SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 1857 1858 1859 1860 1861 1862 1863 1864 1865 1866 1867 1868 1869 1870 1871 1872 1873 1874 1875 1876 1877 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    373201 5lmd:A (1.7) BS02 RC4 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 27722534
    373202 5lme:A (-1.00) BS01 ZN ? N/A Q27026 29385532
    373203 5lme:A (-1.00) BS02 ZN ? N/A Q27026 29385532
    373204 5lmf:A (2.15) BS01 peptide ? GO:0000290 ... P25644 29078363
    373205 5lmf:B (2.15) BS01 peptide ? GO:0000290 ... P25644 29078363
    373206 5lmg:A (1.89) BS01 peptide ? GO:0000290 ... P25644 29078363
    373207 5lmg:B (1.89) BS01 peptide ? GO:0000290 ... P25644 29078363
    373208 5lmk:A (2.4) BS01 6ZK 2.7.11.22 GO:0000082 ... P24941 28039837 BindingDB: IC50=37nM
    373209 5lmk:B (2.4) BS01 MG ? GO:0016538 ... P20248 28039837
    373210 5lmk:C (2.4) BS01 6ZK 2.7.11.22 GO:0000082 ... P24941 28039837 BindingDB: IC50=37nM
    373211 5lmm:L (1.2) BS01 FCO 1.12.99.6 GO:0005515 ... P0ACD8 N/A
    373212 5lmm:L (1.2) BS02 MG 1.12.99.6 GO:0005515 ... P0ACD8 N/A
    373213 5lmm:M (1.2) BS01 FCO 1.12.99.6 GO:0005515 ... P0ACD8 N/A
    373214 5lmm:M (1.2) BS02 MG 1.12.99.6 GO:0005515 ... P0ACD8 N/A
    373215 5lmm:S (1.2) BS01 SF4 1.12.99.6 GO:0005515 ... P69739 N/A
    373216 5lmm:S (1.2) BS02 F3S 1.12.99.6 GO:0005515 ... P69739 N/A
    373217 5lmm:S (1.2) BS03 SF3 1.12.99.6 GO:0005515 ... P69739 N/A
    373218 5lmm:T (1.2) BS01 SF4 1.12.99.6 GO:0005515 ... P69739 N/A
    373219 5lmm:T (1.2) BS02 F3S 1.12.99.6 GO:0005515 ... P69739 N/A
    373220 5lmm:T (1.2) BS03 SF3 1.12.99.6 GO:0005515 ... P69739 N/A
    373221 5lmn:B (3.55) BS01 rna ? GO:0003735 ... P80371 27662086
    373222 5lmn:C (3.55) BS01 rna ? GO:0003676 ... P80372 27662086
    373223 5lmn:D (3.55) BS01 rna ? GO:0003723 ... P80373 27662086
    373224 5lmn:D (3.55) BS02 ZN ? GO:0003723 ... P80373 27662086
    373225 5lmn:E (3.55) BS01 rna ? GO:0003723 ... Q5SHQ5 27662086
    373226 5lmn:F (3.55) BS01 rna ? GO:0003735 ... Q5SLP8 27662086
    373227 5lmn:G (3.55) BS01 rna ? GO:0000049 ... P17291 27662086
    373228 5lmn:G (3.55) BS02 rna ? GO:0000049 ... P17291 27662086
    373229 5lmn:H (3.55) BS01 rna ? GO:0003735 ... P0DOY9 27662086
    373230 5lmn:I (3.55) BS01 rna ? GO:0000049 ... P80374 27662086
    373231 5lmn:J (3.55) BS01 rna ? GO:0000049 ... Q5SHN7 27662086
    373232 5lmn:K (3.55) BS01 rna ? GO:0003735 ... P80376 27662086
    373233 5lmn:K (3.55) BS02 rna ? GO:0003735 ... P80376 27662086
    373234 5lmn:L (3.55) BS01 rna ? GO:0000049 ... Q5SHN3 27662086
    373235 5lmn:M (3.55) BS01 rna ? GO:0000049 ... P80377 27662086
    373236 5lmn:N (3.55) BS01 rna ? GO:0003735 ... P0DOY6 27662086
    373237 5lmn:N (3.55) BS02 ZN ? GO:0003735 ... P0DOY6 27662086
    373238 5lmn:O (3.55) BS01 rna ? GO:0003735 ... Q5SJ76 27662086
    373239 5lmn:P (3.55) BS01 rna ? GO:0003735 ... Q5SJH3 27662086
    373240 5lmn:Q (3.55) BS01 rna ? GO:0003735 ... P0DOY7 27662086
    373241 5lmn:R (3.55) BS01 rna ? GO:0003735 ... Q5SLQ0 27662086
    373242 5lmn:S (3.55) BS01 rna ? GO:0000028 ... Q5SHP2 27662086
    373243 5lmn:T (3.55) BS01 rna ? GO:0003723 ... P80380 27662086
    373244 5lmn:W (3.55) BS01 rna ? GO:0003723 ... Q5SHR1 27662086
    373245 5lmn:X (3.55) BS01 rna ? GO:0003743 ... Q5SKU2 27662086
    373246 5lmn:X (3.55) BS02 rna ? GO:0003743 ... Q5SKU2 27662086
    373247 5lmo:B (4.3) BS01 rna ? GO:0003735 ... P80371 27662086
    373248 5lmo:C (4.3) BS01 rna ? GO:0003676 ... P80372 27662086
    373249 5lmo:D (4.3) BS01 rna ? GO:0003723 ... P80373 27662086
    373250 5lmo:D (4.3) BS02 ZN ? GO:0003723 ... P80373 27662086
    373251 5lmo:E (4.3) BS01 rna ? GO:0003723 ... Q5SHQ5 27662086
    373252 5lmo:F (4.3) BS01 rna ? GO:0003735 ... Q5SLP8 27662086
    373253 5lmo:G (4.3) BS01 rna ? GO:0000049 ... P17291 27662086
    373254 5lmo:H (4.3) BS01 rna ? GO:0003735 ... P0DOY9 27662086
    373255 5lmo:I (4.3) BS01 rna ? GO:0000049 ... P80374 27662086
    373256 5lmo:J (4.3) BS01 rna ? GO:0000049 ... Q5SHN7 27662086
    373257 5lmo:K (4.3) BS01 rna ? GO:0003735 ... P80376 27662086
    373258 5lmo:L (4.3) BS01 rna ? GO:0000049 ... Q5SHN3 27662086
    373259 5lmo:M (4.3) BS01 rna ? GO:0000049 ... P80377 27662086
    373260 5lmo:N (4.3) BS01 rna ? GO:0003735 ... P0DOY6 27662086
    373261 5lmo:N (4.3) BS02 ZN ? GO:0003735 ... P0DOY6 27662086
    373262 5lmo:O (4.3) BS01 rna ? GO:0003735 ... Q5SJ76 27662086
    373263 5lmo:P (4.3) BS01 rna ? GO:0003735 ... Q5SJH3 27662086
    373264 5lmo:Q (4.3) BS01 rna ? GO:0003735 ... P0DOY7 27662086
    373265 5lmo:R (4.3) BS01 rna ? GO:0003735 ... Q5SLQ0 27662086
    373266 5lmo:S (4.3) BS01 rna ? GO:0000028 ... Q5SHP2 27662086
    373267 5lmo:T (4.3) BS01 rna ? GO:0003723 ... P80380 27662086
    373268 5lmo:W (4.3) BS01 rna ? GO:0003723 ... Q5SHR1 27662086
    373269 5lmo:X (4.3) BS01 rna ? GO:0003743 ... Q5SKU2 27662086
    373270 5lmp:B (5.35) BS01 rna ? GO:0003735 ... P80371 27662086
    373271 5lmp:C (5.35) BS01 rna ? GO:0003676 ... P80372 27662086
    373272 5lmp:D (5.35) BS01 rna ? GO:0003723 ... P80373 27662086
    373273 5lmp:D (5.35) BS02 ZN ? GO:0003723 ... P80373 27662086
    373274 5lmp:E (5.35) BS01 rna ? GO:0003723 ... Q5SHQ5 27662086
    373275 5lmp:F (5.35) BS01 rna ? GO:0003735 ... Q5SLP8 27662086
    373276 5lmp:G (5.35) BS01 rna ? GO:0000049 ... P17291 27662086
    373277 5lmp:H (5.35) BS01 rna ? GO:0003735 ... P0DOY9 27662086
    373278 5lmp:I (5.35) BS01 rna ? GO:0000049 ... P80374 27662086
    373279 5lmp:J (5.35) BS01 rna ? GO:0000049 ... Q5SHN7 27662086
    373280 5lmp:K (5.35) BS01 rna ? GO:0003735 ... P80376 27662086
    373281 5lmp:K (5.35) BS02 rna ? GO:0003735 ... P80376 27662086
    373282 5lmp:L (5.35) BS01 rna ? GO:0000049 ... Q5SHN3 27662086
    373283 5lmp:M (5.35) BS01 rna ? GO:0000049 ... P80377 27662086
    373284 5lmp:N (5.35) BS01 rna ? GO:0003735 ... P0DOY6 27662086
    373285 5lmp:N (5.35) BS02 ZN ? GO:0003735 ... P0DOY6 27662086
    373286 5lmp:O (5.35) BS01 rna ? GO:0003735 ... Q5SJ76 27662086
    373287 5lmp:P (5.35) BS01 rna ? GO:0003735 ... Q5SJH3 27662086
    373288 5lmp:Q (5.35) BS01 rna ? GO:0003735 ... P0DOY7 27662086
    373289 5lmp:R (5.35) BS01 rna ? GO:0003735 ... Q5SLQ0 27662086
    373290 5lmp:S (5.35) BS01 rna ? GO:0000028 ... Q5SHP2 27662086
    373291 5lmp:T (5.35) BS01 rna ? GO:0003723 ... P80380 27662086
    373292 5lmp:W (5.35) BS01 rna ? GO:0003723 ... Q5SHR1 27662086
    373293 5lmp:X (5.35) BS01 rna ? GO:0003743 ... Q5SKU2 27662086
    373294 5lmp:X (5.35) BS02 rna ? GO:0003743 ... Q5SKU2 27662086
    373295 5lmq:B (4.2) BS01 rna ? GO:0003735 ... P80371 27662086
    373296 5lmq:C (4.2) BS01 rna ? GO:0003676 ... P80372 27662086
    373297 5lmq:D (4.2) BS01 rna ? GO:0003723 ... P80373 27662086
    373298 5lmq:D (4.2) BS02 ZN ? GO:0003723 ... P80373 27662086
    373299 5lmq:E (4.2) BS01 rna ? GO:0003723 ... Q5SHQ5 27662086
    373300 5lmq:F (4.2) BS01 rna ? GO:0003735 ... Q5SLP8 27662086
    373301 5lmq:G (4.2) BS01 rna ? GO:0000049 ... P17291 27662086
    373302 5lmq:G (4.2) BS02 rna ? GO:0000049 ... P17291 27662086
    373303 5lmq:H (4.2) BS01 rna ? GO:0003735 ... P0DOY9 27662086
    373304 5lmq:I (4.2) BS01 rna ? GO:0000049 ... P80374 27662086
    373305 5lmq:J (4.2) BS01 rna ? GO:0000049 ... Q5SHN7 27662086
    373306 5lmq:K (4.2) BS01 rna ? GO:0003735 ... P80376 27662086
    373307 5lmq:L (4.2) BS01 rna ? GO:0000049 ... Q5SHN3 27662086
    373308 5lmq:M (4.2) BS01 rna ? GO:0000049 ... P80377 27662086
    373309 5lmq:M (4.2) BS02 rna ? GO:0000049 ... P80377 27662086
    373310 5lmq:N (4.2) BS01 rna ? GO:0003735 ... P0DOY6 27662086
    373311 5lmq:N (4.2) BS02 ZN ? GO:0003735 ... P0DOY6 27662086
    373312 5lmq:O (4.2) BS01 rna ? GO:0003735 ... Q5SJ76 27662086
    373313 5lmq:P (4.2) BS01 rna ? GO:0003735 ... Q5SJH3 27662086
    373314 5lmq:Q (4.2) BS01 rna ? GO:0003735 ... P0DOY7 27662086
    373315 5lmq:R (4.2) BS01 rna ? GO:0003735 ... Q5SLQ0 27662086
    373316 5lmq:S (4.2) BS01 rna ? GO:0000028 ... Q5SHP2 27662086
    373317 5lmq:T (4.2) BS01 rna ? GO:0003723 ... P80380 27662086
    373318 5lmq:W (4.2) BS01 rna ? GO:0003723 ... Q5SHR1 27662086
    373319 5lmq:X (4.2) BS01 rna ? GO:0003743 ... Q5SKU2 27662086
    373320 5lmq:X (4.2) BS02 rna ? GO:0003743 ... Q5SKU2 27662086
    373321 5lmr:B (4.45) BS01 rna ? GO:0003735 ... P80371 27662086
    373322 5lmr:C (4.45) BS01 rna ? GO:0003676 ... P80372 27662086
    373323 5lmr:D (4.45) BS01 rna ? GO:0003723 ... P80373 27662086
    373324 5lmr:D (4.45) BS02 ZN ? GO:0003723 ... P80373 27662086
    373325 5lmr:E (4.45) BS01 rna ? GO:0003723 ... Q5SHQ5 27662086
    373326 5lmr:F (4.45) BS01 rna ? GO:0003735 ... Q5SLP8 27662086
    373327 5lmr:G (4.45) BS01 rna ? GO:0000049 ... P17291 27662086
    373328 5lmr:H (4.45) BS01 rna ? GO:0003735 ... P0DOY9 27662086
    373329 5lmr:I (4.45) BS01 rna ? GO:0000049 ... P80374 27662086
    373330 5lmr:J (4.45) BS01 rna ? GO:0000049 ... Q5SHN7 27662086
    373331 5lmr:K (4.45) BS01 rna ? GO:0003735 ... P80376 27662086
    373332 5lmr:L (4.45) BS01 rna ? GO:0000049 ... Q5SHN3 27662086
    373333 5lmr:M (4.45) BS01 rna ? GO:0000049 ... P80377 27662086
    373334 5lmr:M (4.45) BS02 rna ? GO:0000049 ... P80377 27662086
    373335 5lmr:N (4.45) BS01 rna ? GO:0003735 ... P0DOY6 27662086
    373336 5lmr:N (4.45) BS02 ZN ? GO:0003735 ... P0DOY6 27662086
    373337 5lmr:O (4.45) BS01 rna ? GO:0003735 ... Q5SJ76 27662086
    373338 5lmr:P (4.45) BS01 rna ? GO:0003735 ... Q5SJH3 27662086
    373339 5lmr:Q (4.45) BS01 rna ? GO:0003735 ... P0DOY7 27662086
    373340 5lmr:R (4.45) BS01 rna ? GO:0003735 ... Q5SLQ0 27662086
    373341 5lmr:R (4.45) BS02 rna ? GO:0003735 ... Q5SLQ0 27662086
    373342 5lmr:S (4.45) BS01 rna ? GO:0000028 ... Q5SHP2 27662086
    373343 5lmr:T (4.45) BS01 rna ? GO:0003723 ... P80380 27662086
    373344 5lmr:W (4.45) BS01 rna ? GO:0003723 ... Q5SHR1 27662086
    373345 5lmr:X (4.45) BS01 rna ? GO:0003743 ... Q5SKU2 27662086
    373346 5lmr:X (4.45) BS02 rna ? GO:0003743 ... Q5SKU2 27662086
    373347 5lms:B (5.1) BS01 rna ? GO:0003735 ... P80371 27662086
    373348 5lms:C (5.1) BS01 rna ? GO:0003676 ... P80372 27662086
    373349 5lms:D (5.1) BS01 rna ? GO:0003723 ... P80373 27662086
    373350 5lms:D (5.1) BS02 ZN ? GO:0003723 ... P80373 27662086
    373351 5lms:E (5.1) BS01 rna ? GO:0003723 ... Q5SHQ5 27662086
    373352 5lms:F (5.1) BS01 rna ? GO:0003735 ... Q5SLP8 27662086
    373353 5lms:G (5.1) BS01 rna ? GO:0000049 ... P17291 27662086
    373354 5lms:G (5.1) BS02 rna ? GO:0000049 ... P17291 27662086
    373355 5lms:H (5.1) BS01 rna ? GO:0003735 ... P0DOY9 27662086
    373356 5lms:I (5.1) BS01 rna ? GO:0000049 ... P80374 27662086
    373357 5lms:J (5.1) BS01 rna ? GO:0000049 ... Q5SHN7 27662086
    373358 5lms:K (5.1) BS01 rna ? GO:0003735 ... P80376 27662086
    373359 5lms:L (5.1) BS01 rna ? GO:0000049 ... Q5SHN3 27662086
    373360 5lms:M (5.1) BS01 rna ? GO:0000049 ... P80377 27662086
    373361 5lms:N (5.1) BS01 rna ? GO:0003735 ... P0DOY6 27662086
    373362 5lms:N (5.1) BS02 ZN ? GO:0003735 ... P0DOY6 27662086
    373363 5lms:O (5.1) BS01 rna ? GO:0003735 ... Q5SJ76 27662086
    373364 5lms:P (5.1) BS01 rna ? GO:0003735 ... Q5SJH3 27662086
    373365 5lms:Q (5.1) BS01 rna ? GO:0003735 ... P0DOY7 27662086
    373366 5lms:R (5.1) BS01 rna ? GO:0003735 ... Q5SLQ0 27662086
    373367 5lms:S (5.1) BS01 rna ? GO:0000028 ... Q5SHP2 27662086
    373368 5lms:T (5.1) BS01 rna ? GO:0003723 ... P80380 27662086
    373369 5lms:W (5.1) BS01 rna ? GO:0003723 ... Q5SHR1 27662086
    373370 5lms:X (5.1) BS01 rna ? GO:0003743 ... Q5SKU2 27662086
    373371 5lms:X (5.1) BS02 rna ? GO:0003743 ... Q5SKU2 27662086
    373372 5lmt:B (4.15) BS01 rna ? GO:0003735 ... P80371 27662086
    373373 5lmt:C (4.15) BS01 rna ? GO:0003676 ... P80372 27662086
    373374 5lmt:D (4.15) BS01 rna ? GO:0003723 ... P80373 27662086
    373375 5lmt:D (4.15) BS02 ZN ? GO:0003723 ... P80373 27662086
    373376 5lmt:E (4.15) BS01 rna ? GO:0003723 ... Q5SHQ5 27662086
    373377 5lmt:F (4.15) BS01 rna ? GO:0003735 ... Q5SLP8 27662086
    373378 5lmt:G (4.15) BS01 rna ? GO:0000049 ... P17291 27662086
    373379 5lmt:G (4.15) BS02 rna ? GO:0000049 ... P17291 27662086
    373380 5lmt:H (4.15) BS01 rna ? GO:0003735 ... P0DOY9 27662086
    373381 5lmt:I (4.15) BS01 rna ? GO:0000049 ... P80374 27662086
    373382 5lmt:J (4.15) BS01 rna ? GO:0000049 ... Q5SHN7 27662086
    373383 5lmt:K (4.15) BS01 rna ? GO:0003735 ... P80376 27662086
    373384 5lmt:K (4.15) BS02 rna ? GO:0003735 ... P80376 27662086
    373385 5lmt:L (4.15) BS01 rna ? GO:0000049 ... Q5SHN3 27662086
    373386 5lmt:M (4.15) BS01 rna ? GO:0000049 ... P80377 27662086
    373387 5lmt:N (4.15) BS01 rna ? GO:0003735 ... P0DOY6 27662086
    373388 5lmt:N (4.15) BS02 ZN ? GO:0003735 ... P0DOY6 27662086
    373389 5lmt:O (4.15) BS01 rna ? GO:0003735 ... Q5SJ76 27662086
    373390 5lmt:P (4.15) BS01 rna ? GO:0003735 ... Q5SJH3 27662086
    373391 5lmt:Q (4.15) BS01 rna ? GO:0003735 ... P0DOY7 27662086
    373392 5lmt:R (4.15) BS01 rna ? GO:0003735 ... Q5SLQ0 27662086
    373393 5lmt:S (4.15) BS01 rna ? GO:0000028 ... Q5SHP2 27662086
    373394 5lmt:T (4.15) BS01 rna ? GO:0003723 ... P80380 27662086
    373395 5lmt:W (4.15) BS01 rna ? GO:0003723 ... Q5SHR1 27662086
    373396 5lmt:X (4.15) BS01 rna ? GO:0003743 ... Q5SKU2 27662086
    373397 5lmt:X (4.15) BS02 rna ? GO:0003743 ... Q5SKU2 27662086
    373398 5lmu:B (4.0) BS01 rna ? GO:0003735 ... P80371 27662086
    373399 5lmu:C (4.0) BS01 rna ? GO:0003676 ... P80372 27662086
    373400 5lmu:D (4.0) BS01 rna ? GO:0003723 ... P80373 27662086

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).