SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    373601 5loh:A (3.1) BS01 STU 2.7.11.1 GO:0004672 ... Q96GX5 27563826
    373602 5loh:B (3.1) BS01 STU 2.7.11.1 GO:0004672 ... Q96GX5 27563826
    373603 5lok:A (1.109) BS01 CTN 2.4.2.3 GO:0003824 ... Q9K4U1 N/A
    373604 5lok:A (1.109) BS02 CYT 2.4.2.3 GO:0003824 ... Q9K4U1 N/A
    373605 5lok:B (1.109) BS01 CTN 2.4.2.3 GO:0003824 ... Q9K4U1 N/A
    373606 5lok:B (1.109) BS02 CYT 2.4.2.3 GO:0003824 ... Q9K4U1 N/A
    373607 5lok:C (1.109) BS01 CTN 2.4.2.3 GO:0003824 ... Q9K4U1 N/A
    373608 5lok:C (1.109) BS02 CYT 2.4.2.3 GO:0003824 ... Q9K4U1 N/A
    373609 5lok:D (1.109) BS01 CTN 2.4.2.3 GO:0003824 ... Q9K4U1 N/A
    373610 5lok:D (1.109) BS02 CYT 2.4.2.3 GO:0003824 ... Q9K4U1 N/A
    373611 5lok:E (1.109) BS01 CTN 2.4.2.3 GO:0003824 ... Q9K4U1 N/A
    373612 5lok:E (1.109) BS02 CYT 2.4.2.3 GO:0003824 ... Q9K4U1 N/A
    373613 5lok:F (1.109) BS01 CTN 2.4.2.3 GO:0003824 ... Q9K4U1 N/A
    373614 5lok:F (1.109) BS02 CYT 2.4.2.3 GO:0003824 ... Q9K4U1 N/A
    373615 5lol:A (2.3) BS01 GSH 1.8.5.1
    2.5.1.18
    GO:0004364 ... Q9FRL8 28195196
    373616 5lom:A (1.5) BS01 SNW ? GO:0015276 ... Q7D447 27609514
    373617 5lom:B (1.5) BS01 SNW ? GO:0015276 ... Q7D447 27609514
    373618 5lop:A (3.5) BS01 MG ? GO:0000184 ... Q6CIU1 27694841
    373619 5lop:A (3.5) BS02 MG ? GO:0000184 ... Q6CIU1 27694841
    373620 5lop:A (3.5) BS03 M7G ? GO:0000184 ... Q6CIU1 27694841
    373621 5loq:A (1.69) BS01 FEC 1.3.98.5 GO:0004601 ... Q8Y5F1 27758026
    373622 5loq:B (1.69) BS01 FEC 1.3.98.5 GO:0004601 ... Q8Y5F1 27758026
    373623 5loq:C (1.69) BS01 FEC 1.3.98.5 GO:0004601 ... Q8Y5F1 27758026
    373624 5loq:D (1.69) BS01 FEC 1.3.98.5 GO:0004601 ... Q8Y5F1 27758026
    373625 5loq:E (1.69) BS01 FEC 1.3.98.5 GO:0004601 ... Q8Y5F1 27758026
    373626 5lor:A (2.192) BS01 UPG 3.6.1.45 GO:0005515 ... Q9BRQ3 N/A
    373627 5los:A (2.0) BS01 ZN ? GO:0046872 ... G4TKU4 32285459
    373628 5lot:A (2.25) BS01 ACO 2.3.1.176 GO:0003988 ... E9AW84 28062645
    373629 5lot:B (2.25) BS01 ACO 2.3.1.176 GO:0003988 ... E9AW84 28062645
    373630 5lot:D (2.25) BS01 ACO 2.3.1.176 GO:0003988 ... E9AW84 28062645
    373631 5lou:A (1.8) BS01 PO4 3.6.1.45 GO:0005515 ... Q9BRQ3 29413322
    373632 5lou:B (1.8) BS01 PO4 3.6.1.45 GO:0005515 ... Q9BRQ3 29413322
    373633 5lov:A (2.4) BS01 GTP 3.6.5.- GO:0000226 ... P81947 27856798
    373634 5lov:A (2.4) BS02 MG 3.6.5.- GO:0000226 ... P81947 27856798
    373635 5lov:A (2.4) BS03 CA 3.6.5.- GO:0000226 ... P81947 27856798
    373636 5lov:B (2.4) BS01 GDP ? GO:0000226 ... Q6B856 27856798
    373637 5lov:B (2.4) BS02 71E ? GO:0000226 ... Q6B856 27856798
    373638 5lov:C (2.4) BS01 GTP 3.6.5.- GO:0000226 ... P81947 27856798
    373639 5lov:C (2.4) BS02 71E 3.6.5.- GO:0000226 ... P81947 27856798
    373640 5lov:D (2.4) BS01 GDP ? GO:0000226 ... Q6B856 27856798
    373641 5lov:F (2.4) BS01 ACP N/A GO:0036211 ... N/A 27856798
    373642 5low:A (2.8) BS01 CA ? GO:0016020 ... P47709 28634303
    373643 5low:A (2.8) BS02 CA ? GO:0016020 ... P47709 28634303
    373644 5low:B (2.8) BS01 CA ? GO:0016020 ... P47709 28634303
    373645 5low:B (2.8) BS02 CA ? GO:0016020 ... P47709 28634303
    373646 5low:C (2.8) BS01 CA ? GO:0016020 ... P47709 28634303
    373647 5low:C (2.8) BS02 CA ? GO:0016020 ... P47709 28634303
    373648 5low:H (2.8) BS01 CA ? GO:0016020 ... P47709 28634303
    373649 5low:H (2.8) BS02 CA ? GO:0016020 ... P47709 28634303
    373650 5low:I (2.8) BS01 CA ? GO:0016020 ... P47709 28634303
    373651 5low:I (2.8) BS02 CA ? GO:0016020 ... P47709 28634303
    373652 5low:J (2.8) BS01 CA ? GO:0016020 ... P47709 28634303
    373653 5low:J (2.8) BS02 CA ? GO:0016020 ... P47709 28634303
    373654 5lp1:A (1.91) BS01 71H 3.1.1.47 GO:0003847 ... Q13093 28105273 MOAD: ic50=0.398nM
    373655 5lp6:A (2.9) BS01 GTP 3.6.5.- GO:0000226 ... P81947 27613098
    373656 5lp6:A (2.9) BS02 MG 3.6.5.- GO:0000226 ... P81947 27613098
    373657 5lp6:A (2.9) BS03 71P 3.6.5.- GO:0000226 ... P81947 27613098
    373658 5lp6:B (2.9) BS01 GDP ? GO:0000226 ... Q6B856 27613098
    373659 5lp6:B (2.9) BS02 71P ? GO:0000226 ... Q6B856 27613098
    373660 5lp6:C (2.9) BS01 GTP 3.6.5.- GO:0000226 ... P81947 27613098
    373661 5lp6:C (2.9) BS02 CA 3.6.5.- GO:0000226 ... P81947 27613098
    373662 5lp6:D (2.9) BS01 GDP ? GO:0000226 ... Q6B856 27613098
    373663 5lpa:A (1.4) BS01 ATP 2.7.7.47 GO:0005524 ... Q8ZPX9 29871922 MOAD: Kd=50uM
    373664 5lpa:A (1.4) BS02 71R 2.7.7.47 GO:0005524 ... Q8ZPX9 29871922 MOAD: Kd=11uM
    373665 5lpa:A (1.4) BS03 CA 2.7.7.47 GO:0005524 ... Q8ZPX9 29871922
    373666 5lpa:A (1.4) BS04 CA 2.7.7.47 GO:0005524 ... Q8ZPX9 29871922
    373667 5lpa:B (1.4) BS01 ATP 2.7.7.47 GO:0005524 ... Q8ZPX9 29871922 MOAD: Kd=50uM
    373668 5lpa:B (1.4) BS02 71R 2.7.7.47 GO:0005524 ... Q8ZPX9 29871922 MOAD: Kd=11uM
    373669 5lpa:B (1.4) BS03 CA 2.7.7.47 GO:0005524 ... Q8ZPX9 29871922
    373670 5lpa:B (1.4) BS04 CA 2.7.7.47 GO:0005524 ... Q8ZPX9 29871922
    373671 5lpb:A (1.98) BS01 ADP 2.7.10.1
    2.7.11.1
    GO:0004672 ... O22476 24461462
    373672 5lpd:H (1.5) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 31633354
    373673 5lpd:H (1.5) BS02 71U 3.4.21.5 GO:0004252 ... P00734 31633354 BindingDB: Ki=0.070000nM
    373674 5lpe:A (2.65) BS01 ZN 3.4.21.- GO:0004252 ... O43240 27611765
    373675 5lpe:B (2.65) BS01 ZN 3.4.21.- GO:0004252 ... O43240 27611765
    373676 5lpg:A (1.7) BS01 MG 3.6.1.9 GO:0000278 ... Q9NV35 27530327
    373677 5lpg:A (1.7) BS02 71V 3.6.1.9 GO:0000278 ... Q9NV35 27530327
    373678 5lpg:B (1.7) BS01 MG 3.6.1.9 GO:0000278 ... Q9NV35 27530327
    373679 5lpg:B (1.7) BS02 MG 3.6.1.9 GO:0000278 ... Q9NV35 27530327
    373680 5lpi:A (1.8) BS01 ZN ? N/A O60308 28017521
    373681 5lpi:A (1.8) BS02 ZN ? N/A O60308 28017521
    373682 5lpi:A (1.8) BS03 ZN ? N/A O60308 28017521
    373683 5lpi:A (1.8) BS04 ZN ? N/A O60308 28017521
    373684 5lpi:B (1.8) BS01 ZN ? N/A O60308 28017521
    373685 5lpi:B (1.8) BS02 ZN ? N/A O60308 28017521
    373686 5lpi:B (1.8) BS03 ZN ? N/A O60308 28017521
    373687 5lpi:B (1.8) BS04 ZN ? N/A O60308 28017521
    373688 5lpi:C (1.8) BS01 ZN ? N/A O60308 28017521
    373689 5lpi:C (1.8) BS02 ZN ? N/A O60308 28017521
    373690 5lpi:C (1.8) BS03 ZN ? N/A O60308 28017521
    373691 5lpi:C (1.8) BS04 ZN ? N/A O60308 28017521
    373692 5lpi:D (1.8) BS01 ZN ? N/A O60308 28017521
    373693 5lpi:D (1.8) BS02 ZN ? N/A O60308 28017521
    373694 5lpi:D (1.8) BS03 ZN ? N/A O60308 28017521
    373695 5lpi:D (1.8) BS04 ZN ? N/A O60308 28017521
    373696 5lpj:A (1.65) BS01 XDM 2.3.1.-
    2.3.1.48
    N/A Q92793 28766825 MOAD: Kd=10.1uM
    373697 5lpk:A (2.1) BS01 XDM 2.3.1.-
    2.3.1.48
    N/A Q09472 28766825 MOAD: Kd=3.06uM
    373698 5lpk:B (2.1) BS01 XDM 2.3.1.-
    2.3.1.48
    N/A Q09472 28766825 MOAD: Kd=3.06uM
    373699 5lpk:C (2.1) BS01 XDM 2.3.1.-
    2.3.1.48
    N/A Q09472 28766825 MOAD: Kd=3.06uM
    373700 5lpk:D (2.1) BS01 XDM 2.3.1.-
    2.3.1.48
    N/A Q09472 28766825 MOAD: Kd=3.06uM
    373701 5lpk:D (2.1) BS02 XDM 2.3.1.-
    2.3.1.48
    N/A Q09472 28766825 MOAD: Kd=3.06uM
    373702 5lpk:E (2.1) BS01 XDM 2.3.1.-
    2.3.1.48
    N/A Q09472 28766825 MOAD: Kd=3.06uM
    373703 5lpk:E (2.1) BS02 XDM 2.3.1.-
    2.3.1.48
    N/A Q09472 28766825 MOAD: Kd=3.06uM
    373704 5lpk:F (2.1) BS01 XDM 2.3.1.-
    2.3.1.48
    N/A Q09472 28766825 MOAD: Kd=3.06uM
    373705 5lpk:G (2.1) BS01 XDM 2.3.1.-
    2.3.1.48
    N/A Q09472 28766825
    373706 5lpl:A (1.65) BS01 71X 2.3.1.-
    2.3.1.48
    N/A Q92793 28766825 MOAD: Kd=12uM
    373707 5lpm:A (1.5) BS01 71Y 2.3.1.-
    2.3.1.48
    N/A Q09472 28766825 MOAD: Kd=2.77uM
    373708 5lpm:A (1.5) BS02 71Y 2.3.1.-
    2.3.1.48
    N/A Q09472 28766825 MOAD: Kd=2.77uM
    373709 5lpm:B (1.5) BS01 71Y 2.3.1.-
    2.3.1.48
    N/A Q09472 28766825 MOAD: Kd=2.77uM
    373710 5lpm:B (1.5) BS02 71Y 2.3.1.-
    2.3.1.48
    N/A Q09472 28766825 MOAD: Kd=2.77uM
    373711 5lpn:A (2.8) BS01 MG 3.6.5.2 GO:0003924 ... P61026 27552051
    373712 5lpn:A (2.8) BS02 GNP 3.6.5.2 GO:0003924 ... P61026 27552051
    373713 5lpn:C (2.8) BS01 MG 3.6.5.2 GO:0003924 ... P61026 27552051
    373714 5lpn:C (2.8) BS02 GNP 3.6.5.2 GO:0003924 ... P61026 27552051
    373715 5lpo:A (1.42) BS01 ZN 2.4.2.29 GO:0002099 ... P28720 N/A
    373716 5lpo:A (1.42) BS02 725 2.4.2.29 GO:0002099 ... P28720 N/A
    373717 5lpp:A (1.99) BS01 ZN 2.4.2.29 GO:0002099 ... P28720 N/A
    373718 5lpp:A (1.99) BS02 72C 2.4.2.29 GO:0002099 ... P28720 N/A
    373719 5lpq:A (2.52) BS01 ZN 2.4.2.29 GO:0002099 ... P28720 N/A
    373720 5lpq:A (2.52) BS02 72C 2.4.2.29 GO:0002099 ... P28720 N/A
    373721 5lpq:B (2.52) BS01 ZN 2.4.2.29 GO:0002099 ... P28720 N/A
    373722 5lpq:B (2.52) BS02 72C 2.4.2.29 GO:0002099 ... P28720 N/A
    373723 5lpr:A (2.13) BS01 peptide 3.4.21.12 GO:0004252 ... P00778 1931963
    373724 5lps:A (1.27) BS01 726 2.4.2.29 GO:0002099 ... P28720 N/A
    373725 5lps:A (1.27) BS02 ZN 2.4.2.29 GO:0002099 ... P28720 N/A
    373726 5lpt:A (2.36) BS01 ZN 2.4.2.29 GO:0002099 ... P28720 N/A
    373727 5lpt:A (2.36) BS02 726 2.4.2.29 GO:0002099 ... P28720 N/A
    373728 5lpt:B (2.36) BS01 ZN 2.4.2.29 GO:0002099 ... P28720 N/A
    373729 5lpt:B (2.36) BS02 726 2.4.2.29 GO:0002099 ... P28720 N/A
    373730 5lpu:A (2.1) BS01 CA ? GO:0001525 ... P07355 28669632
    373731 5lpu:A (2.1) BS02 CA ? GO:0001525 ... P07355 28669632
    373732 5lpu:A (2.1) BS03 CA ? GO:0001525 ... P07355 28669632
    373733 5lpu:A (2.1) BS04 CA ? GO:0001525 ... P07355 28669632
    373734 5lpu:A (2.1) BS05 CA ? GO:0001525 ... P07355 28669632
    373735 5lpu:B (2.1) BS01 CA ? GO:0001525 ... P07355 28669632
    373736 5lpu:B (2.1) BS02 CA ? GO:0001525 ... P07355 28669632
    373737 5lpu:B (2.1) BS03 CA ? GO:0001525 ... P07355 28669632
    373738 5lpu:B (2.1) BS04 CA ? GO:0001525 ... P07355 28669632
    373739 5lpu:B (2.1) BS05 CA ? GO:0001525 ... P07355 28669632
    373740 5lpu:C (2.1) BS01 CA ? GO:0001837 ... P26447 28669632
    373741 5lpu:C (2.1) BS02 CA ? GO:0001837 ... P26447 28669632
    373742 5lpu:D (2.1) BS01 CA ? GO:0001837 ... P26447 28669632
    373743 5lpu:D (2.1) BS02 CA ? GO:0001837 ... P26447 28669632
    373744 5lpv:A (2.7) BS01 ANP 2.7.10.1
    2.7.11.1
    GO:0004672 ... O22476 24461462
    373745 5lpv:A (2.7) BS02 MN 2.7.10.1
    2.7.11.1
    GO:0004672 ... O22476 24461462
    373746 5lpx:A (1.9) BS01 CA ? GO:0001525 ... P07355 28669632
    373747 5lpx:A (1.9) BS02 CA ? GO:0001525 ... P07355 28669632
    373748 5lpx:A (1.9) BS03 CA ? GO:0001525 ... P07355 28669632
    373749 5lpx:A (1.9) BS04 CA ? GO:0001525 ... P07355 28669632
    373750 5lpx:A (1.9) BS05 CA ? GO:0001525 ... P07355 28669632
    373751 5lpy:A (2.3) BS01 ATP 2.7.10.1
    2.7.11.1
    GO:0004672 ... O22476 N/A
    373752 5lpz:A (2.48) BS01 ADP 2.7.10.1
    2.7.11.1
    GO:0004672 ... O22476 24461462
    373753 5lq0:A (2.9) BS01 CA ? GO:0001525 ... P07355 28669632
    373754 5lq0:A (2.9) BS02 CA ? GO:0001525 ... P07355 28669632
    373755 5lq0:A (2.9) BS03 CA ? GO:0001525 ... P07355 28669632
    373756 5lq0:B (2.9) BS01 CA ? GO:0001525 ... P07355 28669632
    373757 5lq0:B (2.9) BS02 CA ? GO:0001525 ... P07355 28669632
    373758 5lq0:B (2.9) BS03 CA ? GO:0001525 ... P07355 28669632
    373759 5lq1:A (1.41) BS01 MG ? GO:0043190 ... Q119I9 29170493
    373760 5lq1:A (1.41) BS02 GB ? GO:0043190 ... Q119I9 29170493 MOAD: Kd=30.63uM
    373761 5lq1:B (1.41) BS01 MG ? GO:0043190 ... Q119I9 29170493
    373762 5lq1:B (1.41) BS02 GB ? GO:0043190 ... Q119I9 29170493 MOAD: Kd=30.63uM
    373763 5lq2:A (3.4) BS01 CA ? GO:0001525 ... P07355 28669632
    373764 5lq2:A (3.4) BS02 CA ? GO:0001525 ... P07355 28669632
    373765 5lq2:A (3.4) BS03 CA ? GO:0001525 ... P07355 28669632
    373766 5lq2:A (3.4) BS04 CA ? GO:0001525 ... P07355 28669632
    373767 5lq2:A (3.4) BS05 CA ? GO:0001525 ... P07355 28669632
    373768 5lq2:B (3.4) BS01 CA ? GO:0001525 ... P07355 28669632
    373769 5lq2:B (3.4) BS02 CA ? GO:0001525 ... P07355 28669632
    373770 5lq2:B (3.4) BS03 CA ? GO:0001525 ... P07355 28669632
    373771 5lq2:B (3.4) BS04 CA ? GO:0001525 ... P07355 28669632
    373772 5lq4:A (2.65) BS01 FMN ? GO:0000166 ... B8HTZ1 27841750
    373773 5lq4:A (2.65) BS02 FMN ? GO:0000166 ... B8HTZ1 27841750
    373774 5lq4:B (2.65) BS01 FMN ? GO:0000166 ... B8HTZ1 27841750
    373775 5lq4:B (2.65) BS02 FMN ? GO:0000166 ... B8HTZ1 27841750
    373776 5lq5:A (1.46) BS01 PO3 ? GO:0042597 ... A3PC74 29170493
    373777 5lq8:A (1.52) BS01 GB ? GO:0042597 ... A3PC74 29170493 MOAD: Kd=108.8uM
    373778 5lq8:A (1.52) BS02 GB ? GO:0042597 ... A3PC74 29170493 MOAD: Kd=108.8uM
    373779 5lq9:A (1.9) BS01 72K 3.6.4.10 GO:0005524 ... P07900 N/A BindingDB: IC50=94nM
    373780 5lqa:A (1.2) BS01 619 2.1.1.6 GO:0000287 ... P22734 N/A
    373781 5lqa:A (1.2) BS02 MG 2.1.1.6 GO:0000287 ... P22734 N/A
    373782 5lqc:A (1.903) BS01 542 2.1.1.6 GO:0000287 ... P22734 N/A
    373783 5lqc:A (1.903) BS02 MG 2.1.1.6 GO:0000287 ... P22734 N/A
    373784 5lqf:A (2.06) BS01 4SP 2.7.11.22
    2.7.11.23
    GO:0000082 ... P06493 28005359 BindingDB: IC50=250nM
    373785 5lqf:D (2.06) BS01 4SP 2.7.11.22
    2.7.11.23
    GO:0000082 ... P06493 28005359 BindingDB: IC50=250nM
    373786 5lqj:B (2.41) BS01 72N 2.1.1.6 GO:0000287 ... P22734 N/A
    373787 5lqj:C (2.41) BS01 72N 2.1.1.6 GO:0000287 ... P22734 N/A
    373788 5lqj:D (2.41) BS01 72N 2.1.1.6 GO:0000287 ... P22734 N/A
    373789 5lqk:A (2.24) BS01 MG 2.1.1.6 GO:0000287 ... P22734 N/A
    373790 5lqk:A (2.24) BS02 72M 2.1.1.6 GO:0000287 ... P22734 N/A
    373791 5lqm:A (1.62) BS01 SF4 2.5.1.72 GO:0005737 ... Q9X1X7 27545412
    373792 5lqm:A (1.62) BS02 FLC 2.5.1.72 GO:0005737 ... Q9X1X7 27545412
    373793 5lqn:A (1.72) BS01 72O 2.1.1.6 GO:0000287 ... P22734 N/A
    373794 5lqq:A (2.4) BS01 MAN 3.1.4.39 GO:0001953 ... Q64610 27982588
    373795 5lqq:A (2.4) BS02 ZN 3.1.4.39 GO:0001953 ... Q64610 27982588
    373796 5lqq:A (2.4) BS03 ZN 3.1.4.39 GO:0001953 ... Q64610 27982588
    373797 5lqq:A (2.4) BS04 CA 3.1.4.39 GO:0001953 ... Q64610 27982588
    373798 5lqq:A (2.4) BS05 72P 3.1.4.39 GO:0001953 ... Q64610 27982588 MOAD: ic50=81nM
    373799 5lqr:A (1.5) BS01 MG 2.1.1.6 GO:0000287 ... P22734 N/A
    373800 5lqr:A (1.5) BS02 72W 2.1.1.6 GO:0000287 ... P22734 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).