SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    365601 5juu:F (4.0) BS02 rna ? GO:0002181 ... P0CX45 27159452
    365602 5juu:FA (4.0) BS01 rna ? GO:0002181 ... P02406 27159452
    365603 5juu:FB (4.0) BS01 rna ? GO:0000462 ... P0CX39 27159452
    365604 5juu:FB (4.0) BS02 rna ? GO:0000462 ... P0CX39 27159452
    365605 5juu:G (4.0) BS01 rna ? GO:0000027 ... P14126 27159452
    365606 5juu:GA (4.0) BS01 rna ? GO:0002181 ... P05747 27159452
    365607 5juu:GB (4.0) BS01 rna ? GO:0000462 ... O13516 27159452
    365608 5juu:H (4.0) BS01 rna ? GO:0002181 ... P10664 27159452
    365609 5juu:H (4.0) BS02 rna ? GO:0002181 ... P10664 27159452
    365610 5juu:HA (4.0) BS01 rna ? GO:0002181 ... P14120 27159452
    365611 5juu:HB (4.0) BS01 rna ? GO:0000054 ... Q08745 27159452
    365612 5juu:I (4.0) BS01 rna ? GO:0000027 ... P26321 27159452
    365613 5juu:I (4.0) BS02 rna ? GO:0000027 ... P26321 27159452
    365614 5juu:IA (4.0) BS01 rna ? GO:0002181 ... P0C2H8 27159452
    365615 5juu:IB (4.0) BS01 rna ? GO:0000028 ... P0CX47 27159452
    365616 5juu:J (4.0) BS01 rna ? GO:0000027 ... Q02326 27159452
    365617 5juu:JA (4.0) BS01 rna ? GO:0002181 ... P38061 27159452
    365618 5juu:JB (4.0) BS01 rna ? GO:0000028 ... P48589 27159452
    365619 5juu:K (4.0) BS01 rna ? GO:0000463 ... P05737 27159452
    365620 5juu:K (4.0) BS02 rna ? GO:0000463 ... P05737 27159452
    365621 5juu:KA (4.0) BS01 rna ? GO:0000027 ... P05744 27159452
    365622 5juu:KB (4.0) BS01 rna ? GO:0000462 ... P05756 27159452
    365623 5juu:L (4.0) BS01 rna ? GO:0000470 ... P17076 27159452
    365624 5juu:L (4.0) BS02 rna ? GO:0000470 ... P17076 27159452
    365625 5juu:LA (4.0) BS01 rna ? GO:0002181 ... P87262 27159452
    365626 5juu:LB (4.0) BS01 rna ? GO:0000028 ... P06367 27159452
    365627 5juu:M (4.0) BS01 rna ? GO:0002181 ... P05738 27159452
    365628 5juu:MA (4.0) BS01 rna ? GO:0000463 ... P0CX84 27159452
    365629 5juu:MA (4.0) BS02 rna ? GO:0000463 ... P0CX84 27159452
    365630 5juu:MB (4.0) BS01 rna ? GO:0000028 ... Q01855 27159452
    365631 5juu:N (4.0) BS01 rna ? GO:0000027 ... P41805 27159452
    365632 5juu:N (4.0) BS02 rna ? GO:0000027 ... P41805 27159452
    365633 5juu:NA (4.0) BS01 rna ? GO:0002181 ... P05745 27159452
    365634 5juu:NB (4.0) BS01 rna ? GO:0000462 ... P0CX51 27159452
    365635 5juu:O (4.0) BS01 rna ? GO:0000027 ... P0C0W9 27159452
    365636 5juu:O (4.0) BS02 rna ? GO:0000027 ... P0C0W9 27159452
    365637 5juu:OA (4.0) BS01 rna ? GO:0000448 ... P49166 27159452
    365638 5juu:OA (4.0) BS02 rna ? GO:0000448 ... P49166 27159452
    365639 5juu:OB (4.0) BS01 rna ? GO:0000028 ... P02407 27159452
    365640 5juu:P (4.0) BS01 rna ? GO:0000027 ... P0CX53 27159452
    365641 5juu:PA (4.0) BS01 rna ? GO:0002181 ... P49167 27159452
    365642 5juu:PB (4.0) BS01 rna ? GO:0000054 ... P0CX55 27159452
    365643 5juu:Q (4.0) BS01 rna ? GO:0002181 ... Q12690 27159452
    365644 5juu:Q (4.0) BS02 rna ? GO:0002181 ... Q12690 27159452
    365645 5juu:QA (4.0) BS01 rna ? GO:0002181 ... P04650 27159452
    365646 5juu:QA (4.0) BS02 rna ? GO:0002181 ... P04650 27159452
    365647 5juu:QB (4.0) BS01 rna ? GO:0000028 ... P07280 27159452
    365648 5juu:R (4.0) BS01 rna ? GO:0000027 ... P36105 27159452
    365649 5juu:RA (4.0) BS01 rna ? GO:0000027 ... P0CH08 27159452
    365650 5juu:RB (4.0) BS01 rna ? GO:0000462 ... P38701 27159452
    365651 5juu:S (4.0) BS01 rna ? GO:0002181 ... P05748 27159452
    365652 5juu:S (4.0) BS02 rna ? GO:0002181 ... P05748 27159452
    365653 5juu:SB (4.0) BS01 rna ? GO:0000447 ... P0C0V8 27159452
    365654 5juu:T (4.0) BS01 rna ? GO:0000470 ... P26784 27159452
    365655 5juu:TA (4.0) BS01 rna ? GO:0002181 ... P0CX27 27159452
    365656 5juu:TB (4.0) BS01 rna ? GO:0002181 ... P0C0W1 27159452
    365657 5juu:U (4.0) BS01 rna ? GO:0000448 ... P05740 27159452
    365658 5juu:U (4.0) BS02 rna ? GO:0000448 ... P05740 27159452
    365659 5juu:UA (4.0) BS01 rna ? GO:0002181 ... P0CX25 27159452
    365660 5juu:UB (4.0) BS01 rna ? GO:0000462 ... P0CX29 27159452
    365661 5juu:V (4.0) BS01 rna ? GO:0002181 ... P0CX49 27159452
    365662 5juu:VA (4.0) BS01 rna ? GO:0000027 ... P05317 27159452
    365663 5juu:VB (4.0) BS01 rna ? GO:0000462 ... P0CX31 27159452
    365664 5juu:W (4.0) BS01 rna ? GO:0002181 ... P0CX82 27159452
    365665 5juu:W (4.0) BS02 rna ? GO:0002181 ... P0CX82 27159452
    365666 5juu:WA (4.0) BS01 rna ? GO:0001965 ... P38011 27159452
    365667 5juu:WB (4.0) BS01 rna ? GO:0002181 ... Q3E792 27159452
    365668 5juu:X (4.0) BS01 rna ? GO:0002181 ... P0CX23 27159452
    365669 5juu:X (4.0) BS02 rna ? GO:0002181 ... P0CX23 27159452
    365670 5juu:XA (4.0) BS01 rna ? GO:0000028 ... P32905 27159452
    365671 5juu:XB (4.0) BS01 rna ? GO:0000054 ... P39938 27159452
    365672 5juu:Y (4.0) BS01 rna ? GO:0002181 ... Q02753 27159452
    365673 5juu:Y (4.0) BS02 rna ? GO:0002181 ... Q02753 27159452
    365674 5juu:YA (4.0) BS01 rna ? GO:0000462 ... P33442 27159452
    365675 5juu:YB (4.0) BS01 rna ? GO:0000028 ... P35997 27159452
    365676 5juu:Z (4.0) BS01 rna ? GO:0002181 ... P05749 27159452
    365677 5juu:ZA (4.0) BS01 rna ? GO:0000054 ... P25443 27159452
    365678 5juu:ZB (4.0) BS01 rna ? GO:0000028 ... Q3E7X9 27159452
    365679 5juv:A (2.27) BS01 MAN 3.2.1.23 GO:0004553 ... A2QAN3 28391618
    365680 5juv:A (2.27) BS02 MAN 3.2.1.23 GO:0004553 ... A2QAN3 28391618
    365681 5juv:A (2.27) BS03 MAN 3.2.1.23 GO:0004553 ... A2QAN3 28391618
    365682 5juv:A (2.27) BS04 MAN 3.2.1.23 GO:0004553 ... A2QAN3 28391618
    365683 5juv:A (2.27) BS05 GAL 3.2.1.23 GO:0004553 ... A2QAN3 28391618
    365684 5juv:A (2.27) BS06 GAL 3.2.1.23 GO:0004553 ... A2QAN3 28391618
    365685 5juw:A (2.28) BS01 6NR 2.1.1.360 GO:0031151 ... Q8TEK3 N/A BindingDB: IC50=26nM
    365686 5juy:A (4.1) BS01 DTP ? GO:0000166 ... O14727 27697150
    365687 5juy:B (4.1) BS01 DTP ? GO:0000166 ... O14727 27697150
    365688 5juy:C (4.1) BS01 DTP ? GO:0000166 ... O14727 27697150
    365689 5juy:D (4.1) BS01 DTP ? GO:0000166 ... O14727 27697150
    365690 5juy:E (4.1) BS01 DTP ? GO:0000166 ... O14727 27697150
    365691 5juy:F (4.1) BS01 DTP ? GO:0000166 ... O14727 27697150
    365692 5juy:G (4.1) BS01 DTP ? GO:0000166 ... O14727 27697150
    365693 5juy:H (4.1) BS01 HEC ? GO:0005739 ... P62894 27697150
    365694 5juy:I (4.1) BS01 HEC ? GO:0005739 ... P62894 27697150
    365695 5juy:J (4.1) BS01 HEC ? GO:0005739 ... P62894 27697150
    365696 5juy:K (4.1) BS01 HEC ? GO:0005739 ... P62894 27697150
    365697 5juy:L (4.1) BS01 HEC ? GO:0005739 ... P62894 27697150
    365698 5juy:M (4.1) BS01 HEC ? GO:0005739 ... P62894 27697150
    365699 5juy:N (4.1) BS01 HEC ? GO:0005739 ... P62894 27697150
    365700 5juz:F (2.4) BS01 YL4 2.5.1.1
    2.5.1.10
    GO:0004659 ... P14324 28208018 MOAD: ic50=3uM
    BindingDB: IC50=3000nM
    365701 5jv0:F (2.4) BS01 YL5 2.5.1.1
    2.5.1.10
    GO:0004659 ... P14324 28208018 MOAD: ic50=1.1uM
    BindingDB: IC50=1100nM
    365702 5jv0:F (2.4) BS02 YL5 2.5.1.1
    2.5.1.10
    GO:0004659 ... P14324 28208018 MOAD: ic50=1.1uM
    BindingDB: IC50=1100nM
    365703 5jv0:F (2.4) BS03 YL5 2.5.1.1
    2.5.1.10
    GO:0004659 ... P14324 28208018 MOAD: ic50=1.1uM
    BindingDB: IC50=1100nM
    365704 5jv1:F (2.3) BS01 YL6 2.5.1.1
    2.5.1.10
    GO:0004659 ... P14324 28208018 MOAD: ic50=0.86uM
    365705 5jv1:F (2.3) BS02 YL6 2.5.1.1
    2.5.1.10
    GO:0004659 ... P14324 28208018 MOAD: ic50=0.86uM
    365706 5jv2:F (2.3) BS01 PO4 2.5.1.1
    2.5.1.10
    GO:0004659 ... P14324 28208018
    365707 5jv2:F (2.3) BS02 6O3 2.5.1.1
    2.5.1.10
    GO:0004659 ... P14324 28208018 MOAD: ic50~100uM
    365708 5jv2:F (2.3) BS03 6O3 2.5.1.1
    2.5.1.10
    GO:0004659 ... P14324 28208018 MOAD: ic50~100uM
    365709 5jv4:A (1.7) BS01 F42 ? GO:0005829 ... A0R6F1 N/A
    365710 5jv4:A (1.7) BS02 F42 ? GO:0005829 ... A0R6F1 N/A
    365711 5jv4:B (1.7) BS01 F42 ? GO:0005829 ... A0R6F1 N/A
    365712 5jv4:B (1.7) BS02 F42 ? GO:0005829 ... A0R6F1 N/A
    365713 5jv4:C (1.7) BS01 F42 ? GO:0005829 ... A0R6F1 N/A
    365714 5jv4:C (1.7) BS02 F42 ? GO:0005829 ... A0R6F1 N/A
    365715 5jv4:D (1.7) BS01 F42 ? GO:0005829 ... A0R6F1 N/A
    365716 5jv4:D (1.7) BS02 F42 ? GO:0005829 ... A0R6F1 N/A
    365717 5jv4:E (1.7) BS01 F42 ? GO:0005829 ... A0R6F1 N/A
    365718 5jv4:E (1.7) BS02 F42 ? GO:0005829 ... A0R6F1 N/A
    365719 5jv4:F (1.7) BS01 F42 ? GO:0005829 ... A0R6F1 N/A
    365720 5jv4:F (1.7) BS02 F42 ? GO:0005829 ... A0R6F1 N/A
    365721 5jv5:A (2.73) BS01 5GP 2.4.2.8 GO:0000166 ... Q07010 27786284
    365722 5jv5:B (2.73) BS01 5GP 2.4.2.8 GO:0000166 ... Q07010 27786284
    365723 5jvb:A (1.95) BS01 2PO ? GO:0043190 ... Q119I9 29170493 MOAD: Kd=0.17uM
    365724 5jvb:B (1.95) BS01 2PO ? GO:0043190 ... Q119I9 29170493 MOAD: Kd=0.17uM
    365725 5jvd:A (2.393) BS01 GTP 3.6.5.- GO:0000226 ... P81947 27224920
    365726 5jvd:A (2.393) BS02 CA 3.6.5.- GO:0000226 ... P81947 27224920
    365727 5jvd:A (2.393) BS03 6NL 3.6.5.- GO:0000226 ... P81947 27224920
    365728 5jvd:B (2.393) BS01 6NL ? GO:0000226 ... Q6B856 27224920 MOAD: Ka=13000000M^-1
    365729 5jvd:B (2.393) BS02 GDP ? GO:0000226 ... Q6B856 27224920
    365730 5jvd:C (2.393) BS01 GTP 3.6.5.- GO:0000226 ... P81947 27224920
    365731 5jvd:C (2.393) BS02 CA 3.6.5.- GO:0000226 ... P81947 27224920
    365732 5jvd:C (2.393) BS03 6NL 3.6.5.- GO:0000226 ... P81947 27224920
    365733 5jvd:D (2.393) BS01 6NL ? GO:0000226 ... Q6B856 27224920 MOAD: Ka=13000000M^-1
    365734 5jvd:D (2.393) BS02 GDP ? GO:0000226 ... Q6B856 27224920
    365735 5jvd:F (2.393) BS01 MG N/A GO:0036211 ... N/A 27224920
    365736 5jvd:F (2.393) BS02 ACP N/A GO:0036211 ... N/A 27224920
    365737 5jve:A (1.12) BS01 HEC ? GO:0005506 ... P00138 28451315
    365738 5jvg:1 (3.428) BS01 rna ? GO:0000049 ... Q9RSS4 27791159
    365739 5jvg:2 (3.428) BS01 rna ? GO:0003735 ... Q9RSH2 27791159
    365740 5jvg:3 (3.428) BS01 rna ? GO:0003735 ... Q9RSW6 27791159
    365741 5jvg:A (3.428) BS01 rna ? GO:0002181 ... Q9RXJ9 27791159
    365742 5jvg:B (3.428) BS01 rna ? GO:0003735 ... Q9RXK2 27791159
    365743 5jvg:C (3.428) BS01 rna ? GO:0003735 ... Q9RXK1 27791159
    365744 5jvg:D (3.428) BS01 rna ? GO:0000049 ... Q9RXJ0 27791159
    365745 5jvg:D (3.428) BS02 rna ? GO:0000049 ... Q9RXJ0 27791159
    365746 5jvg:E (3.428) BS01 rna ? GO:0002181 ... Q9RSL3 27791159
    365747 5jvg:F (3.428) BS01 rna ? GO:0003735 ... Q9RSS7 27791159
    365748 5jvg:G (3.428) BS01 rna ? GO:0003729 ... Q9RXY1 27791159
    365749 5jvg:H (3.428) BS01 rna ? GO:0003735 ... Q9RXJ2 27791159
    365750 5jvg:I (3.428) BS01 rna ? GO:0003735 ... Q9RSK9 27791159
    365751 5jvg:J (3.428) BS01 rna ? GO:0000049 ... Q9RXJ5 27791159
    365752 5jvg:J (3.428) BS02 rna ? GO:0000049 ... Q9RXJ5 27791159
    365753 5jvg:J (3.428) BS03 6NO ? GO:0000049 ... Q9RXJ5 27791159
    365754 5jvg:K (3.428) BS01 rna ? GO:0003735 ... Q9RSJ5 27791159
    365755 5jvg:L (3.428) BS01 rna ? GO:0003735 ... Q9RSL2 27791159
    365756 5jvg:L (3.428) BS02 rna ? GO:0003735 ... Q9RSL2 27791159
    365757 5jvg:M (3.428) BS01 rna ? GO:0003735 ... Q9RWB4 27791159
    365758 5jvg:M (3.428) BS02 MG ? GO:0003735 ... Q9RWB4 27791159
    365759 5jvg:N (3.428) BS01 rna ? GO:0000027 ... Q9RSW7 27791159
    365760 5jvg:O (3.428) BS01 rna ? GO:0003723 ... Q9RY64 27791159
    365761 5jvg:P (3.428) BS01 rna ? GO:0003735 ... Q9RXJ7 27791159
    365762 5jvg:Q (3.428) BS01 rna ? GO:0003735 ... Q9RXK0 27791159
    365763 5jvg:Q (3.428) BS02 MG ? GO:0003735 ... Q9RXK0 27791159
    365764 5jvg:R (3.428) BS01 rna ? GO:0003723 ... Q9RXJ1 27791159
    365765 5jvg:S (3.428) BS01 rna ? GO:0000049 ... Q9RX88 27791159
    365766 5jvg:S (3.428) BS02 rna ? GO:0000049 ... Q9RX88 27791159
    365767 5jvg:T (3.428) BS01 rna ? GO:0000049 ... Q9RY65 27791159
    365768 5jvg:U (3.428) BS01 rna ? GO:0003735 ... Q9RRG8 27791159
    365769 5jvg:V (3.428) BS01 rna ? GO:0003735 ... Q9RXJ4 27791159
    365770 5jvg:W (3.428) BS01 rna ? GO:0003735 ... Q9RSL0 27791159
    365771 5jvg:Z (3.428) BS01 rna ? GO:0003735 ... P49228 27791159
    365772 5jvh:1 (3.58) BS01 rna ? GO:0000049 ... Q9RSS4 27791159
    365773 5jvh:2 (3.58) BS01 rna ? GO:0003735 ... Q9RSH2 27791159
    365774 5jvh:3 (3.58) BS01 rna ? GO:0003735 ... Q9RSW6 27791159
    365775 5jvh:A (3.58) BS01 rna ? GO:0002181 ... Q9RXJ9 27791159
    365776 5jvh:B (3.58) BS01 rna ? GO:0003735 ... Q9RXK2 27791159
    365777 5jvh:C (3.58) BS01 rna ? GO:0003735 ... Q9RXK1 27791159
    365778 5jvh:D (3.58) BS01 rna ? GO:0000049 ... Q9RXJ0 27791159
    365779 5jvh:D (3.58) BS02 rna ? GO:0000049 ... Q9RXJ0 27791159
    365780 5jvh:E (3.58) BS01 rna ? GO:0002181 ... Q9RSL3 27791159
    365781 5jvh:G (3.58) BS01 rna ? GO:0003729 ... Q9RXY1 27791159
    365782 5jvh:H (3.58) BS01 rna ? GO:0003735 ... Q9RXJ2 27791159
    365783 5jvh:I (3.58) BS01 rna ? GO:0003735 ... Q9RSK9 27791159
    365784 5jvh:J (3.58) BS01 rna ? GO:0000049 ... Q9RXJ5 27791159
    365785 5jvh:J (3.58) BS02 rna ? GO:0000049 ... Q9RXJ5 27791159
    365786 5jvh:J (3.58) BS03 6O1 ? GO:0000049 ... Q9RXJ5 27791159
    365787 5jvh:K (3.58) BS01 rna ? GO:0003735 ... Q9RSJ5 27791159
    365788 5jvh:L (3.58) BS01 rna ? GO:0003735 ... Q9RSL2 27791159
    365789 5jvh:L (3.58) BS02 rna ? GO:0003735 ... Q9RSL2 27791159
    365790 5jvh:M (3.58) BS01 rna ? GO:0003735 ... Q9RWB4 27791159
    365791 5jvh:N (3.58) BS01 rna ? GO:0000027 ... Q9RSW7 27791159
    365792 5jvh:O (3.58) BS01 rna ? GO:0003723 ... Q9RY64 27791159
    365793 5jvh:P (3.58) BS01 rna ? GO:0003735 ... Q9RXJ7 27791159
    365794 5jvh:Q (3.58) BS01 rna ? GO:0003735 ... Q9RXK0 27791159
    365795 5jvh:R (3.58) BS01 rna ? GO:0003723 ... Q9RXJ1 27791159
    365796 5jvh:S (3.58) BS01 rna ? GO:0000049 ... Q9RX88 27791159
    365797 5jvh:S (3.58) BS02 rna ? GO:0000049 ... Q9RX88 27791159
    365798 5jvh:T (3.58) BS01 rna ? GO:0000049 ... Q9RY65 27791159
    365799 5jvh:U (3.58) BS01 rna ? GO:0003735 ... Q9RRG8 27791159
    365800 5jvh:V (3.58) BS01 rna ? GO:0003735 ... Q9RXJ4 27791159

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).