SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    369401 5kq0:A (1.8) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 28409923
    369402 5kq0:B (1.8) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 28409923
    369403 5kq0:B (1.8) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 28409923
    369404 5kq1:A (3.002) BS01 peptide ? GO:0000184 ... Q9P805 27694842
    369405 5kq1:A (3.002) BS02 peptide ? GO:0000184 ... Q9P805 27694842
    369406 5kq1:D (3.002) BS01 peptide ? GO:0000184 ... Q9P805 27694842
    369407 5kq1:D (3.002) BS02 peptide ? GO:0000184 ... Q9P805 27694842
    369408 5kq2:A (1.9) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 28409923
    369409 5kq2:A (1.9) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 28409923
    369410 5kq2:B (1.9) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 28409923
    369411 5kq2:B (1.9) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 28409923
    369412 5kq3:A (1.85) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 28409923
    369413 5kq3:A (1.85) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 28409923
    369414 5kq3:B (1.85) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 28409923
    369415 5kq3:B (1.85) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 28409923
    369416 5kq4:A (2.56) BS01 peptide ? GO:0000184 ... Q9P805 27694842
    369417 5kq4:A (2.56) BS02 peptide ? GO:0000184 ... Q9P805 27694842
    369418 5kq4:B (2.56) BS01 6VQ 3.-.-.- GO:0000184 ... O13828 27694842
    369419 5kq4:D (2.56) BS01 peptide ? GO:0000184 ... Q9P805 27694842
    369420 5kq4:D (2.56) BS02 peptide ? GO:0000184 ... Q9P805 27694842
    369421 5kq4:E (2.56) BS01 6VQ 3.-.-.- GO:0000184 ... O13828 27694842
    369422 5kq5:A (3.41) BS01 STU 2.7.11.1
    2.7.11.26
    2.7.11.31
    GO:0004672 ... P54645 27490827
    369423 5kq5:A (3.41) BS02 6VT 2.7.11.1
    2.7.11.26
    2.7.11.31
    GO:0004672 ... P54645 27490827
    369424 5kq5:B (3.41) BS01 6VT ? N/A P80386 27490827
    369425 5kq5:C (3.41) BS01 AMP ? GO:0004679 ... P80385 27490827
    369426 5kq5:C (3.41) BS02 AMP ? GO:0004679 ... P80385 27490827
    369427 5kq5:C (3.41) BS03 ADP ? GO:0004679 ... P80385 27490827
    369428 5kq6:A (1.62) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 28409923
    369429 5kq6:A (1.62) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 28409923
    369430 5kq6:B (1.62) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 28409923
    369431 5kq6:B (1.62) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 28409923
    369432 5kq8:A (2.002) BS01 AN2 2.7.1.33 GO:0004594 ... Q9H999 27555321
    369433 5kqa:A (2.05) BS01 GSH ? GO:0005737 ... A0A1W6I4R7 28478310
    369434 5kqb:A (-1.00) BS01 ZN 3.4.24.75 N/A Q2G1F1 28729697
    369435 5kqc:A (-1.00) BS01 ZN 3.4.24.75 N/A Q2G1F1 28729697
    369436 5kqd:A (2.6) BS01 PKZ 2.7.1.33 GO:0004594 ... Q9H999 27555321
    369437 5kqf:A (1.98) BS01 6WD 3.4.23.46 GO:0004190 ... P56817 27559936 MOAD: ic50=0.31uM
    BindingDB: IC50=310nM
    369438 5kqg:A (1.5) BS01 6VX 3.1.3.2
    3.1.3.48
    GO:0003993 ... P24666 27676368 MOAD: Ki=3.2uM
    369439 5kqh:A (1.82) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 28409923
    369440 5kqh:A (1.82) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 28409923
    369441 5kqh:B (1.82) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 28409923
    369442 5kqh:B (1.82) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 28409923
    369443 5kqi:A (1.87) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 28409923
    369444 5kqi:A (1.87) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 28409923
    369445 5kqi:B (1.87) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 28409923
    369446 5kqi:B (1.87) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 28409923
    369447 5kqk:A (1.75) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 28409923
    369448 5kqk:A (1.75) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 28409923
    369449 5kqk:B (1.75) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 28409923
    369450 5kqk:B (1.75) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 28409923
    369451 5kql:A (1.45) BS01 6VY 3.1.3.2
    3.1.3.48
    GO:0003993 ... P24666 27676368
    369452 5kqn:A (1.75) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 N/A
    369453 5kqn:A (1.75) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 N/A
    369454 5kqn:B (1.75) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 N/A
    369455 5kqn:B (1.75) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 N/A
    369456 5kqo:A (2.35) BS01 PO4 1.1.1.267 GO:0008299 ... Q8DBF5 30278288
    369457 5kqo:A (2.35) BS02 PO4 1.1.1.267 GO:0008299 ... Q8DBF5 30278288
    369458 5kqo:B (2.35) BS01 PO4 1.1.1.267 GO:0008299 ... Q8DBF5 30278288
    369459 5kqq:A (1.87) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 N/A
    369460 5kqq:A (1.87) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 N/A
    369461 5kqq:B (1.87) BS01 HEM 1.11.1.21 GO:0004096 ... Q3JNW6 N/A
    369462 5kqq:B (1.87) BS02 OXY 1.11.1.21 GO:0004096 ... Q3JNW6 N/A
    369463 5kqr:A (1.331) BS01 SAM 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004482 ... A0A024B7W1 27633330
    369464 5kqr:A (1.331) BS02 PO4 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004482 ... A0A024B7W1 27633330
    369465 5kqs:A (1.5) BS01 M7G 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004482 ... A0A024B7W1 27633330
    369466 5kqs:A (1.5) BS02 SAM 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004482 ... A0A024B7W1 27633330
    369467 5kqt:A (1.99) BS01 PLP N/A GO:0008483 ... N/A N/A
    369468 5kqu:A (2.62) BS01 PLP N/A GO:0008483 ... N/A N/A
    369469 5kqu:A (2.62) BS02 PLP N/A GO:0008483 ... N/A N/A
    369470 5kqu:B (2.62) BS01 PLP N/A GO:0008483 ... N/A N/A
    369471 5kqu:B (2.62) BS02 PLP N/A GO:0008483 ... N/A N/A
    369472 5kqu:C (2.62) BS01 PLP N/A GO:0008483 ... N/A N/A
    369473 5kqu:C (2.62) BS02 PLP N/A GO:0008483 ... N/A N/A
    369474 5kqu:D (2.62) BS01 PLP N/A GO:0008483 ... N/A N/A
    369475 5kqu:D (2.62) BS02 PLP N/A GO:0008483 ... N/A N/A
    369476 5kqu:E (2.62) BS01 PLP N/A GO:0008483 ... N/A N/A
    369477 5kqu:E (2.62) BS02 PLP N/A GO:0008483 ... N/A N/A
    369478 5kqu:F (2.62) BS01 PLP N/A GO:0008483 ... N/A N/A
    369479 5kqu:F (2.62) BS02 PLP N/A GO:0008483 ... N/A N/A
    369480 5kqv:E (4.4) BS01 peptide 2.7.10.1 N/A P06213 23302862
    369481 5kqv:F (4.4) BS01 peptide 2.7.10.1 N/A P06213 23302862
    369482 5kqv:F (4.4) BS02 FUC 2.7.10.1 N/A P06213 23302862
    369483 5kqx:A (2.4) BS01 ROC ? GO:0004190 ... C8BD48 27576689 MOAD: Ki=3.6nM
    369484 5kqx:B (2.4) BS01 ROC ? GO:0004190 ... C8BD48 27576689
    369485 5kqy:A (1.65) BS01 017 ? GO:0004190 ... C8BD48 27576689
    369486 5kqy:B (1.65) BS01 017 ? GO:0004190 ... C8BD48 27576689 MOAD: Ki=0.51nM
    369487 5kqz:A (1.7) BS01 0Q4 ? GO:0004190 ... C8BD48 27576689
    369488 5kqz:B (1.7) BS01 0Q4 ? GO:0004190 ... C8BD48 27576689
    369489 5kr0:A (1.8) BS01 478 ? GO:0004190 ... C8BD48 27576689 MOAD: Ki=0.71nM
    369490 5kr0:B (1.8) BS01 478 ? GO:0004190 ... C8BD48 27576689
    369491 5kr1:A (1.6) BS01 017 ? GO:0004190 ... V5YAB1 27576689
    369492 5kr1:B (1.6) BS01 017 ? GO:0004190 ... V5YAB1 27576689 MOAD: Ki=0.32nM
    369493 5kr2:A (1.78) BS01 ROC ? GO:0004190 ... V5YAB1 27576689 MOAD: Ki=3.3nM
    369494 5kr2:B (1.78) BS01 ROC ? GO:0004190 ... V5YAB1 27576689
    369495 5kr2:C (1.78) BS01 ROC ? GO:0004190 ... V5YAB1 27576689 MOAD: Ki=3.3nM
    369496 5kr2:D (1.78) BS01 ROC ? GO:0004190 ... V5YAB1 27576689
    369497 5kr3:A (1.95) BS01 PLP N/A GO:0008483 ... N/A N/A
    369498 5kr3:B (1.95) BS01 PLP N/A GO:0008483 ... N/A N/A
    369499 5kr4:A (2.0) BS01 PLP N/A GO:0008483 ... N/A N/A
    369500 5kr4:A (2.0) BS02 PLP N/A GO:0008483 ... N/A N/A
    369501 5kr4:B (2.0) BS01 PLP N/A GO:0008483 ... N/A N/A
    369502 5kr5:A (2.1) BS01 PLP N/A GO:0008483 ... N/A N/A
    369503 5kr5:A (2.1) BS02 CA N/A GO:0008483 ... N/A N/A
    369504 5kr5:A (2.1) BS03 CA N/A GO:0008483 ... N/A N/A
    369505 5kr5:A (2.1) BS04 PLP N/A GO:0008483 ... N/A N/A
    369506 5kr5:B (2.1) BS01 PLP N/A GO:0008483 ... N/A N/A
    369507 5kr5:B (2.1) BS02 PLP N/A GO:0008483 ... N/A N/A
    369508 5kr5:B (2.1) BS03 CA N/A GO:0008483 ... N/A N/A
    369509 5kr6:A (1.99) BS01 PLP N/A GO:0008483 ... N/A N/A
    369510 5kr6:B (1.99) BS01 PLP N/A GO:0008483 ... N/A N/A
    369511 5kr7:A (1.9) BS01 FE2 1.14.11.66 N/A Q9H3R0 27476424
    369512 5kr7:A (1.9) BS02 ZN 1.14.11.66 N/A Q9H3R0 27476424
    369513 5kr7:A (1.9) BS03 6X9 1.14.11.66 N/A Q9H3R0 27476424 MOAD: ic50=2.88uM
    369514 5kr7:B (1.9) BS01 FE2 1.14.11.66 N/A Q9H3R0 27476424
    369515 5kr7:B (1.9) BS02 ZN 1.14.11.66 N/A Q9H3R0 27476424
    369516 5kr7:B (1.9) BS03 6X9 1.14.11.66 N/A Q9H3R0 27476424 MOAD: ic50=2.88uM
    369517 5kr8:A (2.118) BS01 6WE 3.4.23.46 GO:0004190 ... P56817 27559936 MOAD: ic50=150nM
    BindingDB: IC50=150nM
    369518 5kr9:A (2.25) BS01 peptide ? N/A P03372 28042045
    369519 5kr9:A (2.25) BS02 CUE ? N/A P03372 28042045 BindingDB: IC50=75.7nM
    369520 5kr9:B (2.25) BS01 peptide ? N/A P03372 28042045
    369521 5kr9:B (2.25) BS02 CUE ? N/A P03372 28042045 BindingDB: IC50=75.7nM
    369522 5kra:A (2.401) BS01 peptide ? N/A P03372 28042045
    369523 5kra:A (2.401) BS02 6WS ? N/A P03372 28042045
    369524 5kra:B (2.401) BS01 peptide ? N/A P03372 28042045
    369525 5kra:B (2.401) BS02 6WT ? N/A P03372 28042045
    369526 5kra:E (2.401) BS01 peptide ? N/A P03372 28042045
    369527 5kra:E (2.401) BS02 6WS ? N/A P03372 28042045
    369528 5kra:F (2.401) BS01 peptide ? N/A P03372 28042045
    369529 5kra:F (2.401) BS02 6WT ? N/A P03372 28042045
    369530 5krb:B (2.101) BS01 dna ? GO:0003700 ... Q64249 27984042
    369531 5krb:B (2.101) BS02 dna ? GO:0003700 ... Q64249 27984042
    369532 5krb:B (2.101) BS03 ZN ? GO:0003700 ... Q64249 27984042
    369533 5krb:B (2.101) BS04 ZN ? GO:0003700 ... Q64249 27984042
    369534 5krb:G (2.101) BS01 dna ? GO:0003700 ... Q64249 27984042
    369535 5krb:G (2.101) BS02 dna ? GO:0003700 ... Q64249 27984042
    369536 5krb:G (2.101) BS03 ZN ? GO:0003700 ... Q64249 27984042
    369537 5krb:G (2.101) BS04 ZN ? GO:0003700 ... Q64249 27984042
    369538 5krc:A (2.4) BS01 peptide ? N/A P03372 28042045
    369539 5krc:A (2.4) BS02 ZER ? N/A P03372 28042045
    369540 5krc:B (2.4) BS01 peptide ? N/A P03372 28042045
    369541 5krc:B (2.4) BS02 ZER ? N/A P03372 28042045
    369542 5krd:A (2.103) BS01 FMN 1.21.1.1 GO:0000166 ... F4KU78 28157283
    369543 5krd:B (2.103) BS01 FMN 1.21.1.1 GO:0000166 ... F4KU78 28157283
    369544 5kre:A (2.0) BS01 6WG 3.1.2.22 GO:0004622 ... Q5VWZ2 27391855
    369545 5krf:A (2.193) BS01 peptide ? N/A P03372 28042045
    369546 5krf:A (2.193) BS02 6WL ? N/A P03372 28042045
    369547 5krf:B (2.193) BS01 peptide ? N/A P03372 28042045
    369548 5krf:B (2.193) BS02 6WL ? N/A P03372 28042045
    369549 5krh:A (2.243) BS01 peptide ? N/A P03372 28042045
    369550 5krh:A (2.243) BS02 6WN ? N/A P03372 28042045
    369551 5krh:B (2.243) BS01 peptide ? N/A P03372 28042045
    369552 5krh:B (2.243) BS02 6WN ? N/A P03372 28042045
    369553 5kri:A (2.247) BS01 peptide ? N/A P03372 28042045
    369554 5kri:A (2.247) BS02 6WM ? N/A P03372 28042045
    369555 5kri:B (2.247) BS01 peptide ? N/A P03372 28042045
    369556 5kri:B (2.247) BS02 6WM ? N/A P03372 28042045
    369557 5krj:A (2.7) BS01 peptide ? N/A P03372 28042045
    369558 5krj:A (2.7) BS02 6WP ? N/A P03372 28042045
    369559 5krj:B (2.7) BS01 peptide ? N/A P03372 28042045
    369560 5krj:B (2.7) BS02 6WP ? N/A P03372 28042045
    369561 5krk:A (2.391) BS01 peptide ? N/A P03372 28042045
    369562 5krk:A (2.391) BS02 6WQ ? N/A P03372 28042045
    369563 5krk:B (2.391) BS01 peptide ? N/A P03372 28042045
    369564 5krk:B (2.391) BS02 6WQ ? N/A P03372 28042045
    369565 5krl:A (2.4) BS01 peptide ? N/A P03372 28042045
    369566 5krl:A (2.4) BS02 6WR ? N/A P03372 28042045
    369567 5krl:B (2.4) BS01 peptide ? N/A P03372 28042045
    369568 5krl:B (2.4) BS02 6WR ? N/A P03372 28042045
    369569 5krm:A (2.24) BS01 peptide ? N/A P03372 28042045
    369570 5krm:A (2.24) BS02 6WU ? N/A P03372 28042045
    369571 5krm:B (2.24) BS01 peptide ? N/A P03372 28042045
    369572 5krm:B (2.24) BS02 6WU ? N/A P03372 28042045
    369573 5kro:A (2.1) BS01 peptide ? N/A P03372 28042045
    369574 5kro:A (2.1) BS02 6WW ? N/A P03372 28042045
    369575 5kro:B (2.1) BS01 peptide ? N/A P03372 28042045
    369576 5kro:B (2.1) BS02 6WW ? N/A P03372 28042045
    369577 5krq:A (2.086) BS01 FAD 1.6.3.5 GO:0000166 ... Q48MT7 27769837
    369578 5krq:A (2.086) BS02 NDP 1.6.3.5 GO:0000166 ... Q48MT7 27769837
    369579 5krq:B (2.086) BS01 FAD 1.6.3.5 GO:0000166 ... Q48MT7 27769837
    369580 5krq:B (2.086) BS02 NDP 1.6.3.5 GO:0000166 ... Q48MT7 27769837
    369581 5krr:A (2.5) BS01 MN 1.1.1.267 GO:0008299 ... Q8DBF5 30278288
    369582 5krr:B (2.5) BS01 MN 1.1.1.267 GO:0008299 ... Q8DBF5 30278288
    369583 5krs:A (1.7) BS01 6XI 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 27645997
    369584 5krt:A (1.651) BS01 6W6 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 27645997
    369585 5krt:A (1.651) BS02 6W6 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 27645997
    369586 5kru:A (1.6) BS01 THP 3.1.31.1 GO:0003676 ... P00644 N/A
    369587 5kru:A (1.6) BS02 CA 3.1.31.1 GO:0003676 ... P00644 N/A
    369588 5ks1:A (2.4) BS01 MN 1.1.1.267 GO:0008299 ... Q8DBF5 30278288
    369589 5ks1:B (2.4) BS01 PO4 1.1.1.267 GO:0008299 ... Q8DBF5 30278288
    369590 5ks1:B (2.4) BS02 MN 1.1.1.267 GO:0008299 ... Q8DBF5 30278288
    369591 5ks7:A (2.9) BS01 2BA 7.6.2.9 N/A Q9KHT9 27378384
    369592 5ks7:B (2.9) BS01 2BA 7.6.2.9 N/A Q9KHT9 27378384
    369593 5ks8:C (3.01) BS01 PYR ? GO:0003824 ... Q1H157 27708276
    369594 5ks8:C (3.01) BS02 MN ? GO:0003824 ... Q1H157 27708276
    369595 5ks8:D (3.01) BS01 BTI ? GO:0003824 ... Q1H157 27708276
    369596 5ks8:D (3.01) BS02 PYR ? GO:0003824 ... Q1H157 27708276
    369597 5ks8:D (3.01) BS03 MN ? GO:0003824 ... Q1H157 27708276
    369598 5ks8:F (3.01) BS01 MN ? GO:0003824 ... Q1H157 27708276
    369599 5ks9:A (2.55) BS01 peptide ? GO:0006955 ... L8E864 27568928
    369600 5ks9:B (2.55) BS01 peptide ? GO:0006955 ... A0A0U5Q247
    R9XSW3
    27568928

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).