SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    36401 1nji:3 (3.0) BS01 rna ? GO:0003735 ... P22452 12860128
    36402 1nji:4 (3.0) BS01 rna ? GO:0003735 ... P32411 12860128
    36403 1nji:4 (3.0) BS02 MG ? GO:0003735 ... P32411 12860128
    36404 1nji:C (3.0) BS01 rna ? GO:0002181 ... P20276 12860128
    36405 1nji:C (3.0) BS02 MG ? GO:0002181 ... P20276 12860128
    36406 1nji:D (3.0) BS01 rna ? GO:0003723 ... P20279 12860128
    36407 1nji:E (3.0) BS01 rna ? GO:0003735 ... P12735 12860128
    36408 1nji:F (3.0) BS01 rna ? GO:0000049 ... P14124 12860128
    36409 1nji:F (3.0) BS02 rna ? GO:0000049 ... P14124 12860128
    36410 1nji:G (3.0) BS01 rna ? GO:0002181 ... P14135 12860128
    36411 1nji:H (3.0) BS01 rna ? GO:0001682 ... P12743 12860128
    36412 1nji:J (3.0) BS01 rna ? GO:0003735 ... P60617 12860128
    36413 1nji:K (3.0) BS01 rna ? GO:0003729 ... P29198 12860128
    36414 1nji:L (3.0) BS01 rna ? GO:0003735 ... P22450 12860128
    36415 1nji:M (3.0) BS01 rna ? GO:0003735 ... P12737 12860128
    36416 1nji:N (3.0) BS01 rna ? GO:0002181 ... P60618 12860128
    36417 1nji:O (3.0) BS01 rna ? GO:0000027 ... P14123 12860128
    36418 1nji:O (3.0) BS02 rna ? GO:0000027 ... P14123 12860128
    36419 1nji:P (3.0) BS01 rna ? GO:0003723 ... P12733 12860128
    36420 1nji:Q (3.0) BS01 rna ? GO:0003723 ... P14119 12860128
    36421 1nji:R (3.0) BS01 rna ? GO:0003735 ... P12734 12860128
    36422 1nji:R (3.0) BS02 rna ? GO:0003735 ... P12734 12860128
    36423 1nji:S (3.0) BS01 rna ? GO:0002181 ... P10970 12860128
    36424 1nji:T (3.0) BS01 rna ? GO:0003735 ... P12732 12860128
    36425 1nji:U (3.0) BS01 rna ? GO:0003723 ... P10972 12860128
    36426 1nji:U (3.0) BS02 MG ? GO:0003723 ... P10972 12860128
    36427 1nji:V (3.0) BS01 rna ? GO:0003735 ... P14116 12860128
    36428 1nji:W (3.0) BS01 rna ? GO:0003735 ... P10971 12860128
    36429 1nji:X (3.0) BS01 rna ? GO:0000463 ... P14121 12860128
    36430 1nji:X (3.0) BS02 rna ? GO:0000463 ... P14121 12860128
    36431 1nji:Y (3.0) BS01 rna ? GO:0002181 ... P18138 12860128
    36432 1nji:Z (3.0) BS01 rna ? GO:0000166 ... P12736 12860128
    36433 1nji:Z (3.0) BS02 MG ? GO:0000166 ... P12736 12860128
    36434 1njj:A (2.45) BS01 GET 4.1.1.17 GO:0003824 ... Q9TZZ6 12672797 MOAD: Ki=8mM
    36435 1njj:A (2.45) BS02 ORX 4.1.1.17 GO:0003824 ... Q9TZZ6 12672797 MOAD: Kd=0.27mM
    36436 1njj:B (2.45) BS01 GET 4.1.1.17 GO:0003824 ... Q9TZZ6 12672797 MOAD: Ki=8mM
    36437 1njj:B (2.45) BS02 ORX 4.1.1.17 GO:0003824 ... Q9TZZ6 12672797 MOAD: Kd=0.27mM
    36438 1njj:C (2.45) BS01 GET 4.1.1.17 GO:0003824 ... Q9TZZ6 12672797 MOAD: Ki=8mM
    36439 1njj:C (2.45) BS02 ORX 4.1.1.17 GO:0003824 ... Q9TZZ6 12672797 MOAD: Kd=0.27mM
    36440 1njj:D (2.45) BS01 ORX 4.1.1.17 GO:0003824 ... Q9TZZ6 12672797 MOAD: Kd=0.27mM
    36441 1njj:D (2.45) BS02 ORX 4.1.1.17 GO:0003824 ... Q9TZZ6 12672797 MOAD: Kd=0.27mM
    36442 1njr:A (1.9) BS01 XYL 3.1.3.84 GO:0005575 ... Q04299 15722447
    36443 1njs:A (1.98) BS01 KEU 2.1.2.2
    6.3.3.1
    6.3.4.13
    GO:0004644 ... P22102 12755606 MOAD: Ki=15nM
    36444 1njs:B (1.98) BS01 KEU 2.1.2.2
    6.3.3.1
    6.3.4.13
    GO:0004644 ... P22102 12755606 MOAD: Ki=15nM
    36445 1njt:A (2.5) BS01 peptide 3.4.21.97 GO:0004252 ... P16753 12549906
    36446 1njt:A (2.5) BS02 peptide 3.4.21.97 GO:0004252 ... P16753 12549906
    36447 1njt:B (2.5) BS01 peptide 3.4.21.97 GO:0004252 ... P16753 12549906
    36448 1njt:B (2.5) BS02 peptide 3.4.21.97 GO:0004252 ... P16753 12549906
    36449 1njt:C (2.5) BS01 peptide 3.4.21.97 GO:0004252 ... P16753 12549906
    36450 1njt:C (2.5) BS02 peptide 3.4.21.97 GO:0004252 ... P16753 12549906
    36451 1njt:D (2.5) BS01 peptide 3.4.21.97 GO:0004252 ... P16753 12549906
    36452 1nju:A (2.7) BS01 0FP 3.4.21.97 GO:0004252 ... P16753 12549906
    36453 1nju:B (2.7) BS01 0FP 3.4.21.97 GO:0004252 ... P16753 12549906
    36454 1nju:C (2.7) BS01 0FP 3.4.21.97 GO:0004252 ... P16753 12549906
    36455 1nju:D (2.7) BS01 0FP 3.4.21.97 GO:0004252 ... P16753 12549906
    36456 1njw:A (1.9) BS01 dna 2.7.7.7 GO:0003676 ... Q5KWC1 15035983
    36457 1njw:A (1.9) BS02 dna 2.7.7.7 GO:0003676 ... Q5KWC1 15035983
    36458 1njw:A (1.9) BS03 GLC 2.7.7.7 GO:0003676 ... Q5KWC1 15035983
    36459 1njw:A (1.9) BS04 FRU 2.7.7.7 GO:0003676 ... Q5KWC1 15035983
    36460 1njw:A (1.9) BS05 GLC 2.7.7.7 GO:0003676 ... Q5KWC1 15035983
    36461 1njw:A (1.9) BS06 FRU 2.7.7.7 GO:0003676 ... Q5KWC1 15035983
    36462 1njw:A (1.9) BS07 MG 2.7.7.7 GO:0003676 ... Q5KWC1 15035983
    36463 1njx:A (1.65) BS01 dna 2.7.7.7 GO:0003676 ... P52026 15035983
    36464 1njx:A (1.65) BS02 dna 2.7.7.7 GO:0003676 ... P52026 15035983
    36465 1njx:A (1.65) BS03 GLC 2.7.7.7 GO:0003676 ... P52026 15035983
    36466 1njx:A (1.65) BS04 FRU 2.7.7.7 GO:0003676 ... P52026 15035983
    36467 1njx:A (1.65) BS05 GLC 2.7.7.7 GO:0003676 ... P52026 15035983
    36468 1njx:A (1.65) BS06 GLC 2.7.7.7 GO:0003676 ... P52026 15035983
    36469 1njx:A (1.65) BS07 FRU 2.7.7.7 GO:0003676 ... P52026 15035983
    36470 1njx:A (1.65) BS08 MG 2.7.7.7 GO:0003676 ... P52026 15035983
    36471 1njy:A (2.0) BS01 dna 2.7.7.7 GO:0003676 ... P52026 15035983
    36472 1njy:A (2.0) BS02 dna 2.7.7.7 GO:0003676 ... P52026 15035983
    36473 1njy:A (2.0) BS03 GLC 2.7.7.7 GO:0003676 ... P52026 15035983
    36474 1njy:A (2.0) BS04 FRU 2.7.7.7 GO:0003676 ... P52026 15035983
    36475 1njy:A (2.0) BS05 GLC 2.7.7.7 GO:0003676 ... P52026 15035983
    36476 1njy:A (2.0) BS06 FRU 2.7.7.7 GO:0003676 ... P52026 15035983
    36477 1njy:A (2.0) BS07 TTP 2.7.7.7 GO:0003676 ... P52026 15035983
    36478 1njy:A (2.0) BS08 MG 2.7.7.7 GO:0003676 ... P52026 15035983
    36479 1njz:A (2.0) BS01 dna 2.7.7.7 GO:0003676 ... P52026 15035983
    36480 1njz:A (2.0) BS02 dna 2.7.7.7 GO:0003676 ... P52026 15035983
    36481 1njz:A (2.0) BS03 GLC 2.7.7.7 GO:0003676 ... P52026 15035983
    36482 1njz:A (2.0) BS04 FRU 2.7.7.7 GO:0003676 ... P52026 15035983
    36483 1njz:A (2.0) BS05 MG 2.7.7.7 GO:0003676 ... P52026 15035983
    36484 1nk0:A (1.7) BS01 dna 2.7.7.7 GO:0003676 ... P52026 15035983
    36485 1nk0:A (1.7) BS02 dna 2.7.7.7 GO:0003676 ... P52026 15035983
    36486 1nk0:A (1.7) BS03 GLC 2.7.7.7 GO:0003676 ... P52026 15035983
    36487 1nk0:A (1.7) BS04 FRU 2.7.7.7 GO:0003676 ... P52026 15035983
    36488 1nk2:P (-1.00) BS01 dna ? GO:0000981 ... P22808 9154919
    36489 1nk2:P (-1.00) BS02 dna ? GO:0000981 ... P22808 9154919
    36490 1nk3:P (-1.00) BS01 dna ? GO:0000981 ... P22808 9154919
    36491 1nk3:P (-1.00) BS02 dna ? GO:0000981 ... P22808 9154919
    36492 1nk4:A (1.6) BS01 dna 2.7.7.7 GO:0003676 ... P52026 15035983
    36493 1nk4:A (1.6) BS02 dna 2.7.7.7 GO:0003676 ... P52026 15035983
    36494 1nk4:A (1.6) BS03 FRU 2.7.7.7 GO:0003676 ... P52026 15035983
    36495 1nk4:A (1.6) BS04 MG 2.7.7.7 GO:0003676 ... P52026 15035983
    36496 1nk5:A (2.1) BS01 dna 2.7.7.7 GO:0003676 ... P52026 15035983
    36497 1nk5:A (2.1) BS02 dna 2.7.7.7 GO:0003676 ... P52026 15035983
    36498 1nk5:A (2.1) BS03 GLC 2.7.7.7 GO:0003676 ... P52026 15035983
    36499 1nk5:A (2.1) BS04 FRU 2.7.7.7 GO:0003676 ... P52026 15035983
    36500 1nk5:A (2.1) BS05 MG 2.7.7.7 GO:0003676 ... P52026 15035983
    36501 1nk6:A (2.1) BS01 dna 2.7.7.7 GO:0003676 ... P52026 15035983
    36502 1nk6:A (2.1) BS02 dna 2.7.7.7 GO:0003676 ... P52026 15035983
    36503 1nk6:A (2.1) BS03 GLC 2.7.7.7 GO:0003676 ... P52026 15035983
    36504 1nk6:A (2.1) BS04 FRU 2.7.7.7 GO:0003676 ... P52026 15035983
    36505 1nk6:A (2.1) BS05 GLC 2.7.7.7 GO:0003676 ... P52026 15035983
    36506 1nk7:A (1.9) BS01 dna 2.7.7.7 GO:0003676 ... P52026 15035983
    36507 1nk7:A (1.9) BS02 dna 2.7.7.7 GO:0003676 ... P52026 15035983
    36508 1nk7:A (1.9) BS03 GLC 2.7.7.7 GO:0003676 ... P52026 15035983
    36509 1nk7:A (1.9) BS04 FRU 2.7.7.7 GO:0003676 ... P52026 15035983
    36510 1nk7:A (1.9) BS05 GLC 2.7.7.7 GO:0003676 ... P52026 15035983
    36511 1nk7:A (1.9) BS06 MG 2.7.7.7 GO:0003676 ... P52026 15035983
    36512 1nk8:A (1.9) BS01 dna 2.7.7.7 GO:0003676 ... P52026 15035983
    36513 1nk8:A (1.9) BS02 dna 2.7.7.7 GO:0003676 ... P52026 15035983
    36514 1nk8:A (1.9) BS03 FRU 2.7.7.7 GO:0003676 ... P52026 15035983
    36515 1nk8:A (1.9) BS04 GLC 2.7.7.7 GO:0003676 ... P52026 15035983
    36516 1nk8:A (1.9) BS05 GLC 2.7.7.7 GO:0003676 ... P52026 15035983
    36517 1nk8:A (1.9) BS06 MG 2.7.7.7 GO:0003676 ... P52026 15035983
    36518 1nk9:A (1.9) BS01 dna 2.7.7.7 GO:0003676 ... P52026 15035983
    36519 1nk9:A (1.9) BS02 dna 2.7.7.7 GO:0003676 ... P52026 15035983
    36520 1nk9:A (1.9) BS03 GLC 2.7.7.7 GO:0003676 ... P52026 15035983
    36521 1nk9:A (1.9) BS04 FRU 2.7.7.7 GO:0003676 ... P52026 15035983
    36522 1nk9:A (1.9) BS05 GLC 2.7.7.7 GO:0003676 ... P52026 15035983
    36523 1nk9:A (1.9) BS06 MG 2.7.7.7 GO:0003676 ... P52026 15035983
    36524 1nkb:A (2.0) BS01 dna 2.7.7.7 GO:0003676 ... P52026 15035983
    36525 1nkb:A (2.0) BS02 dna 2.7.7.7 GO:0003676 ... P52026 15035983
    36526 1nkb:A (2.0) BS03 GLC 2.7.7.7 GO:0003676 ... P52026 15035983
    36527 1nkb:A (2.0) BS04 FRU 2.7.7.7 GO:0003676 ... P52026 15035983
    36528 1nkb:A (2.0) BS05 GLC 2.7.7.7 GO:0003676 ... P52026 15035983
    36529 1nkb:A (2.0) BS06 FRU 2.7.7.7 GO:0003676 ... P52026 15035983
    36530 1nkb:A (2.0) BS07 MG 2.7.7.7 GO:0003676 ... P52026 15035983
    36531 1nkc:A (1.8) BS01 dna 2.7.7.7 GO:0003676 ... P52026 15035983
    36532 1nkc:A (1.8) BS02 dna 2.7.7.7 GO:0003676 ... P52026 15035983
    36533 1nkc:A (1.8) BS03 GLC 2.7.7.7 GO:0003676 ... P52026 15035983
    36534 1nkc:A (1.8) BS04 FRU 2.7.7.7 GO:0003676 ... P52026 15035983
    36535 1nkc:A (1.8) BS05 MG 2.7.7.7 GO:0003676 ... P52026 15035983
    36536 1nke:A (1.8) BS01 dna 2.7.7.7 GO:0003676 ... P52026 15035983
    36537 1nke:A (1.8) BS02 dna 2.7.7.7 GO:0003676 ... P52026 15035983
    36538 1nke:A (1.8) BS03 GLC 2.7.7.7 GO:0003676 ... P52026 15035983
    36539 1nke:A (1.8) BS04 FRU 2.7.7.7 GO:0003676 ... P52026 15035983
    36540 1nke:A (1.8) BS05 GLC 2.7.7.7 GO:0003676 ... P52026 15035983
    36541 1nke:A (1.8) BS06 DCP 2.7.7.7 GO:0003676 ... P52026 15035983
    36542 1nke:A (1.8) BS07 MG 2.7.7.7 GO:0003676 ... P52026 15035983
    36543 1nkg:A (1.5) BS01 CA 4.2.2.23 GO:0005576 ... Q00019 15135077
    36544 1nkh:A (2.0) BS01 CA ? GO:0003796 ... P29752 11419947
    36545 1nkh:B (2.0) BS01 MN 2.4.1.-
    2.4.1.22
    2.4.1.275
    2.4.1.38
    2.4.1.90
    GO:0005975 ... P08037 11419947
    36546 1nkh:B (2.0) BS02 UDP 2.4.1.-
    2.4.1.22
    2.4.1.275
    2.4.1.38
    2.4.1.90
    GO:0005975 ... P08037 11419947
    36547 1nkh:B (2.0) BS03 UDP 2.4.1.-
    2.4.1.22
    2.4.1.275
    2.4.1.38
    2.4.1.90
    GO:0005975 ... P08037 11419947
    36548 1nkh:C (2.0) BS01 CA ? GO:0003796 ... P29752 11419947
    36549 1nkh:D (2.0) BS01 MN 2.4.1.-
    2.4.1.22
    2.4.1.275
    2.4.1.38
    2.4.1.90
    GO:0005975 ... P08037 11419947
    36550 1nkh:D (2.0) BS02 UDP 2.4.1.-
    2.4.1.22
    2.4.1.275
    2.4.1.38
    2.4.1.90
    GO:0005975 ... P08037 11419947
    36551 1nkh:D (2.0) BS03 UDP 2.4.1.-
    2.4.1.22
    2.4.1.275
    2.4.1.38
    2.4.1.90
    GO:0005975 ... P08037 11419947
    36552 1nki:A (0.95) BS01 MN 2.5.1.18 GO:0004364 ... Q9I4K6 15504029
    36553 1nki:A (0.95) BS02 PPF 2.5.1.18 GO:0004364 ... Q9I4K6 15504029 MOAD: Kd=0.2uM
    36554 1nki:B (0.95) BS01 MN 2.5.1.18 GO:0004364 ... Q9I4K6 15504029
    36555 1nki:B (0.95) BS02 PPF 2.5.1.18 GO:0004364 ... Q9I4K6 15504029 MOAD: Kd=0.2uM
    36556 1nkk:A (2.6) BS01 peptide 3.4.21.97 GO:0004252 ... P16753 12549906
    36557 1nkk:A (2.6) BS02 peptide 3.4.21.97 GO:0004252 ... P16753 12549906
    36558 1nkk:B (2.6) BS01 peptide 3.4.21.97 GO:0004252 ... P16753 12549906
    36559 1nkk:B (2.6) BS02 peptide 3.4.21.97 GO:0004252 ... P16753 12549906
    36560 1nkk:C (2.6) BS01 peptide 3.4.21.97 GO:0004252 ... P16753 12549906
    36561 1nkk:C (2.6) BS02 peptide 3.4.21.97 GO:0004252 ... P16753 12549906
    36562 1nkk:D (2.6) BS01 peptide 3.4.21.97 GO:0004252 ... P16753 12549906
    36563 1nkm:A (2.7) BS01 0FP 3.4.21.97 GO:0004252 ... P16753 12549906
    36564 1nkp:A (1.8) BS01 dna ? GO:0003700 ... P01106 12553908
    36565 1nkp:A (1.8) BS02 dna ? GO:0003700 ... P01106 12553908
    36566 1nkp:B (1.8) BS01 dna ? GO:0046983 ... P61244 12553908
    36567 1nkp:B (1.8) BS02 dna ? GO:0046983 ... P61244 12553908
    36568 1nkp:D (1.8) BS01 dna ? GO:0003700 ... P01106 12553908
    36569 1nkp:D (1.8) BS02 dna ? GO:0003700 ... P01106 12553908
    36570 1nkp:E (1.8) BS01 dna ? GO:0046983 ... P61244 12553908
    36571 1nkp:E (1.8) BS02 dna ? GO:0046983 ... P61244 12553908
    36572 1nkq:A (2.2) BS01 CA 3.-.-.- GO:0003674 ... P53889 N/A
    36573 1nkq:B (2.2) BS01 CA 3.-.-.- GO:0003674 ... P53889 N/A
    36574 1nkq:C (2.2) BS01 CA 3.-.-.- GO:0003674 ... P53889 N/A
    36575 1nkq:D (2.2) BS01 CA 3.-.-.- GO:0003674 ... P53889 N/A
    36576 1nkq:E (2.2) BS01 CA 3.-.-.- GO:0003674 ... P53889 N/A
    36577 1nkq:F (2.2) BS01 CA 3.-.-.- GO:0003674 ... P53889 N/A
    36578 1nks:C (2.57) BS01 AMP 2.7.4.3 GO:0004017 ... P35028 9733648
    36579 1nks:D (2.57) BS01 AMP 2.7.4.3 GO:0004017 ... P35028 9733648
    36580 1nks:F (2.57) BS01 AMP 2.7.4.3 GO:0004017 ... P35028 9733648
    36581 1nks:F (2.57) BS02 ADP 2.7.4.3 GO:0004017 ... P35028 9733648
    36582 1nkt:A (2.601) BS01 ADP 7.4.2.8 GO:0005515 ... P9WGP5 12606717
    36583 1nkt:B (2.601) BS01 ADP 7.4.2.8 GO:0005515 ... P9WGP5 12606717
    36584 1nku:A (-1.00) BS01 ZN 3.2.2.20 GO:0003824 ... P05100 12654914
    36585 1nkw:3 (3.1) BS01 rna ? GO:0003735 ... Q9RSW6 11733066
    36586 1nkw:A (3.1) BS01 rna ? GO:0002181 ... Q9RXJ9 11733066
    36587 1nkw:B (3.1) BS01 rna ? GO:0003735 ... Q9RXK2 11733066
    36588 1nkw:C (3.1) BS01 rna ? GO:0003735 ... Q9RXK1 11733066
    36589 1nkw:D (3.1) BS01 rna ? GO:0000049 ... Q9RXJ0 11733066
    36590 1nkw:I (3.1) BS01 rna ? GO:0003735 ... Q9RXJ2 11733066
    36591 1nkw:J (3.1) BS01 rna ? GO:0003735 ... Q9RSK9 11733066
    36592 1nkw:K (3.1) BS01 rna ? GO:0003735 ... Q9RXJ5 11733066
    36593 1nkw:L (3.1) BS01 rna ? GO:0003735 ... Q9RSJ5 11733066
    36594 1nkw:O (3.1) BS01 rna ? GO:0000027 ... Q9RSW7 11733066
    36595 1nkw:Q (3.1) BS01 rna ? GO:0003735 ... Q9RXJ7 11733066
    36596 1nkw:X (3.1) BS01 rna ? GO:0003735 ... Q9RSL0 11733066
    36597 1nkw:Y (3.1) BS01 rna ? GO:0003735 ... Q9RW44 11733066
    36598 1nkw:Z (3.1) BS01 rna ? GO:0003735 ... P49228 11733066
    36599 1nkx:A (1.9) BS01 FE 3.4.21.- GO:0005576 ... P24627 12888354
    36600 1nkx:A (1.9) BS02 CO3 3.4.21.- GO:0005576 ... P24627 12888354

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).