SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    365001 5jte:BZ (3.6) BS01 rna ? GO:0000027 ... P0AG51 27380950
    365002 5jte:BZ (3.6) BS02 rna ? GO:0000027 ... P0AG51 27380950
    365003 5jtg:E (3.05) BS01 MG ? GO:0000287 ... Q9WZ31 N/A
    365004 5jth:A (1.84) BS01 peptide ? GO:0000086 ... P0DP23 N/A
    365005 5jth:A (1.84) BS02 CA ? GO:0000086 ... P0DP23 N/A
    365006 5jth:A (1.84) BS03 CA ? GO:0000086 ... P0DP23 N/A
    365007 5jth:A (1.84) BS04 CA ? GO:0000086 ... P0DP23 N/A
    365008 5jth:A (1.84) BS05 CA ? GO:0000086 ... P0DP23 N/A
    365009 5jtm:A (-1.00) BS01 peptide ? GO:0005515 ... P0AG86 27501151
    365010 5jtm:A (-1.00) BS02 peptide ? GO:0005515 ... P0AG86 27501151
    365011 5jtm:B (-1.00) BS01 peptide ? GO:0005515 ... P0AG86 27501151
    365012 5jtm:C (-1.00) BS01 peptide ? GO:0005515 ... P0AG86 27501151
    365013 5jtm:D (-1.00) BS01 peptide ? GO:0005515 ... P0AG86 27501151
    365014 5jtp:A (-1.00) BS01 peptide ? GO:0005515 ... P0AG86 27501151
    365015 5jtp:B (-1.00) BS01 peptide ? GO:0005515 ... P0AG86 27501151
    365016 5jtp:C (-1.00) BS01 peptide ? GO:0005515 ... P0AG86 27501151
    365017 5jtp:D (-1.00) BS01 peptide ? GO:0005515 ... P0AG86 27501151
    365018 5jtt:A (1.85) BS01 PLP 2.4.1.1 GO:0000166 ... P00489 27522507
    365019 5jtt:A (1.85) BS02 6MY 2.4.1.1 GO:0000166 ... P00489 27522507 MOAD: Ki=0.28uM
    365020 5jtu:A (1.85) BS01 PLP 2.4.1.1 GO:0000166 ... P00489 27522507
    365021 5jtu:A (1.85) BS02 6NE 2.4.1.1 GO:0000166 ... P00489 27522507 MOAD: Ki=0.031uM
    365022 5jty:A (2.72) BS01 2JK ? GO:0015276 ... P35439 27618671
    365023 5jty:A (2.72) BS02 6ND ? GO:0015276 ... P35439 27618671
    365024 5jty:B (2.72) BS01 6ND ? GO:0015276 ... Q00959 27618671
    365025 5jty:B (2.72) BS02 GLU ? GO:0015276 ... Q00959 27618671
    365026 5ju6:A (2.2) BS01 BMA 3.2.1.21 GO:0004553 ... Q8TGI8 27377383
    365027 5ju6:A (2.2) BS02 MAN 3.2.1.21 GO:0004553 ... Q8TGI8 27377383
    365028 5ju6:A (2.2) BS03 MAN 3.2.1.21 GO:0004553 ... Q8TGI8 27377383
    365029 5ju6:A (2.2) BS04 BGC 3.2.1.21 GO:0004553 ... Q8TGI8 27377383
    365030 5ju6:B (2.2) BS01 MAN 3.2.1.21 GO:0004553 ... Q8TGI8 27377383
    365031 5ju6:B (2.2) BS02 MAN 3.2.1.21 GO:0004553 ... Q8TGI8 27377383
    365032 5ju6:B (2.2) BS03 BGC 3.2.1.21 GO:0004553 ... Q8TGI8 27377383
    365033 5ju6:C (2.2) BS01 BMA 3.2.1.21 GO:0004553 ... Q8TGI8 27377383
    365034 5ju6:C (2.2) BS02 MAN 3.2.1.21 GO:0004553 ... Q8TGI8 27377383
    365035 5ju6:C (2.2) BS03 MAN 3.2.1.21 GO:0004553 ... Q8TGI8 27377383
    365036 5ju6:C (2.2) BS04 MAN 3.2.1.21 GO:0004553 ... Q8TGI8 27377383
    365037 5ju6:C (2.2) BS05 BGC 3.2.1.21 GO:0004553 ... Q8TGI8 27377383
    365038 5ju6:D (2.2) BS01 BMA 3.2.1.21 GO:0004553 ... Q8TGI8 27377383
    365039 5ju6:D (2.2) BS02 MAN 3.2.1.21 GO:0004553 ... Q8TGI8 27377383
    365040 5ju6:D (2.2) BS03 MAN 3.2.1.21 GO:0004553 ... Q8TGI8 27377383
    365041 5ju6:D (2.2) BS04 MAN 3.2.1.21 GO:0004553 ... Q8TGI8 27377383
    365042 5ju6:D (2.2) BS05 BGC 3.2.1.21 GO:0004553 ... Q8TGI8 27377383
    365043 5ju7:A (2.05) BS01 ZN ? GO:0000160 ... P23890 28432336
    365044 5ju7:A (2.05) BS02 ZN ? GO:0000160 ... P23890 28432336
    365045 5ju7:A (2.05) BS03 ZN ? GO:0000160 ... P23890 28432336
    365046 5ju7:A (2.05) BS04 ZN ? GO:0000160 ... P23890 28432336
    365047 5ju8:AB (3.6) BS01 rna ? GO:0000028 ... P0A7V0 27380950
    365048 5ju8:AC (3.6) BS01 rna ? GO:0000028 ... P0A7V3 27380950
    365049 5ju8:AD (3.6) BS01 rna ? GO:0000028 ... P0A7V8 27380950
    365050 5ju8:AE (3.6) BS01 rna ? GO:0000028 ... P0A7W1 27380950
    365051 5ju8:AF (3.6) BS01 rna ? GO:0002181 ... P02358 27380950
    365052 5ju8:AG (3.6) BS01 rna ? GO:0000028 ... P02359 27380950
    365053 5ju8:AG (3.6) BS02 rna ? GO:0000028 ... P02359 27380950
    365054 5ju8:AH (3.6) BS01 rna ? GO:0000028 ... P0A7W7 27380950
    365055 5ju8:AI (3.6) BS01 rna ? GO:0000049 ... P0A7X3 27380950
    365056 5ju8:AJ (3.6) BS01 rna ? GO:0000049 ... P0A7R5 27380950
    365057 5ju8:AK (3.6) BS01 rna ? GO:0002181 ... P0A7R9 27380950
    365058 5ju8:AL (3.6) BS01 rna ? GO:0000049 ... P0A7S3 27380950
    365059 5ju8:AM (3.6) BS01 rna ? GO:0000049 ... P0A7S9 27380950
    365060 5ju8:AN (3.6) BS01 rna ? GO:0003735 ... P0AG59 27380950
    365061 5ju8:AO (3.6) BS01 rna ? GO:0000028 ... P0ADZ4 27380950
    365062 5ju8:AO (3.6) BS02 rna ? GO:0000028 ... P0ADZ4 27380950
    365063 5ju8:AP (3.6) BS01 rna ? GO:0000028 ... P0A7T3 27380950
    365064 5ju8:AQ (3.6) BS01 rna ? GO:0000028 ... P0AG63 27380950
    365065 5ju8:AR (3.6) BS01 rna ? GO:0002181 ... P0A7T7 27380950
    365066 5ju8:AS (3.6) BS01 rna ? GO:0000028 ... P0A7U3 27380950
    365067 5ju8:AT (3.6) BS01 rna ? GO:0000028 ... P0A7U7 27380950
    365068 5ju8:AU (3.6) BS01 rna ? GO:0000028 ... P68679 27380950
    365069 5ju8:B0 (3.6) BS01 rna ? GO:0000027 ... P0A7N4 27380950
    365070 5ju8:B1 (3.6) BS01 rna ? GO:0000027 ... P0A7N9 27380950
    365071 5ju8:B2 (3.6) BS01 rna ? GO:0002181 ... P0A7P5 27380950
    365072 5ju8:B3 (3.6) BS01 rna ? GO:0002181 ... P0A7Q1 27380950
    365073 5ju8:B4 (3.6) BS01 rna ? GO:0002181 ... P0A7Q6 27380950
    365074 5ju8:BC (3.6) BS01 rna ? GO:0000027 ... P60422 27380950
    365075 5ju8:BC (3.6) BS02 rna ? GO:0000027 ... P60422 27380950
    365076 5ju8:BD (3.6) BS01 rna ? GO:0000027 ... P60438 27380950
    365077 5ju8:BE (3.6) BS01 rna ? GO:0001070 ... P60723 27380950
    365078 5ju8:BF (3.6) BS01 rna ? GO:0000027 ... P62399 27380950
    365079 5ju8:BF (3.6) BS02 rna ? GO:0000027 ... P62399 27380950
    365080 5ju8:BF (3.6) BS03 rna ? GO:0000027 ... P62399 27380950
    365081 5ju8:BG (3.6) BS01 rna ? GO:0000027 ... P0AG55 27380950
    365082 5ju8:BH (3.6) BS01 rna ? GO:0002181 ... P0A7R1 27380950
    365083 5ju8:BI (3.6) BS01 rna ? GO:0000027 ... P0A7J7 27380950
    365084 5ju8:BJ (3.6) BS01 rna ? GO:0002181 ... P0AA10 27380950
    365085 5ju8:BK (3.6) BS01 rna ? GO:0002181 ... P0ADY3 27380950
    365086 5ju8:BK (3.6) BS02 rna ? GO:0002181 ... P0ADY3 27380950
    365087 5ju8:BL (3.6) BS01 rna ? GO:0002181 ... P02413 27380950
    365088 5ju8:BM (3.6) BS01 rna ? GO:0000027 ... P0ADY7 27380950
    365089 5ju8:BM (3.6) BS02 rna ? GO:0000027 ... P0ADY7 27380950
    365090 5ju8:BN (3.6) BS01 rna ? GO:0000027 ... P0AG44 27380950
    365091 5ju8:BO (3.6) BS01 rna ? GO:0002181 ... P0C018 27380950
    365092 5ju8:BO (3.6) BS02 rna ? GO:0002181 ... P0C018 27380950
    365093 5ju8:BP (3.6) BS01 rna ? GO:0000027 ... P0A7K6 27380950
    365094 5ju8:BP (3.6) BS02 rna ? GO:0000027 ... P0A7K6 27380950
    365095 5ju8:BQ (3.6) BS01 rna ? GO:0000027 ... P0A7L3 27380950
    365096 5ju8:BR (3.6) BS01 rna ? GO:0002181 ... P0AG48 27380950
    365097 5ju8:BS (3.6) BS01 rna ? GO:0002181 ... P61175 27380950
    365098 5ju8:BT (3.6) BS01 rna ? GO:0000027 ... P0ADZ0 27380950
    365099 5ju8:BU (3.6) BS01 rna ? GO:0000027 ... P60624 27380950
    365100 5ju8:BV (3.6) BS01 rna ? GO:0000027 ... P68919 27380950
    365101 5ju8:BW (3.6) BS01 rna ? GO:0000027 ... P0A7L8 27380950
    365102 5ju8:BW (3.6) BS02 rna ? GO:0000027 ... P0A7L8 27380950
    365103 5ju8:BX (3.6) BS01 rna ? GO:0000027 ... P0A7M2 27380950
    365104 5ju8:BY (3.6) BS01 rna ? GO:0000027 ... P0A7M6 27380950
    365105 5ju8:BZ (3.6) BS01 rna ? GO:0000027 ... P0AG51 27380950
    365106 5ju9:A (1.18) BS01 MAN 3.2.1.78 GO:0016985 ... A0A1L1QK13 28058278
    365107 5ju9:A (1.18) BS02 BMA 3.2.1.78 GO:0016985 ... A0A1L1QK13 28058278
    365108 5ju9:A (1.18) BS03 BMA 3.2.1.78 GO:0016985 ... A0A1L1QK13 28058278
    365109 5jua:A (1.13) BS01 HEC ? GO:0005506 ... P00138 28451315
    365110 5jua:A (1.13) BS02 NO ? GO:0005506 ... P00138 28451315
    365111 5jub:A (2.57) BS01 peptide ? GO:0003677 ... A0A1L1QK15 27907189
    365112 5jub:A (2.57) BS02 dna ? GO:0003677 ... A0A1L1QK15 27907189
    365113 5jub:A (2.57) BS03 dna ? GO:0003677 ... A0A1L1QK15 27907189
    365114 5jub:B (2.57) BS01 peptide ? GO:0003677 ... A0A1L1QK15 27907189
    365115 5jub:B (2.57) BS02 dna ? GO:0003677 ... A0A1L1QK15 27907189
    365116 5jub:B (2.57) BS03 dna ? GO:0003677 ... A0A1L1QK15 27907189
    365117 5juc:A (2.8) BS01 UDP 2.4.1.266 GO:0000287 ... P9WMW9 28625787
    365118 5juc:A (2.8) BS02 MN 2.4.1.266 GO:0000287 ... P9WMW9 28625787
    365119 5juc:A (2.8) BS03 XDX 2.4.1.266 GO:0000287 ... P9WMW9 28625787
    365120 5jud:A (2.59) BS01 UDP 2.4.1.266 GO:0016757 ... Q7U0E1 28625787
    365121 5jug:A (0.96) BS01 BMA 3.2.1.78 GO:0016985 ... A0A1L1QK16 28058278
    365122 5jug:A (0.96) BS02 BMA 3.2.1.78 GO:0016985 ... A0A1L1QK16 28058278
    365123 5jug:A (0.96) BS03 BMA 3.2.1.78 GO:0016985 ... A0A1L1QK16 28058278
    365124 5jug:A (0.96) BS04 BMA 3.2.1.78 GO:0016985 ... A0A1L1QK16 28058278
    365125 5jug:A (0.96) BS05 BMA 3.2.1.78 GO:0016985 ... A0A1L1QK16 28058278
    365126 5jug:A (0.96) BS06 MAN 3.2.1.78 GO:0016985 ... A0A1L1QK16 28058278
    365127 5juh:A (1.35) BS01 CA ? N/A A1YIY3 28808685
    365128 5juh:A (1.35) BS02 CA ? N/A A1YIY3 28808685
    365129 5juh:A (1.35) BS03 CA ? N/A A1YIY3 28808685
    365130 5juh:A (1.35) BS04 CA ? N/A A1YIY3 28808685
    365131 5juh:A (1.35) BS05 CA ? N/A A1YIY3 28808685
    365132 5juh:A (1.35) BS06 CA ? N/A A1YIY3 28808685
    365133 5juh:A (1.35) BS07 CA ? N/A A1YIY3 28808685
    365134 5jul:A (4.4) BS01 DTP ? GO:0002921 ... Q7KLI1 27916517
    365135 5jul:B (4.4) BS01 DTP ? GO:0002921 ... Q7KLI1 27916517
    365136 5jul:C (4.4) BS01 DTP ? GO:0002921 ... Q7KLI1 27916517
    365137 5jul:D (4.4) BS01 DTP ? GO:0002921 ... Q7KLI1 27916517
    365138 5jul:E (4.4) BS01 DTP ? GO:0002921 ... Q7KLI1 27916517
    365139 5jul:F (4.4) BS01 DTP ? GO:0002921 ... Q7KLI1 27916517
    365140 5jul:G (4.4) BS01 DTP ? GO:0002921 ... Q7KLI1 27916517
    365141 5jul:H (4.4) BS01 DTP ? GO:0002921 ... Q7KLI1 27916517
    365142 5jul:I (4.4) BS01 DTP ? GO:0002921 ... Q7KLI1 27916517
    365143 5jul:J (4.4) BS01 DTP ? GO:0002921 ... Q7KLI1 27916517
    365144 5jul:K (4.4) BS01 DTP ? GO:0002921 ... Q7KLI1 27916517
    365145 5jul:L (4.4) BS01 DTP ? GO:0002921 ... Q7KLI1 27916517
    365146 5jul:M (4.4) BS01 DTP ? GO:0002921 ... Q7KLI1 27916517
    365147 5jul:N (4.4) BS01 DTP ? GO:0002921 ... Q7KLI1 27916517
    365148 5jul:O (4.4) BS01 DTP ? GO:0002921 ... Q7KLI1 27916517
    365149 5jul:P (4.4) BS01 DTP ? GO:0002921 ... Q7KLI1 27916517
    365150 5jum:A (2.6) BS01 dna 2.7.7.7 GO:0003684 ... Q9Y253 27556902
    365151 5jum:A (2.6) BS02 dna 2.7.7.7 GO:0003684 ... Q9Y253 27556902
    365152 5jum:A (2.6) BS03 DCP 2.7.7.7 GO:0003684 ... Q9Y253 27556902
    365153 5jum:A (2.6) BS04 CA 2.7.7.7 GO:0003684 ... Q9Y253 27556902
    365154 5jum:A (2.6) BS05 CA 2.7.7.7 GO:0003684 ... Q9Y253 27556902
    365155 5jun:A (2.69) BS01 6NU ? N/A Q30NP1 28197322
    365156 5juo:AA (4.0) BS01 rna ? GO:0002181 ... P0CX41 27159452
    365157 5juo:AA (4.0) BS02 rna ? GO:0002181 ... P0CX41 27159452
    365158 5juo:AB (4.0) BS01 rna ? GO:0000054 ... P05750 27159452
    365159 5juo:AC (4.0) BS01 rna ? GO:0002181 ... P41057 27159452
    365160 5juo:BA (4.0) BS01 rna ? GO:0002181 ... P04449 27159452
    365161 5juo:BB (4.0) BS01 rna ? GO:0002181 ... P0CX35 27159452
    365162 5juo:BC (4.0) BS01 rna ? GO:0002181 ... P0CX33 27159452
    365163 5juo:CA (4.0) BS01 rna ? GO:0000027 ... P04456 27159452
    365164 5juo:CA (4.0) BS02 rna ? GO:0000027 ... P04456 27159452
    365165 5juo:CB (4.0) BS01 rna ? GO:0000028 ... P26783 27159452
    365166 5juo:CC (4.0) BS01 rna ? GO:0000028 ... P05759 27159452
    365167 5juo:DA (4.0) BS01 rna ? GO:0002181 ... P05743 27159452
    365168 5juo:DA (4.0) BS02 rna ? GO:0002181 ... P05743 27159452
    365169 5juo:DB (4.0) BS01 rna ? GO:0000462 ... P0CX37 27159452
    365170 5juo:DC (4.0) BS01 rna 3.6.5.- GO:0003746 ... P32324 27159452
    365171 5juo:DC (4.0) BS02 rna 3.6.5.- GO:0003746 ... P32324 27159452
    365172 5juo:DC (4.0) BS03 rna 3.6.5.- GO:0003746 ... P32324 27159452
    365173 5juo:DC (4.0) BS04 GDP 3.6.5.- GO:0003746 ... P32324 27159452
    365174 5juo:DC (4.0) BS05 SO1 3.6.5.- GO:0003746 ... P32324 27159452
    365175 5juo:E (4.0) BS01 rna ? GO:0000055 ... P0CX43 27159452
    365176 5juo:E (4.0) BS02 rna ? GO:0000055 ... P0CX43 27159452
    365177 5juo:EA (4.0) BS01 rna ? GO:0002181 ... P0C2H6 27159452
    365178 5juo:EB (4.0) BS01 rna ? GO:0002181 ... P26786 27159452
    365179 5juo:F (4.0) BS01 rna ? GO:0002181 ... P0CX45 27159452
    365180 5juo:F (4.0) BS02 rna ? GO:0002181 ... P0CX45 27159452
    365181 5juo:FA (4.0) BS01 rna ? GO:0002181 ... P02406 27159452
    365182 5juo:FB (4.0) BS01 rna ? GO:0000462 ... P0CX39 27159452
    365183 5juo:G (4.0) BS01 rna ? GO:0000027 ... P14126 27159452
    365184 5juo:GA (4.0) BS01 rna ? GO:0002181 ... P05747 27159452
    365185 5juo:GB (4.0) BS01 rna ? GO:0000462 ... O13516 27159452
    365186 5juo:H (4.0) BS01 rna ? GO:0002181 ... P10664 27159452
    365187 5juo:H (4.0) BS02 rna ? GO:0002181 ... P10664 27159452
    365188 5juo:HA (4.0) BS01 rna ? GO:0002181 ... P14120 27159452
    365189 5juo:HB (4.0) BS01 rna ? GO:0000054 ... Q08745 27159452
    365190 5juo:I (4.0) BS01 rna ? GO:0000027 ... P26321 27159452
    365191 5juo:I (4.0) BS02 rna ? GO:0000027 ... P26321 27159452
    365192 5juo:IA (4.0) BS01 rna ? GO:0002181 ... P0C2H8 27159452
    365193 5juo:IB (4.0) BS01 rna ? GO:0000028 ... P0CX47 27159452
    365194 5juo:J (4.0) BS01 rna ? GO:0000027 ... Q02326 27159452
    365195 5juo:JA (4.0) BS01 rna ? GO:0002181 ... P38061 27159452
    365196 5juo:JB (4.0) BS01 rna ? GO:0000028 ... P48589 27159452
    365197 5juo:K (4.0) BS01 rna ? GO:0000463 ... P05737 27159452
    365198 5juo:K (4.0) BS02 rna ? GO:0000463 ... P05737 27159452
    365199 5juo:KA (4.0) BS01 rna ? GO:0000027 ... P05744 27159452
    365200 5juo:KB (4.0) BS01 rna ? GO:0000462 ... P05756 27159452

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).