SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    371801 5lbi:A (1.43) BS01 CA ? GO:0003677 ... O74036 27725183
    371802 5lbo:A (2.25) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 29672041
    371803 5lbo:A (2.25) BS02 6M5 3.1.4.53 GO:0004114 ... Q08499 29672041 BindingDB: IC50=0.630957nM
    371804 5lbo:B (2.25) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 29672041
    371805 5lbo:B (2.25) BS02 6M5 3.1.4.53 GO:0004114 ... Q08499 29672041 BindingDB: IC50=0.630957nM
    371806 5lbo:C (2.25) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 29672041
    371807 5lbo:C (2.25) BS02 6M5 3.1.4.53 GO:0004114 ... Q08499 29672041 BindingDB: IC50=0.630957nM
    371808 5lbo:D (2.25) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 29672041
    371809 5lbo:D (2.25) BS02 6M5 3.1.4.53 GO:0004114 ... Q08499 29672041 BindingDB: IC50=0.630957nM
    371810 5lbp:A (1.76) BS01 PO4 ? GO:0000166 ... Q8EP31 28446708
    371811 5lbq:A (3.3) BS01 FAD 1.14.99.66 GO:0005634 ... O60341 27626075
    371812 5lbq:A (3.3) BS02 767 1.14.99.66 GO:0005634 ... O60341 27626075
    371813 5lbq:A (3.3) BS03 767 1.14.99.66 GO:0005634 ... O60341 27626075
    371814 5lbr:A (2.2) BS01 LBV 2.7.13.3 GO:0006355 ... Q9RZA4 27756898
    371815 5lbt:A (1.75) BS01 ZN 1.10.5.1 GO:0001512 ... P16083 N/A
    371816 5lbt:A (1.75) BS02 FAD 1.10.5.1 GO:0001512 ... P16083 N/A
    371817 5lbt:A (1.75) BS03 6T0 1.10.5.1 GO:0001512 ... P16083 N/A
    371818 5lbt:A (1.75) BS04 6T0 1.10.5.1 GO:0001512 ... P16083 N/A
    371819 5lbt:B (1.75) BS01 6T0 1.10.5.1 GO:0001512 ... P16083 N/A
    371820 5lbt:B (1.75) BS02 FAD 1.10.5.1 GO:0001512 ... P16083 N/A
    371821 5lbt:B (1.75) BS03 ZN 1.10.5.1 GO:0001512 ... P16083 N/A
    371822 5lbt:B (1.75) BS04 6T0 1.10.5.1 GO:0001512 ... P16083 N/A
    371823 5lbu:A (1.65) BS01 ZN 1.10.5.1 GO:0001512 ... P16083 N/A
    371824 5lbu:A (1.65) BS02 FAD 1.10.5.1 GO:0001512 ... P16083 N/A
    371825 5lbu:A (1.65) BS03 C09 1.10.5.1 GO:0001512 ... P16083 N/A
    371826 5lbu:A (1.65) BS04 C09 1.10.5.1 GO:0001512 ... P16083 N/A
    371827 5lbu:B (1.65) BS01 C09 1.10.5.1 GO:0001512 ... P16083 N/A
    371828 5lbu:B (1.65) BS02 C09 1.10.5.1 GO:0001512 ... P16083 N/A
    371829 5lbu:B (1.65) BS03 FAD 1.10.5.1 GO:0001512 ... P16083 N/A
    371830 5lbu:B (1.65) BS04 ZN 1.10.5.1 GO:0001512 ... P16083 N/A
    371831 5lbu:B (1.65) BS05 C09 1.10.5.1 GO:0001512 ... P16083 N/A
    371832 5lbv:B (2.2) BS01 FUC 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0046983 ... A0A024B7W1 27338953
    371833 5lbw:A (1.9) BS01 ZN 1.10.5.1 GO:0001512 ... P16083 29191878
    371834 5lbw:A (1.9) BS02 FAD 1.10.5.1 GO:0001512 ... P16083 29191878
    371835 5lbw:A (1.9) BS03 V0L 1.10.5.1 GO:0001512 ... P16083 29191878
    371836 5lbw:A (1.9) BS04 V0L 1.10.5.1 GO:0001512 ... P16083 29191878
    371837 5lbw:B (1.9) BS01 V0L 1.10.5.1 GO:0001512 ... P16083 29191878
    371838 5lbw:B (1.9) BS02 FAD 1.10.5.1 GO:0001512 ... P16083 29191878
    371839 5lbw:B (1.9) BS03 ZN 1.10.5.1 GO:0001512 ... P16083 29191878
    371840 5lbw:B (1.9) BS04 V0L 1.10.5.1 GO:0001512 ... P16083 29191878
    371841 5lbx:A (2.5) BS01 NAP 1.3.1.104 GO:0005739 ... Q8WZM3 28504678
    371842 5lbx:A (2.5) BS02 COO 1.3.1.104 GO:0005739 ... Q8WZM3 28504678
    371843 5lbx:A (2.5) BS03 COO 1.3.1.104 GO:0005739 ... Q8WZM3 28504678
    371844 5lbx:B (2.5) BS01 COO 1.3.1.104 GO:0005739 ... Q8WZM3 28504678
    371845 5lbx:B (2.5) BS02 NAP 1.3.1.104 GO:0005739 ... Q8WZM3 28504678
    371846 5lbx:B (2.5) BS03 COO 1.3.1.104 GO:0005739 ... Q8WZM3 28504678
    371847 5lby:A (1.4) BS01 ZN 1.10.5.1 GO:0001512 ... P16083 29191878
    371848 5lby:A (1.4) BS02 FAD 1.10.5.1 GO:0001512 ... P16083 29191878
    371849 5lby:A (1.4) BS03 6T2 1.10.5.1 GO:0001512 ... P16083 29191878
    371850 5lby:A (1.4) BS04 6T2 1.10.5.1 GO:0001512 ... P16083 29191878
    371851 5lby:B (1.4) BS01 6T2 1.10.5.1 GO:0001512 ... P16083 29191878
    371852 5lby:B (1.4) BS02 FAD 1.10.5.1 GO:0001512 ... P16083 29191878
    371853 5lby:B (1.4) BS03 ZN 1.10.5.1 GO:0001512 ... P16083 29191878
    371854 5lby:B (1.4) BS04 6T2 1.10.5.1 GO:0001512 ... P16083 29191878
    371855 5lbz:A (1.4) BS01 FAD 1.10.5.1 GO:0001512 ... P16083 29191878
    371856 5lbz:A (1.4) BS02 6T3 1.10.5.1 GO:0001512 ... P16083 29191878
    371857 5lbz:A (1.4) BS03 ZN 1.10.5.1 GO:0001512 ... P16083 29191878
    371858 5lbz:A (1.4) BS04 6T3 1.10.5.1 GO:0001512 ... P16083 29191878
    371859 5lbz:B (1.4) BS01 6T3 1.10.5.1 GO:0001512 ... P16083 29191878
    371860 5lbz:B (1.4) BS02 FAD 1.10.5.1 GO:0001512 ... P16083 29191878
    371861 5lbz:B (1.4) BS03 6T3 1.10.5.1 GO:0001512 ... P16083 29191878
    371862 5lbz:B (1.4) BS04 ZN 1.10.5.1 GO:0001512 ... P16083 29191878
    371863 5lc0:A (2.7) BS01 6T8 3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003723 ... A0A140DLX4 27386922
    371864 5lc0:A (2.7) BS02 6T8 3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003723 ... A0A140DLX4 27386922
    371865 5lc0:B (2.7) BS01 6T8 3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003723 ... A0A140DLX4 27386922
    371866 5lc0:B (2.7) BS02 6T8 3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003723 ... A0A140DLX4 27386922
    371867 5lc1:A (2.1) BS01 NAD 1.1.1.103 N/A Q7YW97 30198897
    371868 5lc1:A (2.1) BS02 PYR 1.1.1.103 N/A Q7YW97 30198897
    371869 5lc1:B (2.1) BS01 NAD 1.1.1.103 N/A Q7YW97 30198897
    371870 5lc1:B (2.1) BS02 PYR 1.1.1.103 N/A Q7YW97 30198897
    371871 5lc1:C (2.1) BS01 NAD 1.1.1.103 N/A Q7YW97 30198897
    371872 5lc1:C (2.1) BS02 PYR 1.1.1.103 N/A Q7YW97 30198897
    371873 5lc1:D (2.1) BS01 NAD 1.1.1.103 N/A Q7YW97 30198897
    371874 5lc1:D (2.1) BS02 PYR 1.1.1.103 N/A Q7YW97 30198897
    371875 5lc1:E (2.1) BS01 NAD 1.1.1.103 N/A Q7YW97 30198897
    371876 5lc1:E (2.1) BS02 PYR 1.1.1.103 N/A Q7YW97 30198897
    371877 5lc1:F (2.1) BS01 NAD 1.1.1.103 N/A Q7YW97 30198897
    371878 5lc1:F (2.1) BS02 PYR 1.1.1.103 N/A Q7YW97 30198897
    371879 5lc5:B (4.35) BS01 SF4 7.1.1.2 GO:0008137 ... P42026 27509854
    371880 5lc5:D (4.35) BS01 SF4 7.1.1.2 GO:0003954 ... P17694 27509854
    371881 5lc5:E (4.35) BS01 FES 7.1.1.2 GO:0003954 ... P04394 27509854
    371882 5lc5:F (4.35) BS01 FMN 7.1.1.2 GO:0005739 ... P25708 27509854
    371883 5lc5:F (4.35) BS02 SF4 7.1.1.2 GO:0005739 ... P25708 27509854
    371884 5lc5:G (4.35) BS01 SF4 7.1.1.2 GO:0008137 ... P15690 27509854
    371885 5lc5:G (4.35) BS02 SF4 7.1.1.2 GO:0008137 ... P15690 27509854
    371886 5lc5:G (4.35) BS03 FES 7.1.1.2 GO:0008137 ... P15690 27509854
    371887 5lc5:I (4.35) BS01 SF4 7.1.1.2 GO:0016020 ... P42028 27509854
    371888 5lc5:I (4.35) BS02 SF4 7.1.1.2 GO:0016020 ... P42028 27509854
    371889 5lc5:P (4.35) BS01 NAP N/A N/A N/A 27509854
    371890 5lc5:R (4.35) BS01 ZN ? N/A P23934 27509854
    371891 5lc8:A (1.8) BS01 FE2 1.13.11.12
    1.13.11.58
    1.13.11.77
    GO:0016702 ... Q8RNT4 28093240
    371892 5lc8:A (1.8) BS02 ZPE 1.13.11.12
    1.13.11.58
    1.13.11.77
    GO:0016702 ... Q8RNT4 28093240
    371893 5lc9:B (1.903) BS01 PO4 N/A GO:0006797 ... N/A 29531036
    371894 5lc9:C (1.903) BS01 PO4 N/A GO:0006797 ... N/A 29531036
    371895 5lc9:D (1.903) BS01 PO4 N/A GO:0006797 ... N/A 29531036
    371896 5lca:A (1.93) BS01 ZN 3.5.2.6 N/A Q9K2N0 28451231
    371897 5lca:A (1.93) BS02 ZN 3.5.2.6 N/A Q9K2N0 28451231
    371898 5lca:A (1.93) BS03 B06 3.5.2.6 N/A Q9K2N0 28451231 MOAD: ic50=32.8uM
    371899 5lcb:A (26.5) BS01 BCL ? N/A P0A314 27534696
    371900 5lcb:A (26.5) BS02 BCL ? N/A P0A314 27534696
    371901 5lcb:B (26.5) BS01 BCL ? N/A P0A314 27534696
    371902 5lcb:B (26.5) BS02 BCL ? N/A P0A314 27534696
    371903 5lcb:C (26.5) BS01 BCL ? N/A P0A314 27534696
    371904 5lcb:D (26.5) BS01 BCL ? N/A P0A314 27534696
    371905 5lcb:E (26.5) BS01 BCL ? N/A P0A314 27534696
    371906 5lcb:F (26.5) BS01 BCL ? N/A P0A314 27534696
    371907 5lcb:F (26.5) BS02 BCL ? N/A P0A314 27534696
    371908 5lcb:G (26.5) BS01 BCL ? N/A P0A314 27534696
    371909 5lcb:G (26.5) BS02 BCL ? N/A P0A314 27534696
    371910 5lcb:H (26.5) BS01 BCL ? N/A P0A314 27534696
    371911 5lcb:I (26.5) BS01 BCL ? N/A P0A314 27534696
    371912 5lcb:I (26.5) BS02 BCL ? N/A P0A314 27534696
    371913 5lcb:J (26.5) BS01 BCL ? N/A P0A314 27534696
    371914 5lcb:J (26.5) BS02 BCL ? N/A P0A314 27534696
    371915 5lcb:K (26.5) BS01 BCL ? N/A P0A314 27534696
    371916 5lcb:L (26.5) BS01 BCL ? N/A P0A314 27534696
    371917 5lcb:M (26.5) BS01 BCL ? N/A P0A314 27534696
    371918 5lcb:M (26.5) BS02 BCL ? N/A P0A314 27534696
    371919 5lcb:N (26.5) BS01 BCL ? N/A P0A314 27534696
    371920 5lcb:N (26.5) BS02 BCL ? N/A P0A314 27534696
    371921 5lcd:A (2.66) BS01 AMP N/A GO:0006797 ... N/A 29531036
    371922 5lcd:A (2.66) BS02 PO4 N/A GO:0006797 ... N/A 29531036
    371923 5lcd:B (2.66) BS01 AMP N/A GO:0006797 ... N/A 29531036
    371924 5lcd:B (2.66) BS02 PO4 N/A GO:0006797 ... N/A 29531036
    371925 5lcd:C (2.66) BS01 AMP N/A GO:0006797 ... N/A 29531036
    371926 5lcd:C (2.66) BS02 PO4 N/A GO:0006797 ... N/A 29531036
    371927 5lcd:D (2.66) BS01 AMP N/A GO:0006797 ... N/A 29531036
    371928 5lcd:D (2.66) BS02 PO4 N/A GO:0006797 ... N/A 29531036
    371929 5lce:H (1.39) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 31633354
    371930 5lce:H (1.39) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 31633354
    371931 5lce:H (1.39) BS03 6TH 3.4.21.5 GO:0004252 ... P00734 31633354 BindingDB: Ki=9.2nM
    371932 5lcf:A (1.86) BS01 ZN 3.5.2.6 N/A Q9K2N0 28451231
    371933 5lcf:A (1.86) BS02 ZN 3.5.2.6 N/A Q9K2N0 28451231
    371934 5lcf:A (1.86) BS03 6TJ 3.5.2.6 N/A Q9K2N0 28451231 MOAD: ic50=17.8uM
    371935 5lch:A (1.94) BS01 ZN 3.5.2.6 N/A Q9K2N0 28451231
    371936 5lch:A (1.94) BS02 ZN 3.5.2.6 N/A Q9K2N0 28451231
    371937 5lch:A (1.94) BS03 6TU 3.5.2.6 N/A Q9K2N0 28451231 MOAD: ic50=20.3uM
    371938 5lcj:A (1.78) BS01 6TS 2.7.11.24 GO:0000165 ... P28482 27385078
    371939 5lck:A (1.89) BS01 6TT 2.7.11.24 GO:0000165 ... P28482 27385078
    371940 5lcl:A (2.2) BS01 dna ? GO:0003684 ... P28519 28444956
    371941 5lcl:A (2.2) BS02 ZN ? GO:0003684 ... P28519 28444956
    371942 5lcl:B (2.2) BS01 dna ? GO:0000110 ... P28519 28444956
    371943 5lcl:B (2.2) BS02 ZN ? GO:0000110 ... P28519 28444956
    371944 5lcm:A (1.9) BS01 dna ? GO:0003684 ... P28519 28444956
    371945 5lcm:A (1.9) BS02 dna ? GO:0003684 ... P28519 28444956
    371946 5lcm:A (1.9) BS03 ZN ? GO:0003684 ... P28519 28444956
    371947 5lcm:B (1.9) BS01 dna ? GO:0003684 ... P28519 28444956
    371948 5lcm:B (1.9) BS02 dna ? GO:0003684 ... P28519 28444956
    371949 5lcm:B (1.9) BS03 ZN ? GO:0003684 ... P28519 28444956
    371950 5lcp:A (1.433) BS01 peptide 2.7.11.11 GO:0000287 ... P25321 N/A
    371951 5lcp:A (1.433) BS02 M77 2.7.11.11 GO:0000287 ... P25321 N/A
    371952 5lcq:A (1.423) BS01 peptide 2.7.11.11 GO:0000287 ... P25321 N/A
    371953 5lcq:A (1.423) BS02 6TV 2.7.11.11 GO:0000287 ... P25321 N/A
    371954 5lcr:A (1.565) BS01 peptide 2.7.11.11 GO:0000287 ... P25321 N/A
    371955 5lcr:A (1.565) BS02 6TX 2.7.11.11 GO:0000287 ... P25321 N/A
    371956 5lct:A (1.615) BS01 peptide 2.7.11.11 GO:0000287 ... P25321 N/A
    371957 5lct:A (1.615) BS02 6TY 2.7.11.11 GO:0000287 ... P25321 N/A
    371958 5lcu:A (1.579) BS01 peptide 2.7.11.11 GO:0000287 ... P25321 N/A
    371959 5lcu:A (1.579) BS02 IQP 2.7.11.11 GO:0000287 ... P25321 N/A
    371960 5lcv:B (2.64) BS01 FUC 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0046983 ... A0A024B7W1 27338953
    371961 5lcw:J (4.2) BS01 peptide ? GO:0005515 ... Q13042 27509861
    371962 5lcw:K (4.2) BS01 peptide ? GO:0005515 ... Q13042 27509861
    371963 5lcw:O (4.2) BS01 peptide ? GO:0005634 ... Q9UJX4 27509861
    371964 5lcx:A (1.709) BS01 NAP 1.3.1.82 GO:0005737 ... Q6WAU1 27411040
    371965 5lcz:A (2.325) BS01 GSH 1.11.1.-
    2.5.1.18
    5.3.3.-
    GO:0004364 ... P04903
    P08263
    27612661
    371966 5lcz:B (2.325) BS01 GSH 1.11.1.-
    2.5.1.18
    5.3.3.-
    GO:0004364 ... P04903
    P08263
    27612661
    371967 5ld1:A (2.09) BS01 ATP N/A GO:0006797 ... N/A 29531036
    371968 5ld1:A (2.09) BS02 ATP N/A GO:0006797 ... N/A 29531036
    371969 5ld1:A (2.09) BS03 ATP N/A GO:0006797 ... N/A 29531036
    371970 5ld1:B (2.09) BS01 ATP N/A GO:0006797 ... N/A 29531036
    371971 5ld1:B (2.09) BS02 ATP N/A GO:0006797 ... N/A 29531036
    371972 5ld1:B (2.09) BS03 ATP N/A GO:0006797 ... N/A 29531036
    371973 5ld1:C (2.09) BS01 ATP N/A GO:0006797 ... N/A 29531036
    371974 5ld1:C (2.09) BS02 ATP N/A GO:0006797 ... N/A 29531036
    371975 5ld1:C (2.09) BS03 ATP N/A GO:0006797 ... N/A 29531036
    371976 5ld1:C (2.09) BS04 MG N/A GO:0006797 ... N/A 29531036
    371977 5ld1:D (2.09) BS01 ATP N/A GO:0006797 ... N/A 29531036
    371978 5ld1:D (2.09) BS02 ATP N/A GO:0006797 ... N/A 29531036
    371979 5ld1:D (2.09) BS03 ATP N/A GO:0006797 ... N/A 29531036
    371980 5ld2:B (3.83) BS01 dna 3.1.11.5
    5.6.2.4
    GO:0000287 ... P08394 27644322
    371981 5ld2:B (3.83) BS02 ANP 3.1.11.5
    5.6.2.4
    GO:0000287 ... P08394 27644322
    371982 5ld2:C (3.83) BS01 dna 3.1.11.5 GO:0000724 ... P07648 27644322
    371983 5ld2:D (3.83) BS01 dna 5.6.2.3 GO:0000724 ... P04993 27644322
    371984 5ld5:A (2.1906) BS01 NAD 1.2.1.- GO:0000166 ... F1T6A5 28443070
    371985 5ld5:B (2.1906) BS01 NAD 1.2.1.- GO:0000166 ... F1T6A5 28443070
    371986 5ld5:C (2.1906) BS01 NAD 1.2.1.- GO:0000166 ... F1T6A5 28443070
    371987 5ld5:D (2.1906) BS01 NAD 1.2.1.- GO:0000166 ... F1T6A5 28443070
    371988 5ld8:A (2.13) BS01 6U5 2.3.1.293 GO:0004315 ... P9WQD9 27581223 MOAD: Kd=9nM
    371989 5ld8:B (2.13) BS01 6U5 2.3.1.293 GO:0004315 ... P9WQD9 27581223 MOAD: Kd=9nM
    371990 5ld9:A (1.733) BS01 ZN 3.4.19.15 GO:0006508 ... Q8U1Y4 28479062
    371991 5ld9:B (1.733) BS01 ZN 3.4.19.15 GO:0006508 ... Q8U1Y4 28479062
    371992 5lda:A (1.9) BS01 ZN 3.4.19.15 GO:0006508 ... Q8U1Y4 28479062
    371993 5ldb:A (2.3) BS01 ADP N/A GO:0006797 ... N/A 29531036
    371994 5ldb:A (2.3) BS02 PO4 N/A GO:0006797 ... N/A 29531036
    371995 5ldb:B (2.3) BS01 ADP N/A GO:0006797 ... N/A 29531036
    371996 5ldb:B (2.3) BS02 PO4 N/A GO:0006797 ... N/A 29531036
    371997 5ldb:B (2.3) BS03 MG N/A GO:0006797 ... N/A 29531036
    371998 5ldb:C (2.3) BS01 ADP N/A GO:0006797 ... N/A 29531036
    371999 5ldb:C (2.3) BS02 PO4 N/A GO:0006797 ... N/A 29531036
    372000 5ldb:D (2.3) BS01 ADP N/A GO:0006797 ... N/A 29531036

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).