SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    372801 5lj5:h (10.0) BS01 rna ? GO:0000243 ... Q02260 27459055
    372802 5lj5:j (10.0) BS01 rna ? GO:0000243 ... Q06217 27459055
    372803 5lj5:l (10.0) BS01 rna ? GO:0000243 ... Q02260 27459055
    372804 5lj5:m (10.0) BS01 rna ? GO:0000243 ... Q06217 27459055
    372805 5lj5:n (10.0) BS01 rna ? GO:0000243 ... P43321 27459055
    372806 5lj5:v (10.0) BS01 rna 2.3.2.27 GO:0000349 ... P32523 27459055
    372807 5lj5:x (10.0) BS01 rna N/A N/A N/A 27459055
    372808 5lj6:A (3.9) BS01 ATP 7.6.2.- GO:0005524 ... Q2EHL8 29109272
    372809 5lj6:A (3.9) BS02 MG 7.6.2.- GO:0005524 ... Q2EHL8 29109272
    372810 5lj7:A (3.25) BS01 ATP 7.6.2.- GO:0005524 ... Q2EHL8 29109272
    372811 5lj7:A (3.25) BS02 MG 7.6.2.- GO:0005524 ... Q2EHL8 29109272
    372812 5lj7:A (3.25) BS03 ATP 7.6.2.- GO:0005524 ... Q2EHL8 29109272
    372813 5lj7:B (3.25) BS01 ATP 7.6.2.- GO:0005524 ... Q2EHL8 29109272
    372814 5lj7:B (3.25) BS02 ATP 7.6.2.- GO:0005524 ... Q2EHL8 29109272
    372815 5lj7:B (3.25) BS03 MG 7.6.2.- GO:0005524 ... Q2EHL8 29109272
    372816 5ljb:A (1.263) BS01 RTL ? GO:0002138 ... P09455 28057518 MOAD: Kd=4.5nM
    372817 5ljc:A (1.433) BS01 RTL ? GO:0002138 ... P09455 28057518 MOAD: Kd=65nM
    372818 5ljd:A (1.61) BS01 RTL ? GO:0002138 ... P09455 28057518 MOAD: Kd=70nM
    372819 5lje:A (1.4) BS01 RTL ? GO:0005501 ... P09455 28057518 MOAD: Kd=250nM
    372820 5ljf:A (1.7344) BS01 BGC 3.2.1.4 GO:0000272 ... C1JI15 33559609
    372821 5ljf:A (1.7344) BS02 BGC 3.2.1.4 GO:0000272 ... C1JI15 33559609
    372822 5ljf:A (1.7344) BS03 BGC 3.2.1.4 GO:0000272 ... C1JI15 33559609
    372823 5ljf:B (1.7344) BS01 BGC 3.2.1.4 GO:0000272 ... C1JI15 33559609
    372824 5ljf:B (1.7344) BS02 BGC 3.2.1.4 GO:0000272 ... C1JI15 33559609
    372825 5ljf:B (1.7344) BS03 BGC 3.2.1.4 GO:0000272 ... C1JI15 33559609
    372826 5lji:A (2.07) BS01 FMN ? GO:0000166 ... Q8DPG4 27649488 MOAD: Kd=83nM
    372827 5lji:A (2.07) BS02 CA ? GO:0000166 ... Q8DPG4 27649488
    372828 5lji:C (2.07) BS01 FMN ? GO:0000166 ... Q8DPG4 27649488 MOAD: Kd=83nM
    372829 5lji:C (2.07) BS02 CA ? GO:0000166 ... Q8DPG4 27649488
    372830 5lji:C (2.07) BS03 CA ? GO:0000166 ... Q8DPG4 27649488
    372831 5ljj:A (3.0) BS01 AD5 2.7.12.1 GO:0004672 ... P33981 27699881
    372832 5ljn:A (2.701) BS01 peptide 2.3.2.31 GO:0004842 ... Q96EP0 27591049
    372833 5ljn:B (2.701) BS01 peptide 2.3.2.31 GO:0004842 ... Q96EP0 27591049
    372834 5ljp:A (1.1) BS01 FMN ? GO:0005515 ... P0A3E0 28702545 MOAD: Ka=83000000M^-1
    372835 5ljq:A (1.05) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 27933963
    372836 5ljq:A (1.05) BS02 ANV 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 27933963 MOAD: Ki=1nM
    372837 5ljt:A (1.0) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 27933963
    372838 5ljt:A (1.0) BS02 A6N 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 27933963 MOAD: Ki=1.2nM
    372839 5ljv:A (3.64) BS01 ADP 3.6.1.- GO:0005524 ... Q2W8Q6 27821762
    372840 5ljv:B (3.64) BS01 ADP 3.6.1.- GO:0005524 ... Q2W8Q6 27821762
    372841 5ljv:C (3.64) BS01 ADP 3.6.1.- GO:0005524 ... Q2W8Q6 27821762
    372842 5ljv:D (3.64) BS01 ADP 3.6.1.- GO:0005524 ... Q2W8Q6 27821762
    372843 5ljv:E (3.64) BS01 ADP 3.6.1.- GO:0005524 ... Q2W8Q6 27821762
    372844 5ljv:F (3.64) BS01 ADP 3.6.1.- GO:0005524 ... Q2W8Q6 27821762
    372845 5ljw:A (1.8) BS01 ANP 3.6.1.- GO:0005524 ... Q2W8Q6 27821762
    372846 5ljw:B (1.8) BS01 ANP 3.6.1.- GO:0005524 ... Q2W8Q6 27821762
    372847 5ljx:A (1.4) BS01 FUL ? GO:0019049 ... P08668 27783711
    372848 5ljz:A (1.6) BS01 FUL ? GO:0019049 ... P08668 27783711
    372849 5lk1:A (1.7) BS01 FUL ? GO:0019049 ... P08668 27783711
    372850 5lk2:A (1.6) BS01 FUL ? GO:0019049 ... P08668 27783711
    372851 5lk3:A (1.5) BS01 FUL ? GO:0019049 ... P08668 27783711
    372852 5lk5:A (2.3) BS01 CA ? GO:0005509 ... P27797 27840680
    372853 5lk5:B (2.3) BS01 CA ? GO:0005509 ... P27797 27840680
    372854 5lk5:C (2.3) BS01 CA ? GO:0005509 ... P27797 27840680
    372855 5lk5:D (2.3) BS01 CA ? GO:0005509 ... P27797 27840680
    372856 5lk5:E (2.3) BS01 CA ? GO:0005509 ... P27797 27840680
    372857 5lk5:F (2.3) BS01 CA ? GO:0005509 ... P27797 27840680
    372858 5lk5:G (2.3) BS01 CA ? GO:0005509 ... P27797 27840680
    372859 5lk5:H (2.3) BS01 CA ? GO:0005509 ... P27797 27840680
    372860 5lk5:I (2.3) BS01 CA ? GO:0005509 ... P27797 27840680
    372861 5lk5:J (2.3) BS01 CA ? GO:0005509 ... P27797 27840680
    372862 5lk9:A (1.12) BS01 HEM ? GO:0004601 ... Q9NAV7 N/A
    372863 5lk9:A (1.12) BS02 LZ1 ? GO:0004601 ... Q9NAV7 N/A
    372864 5lk9:B (1.12) BS01 HEM ? GO:0004601 ... Q9NAV7 N/A
    372865 5lk9:B (1.12) BS02 LZ1 ? GO:0004601 ... Q9NAV7 N/A
    372866 5lkc:A (1.81) BS01 FUC ? N/A A0A0E4B1P1 28505592
    372867 5lkc:B (1.81) BS01 FUC ? N/A A0A0E4B1P1 28505592
    372868 5lkd:A (1.68) BS01 GSH 1.8.5.1
    2.5.1.18
    GO:0004364 ... P36156 27736955
    372869 5lkd:B (1.68) BS01 GSH 1.8.5.1
    2.5.1.18
    GO:0004364 ... P36156 27736955
    372870 5lke:A (2.8) BS01 MYR ? GO:0005515 ... P02754 30174052
    372871 5lkf:A (2.5) BS01 MYR ? GO:0005515 ... P02754 30174052
    372872 5lkg:A (1.51) BS01 FUC ? N/A A0A0E4B1P1 28505592
    372873 5lkg:A (1.51) BS02 FUC ? N/A A0A0E4B1P1 28505592
    372874 5lkg:A (1.51) BS03 MG ? N/A A0A0E4B1P1 28505592
    372875 5lkg:B (1.51) BS01 FUC ? N/A A0A0E4B1P1 28505592
    372876 5lkj:A (2.595) BS01 6YB 2.1.1.319 GO:0016274 ... Q9WVG6 N/A
    372877 5lkj:A (2.595) BS02 DXE 2.1.1.319 GO:0016274 ... Q9WVG6 N/A
    372878 5lkj:B (2.595) BS01 6YB 2.1.1.319 GO:0016274 ... Q9WVG6 N/A
    372879 5lkj:C (2.595) BS01 6YB 2.1.1.319 GO:0016274 ... Q9WVG6 N/A
    372880 5lkj:D (2.595) BS01 6YB 2.1.1.319 GO:0016274 ... Q9WVG6 N/A
    372881 5lkk:A (1.49) BS01 FUC ? N/A A0A0E4B1P1 N/A
    372882 5lkk:A (1.49) BS02 FUC ? N/A A0A0E4B1P1 N/A
    372883 5lkk:B (1.49) BS01 FUC ? N/A A0A0E4B1P1 N/A
    372884 5lkk:B (1.49) BS02 FUC ? N/A A0A0E4B1P1 N/A
    372885 5lkk:B (1.49) BS03 MG ? N/A A0A0E4B1P1 N/A
    372886 5lkm:A (3.5) BS01 TYD 3.6.4.- GO:0000725 ... Q8DRP0 28561029
    372887 5lkm:A (3.5) BS02 MG 3.6.4.- GO:0000725 ... Q8DRP0 28561029
    372888 5lkm:B (3.5) BS01 TYD 3.6.4.- GO:0000725 ... Q8DRP0 28561029
    372889 5lkm:B (3.5) BS02 MG 3.6.4.- GO:0000725 ... Q8DRP0 28561029
    372890 5lkm:C (3.5) BS01 TYD 3.6.4.- GO:0000725 ... Q8DRP0 28561029
    372891 5lkm:C (3.5) BS02 MG 3.6.4.- GO:0000725 ... Q8DRP0 28561029
    372892 5lkr:A (2.52) BS01 FUC 3.1.1.8 GO:0001540 ... P06276 27908752
    372893 5lkr:A (2.52) BS02 6YC 3.1.1.8 GO:0001540 ... P06276 27908752 BindingDB: IC50=3306nM
    372894 5lkr:B (2.52) BS01 6YC 3.1.1.8 GO:0001540 ... P06276 27908752 BindingDB: IC50=3306nM
    372895 5lks:LA (3.6) BS01 rna ? GO:0002181 ... P62917 27665925
    372896 5lks:LB (3.6) BS01 rna ? GO:0002181 ... P39023 27665925
    372897 5lks:LC (3.6) BS01 rna ? GO:0002181 ... P36578 27665925
    372898 5lks:LC (3.6) BS02 rna ? GO:0002181 ... P36578 27665925
    372899 5lks:LD (3.6) BS01 rna ? GO:0000027 ... P46777 27665925
    372900 5lks:LD (3.6) BS02 rna ? GO:0000027 ... P46777 27665925
    372901 5lks:LE (3.6) BS01 rna ? GO:0002181 ... Q02878 27665925
    372902 5lks:LF (3.6) BS01 rna ? GO:0000463 ... P18124 27665925
    372903 5lks:LF (3.6) BS02 rna ? GO:0000463 ... P18124 27665925
    372904 5lks:LG (3.6) BS01 rna ? GO:0000470 ... P62424 27665925
    372905 5lks:LG (3.6) BS02 rna ? GO:0000470 ... P62424 27665925
    372906 5lks:LH (3.6) BS01 rna ? GO:0002181 ... P32969 27665925
    372907 5lks:LI (3.6) BS01 rna ? GO:0000027 ... Q96L21 27665925
    372908 5lks:LI (3.6) BS02 rna ? GO:0000027 ... Q96L21 27665925
    372909 5lks:LJ (3.6) BS01 rna ? GO:0000027 ... P62913 27665925
    372910 5lks:LJ (3.6) BS02 rna ? GO:0000027 ... P62913 27665925
    372911 5lks:LL (3.6) BS01 rna ? GO:0001824 ... P26373 27665925
    372912 5lks:LL (3.6) BS02 rna ? GO:0001824 ... P26373 27665925
    372913 5lks:LM (3.6) BS01 rna ? GO:0002181 ... P50914 27665925
    372914 5lks:LN (3.6) BS01 rna ? GO:0002181 ... P61313 27665925
    372915 5lks:LN (3.6) BS02 rna ? GO:0002181 ... P61313 27665925
    372916 5lks:LO (3.6) BS01 rna ? GO:0002181 ... P40429 27665925
    372917 5lks:LP (3.6) BS01 rna ? GO:0002181 ... P18621 27665925
    372918 5lks:LP (3.6) BS02 rna ? GO:0002181 ... P18621 27665925
    372919 5lks:LP (3.6) BS03 MG ? GO:0002181 ... P18621 27665925
    372920 5lks:LQ (3.6) BS01 rna ? GO:0002181 ... Q07020 27665925
    372921 5lks:LR (3.6) BS01 rna ? GO:0002181 ... P84098 27665925
    372922 5lks:LR (3.6) BS02 rna ? GO:0002181 ... P84098 27665925
    372923 5lks:LS (3.6) BS01 rna ? GO:0002181 ... Q02543 27665925
    372924 5lks:LS (3.6) BS02 rna ? GO:0002181 ... Q02543 27665925
    372925 5lks:LT (3.6) BS01 rna ? GO:0002181 ... P46778 27665925
    372926 5lks:LT (3.6) BS02 rna ? GO:0002181 ... P46778 27665925
    372927 5lks:LU (3.6) BS01 rna ? GO:0002181 ... P35268 27665925
    372928 5lks:LV (3.6) BS01 rna ? GO:0000122 ... P62829 27665925
    372929 5lks:LW (3.6) BS01 rna ? GO:0000027 ... P83731 27665925
    372930 5lks:LW (3.6) BS02 rna ? GO:0000027 ... P83731 27665925
    372931 5lks:LX (3.6) BS01 rna ? GO:0002181 ... P62750 27665925
    372932 5lks:LX (3.6) BS02 rna ? GO:0002181 ... P62750 27665925
    372933 5lks:LY (3.6) BS01 rna ? GO:0002181 ... P61254 27665925
    372934 5lks:LY (3.6) BS02 rna ? GO:0002181 ... P61254 27665925
    372935 5lks:LZ (3.6) BS01 rna ? GO:0002181 ... P61353 27665925
    372936 5lks:La (3.6) BS01 rna ? GO:0002181 ... P46776 27665925
    372937 5lks:Lb (3.6) BS01 rna N/A GO:0003735 ... N/A 27665925
    372938 5lks:Lc (3.6) BS01 rna ? GO:0002181 ... P62888 27665925
    372939 5lks:Ld (3.6) BS01 rna ? GO:0002181 ... P62899 27665925
    372940 5lks:Le (3.6) BS01 rna ? GO:0002181 ... P62910 27665925
    372941 5lks:Lf (3.6) BS01 rna ? GO:0000049 ... P18077 27665925
    372942 5lks:Lg (3.6) BS01 rna ? GO:0002181 ... P49207 27665925
    372943 5lks:Lg (3.6) BS02 ZN ? GO:0002181 ... P49207 27665925
    372944 5lks:Lh (3.6) BS01 rna ? GO:0000463 ... P42766 27665925
    372945 5lks:Lh (3.6) BS02 rna ? GO:0000463 ... P42766 27665925
    372946 5lks:Li (3.6) BS01 rna ? GO:0002181 ... Q9Y3U8 27665925
    372947 5lks:Lj (3.6) BS01 rna ? GO:0002181 ... P61927 27665925
    372948 5lks:Lj (3.6) BS02 rna ? GO:0002181 ... P61927 27665925
    372949 5lks:Lj (3.6) BS03 ZN ? GO:0002181 ... P61927 27665925
    372950 5lks:Lk (3.6) BS01 rna ? GO:0001501 ... P63173 27665925
    372951 5lks:Ll (3.6) BS01 rna ? GO:0002181 ... P62891 27665925
    372952 5lks:Ll (3.6) BS02 rna ? GO:0002181 ... P62891 27665925
    372953 5lks:Lm (3.6) BS01 rna ? GO:0002181 ... P62987 27665925
    372954 5lks:Lm (3.6) BS02 ZN ? GO:0002181 ... P62987 27665925
    372955 5lks:Lo (3.6) BS01 rna ? GO:0002181 ... P83881 27665925
    372956 5lks:Lo (3.6) BS02 ZN ? GO:0002181 ... P83881 27665925
    372957 5lks:Lp (3.6) BS01 rna ? GO:0002181 ... P61513 27665925
    372958 5lks:Lp (3.6) BS02 ZN ? GO:0002181 ... P61513 27665925
    372959 5lks:Lr (3.6) BS01 rna ? GO:0002181 ... P46779 27665925
    372960 5lks:Lz (3.6) BS01 rna ? GO:0002181 ... P62906 27665925
    372961 5lks:SA (3.6) BS01 rna ? GO:0000028 ... P08865 27665925
    372962 5lks:SB (3.6) BS01 rna ? GO:0002181 ... P61247 27665925
    372963 5lks:SC (3.6) BS01 rna ? GO:0002181 ... P15880 27665925
    372964 5lks:SD (3.6) BS01 rna 4.2.99.18 GO:0000977 ... P23396 27665925
    372965 5lks:SE (3.6) BS01 rna ? GO:0002181 ... P62701 27665925
    372966 5lks:SF (3.6) BS01 rna ? GO:0000028 ... P46782 27665925
    372967 5lks:SG (3.6) BS01 rna ? GO:0000082 ... P62753 27665925
    372968 5lks:SH (3.6) BS01 rna ? GO:0001843 ... P62081 27665925
    372969 5lks:SI (3.6) BS01 rna ? GO:0000462 ... P62241 27665925
    372970 5lks:SI (3.6) BS02 rna ? GO:0000462 ... P62241 27665925
    372971 5lks:SJ (3.6) BS01 rna ? GO:0002181 ... P46781 27665925
    372972 5lks:SK (3.6) BS01 rna ? GO:0002181 ... P46783 27665925
    372973 5lks:SL (3.6) BS01 rna ? GO:0002181 ... P62280 27665925
    372974 5lks:SM (3.6) BS01 rna ? GO:0002181 ... P25398 27665925
    372975 5lks:SN (3.6) BS01 rna ? GO:0002181 ... P62277 27665925
    372976 5lks:SN (3.6) BS02 rna ? GO:0002181 ... P62277 27665925
    372977 5lks:SO (3.6) BS01 rna ? GO:0000028 ... P62263 27665925
    372978 5lks:SP (3.6) BS01 rna ? GO:0000028 ... P62841 27665925
    372979 5lks:SQ (3.6) BS01 rna ? GO:0000462 ... P62249 27665925
    372980 5lks:SR (3.6) BS01 rna ? GO:0002181 ... P08708 27665925
    372981 5lks:SS (3.6) BS01 rna ? GO:0002181 ... P62269 27665925
    372982 5lks:ST (3.6) BS01 rna ? GO:0000028 ... P39019 27665925
    372983 5lks:SU (3.6) BS01 rna ? GO:0002181 ... P60866 27665925
    372984 5lks:SW (3.6) BS01 rna ? GO:0002181 ... P62244 27665925
    372985 5lks:SX (3.6) BS01 rna ? GO:0002181 ... P62266 27665925
    372986 5lks:SY (3.6) BS01 rna ? GO:0002181 ... P62847 27665925
    372987 5lks:SZ (3.6) BS01 rna ? GO:0002181 ... P62851 27665925
    372988 5lks:Sa (3.6) BS01 rna ? GO:0002181 ... P62854 27665925
    372989 5lks:Sa (3.6) BS02 ZN ? GO:0002181 ... P62854 27665925
    372990 5lks:Sb (3.6) BS01 rna ? GO:0000028 ... P42677 27665925
    372991 5lks:Sc (3.6) BS01 rna ? GO:0000028 ... P62857 27665925
    372992 5lks:Sd (3.6) BS01 rna ? GO:0002181 ... P62273 27665925
    372993 5lks:Sd (3.6) BS02 ZN ? GO:0002181 ... P62273 27665925
    372994 5lks:Se (3.6) BS01 rna N/A GO:0003735 ... N/A 27665925
    372995 5lks:Sf (3.6) BS01 rna ? GO:0002181 ... P62979 27665925
    372996 5lks:Sg (3.6) BS01 rna ? GO:0001891 ... P63244 27665925
    372997 5lkt:A (2.04) BS01 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q09472 27820805
    372998 5lkt:A (2.04) BS02 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q09472 27820805
    372999 5lkt:A (2.04) BS03 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q09472 27820805
    373000 5lkt:A (2.04) BS04 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q09472 27820805

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).