SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    369001 5koi:E (1.7) BS01 NAD 1.3.1.9 GO:0000166 ... Q57A95 N/A
    369002 5koi:F (1.7) BS01 NAD 1.3.1.9 GO:0000166 ... Q57A95 N/A
    369003 5koi:G (1.7) BS01 NAD 1.3.1.9 GO:0000166 ... Q57A95 N/A
    369004 5koi:H (1.7) BS01 NAD 1.3.1.9 GO:0000166 ... Q57A95 N/A
    369005 5koj:A (2.592) BS01 ICS 1.18.6.1 GO:0005524 ... A9H5W5 27487256
    369006 5koj:A (2.592) BS02 CLF 1.18.6.1 GO:0005524 ... A9H5W5 27487256
    369007 5koj:B (2.592) BS01 CLF 1.18.6.1 GO:0005524 ... A9H5W8 27487256
    369008 5koj:B (2.592) BS02 FE 1.18.6.1 GO:0005524 ... A9H5W8 27487256
    369009 5koj:B (2.592) BS03 FE 1.18.6.1 GO:0005524 ... A9H5W8 27487256
    369010 5koj:C (2.592) BS01 ICS 1.18.6.1 GO:0005524 ... A9H5W5 27487256
    369011 5koj:C (2.592) BS02 CLF 1.18.6.1 GO:0005524 ... A9H5W5 27487256
    369012 5koj:D (2.592) BS01 FE 1.18.6.1 GO:0005524 ... A9H5W8 27487256
    369013 5koj:D (2.592) BS02 CLF 1.18.6.1 GO:0005524 ... A9H5W8 27487256
    369014 5koj:D (2.592) BS03 FE 1.18.6.1 GO:0005524 ... A9H5W8 27487256
    369015 5kok:A (1.792) BS01 SAH 2.1.1.300 GO:0005737 ... C3SBW0 27573242
    369016 5kok:A (1.792) BS02 S9T 2.1.1.300 GO:0005737 ... C3SBW0 27573242
    369017 5kok:A (1.792) BS03 R9T 2.1.1.300 GO:0005737 ... C3SBW0 27573242
    369018 5kok:B (1.792) BS01 SAH 2.1.1.300 GO:0005737 ... C3SBW0 27573242
    369019 5kok:B (1.792) BS02 S9T 2.1.1.300 GO:0005737 ... C3SBW0 27573242
    369020 5kok:B (1.792) BS03 R9T 2.1.1.300 GO:0005737 ... C3SBW0 27573242
    369021 5kom:A (2.69) BS01 DMU ? GO:0005886 ... Q6J5N4 27449280
    369022 5kom:B (2.69) BS01 DMU ? GO:0005886 ... Q6J5N4 27449280
    369023 5koq:A (2.7) BS01 6VR 3.4.23.15 GO:0004190 ... P00797 27687967 BindingDB: IC50=0.580000nM
    369024 5koq:B (2.7) BS01 6VR 3.4.23.15 GO:0004190 ... P00797 27687967 BindingDB: IC50=0.580000nM
    369025 5kor:A (2.2) BS01 GDP 2.4.1.- GO:0008107 ... Q9SWH5 27637560
    369026 5kor:B (2.2) BS01 BGC 2.4.1.- GO:0008107 ... Q9SWH5 27637560
    369027 5kor:B (2.2) BS02 XYS 2.4.1.- GO:0008107 ... Q9SWH5 27637560
    369028 5kor:B (2.2) BS03 GAL 2.4.1.- GO:0008107 ... Q9SWH5 27637560
    369029 5kor:B (2.2) BS04 GDP 2.4.1.- GO:0008107 ... Q9SWH5 27637560
    369030 5kor:C (2.2) BS01 XYS 2.4.1.- GO:0008107 ... Q9SWH5 27637560
    369031 5kor:C (2.2) BS02 GAL 2.4.1.- GO:0008107 ... Q9SWH5 27637560
    369032 5kor:C (2.2) BS03 GDP 2.4.1.- GO:0008107 ... Q9SWH5 27637560
    369033 5kor:D (2.2) BS01 GDP 2.4.1.- GO:0008107 ... Q9SWH5 27637560
    369034 5kos:A (2.41) BS01 6VS 3.4.23.15 GO:0004190 ... P00797 27774132 MOAD: ic50=1.5nM
    BindingDB: IC50=0.790000nM
    369035 5kos:B (2.41) BS01 6VS 3.4.23.15 GO:0004190 ... P00797 27774132 MOAD: ic50=1.5nM
    BindingDB: IC50=0.790000nM
    369036 5kot:A (2.1) BS01 6VU 3.4.23.15 GO:0004190 ... P00797 N/A BindingDB: IC50=0.840000nM
    369037 5kot:B (2.1) BS01 6VU 3.4.23.15 GO:0004190 ... P00797 N/A BindingDB: IC50=0.840000nM
    369038 5kow:A (2.1) BS01 FAD 1.14.13.211 GO:0000166 ... Q5YTV5 27557658
    369039 5kox:A (1.8) BS01 FAD 1.14.13.211 GO:0000166 ... Q5YTV5 27557658
    369040 5kox:A (1.8) BS02 RFP 1.14.13.211 GO:0000166 ... Q5YTV5 27557658 MOAD: Kd=13uM
    369041 5koy:A (3.85) BS01 ATP 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 27864369
    369042 5koy:B (3.85) BS01 ATP 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 27864369
    369043 5koz:A (2.3) BS01 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369044 5koz:A (2.3) BS02 MG 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369045 5koz:A (2.3) BS03 CO3 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369046 5koz:A (2.3) BS04 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369047 5koz:B (2.3) BS01 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369048 5koz:B (2.3) BS02 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369049 5koz:B (2.3) BS03 MG 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369050 5koz:B (2.3) BS04 CO3 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369051 5koz:C (2.3) BS01 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369052 5koz:C (2.3) BS02 MG 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369053 5koz:C (2.3) BS03 CO3 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369054 5koz:C (2.3) BS04 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369055 5koz:D (2.3) BS01 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369056 5koz:D (2.3) BS02 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369057 5koz:D (2.3) BS03 MG 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369058 5koz:D (2.3) BS04 CO3 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369059 5koz:E (2.3) BS01 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369060 5koz:E (2.3) BS02 MG 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369061 5koz:E (2.3) BS03 CO3 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369062 5koz:E (2.3) BS04 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369063 5koz:F (2.3) BS01 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369064 5koz:F (2.3) BS02 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369065 5koz:F (2.3) BS03 MG 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369066 5koz:F (2.3) BS04 CO3 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369067 5koz:G (2.3) BS01 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369068 5koz:G (2.3) BS02 MG 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369069 5koz:G (2.3) BS03 CO3 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369070 5koz:G (2.3) BS04 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369071 5koz:H (2.3) BS01 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369072 5koz:H (2.3) BS02 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369073 5koz:H (2.3) BS03 MG 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369074 5koz:H (2.3) BS04 CO3 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369075 5koz:I (2.3) BS01 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369076 5koz:I (2.3) BS02 MG 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369077 5koz:I (2.3) BS03 CO3 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369078 5koz:I (2.3) BS04 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369079 5koz:J (2.3) BS01 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369080 5koz:J (2.3) BS02 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369081 5koz:J (2.3) BS03 MG 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369082 5koz:J (2.3) BS04 CO3 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369083 5koz:K (2.3) BS01 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369084 5koz:K (2.3) BS02 MG 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369085 5koz:K (2.3) BS03 CO3 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369086 5koz:K (2.3) BS04 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369087 5koz:L (2.3) BS01 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369088 5koz:L (2.3) BS02 CAP 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369089 5koz:L (2.3) BS03 MG 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369090 5koz:L (2.3) BS04 CO3 4.1.1.39 GO:0000287 ... Q6N0W9 N/A
    369091 5kp1:A (1.218) BS01 EQU 5.3.3.1 GO:0004769 ... P07445 27545569
    369092 5kp1:B (1.218) BS01 EQU 5.3.3.1 GO:0004769 ... P07445 27545569
    369093 5kp1:C (1.218) BS01 EQU 5.3.3.1 GO:0004769 ... P07445 27545569
    369094 5kp1:D (1.218) BS01 EQU 5.3.3.1 GO:0004769 ... P07445 27545569
    369095 5kp2:B (2.0) BS01 COA 2.3.1.180 GO:0004315 ... Q9KLJ3 N/A
    369096 5kp2:B (2.0) BS02 OCA 2.3.1.180 GO:0004315 ... Q9KLJ3 N/A
    369097 5kp3:A (1.7) BS01 EQU 5.3.3.1 GO:0004769 ... P07445 27545569
    369098 5kp3:B (1.7) BS01 EQU 5.3.3.1 GO:0004769 ... P07445 27545569
    369099 5kp4:B (1.706) BS01 6VW 5.3.3.1 GO:0004769 ... P07445 27545569
    369100 5kp7:A (1.6) BS01 PNS 2.3.3.10 GO:0004421 ... F4Y432 27573844
    369101 5kp8:A (1.9) BS01 PNS 2.3.3.10 GO:0004421 ... F4Y432 27573844
    369102 5kp8:A (1.9) BS02 6VG 2.3.3.10 GO:0004421 ... F4Y432 27573844
    369103 5kp8:B (1.9) BS01 6VG ? N/A Q6DNF1 27573844
    369104 5kpc:A (2.5) BS01 SAM 2.1.1.300 GO:0005737 ... C3SBW0 27573242
    369105 5kpc:B (2.5) BS01 SAM 2.1.1.300 GO:0005737 ... C3SBW0 27573242
    369106 5kpf:A (1.698) BS01 HEC ? GO:0005515 ... P00044 29125201
    369107 5kpf:B (1.698) BS01 HEC ? GO:0005515 ... P00044 29125201
    369108 5kpf:B (1.698) BS02 6VJ ? GO:0005515 ... P00044 29125201
    369109 5kpg:A (1.6) BS01 SAH 2.1.1.300 GO:0005737 ... C3SBW0 27573242
    369110 5kpg:B (1.6) BS01 SAH 2.1.1.300 GO:0005737 ... C3SBW0 27573242
    369111 5kpk:A (2.4) BS01 6VK 2.7.11.1
    2.7.11.26
    GO:0001837 ... P49841 29515000 MOAD: ic50=0.005uM
    BindingDB: IC50=5nM
    369112 5kpk:B (2.4) BS01 6VK 2.7.11.1
    2.7.11.26
    GO:0001837 ... P49841 29515000 MOAD: ic50=0.005uM
    BindingDB: IC50=5nM
    369113 5kpl:A (2.6) BS01 6VL 2.7.11.1
    2.7.11.26
    GO:0001837 ... P49841 29515000 BindingDB: IC50=515nM
    369114 5kpl:B (2.6) BS01 6VL 2.7.11.1
    2.7.11.26
    GO:0001837 ... P49841 29515000 BindingDB: IC50=515nM
    369115 5kpm:A (2.69) BS01 6VM 2.7.11.1
    2.7.11.26
    GO:0001837 ... P49841 29515000
    369116 5kpm:B (2.69) BS01 6VM 2.7.11.1
    2.7.11.26
    GO:0001837 ... P49841 29515000
    369117 5kpn:A (2.3) BS01 6WX 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 N/A
    369118 5kpn:B (2.3) BS01 6WX 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 N/A
    369119 5kpo:A (2.65) BS01 6WY 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 N/A
    369120 5kpo:B (2.65) BS01 6WY 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 N/A
    369121 5kpp:A (2.33) BS01 6WZ 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 N/A
    369122 5kpp:B (2.33) BS01 6WZ 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 N/A
    369123 5kpq:A (2.55) BS01 6X2 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 N/A
    369124 5kpq:B (2.55) BS01 6X2 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 N/A
    369125 5kpr:A (1.827) BS01 ANP 2.7.1.33 GO:0004594 ... Q9H999 27555321
    369126 5kpr:A (1.827) BS02 PAU 2.7.1.33 GO:0004594 ... Q9H999 27555321
    369127 5kps:1 (3.9) BS01 rna ? GO:0002181 ... P0A7M9 27434674
    369128 5kps:10 (3.9) BS01 rna ? GO:0000028 ... P0A7W1 27434674
    369129 5kps:11 (3.9) BS01 rna ? GO:0002181 ... P02358 27434674
    369130 5kps:12 (3.9) BS01 rna ? GO:0000028 ... P02359 27434674
    369131 5kps:12 (3.9) BS02 rna ? GO:0000028 ... P02359 27434674
    369132 5kps:13 (3.9) BS01 rna ? GO:0000028 ... P0A7W7 27434674
    369133 5kps:14 (3.9) BS01 rna ? GO:0000049 ... P0A7X3 27434674
    369134 5kps:15 (3.9) BS01 rna ? GO:0000049 ... P0A7R5 27434674
    369135 5kps:16 (3.9) BS01 rna ? GO:0002181 ... P0A7R9 27434674
    369136 5kps:17 (3.9) BS01 rna ? GO:0000049 ... P0A7S3 27434674
    369137 5kps:18 (3.9) BS01 rna ? GO:0000049 ... P0A7S9 27434674
    369138 5kps:18 (3.9) BS02 rna ? GO:0000049 ... P0A7S9 27434674
    369139 5kps:19 (3.9) BS01 rna ? GO:0000028 ... P0AG59 27434674
    369140 5kps:2 (3.9) BS01 rna ? GO:0000027 ... P0A7N4 27434674
    369141 5kps:20 (3.9) BS01 rna ? GO:0000028 ... P0ADZ4 27434674
    369142 5kps:20 (3.9) BS02 rna ? GO:0000028 ... P0ADZ4 27434674
    369143 5kps:21 (3.9) BS01 rna ? GO:0000028 ... P0A7T3 27434674
    369144 5kps:22 (3.9) BS01 rna ? GO:0000028 ... P0AG63 27434674
    369145 5kps:23 (3.9) BS01 rna ? GO:0002181 ... P0A7T7 27434674
    369146 5kps:24 (3.9) BS01 rna ? GO:0000028 ... P0A7U3 27434674
    369147 5kps:25 (3.9) BS01 rna ? GO:0000028 ... P0A7U7 27434674
    369148 5kps:26 (3.9) BS01 rna ? GO:0000028 ... P68679 27434674
    369149 5kps:26 (3.9) BS02 rna ? GO:0000028 ... P68679 27434674
    369150 5kps:3 (3.9) BS01 rna ? GO:0000027 ... P0A7N9 27434674
    369151 5kps:4 (3.9) BS01 rna ? GO:0002181 ... P0A7P5 27434674
    369152 5kps:5 (3.9) BS01 rna ? GO:0002181 ... P0A7Q1 27434674
    369153 5kps:6 (3.9) BS01 rna ? GO:0002181 ... P0A7Q6 27434674
    369154 5kps:7 (3.9) BS01 rna ? GO:0000028 ... P0A7V0 27434674
    369155 5kps:8 (3.9) BS01 rna ? GO:0000028 ... P0A7V3 27434674
    369156 5kps:9 (3.9) BS01 rna ? GO:0000028 ... P0A7V8 27434674
    369157 5kps:A (3.9) BS01 rna 2.7.6.5 GO:0005515 ... P0AG20 27434674
    369158 5kps:B (3.9) BS01 rna ? GO:0000027 ... P60422 27434674
    369159 5kps:C (3.9) BS01 rna ? GO:0000027 ... P60438 27434674
    369160 5kps:D (3.9) BS01 rna ? GO:0001070 ... P60723 27434674
    369161 5kps:E (3.9) BS01 rna ? GO:0000027 ... P62399 27434674
    369162 5kps:E (3.9) BS02 rna ? GO:0000027 ... P62399 27434674
    369163 5kps:E (3.9) BS03 rna ? GO:0000027 ... P62399 27434674
    369164 5kps:F (3.9) BS01 rna ? GO:0000027 ... P0AG55 27434674
    369165 5kps:G (3.9) BS01 rna ? GO:0002181 ... P0A7R1 27434674
    369166 5kps:H (3.9) BS01 rna ? GO:0002181 ... P0A7J3 27434674
    369167 5kps:I (3.9) BS01 rna ? GO:0000027 ... P0A7J7 27434674
    369168 5kps:J (3.9) BS01 rna ? GO:0002181 ... P0AA10 27434674
    369169 5kps:K (3.9) BS01 rna ? GO:0002181 ... P0ADY3 27434674
    369170 5kps:K (3.9) BS02 rna ? GO:0002181 ... P0ADY3 27434674
    369171 5kps:L (3.9) BS01 rna ? GO:0002181 ... P02413 27434674
    369172 5kps:M (3.9) BS01 rna ? GO:0000027 ... P0ADY7 27434674
    369173 5kps:M (3.9) BS02 rna ? GO:0000027 ... P0ADY7 27434674
    369174 5kps:N (3.9) BS01 rna ? GO:0000027 ... P0AG44 27434674
    369175 5kps:O (3.9) BS01 rna ? GO:0002181 ... P0C018 27434674
    369176 5kps:O (3.9) BS02 rna ? GO:0002181 ... P0C018 27434674
    369177 5kps:P (3.9) BS01 rna ? GO:0000027 ... P0A7K6 27434674
    369178 5kps:P (3.9) BS02 rna ? GO:0000027 ... P0A7K6 27434674
    369179 5kps:Q (3.9) BS01 rna ? GO:0000027 ... P0A7L3 27434674
    369180 5kps:R (3.9) BS01 rna ? GO:0002181 ... P0AG48 27434674
    369181 5kps:S (3.9) BS01 rna ? GO:0002181 ... P61175 27434674
    369182 5kps:T (3.9) BS01 rna ? GO:0000027 ... P0ADZ0 27434674
    369183 5kps:U (3.9) BS01 rna ? GO:0000027 ... P60624 27434674
    369184 5kps:V (3.9) BS01 rna ? GO:0000027 ... P68919 27434674
    369185 5kps:W (3.9) BS01 rna ? GO:0000027 ... P0A7L8 27434674
    369186 5kps:W (3.9) BS02 rna ? GO:0000027 ... P0A7L8 27434674
    369187 5kps:X (3.9) BS01 rna ? GO:0000027 ... P0A7M2 27434674
    369188 5kps:Y (3.9) BS01 rna ? GO:0000027 ... P0A7M6 27434674
    369189 5kps:Z (3.9) BS01 rna ? GO:0000027 ... P0AG51 27434674
    369190 5kps:Z (3.9) BS02 rna ? GO:0000027 ... P0AG51 27434674
    369191 5kpt:A (2.301) BS01 ANP 2.7.1.33 GO:0004594 ... Q9H999 27555321
    369192 5kpv:1 (4.1) BS01 rna ? GO:0000027 ... P0A7N4 27434674
    369193 5kpv:10 (4.1) BS01 rna ? GO:0002181 ... P02358 27434674
    369194 5kpv:11 (4.1) BS01 rna ? GO:0000028 ... P02359 27434674
    369195 5kpv:11 (4.1) BS02 rna ? GO:0000028 ... P02359 27434674
    369196 5kpv:11 (4.1) BS03 rna ? GO:0000028 ... P02359 27434674
    369197 5kpv:12 (4.1) BS01 rna ? GO:0000028 ... P0A7W7 27434674
    369198 5kpv:13 (4.1) BS01 rna ? GO:0000049 ... P0A7X3 27434674
    369199 5kpv:13 (4.1) BS02 rna ? GO:0000049 ... P0A7X3 27434674
    369200 5kpv:14 (4.1) BS01 rna ? GO:0000049 ... P0A7R5 27434674

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).