SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    368801 5kmw:A (1.1) BS03 PNN 3.5.2.6 GO:0008800 ... Q47066 N/A
    368802 5kmx:A (2.452) BS01 peptide ? N/A G0UXP9 27671214
    368803 5kn0:A (2.729) BS01 CA ? GO:0005509 ... Q05JF3 27649144
    368804 5kn0:A (2.729) BS02 CA ? GO:0005509 ... Q05JF3 27649144
    368805 5kn0:A (2.729) BS03 CA ? GO:0005509 ... Q05JF3 27649144
    368806 5kn0:A (2.729) BS04 CA ? GO:0005509 ... Q05JF3 27649144
    368807 5kn0:B (2.729) BS01 CA ? GO:0005509 ... Q05JF3 27649144
    368808 5kn0:B (2.729) BS02 CA ? GO:0005509 ... Q05JF3 27649144
    368809 5kn0:B (2.729) BS03 CA ? GO:0005509 ... Q05JF3 27649144
    368810 5kn0:C (2.729) BS01 CA ? GO:0005509 ... Q05JF3 27649144
    368811 5kn0:C (2.729) BS02 CA ? GO:0005509 ... Q05JF3 27649144
    368812 5kn0:C (2.729) BS03 CA ? GO:0005509 ... Q05JF3 27649144
    368813 5kn0:D (2.729) BS01 CA ? GO:0005509 ... Q05JF3 27649144
    368814 5kn0:D (2.729) BS02 CA ? GO:0005509 ... Q05JF3 27649144
    368815 5kn0:D (2.729) BS03 CA ? GO:0005509 ... Q05JF3 27649144
    368816 5kn0:D (2.729) BS04 CA ? GO:0005509 ... Q05JF3 27649144
    368817 5kn1:A (2.137) BS01 CA ? GO:0005509 ... Q05JF3 27649144
    368818 5kn1:A (2.137) BS02 CA ? GO:0005509 ... Q05JF3 27649144
    368819 5kn1:A (2.137) BS03 CA ? GO:0005509 ... Q05JF3 27649144
    368820 5kn1:A (2.137) BS04 CA ? GO:0005509 ... Q05JF3 27649144
    368821 5kn1:A (2.137) BS05 CA ? GO:0005509 ... Q05JF3 27649144
    368822 5kn1:B (2.137) BS01 CA ? GO:0005509 ... Q05JF3 27649144
    368823 5kn1:B (2.137) BS02 CA ? GO:0005509 ... Q05JF3 27649144
    368824 5kn1:B (2.137) BS03 CA ? GO:0005509 ... Q05JF3 27649144
    368825 5kn1:B (2.137) BS04 CA ? GO:0005509 ... Q05JF3 27649144
    368826 5kn1:B (2.137) BS05 CA ? GO:0005509 ... Q05JF3 27649144
    368827 5kn1:B (2.137) BS06 CA ? GO:0005509 ... Q05JF3 27649144
    368828 5kn1:B (2.137) BS07 CA ? GO:0005509 ... Q05JF3 27649144
    368829 5kn1:B (2.137) BS08 CA ? GO:0005509 ... Q05JF3 27649144
    368830 5kn1:B (2.137) BS09 CA ? GO:0005509 ... Q05JF3 27649144
    368831 5kn1:B (2.137) BS10 CA ? GO:0005509 ... Q05JF3 27649144
    368832 5kn1:C (2.137) BS01 CA ? GO:0005509 ... Q05JF3 27649144
    368833 5kn1:C (2.137) BS02 CA ? GO:0005509 ... Q05JF3 27649144
    368834 5kn1:C (2.137) BS03 CA ? GO:0005509 ... Q05JF3 27649144
    368835 5kn1:C (2.137) BS04 CA ? GO:0005509 ... Q05JF3 27649144
    368836 5kn1:C (2.137) BS05 CA ? GO:0005509 ... Q05JF3 27649144
    368837 5kn1:C (2.137) BS06 CA ? GO:0005509 ... Q05JF3 27649144
    368838 5kn1:C (2.137) BS07 CA ? GO:0005509 ... Q05JF3 27649144
    368839 5kn1:C (2.137) BS08 CA ? GO:0005509 ... Q05JF3 27649144
    368840 5kn1:C (2.137) BS09 CA ? GO:0005509 ... Q05JF3 27649144
    368841 5kn2:A (2.601) BS01 CA ? GO:0005509 ... Q05JF3 27649144
    368842 5kn2:A (2.601) BS02 CA ? GO:0005509 ... Q05JF3 27649144
    368843 5kn2:A (2.601) BS03 CA ? GO:0005509 ... Q05JF3 27649144
    368844 5kn2:A (2.601) BS04 CA ? GO:0005509 ... Q05JF3 27649144
    368845 5kn2:A (2.601) BS05 CA ? GO:0005509 ... Q05JF3 27649144
    368846 5kn2:B (2.601) BS01 CA ? GO:0005509 ... Q05JF3 27649144
    368847 5kn2:B (2.601) BS02 CA ? GO:0005509 ... Q05JF3 27649144
    368848 5kn2:B (2.601) BS03 CA ? GO:0005509 ... Q05JF3 27649144
    368849 5kn2:B (2.601) BS04 CA ? GO:0005509 ... Q05JF3 27649144
    368850 5kn2:B (2.601) BS05 CA ? GO:0005509 ... Q05JF3 27649144
    368851 5kn2:B (2.601) BS06 CA ? GO:0005509 ... Q05JF3 27649144
    368852 5kn2:B (2.601) BS07 CA ? GO:0005509 ... Q05JF3 27649144
    368853 5kn2:B (2.601) BS08 CA ? GO:0005509 ... Q05JF3 27649144
    368854 5kn2:C (2.601) BS01 CA ? GO:0005509 ... Q05JF3 27649144
    368855 5kn2:C (2.601) BS02 CA ? GO:0005509 ... Q05JF3 27649144
    368856 5kn2:C (2.601) BS03 CA ? GO:0005509 ... Q05JF3 27649144
    368857 5kn2:C (2.601) BS04 CA ? GO:0005509 ... Q05JF3 27649144
    368858 5kn2:C (2.601) BS05 CA ? GO:0005509 ... Q05JF3 27649144
    368859 5kn2:C (2.601) BS06 CA ? GO:0005509 ... Q05JF3 27649144
    368860 5kn2:C (2.601) BS07 CA ? GO:0005509 ... Q05JF3 27649144
    368861 5kn2:C (2.601) BS08 CA ? GO:0005509 ... Q05JF3 27649144
    368862 5kn2:C (2.601) BS09 CA ? GO:0005509 ... Q05JF3 27649144
    368863 5kn2:C (2.601) BS10 CA ? GO:0005509 ... Q05JF3 27649144
    368864 5kn3:A (1.849) BS01 CA ? GO:0005509 ... Q05JF3 27649144
    368865 5kn3:A (1.849) BS02 CA ? GO:0005509 ... Q05JF3 27649144
    368866 5kn3:A (1.849) BS03 CA ? GO:0005509 ... Q05JF3 27649144
    368867 5kn5:C (2.8) BS01 ZN ? N/A P01135 27543934
    368868 5kn5:F (2.8) BS01 ZN ? N/A P01135 27543934
    368869 5kn8:A (1.81) BS01 dna 3.2.2.31 GO:0003677 ... P83847 28130451
    368870 5kn8:A (1.81) BS02 dna 3.2.2.31 GO:0003677 ... P83847 28130451
    368871 5kn8:A (1.81) BS03 SF4 3.2.2.31 GO:0003677 ... P83847 28130451
    368872 5kn8:A (1.81) BS04 CA 3.2.2.31 GO:0003677 ... P83847 28130451
    368873 5kn9:A (1.93) BS01 dna 3.2.2.31 GO:0003677 ... P83847 28130451
    368874 5kn9:A (1.93) BS02 dna 3.2.2.31 GO:0003677 ... P83847 28130451
    368875 5kn9:A (1.93) BS03 SF4 3.2.2.31 GO:0003677 ... P83847 28130451
    368876 5kn9:A (1.93) BS04 CA 3.2.2.31 GO:0003677 ... P83847 28130451
    368877 5knb:B (3.251) BS01 MG 7.2.2.1 GO:0005515 ... Q08636 27807367
    368878 5knb:B (3.251) BS02 ADP 7.2.2.1 GO:0005515 ... Q08636 27807367
    368879 5knb:C (3.251) BS01 ADP 7.2.2.1 GO:0005515 ... Q08636 27807367
    368880 5knc:A (3.015) BS01 ADP 7.2.2.1 GO:0005515 ... Q08636 27807367
    368881 5knc:B (3.015) BS01 ADP 7.2.2.1 GO:0005515 ... Q08636 27807367
    368882 5knc:C (3.015) BS01 ADP 7.2.2.1 GO:0005515 ... Q08636 27807367
    368883 5knc:F (3.015) BS01 ADP ? GO:0005515 ... Q08637 27807367
    368884 5kne:A (5.64) BS01 ANP ? GO:0005515 ... P31539 27478928
    368885 5kne:B (5.64) BS01 ANP ? GO:0005515 ... P31539 27478928
    368886 5kne:B (5.64) BS02 ANP ? GO:0005515 ... P31539 27478928
    368887 5kne:C (5.64) BS01 ANP ? GO:0005515 ... P31539 27478928
    368888 5kne:C (5.64) BS02 ANP ? GO:0005515 ... P31539 27478928
    368889 5kne:D (5.64) BS01 ANP ? GO:0005515 ... P31539 27478928
    368890 5kne:D (5.64) BS02 ANP ? GO:0005515 ... P31539 27478928
    368891 5kne:E (5.64) BS01 ANP ? GO:0005515 ... P31539 27478928
    368892 5kne:E (5.64) BS02 ANP ? GO:0005515 ... P31539 27478928
    368893 5kne:F (5.64) BS01 ANP ? GO:0005515 ... P31539 27478928
    368894 5kne:F (5.64) BS02 ANP ? GO:0005515 ... P31539 27478928
    368895 5knj:A (2.88) BS01 6UX ? GO:0004672 ... Q8NB16 27832137 BindingDB: Kd=9300nM
    368896 5knj:B (2.88) BS01 6UX ? GO:0004672 ... Q8NB16 27832137 BindingDB: Kd=9300nM
    368897 5knk:B (1.9) BS01 11A N/A GO:0016020 ... N/A 27681620
    368898 5knm:A (3.3) BS01 peptide ? N/A P30511 28636952
    368899 5knn:A (2.68) BS01 A5A 6.1.1.7 GO:0000166 ... P49588 27622773
    368900 5knn:B (2.68) BS01 A5A 6.1.1.7 GO:0000166 ... P49588 27622773
    368901 5knn:C (2.68) BS01 A5A 6.1.1.7 GO:0000166 ... P49588 27622773
    368902 5knn:D (2.68) BS01 A5A 6.1.1.7 GO:0000166 ... P49588 27622773
    368903 5knn:E (2.68) BS01 A5A 6.1.1.7 GO:0000166 ... P49588 27622773
    368904 5knn:F (2.68) BS01 A5A 6.1.1.7 GO:0000166 ... P49588 27622773
    368905 5knn:G (2.68) BS01 A5A 6.1.1.7 GO:0000166 ... P49588 27622773
    368906 5knn:H (2.68) BS01 A5A 6.1.1.7 GO:0000166 ... P49588 27622773
    368907 5knp:A (2.45) BS01 6W7 2.4.2.8 GO:0000166 ... P9WHQ9 N/A
    368908 5knp:A (2.45) BS02 MG 2.4.2.8 GO:0000166 ... P9WHQ9 N/A
    368909 5knp:A (2.45) BS03 POP 2.4.2.8 GO:0000166 ... P9WHQ9 N/A
    368910 5knp:B (2.45) BS01 6W7 2.4.2.8 GO:0000166 ... P9WHQ9 N/A
    368911 5knp:B (2.45) BS02 MG 2.4.2.8 GO:0000166 ... P9WHQ9 N/A
    368912 5knp:B (2.45) BS03 POP 2.4.2.8 GO:0000166 ... P9WHQ9 N/A
    368913 5knp:C (2.45) BS01 6W7 2.4.2.8 GO:0000166 ... P9WHQ9 N/A
    368914 5knp:C (2.45) BS02 MG 2.4.2.8 GO:0000166 ... P9WHQ9 N/A
    368915 5knp:C (2.45) BS03 POP 2.4.2.8 GO:0000166 ... P9WHQ9 N/A
    368916 5knp:D (2.45) BS01 6W7 2.4.2.8 GO:0000166 ... P9WHQ9 N/A
    368917 5knp:D (2.45) BS02 MG 2.4.2.8 GO:0000166 ... P9WHQ9 N/A
    368918 5knp:D (2.45) BS03 POP 2.4.2.8 GO:0000166 ... P9WHQ9 N/A
    368919 5knq:A (2.553) BS01 6W8 2.4.2.8 GO:0000166 ... P9WHQ9 N/A BindingDB: Ki=8000nM
    368920 5knq:A (2.553) BS02 MG 2.4.2.8 GO:0000166 ... P9WHQ9 N/A
    368921 5knq:A (2.553) BS03 POP 2.4.2.8 GO:0000166 ... P9WHQ9 N/A
    368922 5knq:B (2.553) BS01 6W8 2.4.2.8 GO:0000166 ... P9WHQ9 N/A BindingDB: Ki=8000nM
    368923 5knq:B (2.553) BS02 MG 2.4.2.8 GO:0000166 ... P9WHQ9 N/A
    368924 5knq:B (2.553) BS03 POP 2.4.2.8 GO:0000166 ... P9WHQ9 N/A
    368925 5knq:C (2.553) BS01 6W8 2.4.2.8 GO:0000166 ... P9WHQ9 N/A BindingDB: Ki=8000nM
    368926 5knq:C (2.553) BS02 MG 2.4.2.8 GO:0000166 ... P9WHQ9 N/A
    368927 5knq:C (2.553) BS03 POP 2.4.2.8 GO:0000166 ... P9WHQ9 N/A
    368928 5knq:D (2.553) BS01 6W8 2.4.2.8 GO:0000166 ... P9WHQ9 N/A BindingDB: Ki=8000nM
    368929 5knq:D (2.553) BS02 MG 2.4.2.8 GO:0000166 ... P9WHQ9 N/A
    368930 5knq:D (2.553) BS03 POP 2.4.2.8 GO:0000166 ... P9WHQ9 N/A
    368931 5knr:A (2.864) BS01 3L5 2.4.2.8 GO:0000166 ... P0A9M2 N/A
    368932 5knr:A (2.864) BS02 MG 2.4.2.8 GO:0000166 ... P0A9M2 N/A
    368933 5knr:B (2.864) BS01 3L5 2.4.2.8 GO:0000166 ... P0A9M2 N/A
    368934 5kns:A (2.792) BS01 3L7 2.4.2.8 GO:0000166 ... P0A9M2 N/A
    368935 5kns:A (2.792) BS02 MG 2.4.2.8 GO:0000166 ... P0A9M2 N/A
    368936 5kns:B (2.792) BS01 3L7 2.4.2.8 GO:0000166 ... P0A9M2 N/A
    368937 5kns:B (2.792) BS02 MG 2.4.2.8 GO:0000166 ... P0A9M2 N/A
    368938 5knt:A (2.55) BS01 6WB 2.4.2.8 GO:0000166 ... P0A9M2 N/A
    368939 5knt:B (2.55) BS01 6WB 2.4.2.8 GO:0000166 ... P0A9M2 N/A
    368940 5knu:A (2.808) BS01 6WA 2.4.2.8 GO:0000166 ... P0A9M2 N/A
    368941 5knu:A (2.808) BS02 MG 2.4.2.8 GO:0000166 ... P0A9M2 N/A
    368942 5knu:B (2.808) BS01 6WA 2.4.2.8 GO:0000166 ... P0A9M2 N/A
    368943 5knu:B (2.808) BS02 MG 2.4.2.8 GO:0000166 ... P0A9M2 N/A
    368944 5knv:A (2.861) BS01 6W9 2.4.2.8 GO:0000166 ... P0A9M2 N/A
    368945 5knv:A (2.861) BS02 MG 2.4.2.8 GO:0000166 ... P0A9M2 N/A
    368946 5knv:B (2.861) BS01 6W9 2.4.2.8 GO:0000166 ... P0A9M2 N/A
    368947 5knv:B (2.861) BS02 MG 2.4.2.8 GO:0000166 ... P0A9M2 N/A
    368948 5knx:A (2.4) BS01 6WC 2.4.2.8 GO:0000166 ... P0A9M2 N/A
    368949 5knx:A (2.4) BS02 MG 2.4.2.8 GO:0000166 ... P0A9M2 N/A
    368950 5knx:B (2.4) BS01 6WC 2.4.2.8 GO:0000166 ... P0A9M2 N/A
    368951 5kny:A (2.91) BS01 YPG 2.4.2.8 GO:0000166 ... P9WHQ9 N/A BindingDB: Ki=60nM
    368952 5kny:B (2.91) BS01 YPG 2.4.2.8 GO:0000166 ... P9WHQ9 N/A BindingDB: Ki=60nM
    368953 5kny:C (2.91) BS01 YPG 2.4.2.8 GO:0000166 ... P9WHQ9 N/A BindingDB: Ki=60nM
    368954 5kny:D (2.91) BS01 YPG 2.4.2.8 GO:0000166 ... P9WHQ9 N/A BindingDB: Ki=60nM
    368955 5ko1:A (2.16) BS01 6UY ? GO:0004672 ... Q8NB16 27832137 MOAD: Kd=230nM
    BindingDB: Kd=230nM
    368956 5ko3:A (1.949) BS01 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0006508 ... K9N7C7 28079137
    368957 5ko5:A (1.36) BS01 CYT 2.4.2.1 GO:0003824 ... A0A0U3AGT1 30192840
    368958 5ko6:A (1.42) BS01 CYT 2.4.2.1 GO:0003824 ... A0A0U3AGT1 30192840
    368959 5ko6:A (1.42) BS02 R1P 2.4.2.1 GO:0003824 ... A0A0U3AGT1 30192840
    368960 5ko7:A (2.248) BS01 FMN 1.21.1.1 GO:0000166 ... F4KU78 28157283
    368961 5ko7:A (2.248) BS02 FMN 1.21.1.1 GO:0000166 ... F4KU78 28157283
    368962 5ko7:B (2.248) BS01 FMN 1.21.1.1 GO:0000166 ... F4KU78 28157283
    368963 5ko7:B (2.248) BS02 FMN 1.21.1.1 GO:0000166 ... F4KU78 28157283
    368964 5ko8:A (2.15) BS01 FMN 1.21.1.1 GO:0000166 ... F4KU78 28157283
    368965 5ko8:A (2.15) BS02 IYR 1.21.1.1 GO:0000166 ... F4KU78 28157283 MOAD: Kd=8.2uM
    368966 5ko8:B (2.15) BS01 FMN 1.21.1.1 GO:0000166 ... F4KU78 28157283
    368967 5ko8:B (2.15) BS02 IYR 1.21.1.1 GO:0000166 ... F4KU78 28157283 MOAD: Kd=8.2uM
    368968 5koa:B (2.67) BS01 peptide ? GO:0000917 ... B7MAM4 N/A
    368969 5kob:A (1.6) BS01 FE2 3.5.1.88 GO:0006412 ... Q13XB1 N/A
    368970 5kob:B (1.6) BS01 FE2 3.5.1.88 GO:0006412 ... Q13XB1 N/A
    368971 5kob:C (1.6) BS01 FE2 3.5.1.88 GO:0006412 ... Q13XB1 N/A
    368972 5kob:D (1.6) BS01 FE2 3.5.1.88 GO:0006412 ... Q13XB1 N/A
    368973 5koc:A (2.293) BS01 SAM 2.1.1.300 GO:0005737 ... C3SBW0 27573242
    368974 5koc:B (2.293) BS01 SAM 2.1.1.300 GO:0005737 ... C3SBW0 27573242
    368975 5kod:A (2.202) BS01 AMP 6.3.2.- GO:0009733 ... O81829 27849615
    368976 5kod:A (2.202) BS02 IAC 6.3.2.- GO:0009733 ... O81829 27849615
    368977 5kod:B (2.202) BS01 AMP 6.3.2.- GO:0009733 ... O81829 27849615
    368978 5kod:B (2.202) BS02 IAC 6.3.2.- GO:0009733 ... O81829 27849615
    368979 5kod:C (2.202) BS01 AMP 6.3.2.- GO:0009733 ... O81829 27849615
    368980 5kod:C (2.202) BS02 IAC 6.3.2.- GO:0009733 ... O81829 27849615
    368981 5kod:D (2.202) BS01 AMP 6.3.2.- GO:0009733 ... O81829 27849615
    368982 5kod:D (2.202) BS02 IAC 6.3.2.- GO:0009733 ... O81829 27849615
    368983 5koe:A (1.79) BS01 XYS 2.4.1.- GO:0008107 ... Q9SWH5 28670741
    368984 5koe:A (1.79) BS02 GAL 2.4.1.- GO:0008107 ... Q9SWH5 28670741
    368985 5kof:A (2.4) BS01 6W5 2.3.1.41 GO:0004315 ... P0A953 31209348
    368986 5kof:B (2.4) BS01 6W5 2.3.1.41 GO:0004315 ... P0A953 31209348
    368987 5koh:A (1.83) BS01 ICS 1.18.6.1 GO:0005524 ... A9H5W5 27487256
    368988 5koh:A (1.83) BS02 CLF 1.18.6.1 GO:0005524 ... A9H5W5 27487256
    368989 5koh:B (1.83) BS01 CLF 1.18.6.1 GO:0005524 ... A9H5W8 27487256
    368990 5koh:B (1.83) BS02 FE 1.18.6.1 GO:0005524 ... A9H5W8 27487256
    368991 5koh:B (1.83) BS03 FE 1.18.6.1 GO:0005524 ... A9H5W8 27487256
    368992 5koh:C (1.83) BS01 ICS 1.18.6.1 GO:0005524 ... A9H5W5 27487256
    368993 5koh:C (1.83) BS02 CLF 1.18.6.1 GO:0005524 ... A9H5W5 27487256
    368994 5koh:D (1.83) BS01 FE 1.18.6.1 GO:0005524 ... A9H5W8 27487256
    368995 5koh:D (1.83) BS02 FE 1.18.6.1 GO:0005524 ... A9H5W8 27487256
    368996 5koh:D (1.83) BS03 CLF 1.18.6.1 GO:0005524 ... A9H5W8 27487256
    368997 5koi:A (1.7) BS01 NAD 1.3.1.9 GO:0000166 ... Q57A95 N/A
    368998 5koi:B (1.7) BS01 NAD 1.3.1.9 GO:0000166 ... Q57A95 N/A
    368999 5koi:C (1.7) BS01 NAD 1.3.1.9 GO:0000166 ... Q57A95 N/A
    369000 5koi:D (1.7) BS01 NAD 1.3.1.9 GO:0000166 ... Q57A95 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).