SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    367001 5k83:C (2.39) BS01 dna 3.5.4.-
    3.5.4.38
    GO:0003824 ... M1GSK9 27480941
    367002 5k83:C (2.39) BS02 ZN 3.5.4.-
    3.5.4.38
    GO:0003824 ... M1GSK9 27480941
    367003 5k83:D (2.39) BS01 ZN 3.5.4.-
    3.5.4.38
    GO:0003824 ... M1GSK9 27480941
    367004 5k83:E (2.39) BS01 dna 3.5.4.-
    3.5.4.38
    GO:0003824 ... M1GSK9 27480941
    367005 5k83:E (2.39) BS02 ZN 3.5.4.-
    3.5.4.38
    GO:0003824 ... M1GSK9 27480941
    367006 5k83:F (2.39) BS01 ZN 3.5.4.-
    3.5.4.38
    GO:0003824 ... M1GSK9 27480941
    367007 5k84:A (1.78) BS01 CU 1.10.3.2 GO:0005507 ... Q72HW2 N/A
    367008 5k84:A (1.78) BS02 CU 1.10.3.2 GO:0005507 ... Q72HW2 N/A
    367009 5k84:A (1.78) BS03 CU 1.10.3.2 GO:0005507 ... Q72HW2 N/A
    367010 5k85:A (2.3) BS01 PRX 6.2.1.1 GO:0003987 ... J9VFT1 N/A
    367011 5k85:B (2.3) BS01 PRX 6.2.1.1 GO:0003987 ... J9VFT1 N/A
    367012 5k85:C (2.3) BS01 COA 6.2.1.1 GO:0003987 ... J9VFT1 N/A
    367013 5k85:C (2.3) BS02 PRX 6.2.1.1 GO:0003987 ... J9VFT1 N/A
    367014 5k87:A (1.219) BS01 MLI 5.3.3.- GO:0016853 ... Q8EJW4 29145506
    367015 5k87:A (1.219) BS02 MLI 5.3.3.- GO:0016853 ... Q8EJW4 29145506
    367016 5k87:B (1.219) BS01 MLI 5.3.3.- GO:0016853 ... Q8EJW4 29145506
    367017 5k87:B (1.219) BS02 MLI 5.3.3.- GO:0016853 ... Q8EJW4 29145506
    367018 5k89:A (2.249) BS01 CA ? GO:0005509 ... P23297 28368280
    367019 5k89:A (2.249) BS02 CA ? GO:0005509 ... P23297 28368280
    367020 5k89:C (2.249) BS01 CA ? GO:0005509 ... P23297 28368280
    367021 5k89:C (2.249) BS02 CA ? GO:0005509 ... P23297 28368280
    367022 5k89:H (2.249) BS01 CA ? GO:0005509 ... P23297 28368280
    367023 5k89:H (2.249) BS02 CA ? GO:0005509 ... P23297 28368280
    367024 5k8b:A (2.15) BS01 PDG 2.6.1.109 GO:0000271 ... Q8EEB1 27275764
    367025 5k8b:A (2.15) BS02 PDG 2.6.1.109 GO:0000271 ... Q8EEB1 27275764
    367026 5k8b:B (2.15) BS01 PDG 2.6.1.109 GO:0000271 ... Q8EEB1 27275764
    367027 5k8b:B (2.15) BS02 PDG 2.6.1.109 GO:0000271 ... Q8EEB1 27275764
    367028 5k8b:C (2.15) BS01 PDG 2.6.1.109 GO:0000271 ... Q8EEB1 27275764
    367029 5k8b:C (2.15) BS02 PDG 2.6.1.109 GO:0000271 ... Q8EEB1 27275764
    367030 5k8b:D (2.15) BS01 PDG 2.6.1.109 GO:0000271 ... Q8EEB1 27275764
    367031 5k8b:D (2.15) BS02 PDG 2.6.1.109 GO:0000271 ... Q8EEB1 27275764
    367032 5k8c:A (1.85) BS01 NAD 1.1.3.48 GO:0004022 ... Q8EEB0 27275764
    367033 5k8c:A (1.85) BS02 PO4 1.1.3.48 GO:0004022 ... Q8EEB0 27275764
    367034 5k8c:A (1.85) BS03 ZN 1.1.3.48 GO:0004022 ... Q8EEB0 27275764
    367035 5k8d:A (4.19) BS01 CA ? GO:0005507 ... P00451 28397397
    367036 5k8d:A (4.19) BS02 CA ? GO:0005507 ... P00451 28397397
    367037 5k8d:A (4.19) BS03 CA ? GO:0005507 ... P00451 28397397
    367038 5k8d:A (4.19) BS04 CU ? GO:0005507 ... P00451 28397397
    367039 5k8d:B (4.19) BS01 CU ? GO:0005507 ... P00451
    P01857
    28397397
    367040 5k8e:A (1.93) BS01 FAD 1.1.3.- GO:0016491 ... G2QG48 27629413
    367041 5k8f:A (2.45) BS01 ATP 6.2.1.1 GO:0003987 ... J9VFT1 N/A
    367042 5k8f:A (2.45) BS02 6R9 6.2.1.1 GO:0003987 ... J9VFT1 N/A
    367043 5k8f:B (2.45) BS01 ATP 6.2.1.1 GO:0003987 ... J9VFT1 N/A
    367044 5k8f:B (2.45) BS02 6R9 6.2.1.1 GO:0003987 ... J9VFT1 N/A
    367045 5k8f:C (2.45) BS01 ATP 6.2.1.1 GO:0003987 ... J9VFT1 N/A
    367046 5k8f:C (2.45) BS02 6R9 6.2.1.1 GO:0003987 ... J9VFT1 N/A
    367047 5k8f:C (2.45) BS03 MG 6.2.1.1 GO:0003987 ... J9VFT1 N/A
    367048 5k8g:A (2.0) BS01 CA ? N/A A1YIY3 28808685
    367049 5k8g:A (2.0) BS02 CA ? N/A A1YIY3 28808685
    367050 5k8g:A (2.0) BS03 CA ? N/A A1YIY3 28808685
    367051 5k8g:A (2.0) BS04 CA ? N/A A1YIY3 28808685
    367052 5k8g:A (2.0) BS05 CA ? N/A A1YIY3 28808685
    367053 5k8g:A (2.0) BS06 CA ? N/A A1YIY3 28808685
    367054 5k8g:A (2.0) BS07 CA ? N/A A1YIY3 28808685
    367055 5k8g:A (2.0) BS08 CA ? N/A A1YIY3 28808685
    367056 5k8g:A (2.0) BS09 CA ? N/A A1YIY3 28808685
    367057 5k8g:A (2.0) BS10 CA ? N/A A1YIY3 28808685
    367058 5k8g:A (2.0) BS11 CA ? N/A A1YIY3 28808685
    367059 5k8g:A (2.0) BS12 CA ? N/A A1YIY3 28808685
    367060 5k8g:A (2.0) BS13 CA ? N/A A1YIY3 28808685
    367061 5k8g:A (2.0) BS14 CA ? N/A A1YIY3 28808685
    367062 5k8i:A (1.694) BS01 ATP 3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004386 ... A0A146CJG7 27915293
    367063 5k8i:A (1.694) BS02 MN 3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004386 ... A0A146CJG7 27915293
    367064 5k8k:A (2.55) BS01 MN 3.6.1.54 GO:0005737 ... P44046 27780190
    367065 5k8k:A (2.55) BS02 MN 3.6.1.54 GO:0005737 ... P44046 27780190
    367066 5k8k:A (2.55) BS03 LP5 3.6.1.54 GO:0005737 ... P44046 27780190
    367067 5k8l:A (1.751) BS01 GSP 3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004386 ... A0A146CJG7 27915293
    367068 5k8n:A (3.225) BS01 6R6 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367069 5k8n:A (3.225) BS02 6R6 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367070 5k8n:B (3.225) BS01 6R6 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367071 5k8n:C (3.225) BS01 6R6 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367072 5k8n:D (3.225) BS01 6R6 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367073 5k8n:D (3.225) BS02 6R6 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367074 5k8n:E (3.225) BS01 6R6 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367075 5k8n:E (3.225) BS02 6R6 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367076 5k8n:F (3.225) BS01 6R6 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367077 5k8n:F (3.225) BS02 6R6 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367078 5k8n:G (3.225) BS01 6R6 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367079 5k8n:G (3.225) BS02 6R6 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367080 5k8n:H (3.225) BS01 6R6 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367081 5k8n:H (3.225) BS02 6R6 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367082 5k8o:A (2.893) BS01 MN 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367083 5k8o:A (2.893) BS02 6R7 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367084 5k8o:A (2.893) BS03 6R7 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367085 5k8o:B (2.893) BS01 MN 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367086 5k8o:B (2.893) BS02 6R7 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367087 5k8o:B (2.893) BS03 6R7 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367088 5k8o:C (2.893) BS01 MN 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367089 5k8o:C (2.893) BS02 6R7 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367090 5k8o:C (2.893) BS03 6R7 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367091 5k8o:D (2.893) BS01 6R7 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367092 5k8o:D (2.893) BS02 MN 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367093 5k8o:D (2.893) BS03 6R7 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367094 5k8o:E (2.893) BS01 6R7 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367095 5k8o:E (2.893) BS02 MN 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367096 5k8o:E (2.893) BS03 6R7 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367097 5k8o:F (2.893) BS01 MN 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367098 5k8o:F (2.893) BS02 6R7 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367099 5k8o:F (2.893) BS03 6R7 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367100 5k8o:G (2.893) BS01 6R7 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367101 5k8o:G (2.893) BS02 MN 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367102 5k8o:G (2.893) BS03 6R7 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367103 5k8o:H (2.893) BS01 6R7 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367104 5k8o:H (2.893) BS02 MN 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367105 5k8o:H (2.893) BS03 6R7 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367106 5k8p:A (2.2) BS01 ZN 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367107 5k8p:A (2.2) BS02 6R8 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367108 5k8p:B (2.2) BS01 ZN 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367109 5k8p:B (2.2) BS02 6R8 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367110 5k8p:C (2.2) BS01 ZN 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367111 5k8p:C (2.2) BS02 6R8 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367112 5k8p:D (2.2) BS01 ZN 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367113 5k8p:D (2.2) BS02 6R8 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367114 5k8p:E (2.2) BS01 ZN 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367115 5k8p:E (2.2) BS02 6R8 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367116 5k8p:F (2.2) BS01 6R8 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367117 5k8p:F (2.2) BS02 ZN 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367118 5k8p:G (2.2) BS01 ZN 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367119 5k8p:G (2.2) BS02 6R8 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367120 5k8p:G (2.2) BS03 6R8 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367121 5k8p:H (2.2) BS01 ZN 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367122 5k8p:H (2.2) BS02 6R8 3.5.99.8 GO:0016787 ... D3WZ85 27694799
    367123 5k8q:A (1.739) BS01 peptide ? GO:0000086 ... P0DP23 27563101
    367124 5k8q:A (1.739) BS02 CA ? GO:0000086 ... P0DP23 27563101
    367125 5k8q:A (1.739) BS03 CA ? GO:0000086 ... P0DP23 27563101
    367126 5k8q:A (1.739) BS04 CA ? GO:0000086 ... P0DP23 27563101
    367127 5k8q:A (1.739) BS05 CA ? GO:0000086 ... P0DP23 27563101
    367128 5k8r:A (2.5) BS01 CA ? GO:0005509 ... Q9Y5G1 27472898
    367129 5k8r:A (2.5) BS02 CA ? GO:0005509 ... Q9Y5G1 27472898
    367130 5k8r:A (2.5) BS03 CA ? GO:0005509 ... Q9Y5G1 27472898
    367131 5k8r:A (2.5) BS04 CA ? GO:0005509 ... Q9Y5G1 27472898
    367132 5k8r:A (2.5) BS05 CA ? GO:0005509 ... Q9Y5G1 27472898
    367133 5k8r:A (2.5) BS06 CA ? GO:0005509 ... Q9Y5G1 27472898
    367134 5k8r:A (2.5) BS07 CA ? GO:0005509 ... Q9Y5G1 27472898
    367135 5k8r:A (2.5) BS08 CA ? GO:0005509 ... Q9Y5G1 27472898
    367136 5k8r:A (2.5) BS09 CA ? GO:0005509 ... Q9Y5G1 27472898
    367137 5k8s:A (1.15) BS01 CMP 2.7.11.11 GO:0005952 ... Q7KQK0 27738107 MOAD: Kd=6nM
    367138 5k8s:B (1.15) BS01 CMP 2.7.11.11 GO:0005952 ... Q7KQK0 27738107 MOAD: Kd=6nM
    367139 5k8t:A (1.848) BS01 GSP 3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004386 ... A0A146CJG7 27915293
    367140 5k8t:A (1.848) BS02 MG 3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004386 ... A0A146CJG7 27915293
    367141 5k8u:A (1.601) BS01 ADP 3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004386 ... A0A146CJG7 27915293
    367142 5k8u:A (1.601) BS02 MN 3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004386 ... A0A146CJG7 27915293
    367143 5k8v:A (2.25) BS01 6RE 2.1.1.319 GO:0016274 ... Q9WVG6 27879050 MOAD: ic50=460nM
    367144 5k8v:B (2.25) BS01 6RE 2.1.1.319 GO:0016274 ... Q9WVG6 27879050 MOAD: ic50=460nM
    367145 5k8v:C (2.25) BS01 6RE 2.1.1.319 GO:0016274 ... Q9WVG6 27879050 MOAD: ic50=460nM
    367146 5k8v:D (2.25) BS01 6RE 2.1.1.319 GO:0016274 ... Q9WVG6 27879050 MOAD: ic50=460nM
    367147 5k8w:A (2.1) BS01 GJV 2.1.1.319 GO:0016274 ... Q9WVG6 N/A
    367148 5k8w:A (2.1) BS02 DXE 2.1.1.319 GO:0016274 ... Q9WVG6 N/A
    367149 5k8w:B (2.1) BS01 GJV 2.1.1.319 GO:0016274 ... Q9WVG6 N/A
    367150 5k8w:C (2.1) BS01 GJV 2.1.1.319 GO:0016274 ... Q9WVG6 N/A
    367151 5k8w:D (2.1) BS01 GJV 2.1.1.319 GO:0016274 ... Q9WVG6 N/A
    367152 5k8x:A (1.991) BS01 6ZH 2.1.1.319 GO:0016274 ... Q9WVG6 N/A
    367153 5k8x:B (1.991) BS01 6ZH 2.1.1.319 GO:0016274 ... Q9WVG6 N/A
    367154 5k8x:C (1.991) BS01 6ZH 2.1.1.319 GO:0016274 ... Q9WVG6 N/A
    367155 5k8x:C (1.991) BS02 DXE 2.1.1.319 GO:0016274 ... Q9WVG6 N/A
    367156 5k8x:D (1.991) BS01 6ZH 2.1.1.319 GO:0016274 ... Q9WVG6 N/A
    367157 5k8x:D (1.991) BS02 DXE 2.1.1.319 GO:0016274 ... Q9WVG6 N/A
    367158 5k8y:A (2.4) BS01 CA ? N/A Q8VBX4 27903635
    367159 5k8y:B (2.4) BS01 CA ? N/A Q8VBX4 27903635
    367160 5k8z:A (1.55) BS01 HEM ? GO:0016491 ... B8HNS6 29142780
    367161 5k8z:B (1.55) BS01 HEM ? GO:0016491 ... B8HNS6 29142780
    367162 5k8z:C (1.55) BS01 HEM ? GO:0016491 ... B8HNS6 29142780
    367163 5k8z:D (1.55) BS01 HEM ? GO:0016491 ... B8HNS6 29142780
    367164 5k90:A (1.28) BS01 IS8 ? GO:0016491 ... B8HNS6 29142780
    367165 5k90:A (1.28) BS02 HEM ? GO:0016491 ... B8HNS6 29142780
    367166 5k90:B (1.28) BS01 HEM ? GO:0016491 ... B8HNS6 29142780
    367167 5k90:B (1.28) BS02 IS8 ? GO:0016491 ... B8HNS6 29142780
    367168 5k90:C (1.28) BS01 IS8 ? GO:0016491 ... B8HNS6 29142780
    367169 5k90:C (1.28) BS02 HEM ? GO:0016491 ... B8HNS6 29142780
    367170 5k90:D (1.28) BS01 HEM ? GO:0016491 ... B8HNS6 29142780
    367171 5k90:D (1.28) BS02 IS8 ? GO:0016491 ... B8HNS6 29142780
    367172 5k91:A (1.18) BS01 HEM ? GO:0016491 ... B8HNS6 29142780
    367173 5k91:B (1.18) BS01 HEM ? GO:0016491 ... B8HNS6 29142780
    367174 5k91:C (1.18) BS01 HEM ? GO:0016491 ... B8HNS6 29142780
    367175 5k91:D (1.18) BS01 HEM ? GO:0016491 ... B8HNS6 29142780
    367176 5k95:A (2.77) BS01 8GT 3.5.4.16 GO:0003933 ... Q5F9K6 28126741
    367177 5k95:B (2.77) BS01 8GT 3.5.4.16 GO:0003933 ... Q5F9K6 28126741
    367178 5k95:B (2.77) BS02 ZN 3.5.4.16 GO:0003933 ... Q5F9K6 28126741
    367179 5k97:A (2.102) BS01 dna 3.1.-.- GO:0003677 ... P39748 28653660
    367180 5k97:A (2.102) BS02 dna 3.1.-.- GO:0003677 ... P39748 28653660
    367181 5k97:A (2.102) BS03 dna 3.1.-.- GO:0003677 ... P39748 28653660
    367182 5k97:A (2.102) BS04 dna 3.1.-.- GO:0003677 ... P39748 28653660
    367183 5k98:B (3.99) BS01 dna ? GO:0000976 ... P23873 26222023
    367184 5k98:B (3.99) BS02 dna ? GO:0000976 ... P23873 26222023
    367185 5k98:P (3.99) BS01 dna ? GO:0000976 ... P23873 26222023
    367186 5k98:P (3.99) BS02 dna ? GO:0000976 ... P23873 26222023
    367187 5k99:A (1.5) BS01 peptide ? GO:0000166 ... A0A6L8PEJ7 N/A
    367188 5k99:B (1.5) BS01 peptide ? GO:0000166 ... A0A6L8PEJ7 N/A
    367189 5k9b:A (1.174) BS01 FMN ? GO:0009055 ... P00324 28710816
    367190 5k9c:A (1.66) BS01 FNR 1.3.5.2 GO:0004151 ... Q02127 27994748
    367191 5k9c:A (1.66) BS02 MLJ 1.3.5.2 GO:0004151 ... Q02127 27994748 MOAD: ic50=0.56uM
    367192 5k9d:A (1.7) BS01 FNR 1.3.5.2 GO:0004151 ... Q02127 27994748
    367193 5k9g:A (1.9) BS01 ZN 3.5.4.16 GO:0003933 ... Q5F9K6 28126741
    367194 5k9g:B (1.9) BS01 ZN 3.5.4.16 GO:0003933 ... Q5F9K6 28126741
    367195 5k9h:A (2.029) BS01 GOL ? GO:0004553 ... A0A1D5B391 27710940
    367196 5k9h:A (2.029) BS02 GOL ? GO:0004553 ... A0A1D5B391 27710940
    367197 5k9h:A (2.029) BS03 GOL ? GO:0004553 ... A0A1D5B391 27710940
    367198 5k9h:A (2.029) BS04 GOL ? GO:0004553 ... A0A1D5B391 27710940
    367199 5k9h:A (2.029) BS05 GOL ? GO:0004553 ... A0A1D5B391 27710940
    367200 5k9i:A (2.5) BS01 O44 2.7.10.2 GO:0004672 ... P00523 28051857

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).