SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    372001 5ldb:D (2.3) BS02 PO4 N/A GO:0006797 ... N/A 29531036
    372002 5ldb:D (2.3) BS03 MG N/A GO:0006797 ... N/A 29531036
    372003 5lde:A (3.38) BS01 peptide ? GO:0005618 ... F5HEZ4
    P19909
    28931678
    372004 5lde:B (3.38) BS01 peptide ? GO:0005618 ... F5HEZ4
    P19909
    28931678
    372005 5ldf:M (6.2) BS01 GLC ? GO:0008643 ... P0AEY0 27485862
    372006 5ldf:M (6.2) BS02 GLC ? GO:0008643 ... P0AEY0 27485862
    372007 5ldf:N (6.2) BS01 GLC ? GO:0008643 ... P0AEY0 27485862
    372008 5ldf:N (6.2) BS02 GLC ? GO:0008643 ... P0AEY0 27485862
    372009 5ldf:O (6.2) BS01 GLC ? GO:0008643 ... P0AEY0 27485862
    372010 5ldf:O (6.2) BS02 GLC ? GO:0008643 ... P0AEY0 27485862
    372011 5ldf:P (6.2) BS01 GLC ? GO:0008643 ... P0AEY0 27485862
    372012 5ldf:P (6.2) BS02 GLC ? GO:0008643 ... P0AEY0 27485862
    372013 5ldf:Q (6.2) BS01 GLC ? GO:0008643 ... P0AEY0 27485862
    372014 5ldf:Q (6.2) BS02 GLC ? GO:0008643 ... P0AEY0 27485862
    372015 5ldf:R (6.2) BS01 GLC ? GO:0008643 ... P0AEY0 27485862
    372016 5ldf:R (6.2) BS02 GLC ? GO:0008643 ... P0AEY0 27485862
    372017 5ldf:S (6.2) BS01 GLC ? GO:0008643 ... P0AEY0 27485862
    372018 5ldf:S (6.2) BS02 GLC ? GO:0008643 ... P0AEY0 27485862
    372019 5ldf:T (6.2) BS01 GLC ? GO:0008643 ... P0AEY0 27485862
    372020 5ldf:T (6.2) BS02 GLC ? GO:0008643 ... P0AEY0 27485862
    372021 5ldf:U (6.2) BS01 GLC ? GO:0008643 ... P0AEY0 27485862
    372022 5ldf:U (6.2) BS02 GLC ? GO:0008643 ... P0AEY0 27485862
    372023 5ldf:V (6.2) BS01 GLC ? GO:0008643 ... P0AEY0 27485862
    372024 5ldf:V (6.2) BS02 GLC ? GO:0008643 ... P0AEY0 27485862
    372025 5ldf:W (6.2) BS01 GLC ? GO:0008643 ... P0AEY0 27485862
    372026 5ldf:W (6.2) BS02 GLC ? GO:0008643 ... P0AEY0 27485862
    372027 5ldf:X (6.2) BS01 GLC ? GO:0008643 ... P0AEY0 27485862
    372028 5ldf:X (6.2) BS02 GLC ? GO:0008643 ... P0AEY0 27485862
    372029 5ldg:A (1.3) BS01 NAP 1.3.1.82 GO:0005737 ... Q6WAU1 27411040
    372030 5ldg:A (1.3) BS02 IT9 1.3.1.82 GO:0005737 ... Q6WAU1 27411040
    372031 5ldh:A (2.7) BS01 LNC 1.1.1.27 GO:0003824 ... P00336 7338899
    372032 5ldh:B (2.7) BS01 LNC 1.1.1.27 GO:0003824 ... P00336 7338899
    372033 5ldj:A (2.802) BS01 PO4 3.1.4.58 GO:0004113 ... A0A140NFI1 28141848
    372034 5ldj:B (2.802) BS01 PO4 3.1.4.58 GO:0004113 ... A0A140NFI1 28141848
    372035 5ldj:C (2.802) BS01 PO4 3.1.4.58 GO:0004113 ... A0A140NFI1 28141848
    372036 5ldj:D (2.802) BS01 PO4 3.1.4.58 GO:0004113 ... A0A140NFI1 28141848
    372037 5ldj:D (2.802) BS02 PO4 3.1.4.58 GO:0004113 ... A0A140NFI1 28141848
    372038 5ldk:B (2.099) BS01 ATP 3.1.4.58 GO:0004113 ... A0A140NFI1 28141848 MOAD: Ka=15000M^-1
    372039 5ldm:A (2.46) BS01 2AM 3.1.4.58 GO:0004113 ... A0A140NFI1 28141848 MOAD: Ka=7210M^-1
    372040 5ldm:B (2.46) BS01 2AM 3.1.4.58 GO:0004113 ... A0A140NFI1 28141848 MOAD: Ka=7210M^-1
    372041 5ldm:B (2.46) BS02 2AM 3.1.4.58 GO:0004113 ... A0A140NFI1 28141848 MOAD: Ka=7210M^-1
    372042 5ldo:A (2.752) BS01 3AM 3.1.4.58 GO:0004113 ... A0A140NFI1 28141848
    372043 5ldp:A (1.8) BS01 ATP 3.1.4.58 GO:0004113 ... A0A140NFI1 28141848 MOAD: Ka=15000M^-1
    372044 5ldp:B (1.8) BS01 ATP 3.1.4.58 GO:0004113 ... A0A140NFI1 28141848 MOAD: Ka=15000M^-1
    372045 5ldp:B (1.8) BS02 ATP 3.1.4.58 GO:0004113 ... A0A140NFI1 28141848 MOAD: Ka=15000M^-1
    372046 5ldq:A (1.7) BS01 NAP 3.1.4.58 GO:0004113 ... A0A140NFI1 28141848 MOAD: Kd=40uM
    372047 5ldq:A (1.7) BS02 NAP 3.1.4.58 GO:0004113 ... A0A140NFI1 28141848 MOAD: Kd=40uM
    372048 5ldq:B (1.7) BS01 NAP 3.1.4.58 GO:0004113 ... A0A140NFI1 28141848 MOAD: Kd=40uM
    372049 5ldq:B (1.7) BS02 NAP 3.1.4.58 GO:0004113 ... A0A140NFI1 28141848 MOAD: Kd=40uM
    372050 5ldq:C (1.7) BS01 NAP 3.1.4.58 GO:0004113 ... A0A140NFI1 28141848 MOAD: Kd=40uM
    372051 5ldq:D (1.7) BS01 NAP 3.1.4.58 GO:0004113 ... A0A140NFI1 28141848 MOAD: Kd=40uM
    372052 5ldr:A (3.15) BS01 GAL 3.2.1.23 GO:0004553 ... D1LZK0 27599737
    372053 5ldr:A (3.15) BS02 GLC 3.2.1.23 GO:0004553 ... D1LZK0 27599737
    372054 5ldr:B (3.15) BS01 GAL ? GO:0004553 ... D1LZK0 27599737
    372055 5lds:A (2.0) BS01 BMA 3.4.11.2 GO:0001525 ... P15145 28393915
    372056 5lds:A (2.0) BS02 ZN 3.4.11.2 GO:0001525 ... P15145 28393915
    372057 5lds:B (2.0) BS01 ZN 3.4.11.2 GO:0001525 ... P15145 28393915
    372058 5lds:C (2.0) BS01 ZN 3.4.11.2 GO:0001525 ... P15145 28393915
    372059 5lds:D (2.0) BS01 BMA 3.4.11.2 GO:0001525 ... P15145 28393915
    372060 5lds:D (2.0) BS02 BMA 3.4.11.2 GO:0001525 ... P15145 28393915
    372061 5lds:D (2.0) BS03 ZN 3.4.11.2 GO:0001525 ... P15145 28393915
    372062 5ldt:A (2.88) BS01 CA ? GO:0046872 ... Q659I5 27693650
    372063 5ldt:A (2.88) BS02 CA ? GO:0046872 ... Q659I5 27693650
    372064 5ldt:A (2.88) BS03 C8E ? GO:0046872 ... Q659I5 27693650
    372065 5ldt:A (2.88) BS04 CA ? GO:0046872 ... Q659I5 27693650
    372066 5ldt:A (2.88) BS05 C8E ? GO:0046872 ... Q659I5 27693650
    372067 5ldt:B (2.88) BS01 CA ? GO:0046872 ... Q659I5 27693650
    372068 5ldt:B (2.88) BS02 C8E ? GO:0046872 ... Q659I5 27693650
    372069 5ldt:B (2.88) BS03 CA ? GO:0046872 ... Q659I5 27693650
    372070 5ldt:B (2.88) BS04 CA ? GO:0046872 ... Q659I5 27693650
    372071 5ldt:B (2.88) BS05 C8E ? GO:0046872 ... Q659I5 27693650
    372072 5ldt:C (2.88) BS01 CA ? GO:0046872 ... Q659I5 27693650
    372073 5ldt:C (2.88) BS02 CA ? GO:0046872 ... Q659I5 27693650
    372074 5ldt:C (2.88) BS03 C8E ? GO:0046872 ... Q659I5 27693650
    372075 5ldt:C (2.88) BS04 CA ? GO:0046872 ... Q659I5 27693650
    372076 5ldt:C (2.88) BS05 C8E ? GO:0046872 ... Q659I5 27693650
    372077 5ldu:A (2.3) BS01 CU ? GO:0005507 ... A0A0A7M685 N/A
    372078 5ldu:A (2.3) BS02 CU ? GO:0005507 ... A0A0A7M685 N/A
    372079 5ldu:A (2.3) BS03 CU ? GO:0005507 ... A0A0A7M685 N/A
    372080 5ldu:A (2.3) BS04 CU ? GO:0005507 ... A0A0A7M685 N/A
    372081 5ldv:A (2.1) BS01 CA ? GO:0046872 ... Q659I5 27693650
    372082 5ldw:B (4.27) BS01 SF4 7.1.1.2 GO:0008137 ... P42026 27509854
    372083 5ldw:D (4.27) BS01 SF4 7.1.1.2 GO:0003954 ... P17694 27509854
    372084 5ldw:E (4.27) BS01 FES 7.1.1.2 GO:0016491 ... P04394 27509854
    372085 5ldw:F (4.27) BS01 FMN 7.1.1.2 GO:0005739 ... P25708 27509854
    372086 5ldw:F (4.27) BS02 SF4 7.1.1.2 GO:0005739 ... P25708 27509854
    372087 5ldw:G (4.27) BS01 SF4 7.1.1.2 GO:0008137 ... P15690 27509854
    372088 5ldw:G (4.27) BS02 SF4 7.1.1.2 GO:0008137 ... P15690 27509854
    372089 5ldw:G (4.27) BS03 FES 7.1.1.2 GO:0008137 ... P15690 27509854
    372090 5ldw:I (4.27) BS01 SF4 7.1.1.2 GO:0016020 ... P42028 27509854
    372091 5ldw:I (4.27) BS02 SF4 7.1.1.2 GO:0016020 ... P42028 27509854
    372092 5ldw:P (4.27) BS01 NAP N/A N/A N/A 27509854
    372093 5ldw:R (4.27) BS01 ZN ? N/A P23934 27509854
    372094 5ldx:B (5.6) BS01 SF4 7.1.1.2 GO:0008137 ... P42026 27509854
    372095 5ldx:D (5.6) BS01 SF4 7.1.1.2 GO:0003954 ... P17694 27509854
    372096 5ldx:E (5.6) BS01 FES 7.1.1.2 GO:0016491 ... P04394 27509854
    372097 5ldx:F (5.6) BS01 FMN 7.1.1.2 GO:0005739 ... P25708 27509854
    372098 5ldx:F (5.6) BS02 SF4 7.1.1.2 GO:0005739 ... P25708 27509854
    372099 5ldx:G (5.6) BS01 SF4 7.1.1.2 GO:0008137 ... P15690 27509854
    372100 5ldx:G (5.6) BS02 SF4 7.1.1.2 GO:0008137 ... P15690 27509854
    372101 5ldx:G (5.6) BS03 FES 7.1.1.2 GO:0008137 ... P15690 27509854
    372102 5ldx:I (5.6) BS01 SF4 7.1.1.2 GO:0016020 ... P42028 27509854
    372103 5ldx:I (5.6) BS02 SF4 7.1.1.2 GO:0016020 ... P42028 27509854
    372104 5ldx:P (5.6) BS01 NAP N/A N/A N/A 27509854
    372105 5ldx:R (5.6) BS01 ZN ? N/A P23934 27509854
    372106 5ldz:A (2.2) BS01 ZN 3.1.3.11 GO:0000122 ... P09467 27841754
    372107 5ldz:A (2.2) BS02 ZN 3.1.3.11 GO:0000122 ... P09467 27841754
    372108 5ldz:B (2.2) BS01 ZN 3.1.3.11 GO:0000122 ... P09467 27841754
    372109 5ldz:C (2.2) BS01 ZN 3.1.3.11 GO:0000122 ... P09467 27841754
    372110 5ldz:D (2.2) BS01 ZN 3.1.3.11 GO:0000122 ... P09467 27841754
    372111 5ldz:D (2.2) BS02 ZN 3.1.3.11 GO:0000122 ... P09467 27841754
    372112 5ldz:E (2.2) BS01 ZN 3.1.3.11 GO:0000122 ... P09467 27841754
    372113 5ldz:E (2.2) BS02 ZN 3.1.3.11 GO:0000122 ... P09467 27841754
    372114 5ldz:F (2.2) BS01 ZN 3.1.3.11 GO:0000122 ... P09467 27841754
    372115 5le1:A (1.4) BS01 ZN 3.5.2.6 N/A Q9K2N0 28451231
    372116 5le1:A (1.4) BS02 ZN 3.5.2.6 N/A Q9K2N0 28451231
    372117 5le1:A (1.4) BS03 6UW 3.5.2.6 N/A Q9K2N0 28451231 MOAD: ic50=10.6uM
    372118 5le5:H (1.8) BS01 MG 3.4.25.1 GO:0004298 ... Q99436 27493187
    372119 5le5:I (1.8) BS01 MG 3.4.25.1 GO:0000502 ... P49720 27493187
    372120 5le5:K (1.8) BS01 MG 3.4.25.1 GO:0004298 ... P28074 27493187
    372121 5le5:V (1.8) BS01 MG 3.4.25.1 GO:0004298 ... Q99436 27493187
    372122 5le5:W (1.8) BS01 MG 3.4.25.1 GO:0000502 ... P49720 27493187
    372123 5le5:Y (1.8) BS01 MG 3.4.25.1 GO:0004298 ... P28074 27493187
    372124 5lef:A (2.088) BS01 GTP ? GO:0000139 ... P20340 29093437
    372125 5lef:A (2.088) BS02 MG ? GO:0000139 ... P20340 29093437
    372126 5lef:B (2.088) BS01 GTP ? GO:0000139 ... P20340 29093437
    372127 5lef:B (2.088) BS02 MG ? GO:0000139 ... P20340 29093437
    372128 5lej:A (2.7) BS01 dna ? GO:0003677 ... P22262 27930316
    372129 5lej:A (2.7) BS02 dna ? GO:0003677 ... P22262 27930316
    372130 5lej:B (2.7) BS01 dna ? GO:0003677 ... P22262 27930316
    372131 5lej:B (2.7) BS02 dna ? GO:0003677 ... P22262 27930316
    372132 5lek:A (2.8) BS01 dna ? GO:0003677 ... P22262 27930316
    372133 5lek:A (2.8) BS02 dna ? GO:0003677 ... P22262 27930316
    372134 5lek:B (2.8) BS01 dna ? GO:0003677 ... P22262 27930316
    372135 5lek:B (2.8) BS02 dna ? GO:0003677 ... P22262 27930316
    372136 5leo:A (1.6) BS01 peptide 3.4.24.75 N/A P10547 N/A
    372137 5leo:B (1.6) BS01 peptide 3.4.24.75 N/A P10547 N/A
    372138 5ler:1B (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372139 5ler:1C (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372140 5ler:1D (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372141 5ler:1E (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372142 5ler:1F (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372143 5ler:1G (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372144 5ler:1H (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372145 5ler:1I (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372146 5ler:1J (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372147 5ler:1K (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372148 5ler:1L (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372149 5ler:1M (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372150 5ler:2B (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372151 5ler:2C (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372152 5ler:2D (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372153 5ler:2E (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372154 5ler:2F (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372155 5ler:2G (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372156 5ler:2H (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372157 5ler:2I (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372158 5ler:2J (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372159 5ler:2K (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372160 5ler:2L (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372161 5ler:2M (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372162 5ler:3B (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372163 5ler:3C (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372164 5ler:3D (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372165 5ler:3E (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372166 5ler:3F (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372167 5ler:3G (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372168 5ler:3H (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372169 5ler:3I (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372170 5ler:3J (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372171 5ler:3K (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372172 5ler:3L (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372173 5ler:3M (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372174 5ler:4B (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372175 5ler:4C (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372176 5ler:4D (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372177 5ler:4E (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372178 5ler:4F (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372179 5ler:4G (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372180 5ler:4H (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372181 5ler:4I (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372182 5ler:4J (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372183 5ler:4K (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372184 5ler:4L (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372185 5ler:4M (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372186 5ler:5B (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372187 5ler:5C (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372188 5ler:5D (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372189 5ler:5E (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372190 5ler:5F (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372191 5ler:5G (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372192 5ler:5H (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372193 5ler:5I (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372194 5ler:5J (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372195 5ler:5K (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372196 5ler:5L (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372197 5ler:5M (5.0) BS01 6V6 ? GO:0005576 ... P04737 27610568
    372198 5lew:A (2.8) BS01 ZN 2.7.7.7 GO:0003824 ... P9WNT7 29021523
    372199 5lew:A (2.8) BS02 ZN 2.7.7.7 GO:0003824 ... P9WNT7 29021523
    372200 5lew:A (2.8) BS03 ZN 2.7.7.7 GO:0003824 ... P9WNT7 29021523

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).