SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    368601 5kl0:A (1.853) BS01 G16 N/A GO:0000287 ... N/A 27567706
    368602 5kl0:A (1.853) BS02 MG N/A GO:0000287 ... N/A 27567706
    368603 5kl1:A (3.701) BS01 rna ? GO:0003723 ... P25822 27482653
    368604 5kl1:B (3.701) BS01 rna ? GO:0003723 ... P25724 27482653
    368605 5kl1:B (3.701) BS02 ZN ? GO:0003723 ... P25724 27482653
    368606 5kl1:B (3.701) BS03 ZN ? GO:0003723 ... P25724 27482653
    368607 5kl2:A (1.692) BS01 dna ? N/A P19544 27596598
    368608 5kl2:A (1.692) BS02 dna ? N/A P19544 27596598
    368609 5kl2:A (1.692) BS03 ZN ? N/A P19544 27596598
    368610 5kl2:A (1.692) BS04 ZN ? N/A P19544 27596598
    368611 5kl2:A (1.692) BS05 ZN ? N/A P19544 27596598
    368612 5kl3:A (1.449) BS01 dna ? N/A P19544 27596598
    368613 5kl3:A (1.449) BS02 dna ? N/A P19544 27596598
    368614 5kl3:A (1.449) BS03 ZN ? N/A P19544 27596598
    368615 5kl3:A (1.449) BS04 ZN ? N/A P19544 27596598
    368616 5kl3:A (1.449) BS05 ZN ? N/A P19544 27596598
    368617 5kl4:A (1.783) BS01 dna ? N/A P19544 27596598
    368618 5kl4:A (1.783) BS02 dna ? N/A P19544 27596598
    368619 5kl4:A (1.783) BS03 ZN ? N/A P19544 27596598
    368620 5kl4:A (1.783) BS04 ZN ? N/A P19544 27596598
    368621 5kl4:A (1.783) BS05 ZN ? N/A P19544 27596598
    368622 5kl4:A (1.783) BS06 CA ? N/A P19544 27596598
    368623 5kl4:D (1.783) BS01 dna ? N/A P19544 27596598
    368624 5kl4:D (1.783) BS02 dna ? N/A P19544 27596598
    368625 5kl4:D (1.783) BS03 ZN ? N/A P19544 27596598
    368626 5kl4:D (1.783) BS04 ZN ? N/A P19544 27596598
    368627 5kl4:D (1.783) BS05 ZN ? N/A P19544 27596598
    368628 5kl4:D (1.783) BS06 CA ? N/A P19544 27596598
    368629 5kl5:A (2.289) BS01 dna ? N/A P19544 27596598
    368630 5kl5:A (2.289) BS02 dna ? N/A P19544 27596598
    368631 5kl5:A (2.289) BS03 ZN ? N/A P19544 27596598
    368632 5kl5:A (2.289) BS04 ZN ? N/A P19544 27596598
    368633 5kl5:A (2.289) BS05 ZN ? N/A P19544 27596598
    368634 5kl6:A (1.641) BS01 dna ? N/A P19544 27596598
    368635 5kl6:A (1.641) BS02 dna ? N/A P19544 27596598
    368636 5kl6:A (1.641) BS03 ZN ? N/A P19544 27596598
    368637 5kl6:A (1.641) BS04 ZN ? N/A P19544 27596598
    368638 5kl6:A (1.641) BS05 ZN ? N/A P19544 27596598
    368639 5kl7:A (1.579) BS01 dna ? N/A P19544 27596598
    368640 5kl7:A (1.579) BS02 dna ? N/A P19544 27596598
    368641 5kl7:A (1.579) BS03 ZN ? N/A P19544 27596598
    368642 5kl7:A (1.579) BS04 ZN ? N/A P19544 27596598
    368643 5kl7:A (1.579) BS05 ZN ? N/A P19544 27596598
    368644 5kl8:A (4.0) BS01 rna ? GO:0003723 ... P25822 27482653
    368645 5kl8:B (4.0) BS01 rna ? GO:0003723 ... P25724 27482653
    368646 5kl8:B (4.0) BS02 ZN ? GO:0003723 ... P25724 27482653
    368647 5kl8:B (4.0) BS03 ZN ? GO:0003723 ... P25724 27482653
    368648 5kl9:A (2.22) BS01 COA 3.1.2.- GO:0005515 ... P0A8Z3 N/A
    368649 5kl9:A (2.22) BS02 COA 3.1.2.- GO:0005515 ... P0A8Z3 N/A
    368650 5kl9:D (2.22) BS01 COA 3.1.2.- GO:0005515 ... P0A8Z3 N/A
    368651 5kl9:D (2.22) BS02 COA 3.1.2.- GO:0005515 ... P0A8Z3 N/A
    368652 5kla:A (1.14) BS01 rna ? GO:0003723 ... P25822 27482653
    368653 5klb:A (2.7) BS01 CA ? GO:0001518 ... A8EVM5 27556947
    368654 5klb:B (2.7) BS01 CA ? GO:0001518 ... A8EVM5 27556947
    368655 5klb:C (2.7) BS01 CA ? GO:0001518 ... A8EVM5 27556947
    368656 5klb:D (2.7) BS01 CA ? GO:0001518 ... A8EVM5 27556947
    368657 5kle:A (1.5) BS01 BGC ? N/A A0A0R5P8X1 27621314
    368658 5kle:A (1.5) BS02 BGC ? N/A A0A0R5P8X1 27621314
    368659 5klf:A (1.801) BS01 BGC ? N/A A0A0R5P8X1 27621314
    368660 5klf:A (1.801) BS02 BGC ? N/A A0A0R5P8X1 27621314
    368661 5klg:C (3.3) BS01 6UC ? GO:0001518 ... A8EVM5 27556947
    368662 5klg:D (3.3) BS01 CA ? GO:0001518 ... A8EVM5 27556947
    368663 5klg:D (3.3) BS02 6UC ? GO:0001518 ... A8EVM5 27556947
    368664 5kli:A (2.996) BS01 HEM ? GO:0005886 ... Q02761 27758861
    368665 5kli:A (2.996) BS02 HEM ? GO:0005886 ... Q02761 27758861
    368666 5kli:A (2.996) BS03 SMA ? GO:0005886 ... Q02761 27758861
    368667 5kli:A (2.996) BS04 ANJ ? GO:0005886 ... Q02761 27758861
    368668 5kli:A (2.996) BS05 LOP ? GO:0005886 ... Q02761 27758861
    368669 5kli:B (2.996) BS01 HEC ? GO:0005886 ... Q02760 27758861
    368670 5kli:C (2.996) BS01 FES 7.1.1.8 GO:0005886 ... Q02762 27758861
    368671 5kli:C (2.996) BS02 SMA 7.1.1.8 GO:0005886 ... Q02762 27758861
    368672 5kli:E (2.996) BS01 HEM ? GO:0005886 ... Q02761 27758861
    368673 5kli:E (2.996) BS02 HEM ? GO:0005886 ... Q02761 27758861
    368674 5kli:E (2.996) BS03 SMA ? GO:0005886 ... Q02761 27758861
    368675 5kli:E (2.996) BS04 ANJ ? GO:0005886 ... Q02761 27758861
    368676 5kli:E (2.996) BS05 LOP ? GO:0005886 ... Q02761 27758861
    368677 5kli:F (2.996) BS01 HEC ? GO:0005886 ... Q02760 27758861
    368678 5kli:G (2.996) BS01 FES 7.1.1.8 GO:0005886 ... Q02762 27758861
    368679 5kli:K (2.996) BS01 HEM ? GO:0005886 ... Q02761 27758861
    368680 5kli:K (2.996) BS02 HEM ? GO:0005886 ... Q02761 27758861
    368681 5kli:K (2.996) BS03 SMA ? GO:0005886 ... Q02761 27758861
    368682 5kli:K (2.996) BS04 ANJ ? GO:0005886 ... Q02761 27758861
    368683 5kli:K (2.996) BS05 LOP ? GO:0005886 ... Q02761 27758861
    368684 5kli:L (2.996) BS01 HEC ? GO:0005886 ... Q02760 27758861
    368685 5kli:M (2.996) BS01 FES 7.1.1.8 GO:0005886 ... Q02762 27758861
    368686 5kli:M (2.996) BS02 SMA 7.1.1.8 GO:0005886 ... Q02762 27758861
    368687 5kli:O (2.996) BS01 HEM ? GO:0005886 ... Q02761 27758861
    368688 5kli:O (2.996) BS02 HEM ? GO:0005886 ... Q02761 27758861
    368689 5kli:O (2.996) BS03 SMA ? GO:0005886 ... Q02761 27758861
    368690 5kli:O (2.996) BS04 ANJ ? GO:0005886 ... Q02761 27758861
    368691 5kli:O (2.996) BS05 LOP ? GO:0005886 ... Q02761 27758861
    368692 5kli:P (2.996) BS01 HEC ? GO:0005886 ... Q02760 27758861
    368693 5kli:Q (2.996) BS01 FES 7.1.1.8 GO:0005886 ... Q02762 27758861
    368694 5klk:A (2.006) BS01 NAD ? GO:0000166 ... Q83V33 27810899
    368695 5klk:A (2.006) BS02 6OH ? GO:0000166 ... Q83V33 27810899
    368696 5klk:B (2.006) BS01 NAD ? GO:0000166 ... Q83V33 27810899
    368697 5klk:B (2.006) BS02 6OH ? GO:0000166 ... Q83V33 27810899
    368698 5klk:C (2.006) BS01 NAD ? GO:0000166 ... Q83V33 27810899
    368699 5klk:C (2.006) BS02 6OH ? GO:0000166 ... Q83V33 27810899
    368700 5klk:D (2.006) BS01 NAD ? GO:0000166 ... Q83V33 27810899
    368701 5kll:A (2.17) BS01 6UN ? GO:0000166 ... Q83V33 27810899
    368702 5kll:B (2.17) BS01 6UN ? GO:0000166 ... Q83V33 27810899
    368703 5kll:C (2.17) BS01 6UN ? GO:0000166 ... Q83V33 27810899
    368704 5kll:D (2.17) BS01 6UN ? GO:0000166 ... Q83V33 27810899
    368705 5klm:A (2.102) BS01 NAD ? GO:0000166 ... Q83V33 27810899
    368706 5klm:B (2.102) BS01 NAD ? GO:0000166 ... Q83V33 27810899
    368707 5klm:C (2.102) BS01 NAD ? GO:0000166 ... Q83V33 27810899
    368708 5klm:D (2.102) BS01 NAD ? GO:0000166 ... Q83V33 27810899
    368709 5kln:A (1.992) BS01 NAD ? GO:0000166 ... Q83V33 27810899
    368710 5kln:B (1.992) BS01 NAD ? GO:0000166 ... Q83V33 27810899
    368711 5kln:C (1.992) BS01 NAD ? GO:0000166 ... Q83V33 27810899
    368712 5kln:D (1.992) BS01 NAD ? GO:0000166 ... Q83V33 27810899
    368713 5klo:A (1.79) BS01 2VS ? GO:0000166 ... Q83V33 27810899
    368714 5klo:A (1.79) BS02 NAD ? GO:0000166 ... Q83V33 27810899
    368715 5klo:B (1.79) BS01 2VS ? GO:0000166 ... Q83V33 27810899
    368716 5klo:B (1.79) BS02 NAD ? GO:0000166 ... Q83V33 27810899
    368717 5klo:C (1.79) BS01 2VS ? GO:0000166 ... Q83V33 27810899
    368718 5klo:C (1.79) BS02 NAD ? GO:0000166 ... Q83V33 27810899
    368719 5klo:D (1.79) BS01 2VS ? GO:0000166 ... Q83V33 27810899
    368720 5klo:D (1.79) BS02 NAD ? GO:0000166 ... Q83V33 27810899
    368721 5klp:A (2.002) BS01 IHP 2.3.1.- GO:0000822 ... Q6VE93 27525589 MOAD: Kd=22.7uM
    368722 5klp:B (2.002) BS01 IHP 2.3.1.- GO:0000822 ... Q6VE93 27525589 MOAD: Kd=22.7uM
    368723 5klp:C (2.002) BS01 IHP 2.3.1.- GO:0000822 ... Q6VE93 27525589 MOAD: Kd=22.7uM
    368724 5klq:A (3.4) BS01 IHP 2.3.1.- GO:0000822 ... Q6VE93 27525589
    368725 5klq:A (3.4) BS02 COA 2.3.1.- GO:0000822 ... Q6VE93 27525589
    368726 5klq:B (3.4) BS01 IHP 2.3.1.- GO:0000822 ... Q6VE93 27525589
    368727 5klq:B (3.4) BS02 COA 2.3.1.- GO:0000822 ... Q6VE93 27525589
    368728 5klq:C (3.4) BS01 IHP 2.3.1.- GO:0000822 ... Q6VE93 27525589
    368729 5klq:C (3.4) BS02 COA 2.3.1.- GO:0000822 ... Q6VE93 27525589
    368730 5klr:B (2.2) BS01 peptide ? GO:0005737 ... P52293 29750988
    368731 5kls:C (3.299) BS01 6UC ? GO:0001518 ... A8EVM5 27556947
    368732 5klt:B (2.6) BS01 peptide ? GO:0005737 ... P52293 29750988
    368733 5klu:A (1.99) BS01 HEC ? GO:0005515 ... P00044 27990813
    368734 5klu:A (1.99) BS02 6UZ ? GO:0005515 ... P00044 27990813
    368735 5klu:A (1.99) BS03 HEC ? GO:0005515 ... P00044 27990813
    368736 5klu:B (1.99) BS01 HEC ? GO:0005515 ... P00044 27990813
    368737 5klu:B (1.99) BS02 HEC ? GO:0005515 ... P00044 27990813
    368738 5klu:B (1.99) BS03 6UZ ? GO:0005515 ... P00044 27990813
    368739 5klv:C (2.652) BS01 HEM ? GO:0005739 ... P00157 27758861
    368740 5klv:C (2.652) BS02 HEM ? GO:0005739 ... P00157 27758861
    368741 5klv:C (2.652) BS03 FNM ? GO:0005739 ... P00157 27758861
    368742 5klv:D (2.652) BS01 HEC 7.1.1.8 GO:0009055 ... P00125 27758861
    368743 5klv:E (2.652) BS01 FES 7.1.1.8 GO:0008121 ... P13272 27758861
    368744 5klx:A (2.45) BS01 6UO 5.2.1.8 GO:0003755 ... Q12306
    Q3JK38
    N/A
    368745 5klx:A (2.45) BS02 MG 5.2.1.8 GO:0003755 ... Q12306
    Q3JK38
    N/A
    368746 5klx:B (2.45) BS01 6UO 5.2.1.8 GO:0003755 ... Q12306
    Q3JK38
    N/A
    368747 5klx:B (2.45) BS02 MG 5.2.1.8 GO:0003755 ... Q12306
    Q3JK38
    N/A
    368748 5klx:C (2.45) BS01 6UO 5.2.1.8 GO:0003755 ... Q12306
    Q3JK38
    N/A
    368749 5klx:D (2.45) BS01 6UO 5.2.1.8 GO:0003755 ... Q12306
    Q3JK38
    N/A
    368750 5klx:D (2.45) BS02 6UO 5.2.1.8 GO:0003755 ... Q12306
    Q3JK38
    N/A
    368751 5klx:D (2.45) BS03 MG 5.2.1.8 GO:0003755 ... Q12306
    Q3JK38
    N/A
    368752 5kly:A (1.3) BS01 6UR 3.4.22.-
    3.9.1.-
    GO:0000118 ... P49773 28968488
    368753 5kly:B (1.3) BS01 6UR 3.4.22.-
    3.9.1.-
    GO:0000118 ... P49773 28968488
    368754 5klz:B (1.5) BS01 AMP 3.4.22.-
    3.9.1.-
    GO:0000118 ... P49773 28968488
    368755 5km0:A (1.533) BS01 IMP 3.4.22.-
    3.9.1.-
    GO:0000118 ... P49773 28968488
    368756 5km0:D (1.533) BS01 IMP 3.4.22.-
    3.9.1.-
    GO:0000118 ... P49773 28968488
    368757 5km1:A (1.65) BS01 5GP 3.4.22.-
    3.9.1.-
    GO:0000118 ... P49773 28968488
    368758 5km2:A (1.25) BS01 C5P 3.4.22.-
    3.9.1.-
    GO:0000118 ... P49773 28968488
    368759 5km3:A (1.2) BS01 U5P 3.4.22.-
    3.9.1.-
    GO:0000118 ... P49773 28968488
    368760 5km4:A (1.4) BS01 IU 3.4.22.-
    3.9.1.-
    GO:0000118 ... P49773 28968488
    368761 5km5:B (2.1) BS01 TR5 3.9.1.- GO:0003824 ... Q9BX68 28968488
    368762 5km6:A (1.6) BS01 6US 3.4.22.-
    3.9.1.-
    GO:0000118 ... P49773 28968488
    368763 5km8:B (2.0) BS01 L8P 3.9.1.- GO:0003824 ... Q9BX68 28968488
    368764 5km9:B (1.45) BS01 ADN 3.9.1.- GO:0003824 ... Q9BX68 28968488
    368765 5kma:A (1.55) BS01 777 3.4.22.-
    3.9.1.-
    GO:0000118 ... P49773 28968488
    368766 5kmb:A (1.6) BS01 6UT 3.4.22.-
    3.9.1.-
    GO:0000118 ... P49773 28968488
    368767 5kmb:B (1.6) BS01 6UT 3.4.22.-
    3.9.1.-
    GO:0000118 ... P49773 28968488
    368768 5kmc:A (1.35) BS01 6UU 3.4.22.-
    3.9.1.-
    GO:0000118 ... P49773 N/A
    368769 5kmf:A (3.2) BS01 6U9 ? GO:0001518 ... A8EVM5 27556947
    368770 5kmg:A (3.5) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 27493215
    368771 5kmg:B (3.5) BS01 GDP ? GO:0000226 ... P02554 27493215
    368772 5kmg:B (3.5) BS02 POU ? GO:0000226 ... P02554 27493215
    368773 5kmh:A (3.2) BS01 CA ? GO:0001518 ... A8EVM5 27556947
    368774 5kmi:A (1.87) BS01 6UE 2.7.10.1 GO:0004672 ... P04629 28039433 BindingDB: IC50=99nM
    368775 5kmj:A (2.04) BS01 6UF 2.7.10.1 GO:0004672 ... P04629 28039433 BindingDB: IC50=607nM
    368776 5kmk:A (2.24) BS01 6UG 2.7.10.1 GO:0004672 ... P04629 28039433 BindingDB: IC50=3300nM
    368777 5kml:A (2.01) BS01 6UH 2.7.10.1 GO:0004672 ... P04629 28039433 BindingDB: IC50=350nM
    368778 5kmm:A (2.12) BS01 6UJ 2.7.10.1 GO:0004672 ... P04629 28039433 BindingDB: IC50=4100nM
    368779 5kmn:A (2.14) BS01 6UK 2.7.10.1 GO:0004672 ... P04629 28039433
    368780 5kmo:A (2.67) BS01 6UM 2.7.10.1 GO:0004672 ... P04629 28039433 BindingDB: IC50=4000nM
    368781 5kmp:A (3.2) BS01 FAD ? GO:0000166 ... F5L3B8 28067272
    368782 5kmp:B (3.2) BS01 FAD ? GO:0000166 ... F5L3B8 28067272
    368783 5kmq:A (2.7) BS01 FAD ? GO:0000166 ... F5L3B8 28067272
    368784 5kmq:B (2.7) BS01 FAD ? GO:0000166 ... F5L3B8 28067272
    368785 5kmq:C (2.7) BS01 FAD ? GO:0000166 ... F5L3B8 28067272
    368786 5kmq:D (2.7) BS01 FAD ? GO:0000166 ... F5L3B8 28067272
    368787 5kmr:A (3.0) BS01 FAD ? GO:0000166 ... F5L3B8 28067272
    368788 5kmr:A (3.0) BS02 NAD ? GO:0000166 ... F5L3B8 28067272
    368789 5kmr:B (3.0) BS01 FAD ? GO:0000166 ... F5L3B8 28067272
    368790 5kmr:C (3.0) BS01 FAD ? GO:0000166 ... F5L3B8 28067272
    368791 5kmr:C (3.0) BS02 NAD ? GO:0000166 ... F5L3B8 28067272
    368792 5kmr:D (3.0) BS01 FAD ? GO:0000166 ... F5L3B8 28067272
    368793 5kmr:D (3.0) BS02 NAD ? GO:0000166 ... F5L3B8 28067272
    368794 5kms:A (2.5) BS01 FAD ? GO:0000166 ... F5L3B8 28067272
    368795 5kms:A (2.5) BS02 NAD ? GO:0000166 ... F5L3B8 28067272
    368796 5kms:B (2.5) BS01 FAD ? GO:0000166 ... F5L3B8 28067272
    368797 5kms:C (2.5) BS01 FAD ? GO:0000166 ... F5L3B8 28067272
    368798 5kms:D (2.5) BS01 FAD ? GO:0000166 ... F5L3B8 28067272
    368799 5kmw:A (1.1) BS01 PNM 3.5.2.6 GO:0008800 ... Q47066 N/A
    368800 5kmw:A (1.1) BS02 PNN 3.5.2.6 GO:0008800 ... Q47066 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).