SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    373801 5lqs:A (1.9) BS01 SF4 2.5.1.72 GO:0005737 ... Q9X1X7 27545412
    373802 5lqs:A (1.9) BS02 NTM 2.5.1.72 GO:0005737 ... Q9X1X7 27545412
    373803 5lqu:A (1.8) BS01 619 2.1.1.6 GO:0000287 ... P22734 N/A
    373804 5lqu:A (1.8) BS02 MG 2.1.1.6 GO:0000287 ... P22734 N/A
    373805 5lqu:B (1.8) BS01 619 2.1.1.6 GO:0000287 ... P22734 N/A
    373806 5lqu:B (1.8) BS02 MG 2.1.1.6 GO:0000287 ... P22734 N/A
    373807 5lqv:A (-1.00) BS01 PGM ? GO:0006869 ... A0AT29 28266846
    373808 5lqw:A (5.8) BS01 rna ? GO:0000244 ... P33334 27562955
    373809 5lqw:A (5.8) BS02 rna ? GO:0000244 ... P33334 27562955
    373810 5lqw:A (5.8) BS03 rna ? GO:0000244 ... P33334 27562955
    373811 5lqw:A (5.8) BS04 rna ? GO:0000244 ... P33334 27562955
    373812 5lqw:B (5.8) BS01 rna ? GO:0000244 ... P36048 27562955
    373813 5lqw:E (5.8) BS01 rna ? GO:0000282 ... P25337 27562955
    373814 5lqw:F (5.8) BS01 rna ? GO:0000387 ... Q12046 27562955
    373815 5lqw:M (5.8) BS01 rna ? GO:0000350 ... P28004 27562955
    373816 5lqw:Q (5.8) BS01 rna ? GO:0000245 ... P49955 27562955
    373817 5lqw:Q (5.8) BS02 rna ? GO:0000245 ... P49955 27562955
    373818 5lqw:R (5.8) BS01 rna ? GO:0000245 ... Q12309 27562955
    373819 5lqw:Y (5.8) BS01 rna ? GO:0000245 ... Q06835 27562955
    373820 5lqx:A (7.9) BS01 ATP ? GO:0005524 ... C0HK51
    W1Q6W1
    27791192
    373821 5lqx:B (7.9) BS01 ADP ? GO:0005524 ... C0HK51
    W1Q6W1
    27791192
    373822 5lqx:C (7.9) BS01 ADP ? GO:0005524 ... C0HK51
    W1Q6W1
    27791192
    373823 5lqx:D (7.9) BS01 ADP 7.1.2.2 GO:0005524 ... C0HK52 27791192
    373824 5lqx:E (7.9) BS01 ADP 7.1.2.2 GO:0005524 ... C0HK52 27791192
    373825 5lqx:F (7.9) BS01 ADP 7.1.2.2 GO:0005524 ... C0HK52 27791192
    373826 5lqy:A (7.8) BS01 ATP ? GO:0005524 ... C0HK51
    W1Q6W1
    27791192
    373827 5lqy:B (7.8) BS01 ADP ? GO:0005524 ... C0HK51
    W1Q6W1
    27791192
    373828 5lqy:C (7.8) BS01 ADP ? GO:0005524 ... C0HK51
    W1Q6W1
    27791192
    373829 5lqy:D (7.8) BS01 ADP 7.1.2.2 GO:0005524 ... C0HK52 27791192
    373830 5lqy:E (7.8) BS01 ADP 7.1.2.2 GO:0005524 ... C0HK52 27791192
    373831 5lqy:F (7.8) BS01 ADP 7.1.2.2 GO:0005524 ... C0HK52 27791192
    373832 5lqy:V (7.8) BS01 peptide ? GO:0005739 ... C0HK58 27791192
    373833 5lqz:A (7.0) BS01 ATP ? GO:0005524 ... W1Q6W1 27791192
    373834 5lqz:B (7.0) BS01 ADP ? GO:0005524 ... W1Q6W1 27791192
    373835 5lqz:C (7.0) BS01 ADP ? GO:0005524 ... W1Q6W1 27791192
    373836 5lqz:D (7.0) BS01 ADP 7.1.2.2 GO:0005524 ... W1QA59 27791192
    373837 5lqz:E (7.0) BS01 ADP 7.1.2.2 GO:0005524 ... W1QA59 27791192
    373838 5lqz:F (7.0) BS01 ADP 7.1.2.2 GO:0005524 ... W1QA59 27791192
    373839 5lr0:A (2.59) BS01 SIA 3.4.24.69 GO:0005576 ... A5JGM8 29158482
    373840 5lr0:B (2.59) BS01 SIA 3.4.24.69 GO:0005576 ... A5JGM8 29158482
    373841 5lr1:A (1.44) BS01 72Y 3.6.4.10 GO:0005524 ... P07900 N/A
    373842 5lr6:A (2.3) BS01 731 2.1.1.6 GO:0000287 ... P22734 N/A
    373843 5lr6:B (2.3) BS01 731 2.1.1.6 GO:0000287 ... P22734 N/A
    373844 5lr6:C (2.3) BS01 731 2.1.1.6 GO:0000287 ... P22734 N/A
    373845 5lr6:D (2.3) BS01 731 2.1.1.6 GO:0000287 ... P22734 N/A
    373846 5lr7:A (1.86) BS01 73J 3.6.4.10 GO:0005524 ... P07900 N/A
    373847 5lr8:A (2.7) BS01 PLP 2.4.1.1 GO:0004645 ... F2E0G2 28407006
    373848 5lr8:B (2.7) BS01 PLP 2.4.1.1 GO:0004645 ... F2E0G2 28407006
    373849 5lra:A (3.0) BS01 BGC 2.4.1.1 GO:0004645 ... F2E0G2 28407006
    373850 5lra:A (3.0) BS02 GLC 2.4.1.1 GO:0004645 ... F2E0G2 28407006
    373851 5lra:A (3.0) BS03 GLC 2.4.1.1 GO:0004645 ... F2E0G2 28407006
    373852 5lra:A (3.0) BS04 GLC 2.4.1.1 GO:0004645 ... F2E0G2 28407006
    373853 5lra:A (3.0) BS05 PLP 2.4.1.1 GO:0004645 ... F2E0G2 28407006
    373854 5lra:B (3.0) BS01 BGC 2.4.1.1 GO:0004645 ... F2E0G2 28407006
    373855 5lra:B (3.0) BS02 BGC 2.4.1.1 GO:0004645 ... F2E0G2 28407006
    373856 5lra:B (3.0) BS03 GLC 2.4.1.1 GO:0004645 ... F2E0G2 28407006
    373857 5lra:B (3.0) BS04 GLC 2.4.1.1 GO:0004645 ... F2E0G2 28407006
    373858 5lra:B (3.0) BS05 GLC 2.4.1.1 GO:0004645 ... F2E0G2 28407006
    373859 5lra:B (3.0) BS06 PLP 2.4.1.1 GO:0004645 ... F2E0G2 28407006
    373860 5lrb:A (2.9) BS01 GLC 2.4.1.1 GO:0004645 ... F2E0G2 28407006
    373861 5lrb:A (2.9) BS02 PLP 2.4.1.1 GO:0004645 ... F2E0G2 28407006
    373862 5lrb:B (2.9) BS01 GLC 2.4.1.1 GO:0004645 ... F2E0G2 28407006
    373863 5lrb:B (2.9) BS02 AC1 2.4.1.1 GO:0004645 ... F2E0G2 28407006
    373864 5lrb:B (2.9) BS03 GLC 2.4.1.1 GO:0004645 ... F2E0G2 28407006
    373865 5lrb:B (2.9) BS04 PLP 2.4.1.1 GO:0004645 ... F2E0G2 28407006
    373866 5lrc:A (2.0) BS01 PLP 2.4.1.1 GO:0000166 ... P00489 28483603
    373867 5lrc:A (2.0) BS02 73E 2.4.1.1 GO:0000166 ... P00489 28483603 MOAD: Ki=7uM
    BindingDB: Ki=7000nM
    373868 5lrd:A (1.8) BS01 KS2 2.4.1.1 GO:0000166 ... P00489 28483603 MOAD: Ki=1.7uM
    373869 5lrd:A (1.8) BS02 PLP 2.4.1.1 GO:0000166 ... P00489 28483603
    373870 5lre:A (1.8) BS01 KS3 2.4.1.1 GO:0000166 ... P00489 27522507
    373871 5lre:A (1.8) BS02 KS3 2.4.1.1 GO:0000166 ... P00489 27522507
    373872 5lre:A (1.8) BS03 PLP 2.4.1.1 GO:0000166 ... P00489 27522507
    373873 5lrf:A (1.75) BS01 KS3 2.4.1.1 GO:0000166 ... P00489 28483603 MOAD: Ki=0.41uM
    373874 5lrf:A (1.75) BS02 KS3 2.4.1.1 GO:0000166 ... P00489 28483603 MOAD: Ki=0.41uM
    373875 5lrf:A (1.75) BS03 PLP 2.4.1.1 GO:0000166 ... P00489 28483603
    373876 5lrg:A (2.02) BS01 peptide 3.4.17.2 GO:0004181 ... P09955 27604544
    373877 5lrg:A (2.02) BS02 ZN 3.4.17.2 GO:0004181 ... P09955 27604544
    373878 5lrg:B (2.02) BS01 peptide 3.4.17.2 GO:0004181 ... P09955 27604544
    373879 5lrg:B (2.02) BS02 ZN 3.4.17.2 GO:0004181 ... P09955 27604544
    373880 5lrg:C (2.02) BS01 peptide 3.4.17.2 GO:0004181 ... P09955 27604544
    373881 5lrg:C (2.02) BS02 ZN 3.4.17.2 GO:0004181 ... P09955 27604544
    373882 5lri:L (2.4) BS01 BCL ? GO:0009772 ... Q3J1A5 27687473
    373883 5lri:L (2.4) BS02 BPH ? GO:0009772 ... Q3J1A5 27687473
    373884 5lri:L (2.4) BS03 U10 ? GO:0009772 ... Q3J1A5 27687473
    373885 5lri:L (2.4) BS04 FE ? GO:0009772 ... Q3J1A5 27687473
    373886 5lri:L (2.4) BS05 BCL ? GO:0009772 ... Q3J1A5 27687473
    373887 5lri:L (2.4) BS06 BCL ? GO:0009772 ... Q3J1A5 27687473
    373888 5lri:L (2.4) BS07 BPH ? GO:0009772 ... Q3J1A5 27687473
    373889 5lri:M (2.4) BS01 BPH ? GO:0009772 ... Q3J1A6 27687473
    373890 5lri:M (2.4) BS02 FE ? GO:0009772 ... Q3J1A6 27687473
    373891 5lri:M (2.4) BS03 BCL ? GO:0009772 ... Q3J1A6 27687473
    373892 5lri:M (2.4) BS04 BCL ? GO:0009772 ... Q3J1A6 27687473
    373893 5lri:M (2.4) BS05 BCL ? GO:0009772 ... Q3J1A6 27687473
    373894 5lri:M (2.4) BS06 BPH ? GO:0009772 ... Q3J1A6 27687473
    373895 5lri:M (2.4) BS07 U10 ? GO:0009772 ... Q3J1A6 27687473
    373896 5lri:M (2.4) BS08 SPN ? GO:0009772 ... Q3J1A6 27687473
    373897 5lrj:A (2.2) BS01 peptide 3.4.17.2 GO:0004181 ... P09955 27604544
    373898 5lrj:A (2.2) BS02 ZN 3.4.17.2 GO:0004181 ... P09955 27604544
    373899 5lrj:B (2.2) BS01 peptide 3.4.17.2 GO:0004181 ... P09955 27604544
    373900 5lrj:B (2.2) BS02 ZN 3.4.17.2 GO:0004181 ... P09955 27604544
    373901 5lrj:C (2.2) BS01 peptide 3.4.17.2 GO:0004181 ... P09955 27604544
    373902 5lrj:C (2.2) BS02 ZN 3.4.17.2 GO:0004181 ... P09955 27604544
    373903 5lrk:A (2.3) BS01 peptide 3.4.17.2 GO:0004181 ... P09955 27604544
    373904 5lrk:A (2.3) BS02 ZN 3.4.17.2 GO:0004181 ... P09955 27604544
    373905 5lrk:B (2.3) BS01 peptide 3.4.17.2 GO:0004181 ... P09955 27604544
    373906 5lrk:B (2.3) BS02 ZN 3.4.17.2 GO:0004181 ... P09955 27604544
    373907 5lrk:C (2.3) BS01 peptide 3.4.17.2 GO:0004181 ... P09955 27604544
    373908 5lrk:C (2.3) BS02 ZN 3.4.17.2 GO:0004181 ... P09955 27604544
    373909 5lrl:A (1.33) BS01 73S 3.6.4.10 GO:0005524 ... P07900 31697501
    373910 5lrm:A (1.75) BS01 ZN 2.7.-.- GO:0016772 ... A0A0R6L508 28059088
    373911 5lrm:A (1.75) BS02 ZN 2.7.-.- GO:0016772 ... A0A0R6L508 28059088
    373912 5lrn:A (1.55) BS01 ZN 2.7.-.- GO:0016772 ... A0A0R6L508 28059088
    373913 5lrn:B (1.55) BS01 ZN 2.7.-.- GO:0016772 ... A0A0R6L508 28059088
    373914 5lrp:A (1.941) BS01 ZN 3.1.13.- N/A Q5S581 28777079
    373915 5lrp:A (1.941) BS02 MG 3.1.13.- N/A Q5S581 28777079
    373916 5lrp:B (1.941) BS01 ZN 3.1.13.- N/A Q5S581 28777079
    373917 5lrp:B (1.941) BS02 MG 3.1.13.- N/A Q5S581 28777079
    373918 5lrq:A (1.7) BS01 4WG ? N/A O60885 31212132 BindingDB: Kd=1600nM
    373919 5lrr:A (2.171) BS01 GSH ? GO:0003677 ... P22262 27930316
    373920 5lrr:B (2.171) BS01 GSH ? GO:0003677 ... P22262 27930316
    373921 5lrr:C (2.171) BS01 GSH ? GO:0003677 ... P22262 27930316
    373922 5lrr:D (2.171) BS01 GSH ? GO:0003677 ... P22262 27930316
    373923 5lrr:E (2.171) BS01 GSH ? GO:0003677 ... P22262 27930316
    373924 5lrr:F (2.171) BS01 GSH ? GO:0003677 ... P22262 27930316
    373925 5lrr:G (2.171) BS01 GSH ? GO:0003677 ... P22262 27930316
    373926 5lrr:H (2.171) BS01 GSH ? GO:0003677 ... P22262 27930316
    373927 5lrs:A (2.9) BS01 dna ? GO:0003677 ... P22262 27930316
    373928 5lrs:A (2.9) BS02 dna ? GO:0003677 ... P22262 27930316
    373929 5lrs:A (2.9) BS03 GSH ? GO:0003677 ... P22262 27930316
    373930 5lrs:B (2.9) BS01 dna ? GO:0003677 ... P22262 27930316
    373931 5lrs:B (2.9) BS02 dna ? GO:0003677 ... P22262 27930316
    373932 5lrs:B (2.9) BS03 GSH ? GO:0003677 ... P22262 27930316
    373933 5lrt:A (1.85) BS01 ADP 3.4.-.- GO:0005524 ... A0LU48 28119453
    373934 5lrt:A (1.85) BS02 MG 3.4.-.- GO:0005524 ... A0LU48 28119453
    373935 5lrt:A (1.85) BS03 MG 3.4.-.- GO:0005524 ... A0LU48 28119453
    373936 5lrt:A (1.85) BS04 MG 3.4.-.- GO:0005524 ... A0LU48 28119453
    373937 5lrt:A (1.85) BS05 PO4 3.4.-.- GO:0005524 ... A0LU48 28119453
    373938 5lry:L (1.4) BS01 FCO 1.12.99.6 GO:0005515 ... P0ACD8 30070475
    373939 5lry:L (1.4) BS02 MG 1.12.99.6 GO:0005515 ... P0ACD8 30070475
    373940 5lry:M (1.4) BS01 FCO 1.12.99.6 GO:0005515 ... P0ACD8 30070475
    373941 5lry:M (1.4) BS02 MG 1.12.99.6 GO:0005515 ... P0ACD8 30070475
    373942 5lry:S (1.4) BS01 SF4 1.12.99.6 GO:0005515 ... P69739 30070475
    373943 5lry:S (1.4) BS02 F3S 1.12.99.6 GO:0005515 ... P69739 30070475
    373944 5lry:S (1.4) BS03 SF3 1.12.99.6 GO:0005515 ... P69739 30070475
    373945 5lry:T (1.4) BS01 SF4 1.12.99.6 GO:0005515 ... P69739 30070475
    373946 5lry:T (1.4) BS02 F3S 1.12.99.6 GO:0005515 ... P69739 30070475
    373947 5lry:T (1.4) BS03 SF3 1.12.99.6 GO:0005515 ... P69739 30070475
    373948 5lrz:A (2.0) BS01 73Y 3.6.4.10 GO:0005524 ... P07900 N/A
    373949 5ls1:A (1.85) BS01 73Z 3.6.4.10 GO:0005524 ... P07900 N/A
    373950 5ls3:A (1.754) BS01 ZN 3.5.2.6 GO:0008270 ... Q8G9Q0 28252254
    373951 5ls3:A (1.754) BS02 ZN 3.5.2.6 GO:0008270 ... Q8G9Q0 28252254
    373952 5ls3:A (1.754) BS03 ZN 3.5.2.6 GO:0008270 ... Q8G9Q0 28252254
    373953 5ls3:B (1.754) BS01 ZN 3.5.2.6 GO:0008270 ... Q8G9Q0 28252254
    373954 5ls3:B (1.754) BS02 ZN 3.5.2.6 GO:0008270 ... Q8G9Q0 28252254
    373955 5ls3:B (1.754) BS03 ZN 3.5.2.6 GO:0008270 ... Q8G9Q0 28252254
    373956 5ls4:A (1.469) BS01 CA 3.1.13.- N/A Q5S581 28777079
    373957 5ls4:A (1.469) BS02 ZN 3.1.13.- N/A Q5S581 28777079
    373958 5ls6:A (3.47) BS01 peptide 2.1.1.356 GO:0006338 ... Q15910 27739677
    373959 5ls6:A (3.47) BS02 ZN 2.1.1.356 GO:0006338 ... Q15910 27739677
    373960 5ls6:A (3.47) BS03 ZN 2.1.1.356 GO:0006338 ... Q15910 27739677
    373961 5ls6:A (3.47) BS04 ZN 2.1.1.356 GO:0006338 ... Q15910 27739677
    373962 5ls6:A (3.47) BS05 ZN 2.1.1.356 GO:0006338 ... Q15910 27739677
    373963 5ls6:A (3.47) BS06 ZN 2.1.1.356 GO:0006338 ... Q15910 27739677
    373964 5ls6:A (3.47) BS07 ZN 2.1.1.356 GO:0006338 ... Q15910 27739677
    373965 5ls6:A (3.47) BS08 ZN 2.1.1.356 GO:0006338 ... Q15910 27739677
    373966 5ls6:A (3.47) BS09 ZN 2.1.1.356 GO:0006338 ... Q15910 27739677
    373967 5ls6:A (3.47) BS10 74D 2.1.1.356 GO:0006338 ... Q15910 27739677
    373968 5ls6:B (3.47) BS01 peptide ? N/A O75530 27739677
    373969 5ls6:D (3.47) BS01 ZN 2.1.1.356 GO:0006338 ... Q15910 27739677
    373970 5ls6:D (3.47) BS02 ZN 2.1.1.356 GO:0006338 ... Q15910 27739677
    373971 5ls6:D (3.47) BS03 ZN 2.1.1.356 GO:0006338 ... Q15910 27739677
    373972 5ls6:D (3.47) BS04 ZN 2.1.1.356 GO:0006338 ... Q15910 27739677
    373973 5ls6:D (3.47) BS05 ZN 2.1.1.356 GO:0006338 ... Q15910 27739677
    373974 5ls6:D (3.47) BS06 ZN 2.1.1.356 GO:0006338 ... Q15910 27739677
    373975 5ls6:D (3.47) BS07 ZN 2.1.1.356 GO:0006338 ... Q15910 27739677
    373976 5ls6:D (3.47) BS08 ZN 2.1.1.356 GO:0006338 ... Q15910 27739677
    373977 5ls6:D (3.47) BS09 74D 2.1.1.356 GO:0006338 ... Q15910 27739677
    373978 5ls6:E (3.47) BS01 peptide ? N/A O75530 27739677
    373979 5ls6:G (3.47) BS01 peptide 2.1.1.356 GO:0006338 ... Q15910 27739677
    373980 5ls6:G (3.47) BS02 ZN 2.1.1.356 GO:0006338 ... Q15910 27739677
    373981 5ls6:G (3.47) BS03 ZN 2.1.1.356 GO:0006338 ... Q15910 27739677
    373982 5ls6:G (3.47) BS04 ZN 2.1.1.356 GO:0006338 ... Q15910 27739677
    373983 5ls6:G (3.47) BS05 ZN 2.1.1.356 GO:0006338 ... Q15910 27739677
    373984 5ls6:G (3.47) BS06 ZN 2.1.1.356 GO:0006338 ... Q15910 27739677
    373985 5ls6:G (3.47) BS07 ZN 2.1.1.356 GO:0006338 ... Q15910 27739677
    373986 5ls6:G (3.47) BS08 ZN 2.1.1.356 GO:0006338 ... Q15910 27739677
    373987 5ls6:G (3.47) BS09 ZN 2.1.1.356 GO:0006338 ... Q15910 27739677
    373988 5ls6:G (3.47) BS10 74D 2.1.1.356 GO:0006338 ... Q15910 27739677
    373989 5ls6:H (3.47) BS01 peptide ? N/A O75530 27739677
    373990 5ls6:J (3.47) BS01 peptide 2.1.1.356 GO:0006338 ... Q15910 27739677
    373991 5ls6:J (3.47) BS02 ZN 2.1.1.356 GO:0006338 ... Q15910 27739677
    373992 5ls6:J (3.47) BS03 ZN 2.1.1.356 GO:0006338 ... Q15910 27739677
    373993 5ls6:J (3.47) BS04 ZN 2.1.1.356 GO:0006338 ... Q15910 27739677
    373994 5ls6:J (3.47) BS05 ZN 2.1.1.356 GO:0006338 ... Q15910 27739677
    373995 5ls6:J (3.47) BS06 ZN 2.1.1.356 GO:0006338 ... Q15910 27739677
    373996 5ls6:J (3.47) BS07 ZN 2.1.1.356 GO:0006338 ... Q15910 27739677
    373997 5ls6:J (3.47) BS08 ZN 2.1.1.356 GO:0006338 ... Q15910 27739677
    373998 5ls6:J (3.47) BS09 ZN 2.1.1.356 GO:0006338 ... Q15910 27739677
    373999 5ls6:J (3.47) BS10 74D 2.1.1.356 GO:0006338 ... Q15910 27739677
    374000 5ls6:K (3.47) BS01 peptide ? N/A O75530 27739677

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).