95) BS01 HEM ? GO:0020037 ... Q8RBX6 27328180
    364766 5jrx:B (1.95) BS01 HEM ? GO:0020037 ... Q8RBX6 27328180
    364767 5jry:A (1.2) BS01 NDP 1.2.1.- GO:0000166 ... A0A0H3KPC8 N/A
    364768 5jrz:A (1.62) BS01 POP 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004386 ... Q32ZE1 27399257
    364769 5js1:A (2.499) BS01 rna 3.1.26.n2 GO:0000340 ... Q9UKV8 27380263
    364770 5js1:A (2.499) BS02 MG 3.1.26.n2 GO:0000340 ... Q9UKV8 27380263
    364771 5js2:A (2.954) BS01 rna 3.1.26.n2 GO:0000340 ... Q9UKV8 27380263
    364772 5js2:A (2.954) BS02 MG 3.1.26.n2 GO:0000340 ... Q9UKV8 27380263
    364773 5js3:E (1.16) BS01 ZN 3.4.24.27 GO:0004222 ... P00800 27933956
    364774 5js3:E (1.16) BS02 CA 3.4.24.27 GO:0004222 ... P00800 27933956
    364775 5js3:E (1.16) BS03 CA 3.4.24.27 GO:0004222 ... P00800 27933956
    364776 5js3:E (1.16) BS04 CA 3.4.24.27 GO:0004222 ... P00800 27933956
    364777 5js3:E (1.16) BS05 CA 3.4.24.27 GO:0004222 ... P00800 27933956
    364778 5js3:E (1.16) BS06 6MG 3.4.24.27 GO:0004222 ... P00800 27933956 MOAD: Kd=0.185uM
    364779 5js5:A (1.7) BS01 HEC ? GO:0005506 ... P00138 28451315
    364780 5js5:A (1.7) BS02 ASC ? GO:0005506 ... P00138 28451315
    364781 5js6:A (2.002) BS01 NAD 1.1.1.62 GO:0004303 ... Q9BPX1 27362750
    364782 5js9:A (6.918) BS01 MAN N/A N/A N/A 27349805
    364783 5js9:A (6.918) BS02 MAN N/A N/A N/A 27349805
    364784 5js9:A (6.918) BS03 BMA N/A N/A N/A 27349805
    364785 5js9:B (6.918) BS01 MAN N/A N/A N/A 27349805
    364786 5js9:E (6.918) BS01 BMA N/A N/A N/A 27349805
    364787 5js9:E (6.918) BS02 MAN N/A N/A N/A 27349805
    364788 5js9:E (6.918) BS03 MAN N/A N/A N/A 27349805
    364789 5js9:E (6.918) BS04 MAN N/A N/A N/A 27349805
    364790 5jsa:A (6.308) BS01 MAN N/A N/A N/A 27349805
    364791 5jsa:A (6.308) BS02 MAN N/A N/A N/A 27349805
    364792 5jsa:B (6.308) BS01 MAN N/A N/A N/A 27349805
    364793 5jsa:E (6.308) BS01 BMA N/A N/A N/A 27349805
    364794 5jsa:E (6.308) BS02 MAN N/A N/A N/A 27349805
    364795 5jsa:E (6.308) BS03 MAN N/A N/A N/A 27349805
    364796 5jsa:E (6.308) BS04 MAN N/A N/A N/A 27349805
    364797 5jsa:E (6.308) BS05 MAN N/A N/A N/A 27349805
    364798 5jsc:A (1.5) BS01 FAD 1.3.8.- GO:0000166 ... Q13JS1 N/A
    364799 5jsc:A (1.5) BS02 FAD 1.3.8.- GO:0000166 ... Q13JS1 N/A
    364800 5jsc:B (1.5) BS01 FAD 1.3.8.- GO:0000166 ... Q13JS1 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).