SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    369201 5kpv:15 (4.1) BS01 rna ? GO:0002181 ... P0A7R9 27434674
    369202 5kpv:16 (4.1) BS01 rna ? GO:0000049 ... P0A7S3 27434674
    369203 5kpv:17 (4.1) BS01 rna ? GO:0000049 ... P0A7S9 27434674
    369204 5kpv:17 (4.1) BS02 rna ? GO:0000049 ... P0A7S9 27434674
    369205 5kpv:18 (4.1) BS01 rna ? GO:0000028 ... P0AG59 27434674
    369206 5kpv:19 (4.1) BS01 rna ? GO:0000028 ... P0ADZ4 27434674
    369207 5kpv:19 (4.1) BS02 rna ? GO:0000028 ... P0ADZ4 27434674
    369208 5kpv:2 (4.1) BS01 rna ? GO:0000027 ... P0A7N9 27434674
    369209 5kpv:20 (4.1) BS01 rna ? GO:0000028 ... P0A7T3 27434674
    369210 5kpv:21 (4.1) BS01 rna ? GO:0000028 ... P0AG63 27434674
    369211 5kpv:22 (4.1) BS01 rna ? GO:0002181 ... P0A7T7 27434674
    369212 5kpv:23 (4.1) BS01 rna ? GO:0000028 ... P0A7U3 27434674
    369213 5kpv:24 (4.1) BS01 rna ? GO:0000028 ... P0A7U7 27434674
    369214 5kpv:25 (4.1) BS01 rna ? GO:0000028 ... P68679 27434674
    369215 5kpv:25 (4.1) BS02 rna ? GO:0000028 ... P68679 27434674
    369216 5kpv:3 (4.1) BS01 rna ? GO:0002181 ... P0A7P5 27434674
    369217 5kpv:33 (4.1) BS01 rna 2.7.6.5 GO:0005515 ... P0AG20 27434674
    369218 5kpv:33 (4.1) BS02 rna 2.7.6.5 GO:0005515 ... P0AG20 27434674
    369219 5kpv:33 (4.1) BS03 rna 2.7.6.5 GO:0005515 ... P0AG20 27434674
    369220 5kpv:4 (4.1) BS01 rna ? GO:0002181 ... P0A7Q1 27434674
    369221 5kpv:5 (4.1) BS01 rna ? GO:0002181 ... P0A7Q6 27434674
    369222 5kpv:6 (4.1) BS01 rna ? GO:0000028 ... P0A7V0 27434674
    369223 5kpv:7 (4.1) BS01 rna ? GO:0000028 ... P0A7V3 27434674
    369224 5kpv:8 (4.1) BS01 rna ? GO:0000028 ... P0A7V8 27434674
    369225 5kpv:9 (4.1) BS01 rna ? GO:0000028 ... P0A7W1 27434674
    369226 5kpv:9 (4.1) BS02 rna ? GO:0000028 ... P0A7W1 27434674
    369227 5kpv:A (4.1) BS01 rna ? GO:0000027 ... P60422 27434674
    369228 5kpv:B (4.1) BS01 rna ? GO:0000027 ... P60438 27434674
    369229 5kpv:C (4.1) BS01 rna ? GO:0001070 ... P60723 27434674
    369230 5kpv:D (4.1) BS01 rna ? GO:0000027 ... P62399 27434674
    369231 5kpv:D (4.1) BS02 rna ? GO:0000027 ... P62399 27434674
    369232 5kpv:D (4.1) BS03 rna ? GO:0000027 ... P62399 27434674
    369233 5kpv:E (4.1) BS01 rna ? GO:0000027 ... P0AG55 27434674
    369234 5kpv:F (4.1) BS01 rna ? GO:0002181 ... P0A7R1 27434674
    369235 5kpv:G (4.1) BS01 rna ? GO:0002181 ... P0A7J3 27434674
    369236 5kpv:H (4.1) BS01 rna ? GO:0000027 ... P0A7J7 27434674
    369237 5kpv:I (4.1) BS01 rna ? GO:0002181 ... P0AA10 27434674
    369238 5kpv:J (4.1) BS01 rna ? GO:0002181 ... P0ADY3 27434674
    369239 5kpv:J (4.1) BS02 rna ? GO:0002181 ... P0ADY3 27434674
    369240 5kpv:K (4.1) BS01 rna ? GO:0002181 ... P02413 27434674
    369241 5kpv:L (4.1) BS01 rna ? GO:0000027 ... P0ADY7 27434674
    369242 5kpv:L (4.1) BS02 rna ? GO:0000027 ... P0ADY7 27434674
    369243 5kpv:M (4.1) BS01 rna ? GO:0000027 ... P0AG44 27434674
    369244 5kpv:N (4.1) BS01 rna ? GO:0002181 ... P0C018 27434674
    369245 5kpv:N (4.1) BS02 rna ? GO:0002181 ... P0C018 27434674
    369246 5kpv:O (4.1) BS01 rna ? GO:0000027 ... P0A7K6 27434674
    369247 5kpv:O (4.1) BS02 rna ? GO:0000027 ... P0A7K6 27434674
    369248 5kpv:P (4.1) BS01 rna ? GO:0000027 ... P0A7L3 27434674
    369249 5kpv:Q (4.1) BS01 rna ? GO:0002181 ... P0AG48 27434674
    369250 5kpv:R (4.1) BS01 rna ? GO:0002181 ... P61175 27434674
    369251 5kpv:S (4.1) BS01 rna ? GO:0000027 ... P0ADZ0 27434674
    369252 5kpv:T (4.1) BS01 rna ? GO:0000027 ... P60624 27434674
    369253 5kpv:U (4.1) BS01 rna ? GO:0000027 ... P68919 27434674
    369254 5kpv:U (4.1) BS02 rna ? GO:0000027 ... P68919 27434674
    369255 5kpv:V (4.1) BS01 rna ? GO:0000027 ... P0A7L8 27434674
    369256 5kpv:V (4.1) BS02 rna ? GO:0000027 ... P0A7L8 27434674
    369257 5kpv:W (4.1) BS01 rna ? GO:0000027 ... P0A7M2 27434674
    369258 5kpv:X (4.1) BS01 rna ? GO:0000027 ... P0A7M6 27434674
    369259 5kpv:Y (4.1) BS01 rna ? GO:0000027 ... P0AG51 27434674
    369260 5kpv:Y (4.1) BS02 rna ? GO:0000027 ... P0AG51 27434674
    369261 5kpv:Z (4.1) BS01 rna ? GO:0002181 ... P0A7M9 27434674
    369262 5kpw:1 (3.9) BS01 rna ? GO:0000027 ... P0A7N4 27434674
    369263 5kpw:10 (3.9) BS01 rna ? GO:0002181 ... P02358 27434674
    369264 5kpw:11 (3.9) BS01 rna ? GO:0000028 ... P02359 27434674
    369265 5kpw:11 (3.9) BS02 rna ? GO:0000028 ... P02359 27434674
    369266 5kpw:11 (3.9) BS03 rna ? GO:0000028 ... P02359 27434674
    369267 5kpw:12 (3.9) BS01 rna ? GO:0000028 ... P0A7W7 27434674
    369268 5kpw:13 (3.9) BS01 rna ? GO:0000049 ... P0A7X3 27434674
    369269 5kpw:14 (3.9) BS01 rna ? GO:0000049 ... P0A7R5 27434674
    369270 5kpw:15 (3.9) BS01 rna ? GO:0002181 ... P0A7R9 27434674
    369271 5kpw:16 (3.9) BS01 rna ? GO:0000049 ... P0A7S3 27434674
    369272 5kpw:17 (3.9) BS01 rna ? GO:0000049 ... P0A7S9 27434674
    369273 5kpw:17 (3.9) BS02 rna ? GO:0000049 ... P0A7S9 27434674
    369274 5kpw:18 (3.9) BS01 rna ? GO:0000028 ... P0AG59 27434674
    369275 5kpw:19 (3.9) BS01 rna ? GO:0000028 ... P0ADZ4 27434674
    369276 5kpw:19 (3.9) BS02 rna ? GO:0000028 ... P0ADZ4 27434674
    369277 5kpw:2 (3.9) BS01 rna ? GO:0000027 ... P0A7N9 27434674
    369278 5kpw:20 (3.9) BS01 rna ? GO:0000028 ... P0A7T3 27434674
    369279 5kpw:21 (3.9) BS01 rna ? GO:0000028 ... P0AG63 27434674
    369280 5kpw:22 (3.9) BS01 rna ? GO:0002181 ... P0A7T7 27434674
    369281 5kpw:23 (3.9) BS01 rna ? GO:0000028 ... P0A7U3 27434674
    369282 5kpw:24 (3.9) BS01 rna ? GO:0000028 ... P0A7U7 27434674
    369283 5kpw:25 (3.9) BS01 rna ? GO:0000028 ... P68679 27434674
    369284 5kpw:25 (3.9) BS02 rna ? GO:0000028 ... P68679 27434674
    369285 5kpw:3 (3.9) BS01 rna ? GO:0002181 ... P0A7P5 27434674
    369286 5kpw:33 (3.9) BS01 rna 2.7.6.5 GO:0005515 ... P0AG20 27434674
    369287 5kpw:33 (3.9) BS02 rna 2.7.6.5 GO:0005515 ... P0AG20 27434674
    369288 5kpw:33 (3.9) BS03 rna 2.7.6.5 GO:0005515 ... P0AG20 27434674
    369289 5kpw:4 (3.9) BS01 rna ? GO:0002181 ... P0A7Q1 27434674
    369290 5kpw:5 (3.9) BS01 rna ? GO:0002181 ... P0A7Q6 27434674
    369291 5kpw:6 (3.9) BS01 rna ? GO:0000028 ... P0A7V0 27434674
    369292 5kpw:7 (3.9) BS01 rna ? GO:0000028 ... P0A7V3 27434674
    369293 5kpw:8 (3.9) BS01 rna ? GO:0000028 ... P0A7V8 27434674
    369294 5kpw:9 (3.9) BS01 rna ? GO:0000028 ... P0A7W1 27434674
    369295 5kpw:A (3.9) BS01 rna ? GO:0000027 ... P60422 27434674
    369296 5kpw:A (3.9) BS02 rna ? GO:0000027 ... P60422 27434674
    369297 5kpw:B (3.9) BS01 rna ? GO:0000027 ... P60438 27434674
    369298 5kpw:C (3.9) BS01 rna ? GO:0001070 ... P60723 27434674
    369299 5kpw:D (3.9) BS01 rna ? GO:0000027 ... P62399 27434674
    369300 5kpw:D (3.9) BS02 rna ? GO:0000027 ... P62399 27434674
    369301 5kpw:D (3.9) BS03 rna ? GO:0000027 ... P62399 27434674
    369302 5kpw:E (3.9) BS01 rna ? GO:0000027 ... P0AG55 27434674
    369303 5kpw:F (3.9) BS01 rna ? GO:0002181 ... P0A7R1 27434674
    369304 5kpw:G (3.9) BS01 rna ? GO:0002181 ... P0A7J3 27434674
    369305 5kpw:H (3.9) BS01 rna ? GO:0000027 ... P0A7J7 27434674
    369306 5kpw:I (3.9) BS01 rna ? GO:0002181 ... P0AA10 27434674
    369307 5kpw:J (3.9) BS01 rna ? GO:0002181 ... P0ADY3 27434674
    369308 5kpw:J (3.9) BS02 rna ? GO:0002181 ... P0ADY3 27434674
    369309 5kpw:K (3.9) BS01 rna ? GO:0002181 ... P02413 27434674
    369310 5kpw:L (3.9) BS01 rna ? GO:0000027 ... P0ADY7 27434674
    369311 5kpw:L (3.9) BS02 rna ? GO:0000027 ... P0ADY7 27434674
    369312 5kpw:M (3.9) BS01 rna ? GO:0000027 ... P0AG44 27434674
    369313 5kpw:N (3.9) BS01 rna ? GO:0002181 ... P0C018 27434674
    369314 5kpw:N (3.9) BS02 rna ? GO:0002181 ... P0C018 27434674
    369315 5kpw:O (3.9) BS01 rna ? GO:0000027 ... P0A7K6 27434674
    369316 5kpw:O (3.9) BS02 rna ? GO:0000027 ... P0A7K6 27434674
    369317 5kpw:P (3.9) BS01 rna ? GO:0000027 ... P0A7L3 27434674
    369318 5kpw:Q (3.9) BS01 rna ? GO:0002181 ... P0AG48 27434674
    369319 5kpw:R (3.9) BS01 rna ? GO:0002181 ... P61175 27434674
    369320 5kpw:S (3.9) BS01 rna ? GO:0000027 ... P0ADZ0 27434674
    369321 5kpw:T (3.9) BS01 rna ? GO:0000027 ... P60624 27434674
    369322 5kpw:U (3.9) BS01 rna ? GO:0000027 ... P68919 27434674
    369323 5kpw:V (3.9) BS01 rna ? GO:0000027 ... P0A7L8 27434674
    369324 5kpw:V (3.9) BS02 rna ? GO:0000027 ... P0A7L8 27434674
    369325 5kpw:W (3.9) BS01 rna ? GO:0000027 ... P0A7M2 27434674
    369326 5kpw:X (3.9) BS01 rna ? GO:0000027 ... P0A7M6 27434674
    369327 5kpw:Y (3.9) BS01 rna ? GO:0000027 ... P0AG51 27434674
    369328 5kpw:Y (3.9) BS02 rna ? GO:0000027 ... P0AG51 27434674
    369329 5kpw:Z (3.9) BS01 rna ? GO:0002181 ... P0A7M9 27434674
    369330 5kpx:1 (3.9) BS01 rna ? GO:0000027 ... P0A7N4 27434674
    369331 5kpx:10 (3.9) BS01 rna ? GO:0002181 ... P02358 27434674
    369332 5kpx:11 (3.9) BS01 rna ? GO:0000028 ... P02359 27434674
    369333 5kpx:11 (3.9) BS02 rna ? GO:0000028 ... P02359 27434674
    369334 5kpx:12 (3.9) BS01 rna ? GO:0000028 ... P0A7W7 27434674
    369335 5kpx:13 (3.9) BS01 rna ? GO:0000049 ... P0A7X3 27434674
    369336 5kpx:13 (3.9) BS02 rna ? GO:0000049 ... P0A7X3 27434674
    369337 5kpx:14 (3.9) BS01 rna ? GO:0000049 ... P0A7R5 27434674
    369338 5kpx:15 (3.9) BS01 rna ? GO:0002181 ... P0A7R9 27434674
    369339 5kpx:16 (3.9) BS01 rna ? GO:0000049 ... P0A7S3 27434674
    369340 5kpx:17 (3.9) BS01 rna ? GO:0000049 ... P0A7S9 27434674
    369341 5kpx:17 (3.9) BS02 rna ? GO:0000049 ... P0A7S9 27434674
    369342 5kpx:18 (3.9) BS01 rna ? GO:0000028 ... P0AG59 27434674
    369343 5kpx:19 (3.9) BS01 rna ? GO:0000028 ... P0ADZ4 27434674
    369344 5kpx:19 (3.9) BS02 rna ? GO:0000028 ... P0ADZ4 27434674
    369345 5kpx:2 (3.9) BS01 rna ? GO:0000027 ... P0A7N9 27434674
    369346 5kpx:20 (3.9) BS01 rna ? GO:0000028 ... P0A7T3 27434674
    369347 5kpx:21 (3.9) BS01 rna ? GO:0000028 ... P0AG63 27434674
    369348 5kpx:22 (3.9) BS01 rna ? GO:0002181 ... P0A7T7 27434674
    369349 5kpx:23 (3.9) BS01 rna ? GO:0000028 ... P0A7U3 27434674
    369350 5kpx:24 (3.9) BS01 rna ? GO:0000028 ... P0A7U7 27434674
    369351 5kpx:25 (3.9) BS01 rna ? GO:0000028 ... P68679 27434674
    369352 5kpx:25 (3.9) BS02 rna ? GO:0000028 ... P68679 27434674
    369353 5kpx:3 (3.9) BS01 rna ? GO:0002181 ... P0A7P5 27434674
    369354 5kpx:33 (3.9) BS01 rna 2.7.6.5 GO:0005515 ... P0AG20 27434674
    369355 5kpx:33 (3.9) BS02 rna 2.7.6.5 GO:0005515 ... P0AG20 27434674
    369356 5kpx:33 (3.9) BS03 rna 2.7.6.5 GO:0005515 ... P0AG20 27434674
    369357 5kpx:4 (3.9) BS01 rna ? GO:0002181 ... P0A7Q1 27434674
    369358 5kpx:5 (3.9) BS01 rna ? GO:0002181 ... P0A7Q6 27434674
    369359 5kpx:6 (3.9) BS01 rna ? GO:0000028 ... P0A7V0 27434674
    369360 5kpx:7 (3.9) BS01 rna ? GO:0000028 ... P0A7V3 27434674
    369361 5kpx:8 (3.9) BS01 rna ? GO:0000028 ... P0A7V8 27434674
    369362 5kpx:9 (3.9) BS01 rna ? GO:0000028 ... P0A7W1 27434674
    369363 5kpx:A (3.9) BS01 rna ? GO:0000027 ... P60422 27434674
    369364 5kpx:B (3.9) BS01 rna ? GO:0000027 ... P60438 27434674
    369365 5kpx:C (3.9) BS01 rna ? GO:0001070 ... P60723 27434674
    369366 5kpx:D (3.9) BS01 rna ? GO:0000027 ... P62399 27434674
    369367 5kpx:D (3.9) BS02 rna ? GO:0000027 ... P62399 27434674
    369368 5kpx:D (3.9) BS03 rna ? GO:0000027 ... P62399 27434674
    369369 5kpx:E (3.9) BS01 rna ? GO:0000027 ... P0AG55 27434674
    369370 5kpx:F (3.9) BS01 rna ? GO:0002181 ... P0A7R1 27434674
    369371 5kpx:G (3.9) BS01 rna ? GO:0002181 ... P0A7J3 27434674
    369372 5kpx:H (3.9) BS01 rna ? GO:0000027 ... P0A7J7 27434674
    369373 5kpx:I (3.9) BS01 rna ? GO:0002181 ... P0AA10 27434674
    369374 5kpx:J (3.9) BS01 rna ? GO:0002181 ... P0ADY3 27434674
    369375 5kpx:J (3.9) BS02 rna ? GO:0002181 ... P0ADY3 27434674
    369376 5kpx:K (3.9) BS01 rna ? GO:0002181 ... P02413 27434674
    369377 5kpx:L (3.9) BS01 rna ? GO:0000027 ... P0ADY7 27434674
    369378 5kpx:L (3.9) BS02 rna ? GO:0000027 ... P0ADY7 27434674
    369379 5kpx:M (3.9) BS01 rna ? GO:0000027 ... P0AG44 27434674
    369380 5kpx:N (3.9) BS01 rna ? GO:0002181 ... P0C018 27434674
    369381 5kpx:N (3.9) BS02 rna ? GO:0002181 ... P0C018 27434674
    369382 5kpx:O (3.9) BS01 rna ? GO:0000027 ... P0A7K6 27434674
    369383 5kpx:O (3.9) BS02 rna ? GO:0000027 ... P0A7K6 27434674
    369384 5kpx:P (3.9) BS01 rna ? GO:0000027 ... P0A7L3 27434674
    369385 5kpx:Q (3.9) BS01 rna ? GO:0002181 ... P0AG48 27434674
    369386 5kpx:R (3.9) BS01 rna ? GO:0002181 ... P61175 27434674
    369387 5kpx:S (3.9) BS01 rna ? GO:0000027 ... P0ADZ0 27434674
    369388 5kpx:T (3.9) BS01 rna ? GO:0000027 ... P60624 27434674
    369389 5kpx:U (3.9) BS01 rna ? GO:0000027 ... P68919 27434674
    369390 5kpx:U (3.9) BS02 rna ? GO:0000027 ... P68919 27434674
    369391 5kpx:V (3.9) BS01 rna ? GO:0000027 ... P0A7L8 27434674
    369392 5kpx:V (3.9) BS02 rna ? GO:0000027 ... P0A7L8 27434674
    369393 5kpx:W (3.9) BS01 rna ? GO:0000027 ... P0A7M2 27434674
    369394 5kpx:X (3.9) BS01 rna ? GO:0000027 ... P0A7M6 27434674
    369395 5kpx:Y (3.9) BS01 rna ? GO:0000027 ... P0AG51 27434674
    369396 5kpx:Y (3.9) BS02 rna ? GO:0000027 ... P0AG51 27434674
    369397 5kpx:Z (3.9) BS01 rna ? GO:0002181 ... P0A7M9 27434674
    369398 5kpz:A (2.4) BS01 PAZ 2.7.1.33 GO:0004594 ... Q9H999 27555321
    369399 5kpz:A (2.4) BS02 ADP 2.7.1.33 GO:0004594 ... Q9H999 27555321
    369400 5kq0:A (1.8) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 28409923

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).