SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    366201 5k02:O (1.99) BS01 CU 1.15.1.1 GO:0000302 ... P00441 27667694
    366202 5k02:O (1.99) BS02 ZN 1.15.1.1 GO:0000302 ... P00441 27667694
    366203 5k02:P (1.99) BS01 CU 1.15.1.1 GO:0000302 ... P00441 27667694
    366204 5k02:P (1.99) BS02 ZN 1.15.1.1 GO:0000302 ... P00441 27667694
    366205 5k02:Q (1.99) BS01 CU 1.15.1.1 GO:0000302 ... P00441 27667694
    366206 5k02:Q (1.99) BS02 ZN 1.15.1.1 GO:0000302 ... P00441 27667694
    366207 5k02:R (1.99) BS01 CU 1.15.1.1 GO:0000302 ... P00441 27667694
    366208 5k02:R (1.99) BS02 ZN 1.15.1.1 GO:0000302 ... P00441 27667694
    366209 5k02:S (1.99) BS01 CU 1.15.1.1 GO:0000302 ... P00441 27667694
    366210 5k02:S (1.99) BS02 ZN 1.15.1.1 GO:0000302 ... P00441 27667694
    366211 5k02:T (1.99) BS01 CU 1.15.1.1 GO:0000302 ... P00441 27667694
    366212 5k02:T (1.99) BS02 ZN 1.15.1.1 GO:0000302 ... P00441 27667694
    366213 5k02:U (1.99) BS01 CU 1.15.1.1 GO:0000302 ... P00441 27667694
    366214 5k02:U (1.99) BS02 ZN 1.15.1.1 GO:0000302 ... P00441 27667694
    366215 5k02:V (1.99) BS01 CU 1.15.1.1 GO:0000302 ... P00441 27667694
    366216 5k02:V (1.99) BS02 ZN 1.15.1.1 GO:0000302 ... P00441 27667694
    366217 5k02:W (1.99) BS01 CU 1.15.1.1 GO:0000302 ... P00441 27667694
    366218 5k02:W (1.99) BS02 ZN 1.15.1.1 GO:0000302 ... P00441 27667694
    366219 5k02:X (1.99) BS01 CU 1.15.1.1 GO:0000302 ... P00441 27667694
    366220 5k02:X (1.99) BS02 ZN 1.15.1.1 GO:0000302 ... P00441 27667694
    366221 5k03:A (1.81) BS01 6P4 2.1.1.6 GO:0000287 ... P22734 27685665
    366222 5k04:B (2.4) BS01 COA ? GO:0004596 ... C4YDZ9 28380339
    366223 5k05:A (2.14) BS01 6P5 2.1.1.6 GO:0000287 ... P22734 27685665
    366224 5k05:B (2.14) BS01 6P5 2.1.1.6 GO:0000287 ... P22734 27685665
    366225 5k07:A (2.0) BS01 dna ? GO:0003677 ... Q97ZE3 27685992
    366226 5k07:A (2.0) BS02 dna ? GO:0003677 ... Q97ZE3 27685992
    366227 5k08:A (1.401) BS01 ZPT 3.1.-.- GO:0016539 ... P9WHJ3 N/A
    366228 5k08:A (1.401) BS02 TCE 3.1.-.- GO:0016539 ... P9WHJ3 N/A
    366229 5k09:A (2.7) BS01 6PQ 2.1.1.6 GO:0000287 ... P22734 27685665
    366230 5k09:B (2.7) BS01 6PQ 2.1.1.6 GO:0000287 ... P22734 27685665
    366231 5k09:C (2.7) BS01 6PQ 2.1.1.6 GO:0000287 ... P22734 27685665
    366232 5k09:D (2.7) BS01 6PQ 2.1.1.6 GO:0000287 ... P22734 27685665
    366233 5k09:E (2.7) BS01 6PQ 2.1.1.6 GO:0000287 ... P22734 27685665
    366234 5k09:F (2.7) BS01 6PQ 2.1.1.6 GO:0000287 ... P22734 27685665
    366235 5k09:G (2.7) BS01 6PQ 2.1.1.6 GO:0000287 ... P22734 27685665
    366236 5k09:H (2.7) BS01 6PQ 2.1.1.6 GO:0000287 ... P22734 27685665
    366237 5k09:I (2.7) BS01 6PQ 2.1.1.6 GO:0000287 ... P22734 27685665
    366238 5k09:J (2.7) BS01 6PQ 2.1.1.6 GO:0000287 ... P22734 27685665
    366239 5k09:K (2.7) BS01 6PQ 2.1.1.6 GO:0000287 ... P22734 27685665
    366240 5k09:L (2.7) BS01 6PQ 2.1.1.6 GO:0000287 ... P22734 27685665
    366241 5k09:M (2.7) BS01 6PQ 2.1.1.6 GO:0000287 ... P22734 27685665
    366242 5k09:N (2.7) BS01 6PQ 2.1.1.6 GO:0000287 ... P22734 27685665
    366243 5k09:O (2.7) BS01 6PQ 2.1.1.6 GO:0000287 ... P22734 27685665
    366244 5k09:P (2.7) BS01 6PQ 2.1.1.6 GO:0000287 ... P22734 27685665
    366245 5k09:Q (2.7) BS01 6PQ 2.1.1.6 GO:0000287 ... P22734 27685665
    366246 5k09:R (2.7) BS01 6PQ 2.1.1.6 GO:0000287 ... P22734 27685665
    366247 5k09:S (2.7) BS01 6PQ 2.1.1.6 GO:0000287 ... P22734 27685665
    366248 5k09:T (2.7) BS01 6PQ 2.1.1.6 GO:0000287 ... P22734 27685665
    366249 5k09:U (2.7) BS01 6PQ 2.1.1.6 GO:0000287 ... P22734 27685665
    366250 5k09:V (2.7) BS01 6PQ 2.1.1.6 GO:0000287 ... P22734 27685665
    366251 5k09:W (2.7) BS01 6PQ 2.1.1.6 GO:0000287 ... P22734 27685665
    366252 5k09:X (2.7) BS01 6PQ 2.1.1.6 GO:0000287 ... P22734 27685665
    366253 5k0a:A (1.706) BS01 FAD ? GO:0000166 ... P74746 29133410
    366254 5k0a:A (1.706) BS02 FAD ? GO:0000166 ... P74746 29133410
    366255 5k0a:B (1.706) BS01 FAD ? GO:0000166 ... P74746 29133410
    366256 5k0a:B (1.706) BS02 FAD ? GO:0000166 ... P74746 29133410
    366257 5k0a:C (1.706) BS01 FAD ? GO:0000166 ... P74746 29133410
    366258 5k0a:C (1.706) BS02 FAD ? GO:0000166 ... P74746 29133410
    366259 5k0a:D (1.706) BS01 FAD ? GO:0000166 ... P74746 29133410
    366260 5k0a:D (1.706) BS02 FAD ? GO:0000166 ... P74746 29133410
    366261 5k0b:A (2.36) BS01 6PS 2.1.1.6 GO:0000287 ... P22734 27685665
    366262 5k0b:B (2.36) BS01 6PS 2.1.1.6 GO:0000287 ... P22734 27685665
    366263 5k0b:C (2.36) BS01 6PS 2.1.1.6 GO:0000287 ... P22734 27685665
    366264 5k0b:D (2.36) BS01 6PS 2.1.1.6 GO:0000287 ... P22734 27685665
    366265 5k0b:E (2.36) BS01 6PS 2.1.1.6 GO:0000287 ... P22734 27685665
    366266 5k0b:F (2.36) BS01 6PS 2.1.1.6 GO:0000287 ... P22734 27685665
    366267 5k0b:G (2.36) BS01 6PS 2.1.1.6 GO:0000287 ... P22734 27685665
    366268 5k0b:H (2.36) BS01 6PS 2.1.1.6 GO:0000287 ... P22734 27685665
    366269 5k0c:A (1.95) BS01 6OZ 2.1.1.6 GO:0000287 ... P22734 27685665
    366270 5k0c:B (1.95) BS01 6OZ 2.1.1.6 GO:0000287 ... P22734 27685665
    366271 5k0d:A (1.824) BS01 CU 1.10.3.2 GO:0005507 ... Q72HW2 N/A
    366272 5k0d:A (1.824) BS02 CU 1.10.3.2 GO:0005507 ... Q72HW2 N/A
    366273 5k0d:A (1.824) BS03 CU 1.10.3.2 GO:0005507 ... Q72HW2 N/A
    366274 5k0e:A (2.3) BS01 6OZ 2.1.1.6 GO:0000287 ... P22734 N/A
    366275 5k0f:A (1.81) BS01 6P1 2.1.1.6 GO:0000287 ... P22734 27685665 MOAD: ic50=0.47uM
    366276 5k0f:B (1.81) BS01 6P1 2.1.1.6 GO:0000287 ... P22734 27685665 MOAD: ic50=0.47uM
    366277 5k0g:A (1.89) BS01 6PM 2.1.1.6 GO:0000287 ... P22734 27685665
    366278 5k0g:B (1.89) BS01 6PM 2.1.1.6 GO:0000287 ... P22734 27685665
    366279 5k0h:A (2.2) BS01 CA 3.4.21.6 GO:0004252 ... P00742 16848746
    366280 5k0h:A (2.2) BS02 CA 3.4.21.6 GO:0004252 ... P00742 16848746
    366281 5k0h:A (2.2) BS03 6PK 3.4.21.6 GO:0004252 ... P00742 16848746 BindingDB: Ki=29nM
    366282 5k0i:A (1.3) BS01 6PW 1.11.1.-
    2.5.1.18
    5.3.99.3
    GO:0001516 ... O14684 27554445 MOAD: ic50=0.002uM
    BindingDB: IC50=2.0nM
    366283 5k0i:A (1.3) BS02 GSH 1.11.1.-
    2.5.1.18
    5.3.99.3
    GO:0001516 ... O14684 27554445
    366284 5k0j:A (1.94) BS01 6P2 2.1.1.6 GO:0000287 ... P22734 27685665
    366285 5k0j:B (1.94) BS01 6P2 2.1.1.6 GO:0000287 ... P22734 27685665
    366286 5k0k:A (2.545) BS01 6Q1 2.7.10.1 GO:0004672 ... Q12866 27994735
    366287 5k0k:B (2.545) BS01 MG 2.7.10.1 GO:0004672 ... Q12866 27994735
    366288 5k0k:B (2.545) BS02 6Q1 2.7.10.1 GO:0004672 ... Q12866 27994735
    366289 5k0l:A (2.02) BS01 MG 2.1.1.6 GO:0000287 ... P22734 27685665
    366290 5k0l:A (2.02) BS02 6P2 2.1.1.6 GO:0000287 ... P22734 27685665
    366291 5k0l:B (2.02) BS01 MG 2.1.1.6 GO:0000287 ... P22734 27685665
    366292 5k0l:B (2.02) BS02 6P2 2.1.1.6 GO:0000287 ... P22734 27685665
    366293 5k0l:C (2.02) BS01 MG 2.1.1.6 GO:0000287 ... P22734 27685665
    366294 5k0l:C (2.02) BS02 6P2 2.1.1.6 GO:0000287 ... P22734 27685665
    366295 5k0l:D (2.02) BS01 MG 2.1.1.6 GO:0000287 ... P22734 27685665
    366296 5k0l:D (2.02) BS02 6P2 2.1.1.6 GO:0000287 ... P22734 27685665
    366297 5k0m:A (1.83) BS01 6PU ? N/A O75530 28135237
    366298 5k0n:A (1.99) BS01 MG 2.1.1.6 GO:0000287 ... P22734 27685665
    366299 5k0n:A (1.99) BS02 6P0 2.1.1.6 GO:0000287 ... P22734 27685665
    366300 5k0n:B (1.99) BS01 MG 2.1.1.6 GO:0000287 ... P22734 27685665
    366301 5k0n:B (1.99) BS02 6P0 2.1.1.6 GO:0000287 ... P22734 27685665
    366302 5k0n:C (1.99) BS01 MG 2.1.1.6 GO:0000287 ... P22734 27685665
    366303 5k0n:C (1.99) BS02 6P0 2.1.1.6 GO:0000287 ... P22734 27685665
    366304 5k0n:D (1.99) BS01 MG 2.1.1.6 GO:0000287 ... P22734 27685665
    366305 5k0n:D (1.99) BS02 6P0 2.1.1.6 GO:0000287 ... P22734 27685665
    366306 5k0r:A (1.45) BS01 FNR 1.5.1.30 GO:0000166 ... Q8EBV3 28869767
    366307 5k0r:A (1.45) BS02 8K6 1.5.1.30 GO:0000166 ... Q8EBV3 28869767
    366308 5k0s:A (2.45) BS01 0OU 6.1.1.10 GO:0000166 ... P59078 27500735 MOAD: ic50=0.006uM
    366309 5k0s:B (2.45) BS01 0OU 6.1.1.10 GO:0000166 ... P59078 27500735 MOAD: ic50=0.006uM
    366310 5k0s:C (2.45) BS01 0OU 6.1.1.10 GO:0000166 ... P59078 27500735 MOAD: ic50=0.006uM
    366311 5k0t:A (2.6) BS01 415 6.1.1.10 GO:0000166 ... P59078 27500735
    366312 5k0t:B (2.6) BS01 415 6.1.1.10 GO:0000166 ... P59078 27500735
    366313 5k0t:C (2.6) BS01 415 6.1.1.10 GO:0000166 ... P59078 27500735
    366314 5k0w:A (2.61) BS01 ZN ? N/A Q4JRB6 27458232
    366315 5k0w:A (2.61) BS02 ZN ? N/A Q4JRB6 27458232
    366316 5k0w:B (2.61) BS01 ZN ? N/A Q4JRB6 27458232
    366317 5k0w:B (2.61) BS02 ZN ? N/A Q4JRB6 27458232
    366318 5k0x:A (2.231) BS01 K0X 2.7.10.1 GO:0004672 ... Q12866 28032464 MOAD: ic50=4.4nM
    BindingDB: IC50=<10nM
    366319 5k0x:B (2.231) BS01 K0X 2.7.10.1 GO:0004672 ... Q12866 28032464 MOAD: ic50=4.4nM
    BindingDB: IC50=<10nM
    366320 5k0y:G (5.8) BS01 rna ? GO:0003735 ... G1TRM4 27373335
    366321 5k0y:H (5.8) BS01 rna ? GO:0000462 ... G1SGX4 27373335
    366322 5k0y:I (5.8) BS01 rna ? GO:0003723 ... G1TK17 27373335
    366323 5k0y:J (5.8) BS01 rna ? GO:0002181 ... G1U7M4 27373335
    366324 5k0y:K (5.8) BS01 rna ? GO:0003723 ... B7NZS8 27373335
    366325 5k0y:L (5.8) BS01 rna ? GO:0003676 ... G1TPG3 27373335
    366326 5k0y:O (5.8) BS01 rna ? GO:0003676 ... O75821 27373335
    366327 5k0y:P (5.8) BS01 rna ? GO:0003676 ... G1T2G4 27373335
    366328 5k0y:Q (5.8) BS01 rna ? GO:0003735 ... G1SZ47 27373335
    366329 5k0y:R (5.8) BS01 rna ? GO:0000028 ... G1TN62 27373335
    366330 5k0y:S (5.8) BS01 rna 3.6.5.3 GO:0000049 ... G1SRA8 27373335
    366331 5k0y:S (5.8) BS02 peptide 3.6.5.3 GO:0000049 ... G1SRA8 27373335
    366332 5k0y:T (5.8) BS01 rna ? GO:0001732 ... Q5IH81 27373335
    366333 5k0y:U (5.8) BS01 rna ? GO:0003723 ... U3KMN4 27373335
    366334 5k0y:U (5.8) BS02 rna ? GO:0003723 ... U3KMN4 27373335
    366335 5k0y:V (5.8) BS01 rna ? GO:0003735 ... G1T8A2 27373335
    366336 5k0y:V (5.8) BS02 rna ? GO:0003735 ... G1T8A2 27373335
    366337 5k0y:W (5.8) BS01 rna ? N/A G1TDB3 27373335
    366338 5k0y:X (5.8) BS01 rna ? GO:0003735 ... G1SVB0 27373335
    366339 5k0y:Y (5.8) BS01 rna ? GO:0003735 ... G1TZ76 27373335
    366340 5k0y:Z (5.8) BS01 rna ? GO:0003735 ... G1SP51 27373335
    366341 5k0y:a (5.8) BS01 rna ? GO:0003735 ... G1TG89 27373335
    366342 5k0y:c (5.8) BS01 rna N/A GO:0003723 ... N/A 27373335
    366343 5k0y:c (5.8) BS02 rna N/A GO:0003723 ... N/A 27373335
    366344 5k0y:e (5.8) BS01 rna ? GO:0003735 ... G1TU13 27373335
    366345 5k0y:f (5.8) BS01 rna ? GO:0003735 ... G1TLT8 27373335
    366346 5k0y:g (5.8) BS01 rna 4.2.99.18 GO:0003677 ... G1TNM3 27373335
    366347 5k0y:g (5.8) BS02 rna 4.2.99.18 GO:0003677 ... G1TNM3 27373335
    366348 5k0y:h (5.8) BS01 rna ? GO:0003723 ... G1SIZ2 27373335
    366349 5k0y:i (5.8) BS01 rna ? GO:0003735 ... G1TN72 27373335
    366350 5k0y:j (5.8) BS01 rna ? GO:0003735 ... G1T1F0 27373335
    366351 5k0y:k (5.8) BS01 rna ? GO:0003735 ... G1TFE8 27373335
    366352 5k0y:l (5.8) BS01 rna ? GO:0000028 ... G1TIB4 27373335
    366353 5k0y:l (5.8) BS02 rna ? GO:0000028 ... G1TIB4 27373335
    366354 5k0y:m (5.8) BS01 rna ? GO:0001891 ... G1SJB4 27373335
    366355 5k0y:n (5.8) BS01 rna ? GO:0003723 ... G1U0Q2 27373335
    366356 5k0y:o (5.8) BS01 rna ? GO:0003735 ... G1TJW1 27373335
    366357 5k0y:p (5.8) BS01 rna ? GO:0003735 ... G1SK22 27373335
    366358 5k0y:q (5.8) BS01 rna ? GO:0003735 ... G1TM55 27373335
    366359 5k0y:r (5.8) BS01 rna ? GO:0003735 ... G1SFR8 27373335
    366360 5k0y:s (5.8) BS01 rna ? GO:0003735 ... G1TS40 27373335
    366361 5k0y:t (5.8) BS01 rna ? N/A G1T168 27373335
    366362 5k10:A (3.8) BS01 NDP 1.1.1.42 GO:0000287 ... O75874 27238019
    366363 5k10:B (3.8) BS01 NDP 1.1.1.42 GO:0000287 ... O75874 27238019
    366364 5k11:A (3.8) BS01 NDP 1.1.1.42 GO:0000287 ... O75874 27238019
    366365 5k11:B (3.8) BS01 NDP 1.1.1.42 GO:0000287 ... O75874 27238019
    366366 5k13:A (1.85) BS01 6Q7 ? GO:0003677 ... P10276 27261179 MOAD: Ki=1.8nM
    BindingDB: Ki=1.8nM
    366367 5k14:A (2.402) BS01 IB1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P04585 27371922
    366368 5k15:A (1.55) BS01 CU 1.10.3.2 GO:0005507 ... Q72HW2 N/A
    366369 5k15:A (1.55) BS02 CU 1.10.3.2 GO:0005507 ... Q72HW2 N/A
    366370 5k15:A (1.55) BS03 CU 1.10.3.2 GO:0005507 ... Q72HW2 N/A
    366371 5k16:A (2.599) BS01 ZN 3.4.19.12 GO:0004197 ... O75317 27373336
    366372 5k16:B (2.599) BS01 ZN 3.4.19.12 GO:0004197 ... O75317 27373336
    366373 5k17:A (2.1) BS01 dna ? GO:0003677 ... Q97ZE3 27685992
    366374 5k17:A (2.1) BS02 dna ? GO:0003677 ... Q97ZE3 27685992
    366375 5k17:B (2.1) BS01 dna ? GO:0003677 ... Q97ZE3 27685992
    366376 5k17:B (2.1) BS02 dna ? GO:0003677 ... Q97ZE3 27685992
    366377 5k18:B (2.73) BS01 peptide ? GO:0004596 ... C4YDZ9 28380339
    366378 5k18:B (2.73) BS02 COA ? GO:0004596 ... C4YDZ9 28380339
    366379 5k18:D (2.73) BS01 peptide ? GO:0004596 ... C4YDZ9 28380339
    366380 5k18:D (2.73) BS02 COA ? GO:0004596 ... C4YDZ9 28380339
    366381 5k1a:A (2.3) BS01 ZN 3.4.19.12 GO:0004843 ... O75317 27373336
    366382 5k1a:C (2.3) BS01 ZN 3.4.19.12 GO:0004843 ... O75317 27373336
    366383 5k1a:E (2.3) BS01 ZN 3.4.19.12 GO:0004843 ... O75317 27373336
    366384 5k1a:G (2.3) BS01 ZN 3.4.19.12 GO:0004843 ... O75317 27373336
    366385 5k1b:A (3.3) BS01 ZN 3.4.19.12 GO:0004197 ... O75317 27373336
    366386 5k1c:A (3.0) BS01 ZN 3.4.19.12 GO:0004197 ... O75317 27373336
    366387 5k1d:A (1.94) BS01 5GP 3.5.2.6 GO:0000166 ... Q99QC1 28242658 MOAD: Ki=20.8uM
    366388 5k1f:A (1.94) BS01 IMP 3.5.2.6 GO:0000166 ... Q99QC1 28242658 MOAD: Ki=16.2uM
    366389 5k1i:A (2.61) BS01 6PT 3.1.4.53 GO:0004114 ... Q08499 27933955
    366390 5k1i:A (2.61) BS02 ZN 3.1.4.53 GO:0004114 ... Q08499 27933955
    366391 5k1i:A (2.61) BS03 MG 3.1.4.53 GO:0004114 ... Q08499 27933955
    366392 5k1i:B (2.61) BS01 6PT 3.1.4.53 GO:0004114 ... Q08499 27933955
    366393 5k1i:B (2.61) BS02 ZN 3.1.4.53 GO:0004114 ... Q08499 27933955
    366394 5k1i:B (2.61) BS03 MG 3.1.4.53 GO:0004114 ... Q08499 27933955
    366395 5k1i:C (2.61) BS01 6PT 3.1.4.53 GO:0004114 ... Q08499 27933955
    366396 5k1i:C (2.61) BS02 ZN 3.1.4.53 GO:0004114 ... Q08499 27933955
    366397 5k1i:D (2.61) BS01 6PT 3.1.4.53 GO:0004114 ... Q08499 27933955
    366398 5k1i:D (2.61) BS02 ZN 3.1.4.53 GO:0004114 ... Q08499 27933955
    366399 5k1i:E (2.61) BS01 6PT 3.1.4.53 GO:0004114 ... Q08499 27933955
    366400 5k1i:E (2.61) BS02 ZN 3.1.4.53 GO:0004114 ... Q08499 27933955

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).