SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    374401 5lwd:E (1.23) BS03 CA 3.4.24.27 GO:0004222 ... P00800 27959500
    374402 5lwd:E (1.23) BS04 CA 3.4.24.27 GO:0004222 ... P00800 27959500
    374403 5lwd:E (1.23) BS05 CA 3.4.24.27 GO:0004222 ... P00800 27959500
    374404 5lwd:E (1.23) BS06 79E 3.4.24.27 GO:0004222 ... P00800 27959500 MOAD: Kd=0.57uM
    374405 5lwe:A (2.8) BS01 79K ? GO:0004930 ... P51686 27926729 BindingDB: IC50=2.8nM, Ki=3.7nM
    374406 5lwe:B (2.8) BS01 79K ? GO:0004930 ... P51686 27926729 BindingDB: IC50=2.8nM, Ki=3.7nM
    374407 5lwh:A (1.47) BS01 ZN ? GO:0006826 ... Q0P8Q4 28383577
    374408 5lwk:A (2.11) BS01 BEF ? GO:0000156 ... A0A247D6V8 28577341
    374409 5lwk:A (2.11) BS02 MG ? GO:0000156 ... A0A247D6V8 28577341
    374410 5lwk:B (2.11) BS01 BEF ? GO:0000156 ... A0A247D6V8 28577341
    374411 5lwk:B (2.11) BS02 MG ? GO:0000156 ... A0A247D6V8 28577341
    374412 5lwm:A (1.55) BS01 79T 2.7.10.2 GO:0004672 ... P52333 27840070 MOAD: Kd=0.00134uM
    BindingDB: EC50=237nM, IC50=0.130000nM
    374413 5lwm:A (1.55) BS02 PHU 2.7.10.2 GO:0004672 ... P52333 27840070
    374414 5lwn:A (1.6) BS01 PHU 2.7.10.2 GO:0004672 ... P52333 27840070
    374415 5lwn:A (1.6) BS02 79R 2.7.10.2 GO:0004672 ... P52333 27840070 MOAD: ic50=17nM
    374416 5lwn:A (1.6) BS03 79S 2.7.10.2 GO:0004672 ... P52333 27840070
    374417 5lwo:A (1.183) BS01 RXR 3.2.1.17 GO:0003796 ... P00720 28221042
    374418 5lwp:A (2.4) BS01 79U ? GO:0003677 ... P51449 27815118 MOAD: ic50=120nM
    BindingDB: IC50=40nM
    374419 5lwr:A (1.249) BS01 7B2 3.4.23.22 GO:0004190 ... P11838 28097765
    374420 5lws:A (1.03) BS01 7B2 3.4.23.22 GO:0004190 ... P11838 28097765
    374421 5lws:A (1.03) BS02 TFA 3.4.23.22 GO:0004190 ... P11838 28097765
    374422 5lwt:A (1.069) BS01 TFA 3.4.23.22 GO:0004190 ... P11838 28097765
    374423 5lwu:A (1.109) BS01 TFA 3.4.23.22 GO:0004190 ... P11838 28097765
    374424 5lwu:A (1.109) BS02 TFA 3.4.23.22 GO:0004190 ... P11838 28097765
    374425 5lwv:A (1.9) BS01 UDP 2.4.1.255 GO:0006493 ... O15294
    P51610
    28659383
    374426 5lww:A (2.65) BS01 CU 1.10.3.2 GO:0005507 ... A2QS62 N/A
    374427 5lww:A (2.65) BS02 CU 1.10.3.2 GO:0005507 ... A2QS62 N/A
    374428 5lww:A (2.65) BS03 CU 1.10.3.2 GO:0005507 ... A2QS62 N/A
    374429 5lww:A (2.65) BS04 CU 1.10.3.2 GO:0005507 ... A2QS62 N/A
    374430 5lww:A (2.65) BS05 ZN 1.10.3.2 GO:0005507 ... A2QS62 N/A
    374431 5lww:A (2.65) BS06 ZN 1.10.3.2 GO:0005507 ... A2QS62 N/A
    374432 5lww:A (2.65) BS07 ZN 1.10.3.2 GO:0005507 ... A2QS62 N/A
    374433 5lww:A (2.65) BS08 ZN 1.10.3.2 GO:0005507 ... A2QS62 N/A
    374434 5lwx:A (1.49) BS01 CU 1.10.3.2 GO:0005507 ... A2QS62 N/A
    374435 5lwx:A (1.49) BS02 CU 1.10.3.2 GO:0005507 ... A2QS62 N/A
    374436 5lwx:A (1.49) BS03 CU 1.10.3.2 GO:0005507 ... A2QS62 N/A
    374437 5lwx:A (1.49) BS04 CU 1.10.3.2 GO:0005507 ... A2QS62 N/A
    374438 5lwy:A (2.4) BS01 ZN ? GO:0016020 ... Q86V24 28329765
    374439 5lwz:A (2.1) BS01 FE 3.4.13.19 GO:0005575 ... Q4WMJ8 28525266
    374440 5lwz:A (2.1) BS02 FE 3.4.13.19 GO:0005575 ... Q4WMJ8 28525266
    374441 5lwz:B (2.1) BS01 FE 3.4.13.19 GO:0005575 ... Q4WMJ8 28525266
    374442 5lwz:B (2.1) BS02 FE 3.4.13.19 GO:0005575 ... Q4WMJ8 28525266
    374443 5lwz:C (2.1) BS01 FE 3.4.13.19 GO:0005575 ... Q4WMJ8 28525266
    374444 5lwz:C (2.1) BS02 FE 3.4.13.19 GO:0005575 ... Q4WMJ8 28525266
    374445 5lx0:A (2.4) BS01 FE 3.4.13.19 GO:0005575 ... Q4WMJ8 28525266
    374446 5lx0:A (2.4) BS02 FE 3.4.13.19 GO:0005575 ... Q4WMJ8 28525266
    374447 5lx1:A (2.7) BS01 FE 3.4.13.19 GO:0005575 ... Q4WMJ8 28525266
    374448 5lx1:A (2.7) BS02 FE 3.4.13.19 GO:0005575 ... Q4WMJ8 28525266
    374449 5lx2:A (2.579) BS01 peptide ? N/A C5DN49 N/A
    374450 5lx3:A (2.1) BS01 7A1 2.4.2.12 GO:0005125 ... P43490 N/A
    374451 5lx3:B (2.1) BS01 7A1 2.4.2.12 GO:0005125 ... P43490 N/A
    374452 5lx4:A (1.9) BS01 FE 3.4.13.19 GO:0005575 ... Q4WMJ8 28525266
    374453 5lx5:A (1.88) BS01 7A0 2.4.2.12 GO:0005125 ... P43490 N/A
    374454 5lx5:A (1.88) BS02 7A0 2.4.2.12 GO:0005125 ... P43490 N/A
    374455 5lx5:B (1.88) BS01 7A0 2.4.2.12 GO:0005125 ... P43490 N/A
    374456 5lx5:B (1.88) BS02 7A0 2.4.2.12 GO:0005125 ... P43490 N/A
    374457 5lx6:A (1.25) BS01 78P 2.4.2.- GO:0003950 ... Q53GL7 28001384 MOAD: ic50=1900nM
    BindingDB: IC50=43800nM
    374458 5lx6:B (1.25) BS01 78P 2.4.2.- GO:0003950 ... Q53GL7 28001384 MOAD: ic50=1900nM
    BindingDB: IC50=43800nM
    374459 5lx7:A (1.95) BS01 FE 3.4.13.19 GO:0005575 ... Q4WMJ8 28525266
    374460 5lx9:A (2.4) BS01 ZN ? GO:0016020 ... Q86V24 28329765
    374461 5lxa:A (3.0) BS01 ZN ? GO:0016020 ... Q86V24 28329765
    374462 5lxb:A (2.34) BS01 7A9 ? GO:0004888 ... Q8WSF8 27656911
    374463 5lxb:B (2.34) BS01 7A9 ? GO:0004888 ... Q8WSF8 27656911
    374464 5lxb:C (2.34) BS01 7A9 ? GO:0004888 ... Q8WSF8 27656911
    374465 5lxb:C (2.34) BS02 7A9 ? GO:0004888 ... Q8WSF8 27656911
    374466 5lxb:D (2.34) BS01 7A9 ? GO:0004888 ... Q8WSF8 27656911
    374467 5lxb:D (2.34) BS02 7A9 ? GO:0004888 ... Q8WSF8 27656911
    374468 5lxb:E (2.34) BS01 7A9 ? GO:0004888 ... Q8WSF8 27656911
    374469 5lxb:E (2.34) BS02 7A9 ? GO:0004888 ... Q8WSF8 27656911
    374470 5lxb:G (2.34) BS01 7A9 ? GO:0004888 ... Q8WSF8 27656911
    374471 5lxb:H (2.34) BS01 7A9 ? GO:0004888 ... Q8WSF8 27656911
    374472 5lxb:H (2.34) BS02 7A9 ? GO:0004888 ... Q8WSF8 27656911
    374473 5lxb:I (2.34) BS01 7A9 ? GO:0004888 ... Q8WSF8 27656911
    374474 5lxb:J (2.34) BS01 7A9 ? GO:0004888 ... Q8WSF8 27656911
    374475 5lxc:A (2.15) BS01 7AA 2.7.12.1 GO:0004672 ... Q92630 27766861 MOAD: ic50=10.8nM
    374476 5lxc:B (2.15) BS01 7AA 2.7.12.1 GO:0004672 ... Q92630 27766861 MOAD: ic50=10.8nM
    374477 5lxd:A (2.58) BS01 7A7 2.7.12.1 GO:0004672 ... Q92630 27766861
    374478 5lxd:B (2.58) BS01 7A7 2.7.12.1 GO:0004672 ... Q92630 27766861
    374479 5lxg:A (2.73) BS01 ZN ? GO:0016020 ... Q96A54 28329765
    374480 5lxh:A (1.58) BS01 peptide ? GO:0000045 ... Q9H0R8 28287329
    374481 5lxh:B (1.58) BS01 peptide ? GO:0000045 ... Q9H0R8 28287329
    374482 5lxh:C (1.58) BS01 peptide ? GO:0000045 ... Q9H0R8 28287329
    374483 5lxi:B (1.44) BS01 peptide ? GO:0000045 ... Q9H0R8 28287329
    374484 5lxi:D (1.44) BS01 peptide ? GO:0000045 ... Q9H0R8 28287329
    374485 5lxm:A (2.08) BS01 ADP 2.7.11.1 GO:0000212 ... O14965 27775325
    374486 5lxm:A (2.08) BS02 MG 2.7.11.1 GO:0000212 ... O14965 27775325
    374487 5lxp:A (2.07) BS01 7AG 2.4.2.- GO:0003950 ... Q460N5 27918638 MOAD: ic50=0.76uM
    374488 5lxp:B (2.07) BS01 7AG 2.4.2.- GO:0003950 ... Q460N5 27918638 MOAD: ic50=0.76uM
    374489 5lxq:A (3.335) BS01 ATP ? GO:0010960 ... Q3TWN3 27899452
    374490 5lxq:H (3.335) BS01 ATP ? GO:0010960 ... Q3TWN3 27899452
    374491 5lxs:A (2.2) BS01 GTP 3.6.5.- GO:0000226 ... P81947 28207984
    374492 5lxs:A (2.2) BS02 CA 3.6.5.- GO:0000226 ... P81947 28207984
    374493 5lxs:B (2.2) BS01 GDP ? GO:0000226 ... Q6B856 28207984
    374494 5lxs:B (2.2) BS02 7AO ? GO:0000226 ... Q6B856 28207984 MOAD: Ka=93000000M^-1
    374495 5lxs:C (2.2) BS01 GTP 3.6.5.- GO:0000226 ... P81947 28207984
    374496 5lxs:C (2.2) BS02 CA 3.6.5.- GO:0000226 ... P81947 28207984
    374497 5lxs:D (2.2) BS01 GDP ? GO:0000226 ... Q6B856 28207984
    374498 5lxs:D (2.2) BS02 7AO ? GO:0000226 ... Q6B856 28207984 MOAD: Ka=93000000M^-1
    374499 5lxs:F (2.2) BS01 ACP N/A GO:0036211 ... N/A 28207984
    374500 5lxt:A (1.9) BS01 GTP 3.6.5.- GO:0000226 ... P81947 28207984
    374501 5lxt:A (1.9) BS02 CA 3.6.5.- GO:0000226 ... P81947 28207984
    374502 5lxt:B (1.9) BS01 GDP ? GO:0000226 ... Q6B856 28207984
    374503 5lxt:B (1.9) BS02 7AK ? GO:0000226 ... Q6B856 28207984 MOAD: Ka=8720000000M^-1
    374504 5lxt:C (1.9) BS01 GTP 3.6.5.- GO:0000226 ... P81947 28207984
    374505 5lxt:C (1.9) BS02 CA 3.6.5.- GO:0000226 ... P81947 28207984
    374506 5lxt:D (1.9) BS01 GDP ? GO:0000226 ... Q6B856 28207984
    374507 5lxt:D (1.9) BS02 7AK ? GO:0000226 ... Q6B856 28207984 MOAD: Ka=8720000000M^-1
    374508 5lxt:F (1.9) BS01 ACP N/A GO:0036211 ... N/A 28207984
    374509 5lxt:F (1.9) BS02 MG N/A GO:0036211 ... N/A 28207984
    374510 5lxu:A (2.14) BS01 dna ? GO:0003677 ... Q9SNB4 N/A
    374511 5lxu:A (2.14) BS02 dna ? GO:0003677 ... Q9SNB4 N/A
    374512 5lxv:B (2.4) BS01 CA ? GO:0000272 ... A0A1L1QK37 27875311
    374513 5lxv:B (2.4) BS02 CA ? GO:0000272 ... A0A1L1QK37 27875311
    374514 5lxv:D (2.4) BS01 CA ? GO:0000272 ... A0A1L1QK37 27875311
    374515 5lxv:D (2.4) BS02 CA ? GO:0000272 ... A0A1L1QK37 27875311
    374516 5lxz:B (1.49) BS01 CU ? GO:0005975 ... D6EWM0 N/A
    374517 5lxz:B (1.49) BS02 CU ? GO:0005975 ... D6EWM0 N/A
    374518 5ly0:A (1.877) BS01 ZN ? N/A D9MPF3 30425099
    374519 5ly0:B (1.877) BS01 ZN ? N/A D9MPF3 30425099
    374520 5ly1:A (2.5) BS01 ZN 1.14.11.66
    1.14.11.69
    N/A O75164 28382930
    374521 5ly1:B (2.5) BS01 ZN 1.14.11.66
    1.14.11.69
    N/A O75164 28382930
    374522 5ly1:C (2.5) BS01 peptide 1.14.11.66
    1.14.11.69
    N/A O75164 28382930
    374523 5ly1:C (2.5) BS02 ZN 1.14.11.66
    1.14.11.69
    N/A O75164 28382930
    374524 5ly1:D (2.5) BS01 peptide 1.14.11.66
    1.14.11.69
    N/A O75164 28382930
    374525 5ly1:D (2.5) BS02 ZN 1.14.11.66
    1.14.11.69
    N/A O75164 28382930
    374526 5ly2:A (2.43) BS01 peptide 1.14.11.66
    1.14.11.69
    N/A O75164 28382930
    374527 5ly2:A (2.43) BS02 ZN 1.14.11.66
    1.14.11.69
    N/A O75164 28382930
    374528 5ly2:B (2.43) BS01 peptide 1.14.11.66
    1.14.11.69
    N/A O75164 28382930
    374529 5ly2:B (2.43) BS02 peptide 1.14.11.66
    1.14.11.69
    N/A O75164 28382930
    374530 5ly2:B (2.43) BS03 ZN 1.14.11.66
    1.14.11.69
    N/A O75164 28382930
    374531 5ly2:C (2.43) BS01 peptide 1.14.11.66
    1.14.11.69
    N/A O75164 28382930
    374532 5ly2:C (2.43) BS02 ZN 1.14.11.66
    1.14.11.69
    N/A O75164 28382930
    374533 5ly2:D (2.43) BS01 peptide 1.14.11.66
    1.14.11.69
    N/A O75164 28382930
    374534 5ly2:D (2.43) BS02 peptide 1.14.11.66
    1.14.11.69
    N/A O75164 28382930
    374535 5ly2:D (2.43) BS03 ZN 1.14.11.66
    1.14.11.69
    N/A O75164 28382930
    374536 5ly3:A (1.6) BS01 peptide 3.6.4.- GO:0005524 ... A3MWN5 27852434
    374537 5ly3:A (1.6) BS02 ADP 3.6.4.- GO:0005524 ... A3MWN5 27852434
    374538 5ly7:A (3.1) BS01 NOK 3.2.1.52 GO:0004553 ... Q9HZK0 28482153 BindingDB: Ki=300nM
    374539 5ly7:B (3.1) BS01 NOK 3.2.1.52 GO:0004553 ... Q9HZK0 28482153 BindingDB: Ki=300nM
    374540 5ly8:A (1.28) BS01 MG ? N/A U5U3S0 28196397
    374541 5ly8:A (1.28) BS02 MG ? N/A U5U3S0 28196397
    374542 5lyb:C0 (3.25) BS01 rna ? N/A Q08745 27827794
    374543 5lyb:C1 (3.25) BS01 rna ? GO:0000028 ... P0CX47 27827794
    374544 5lyb:C1 (3.25) BS02 MG ? GO:0000028 ... P0CX47 27827794
    374545 5lyb:C1 (3.25) BS03 MG ? GO:0000028 ... P0CX47 27827794
    374546 5lyb:C2 (3.25) BS01 rna ? GO:0003735 ... P48589 27827794
    374547 5lyb:C3 (3.25) BS01 rna ? GO:0000462 ... P05756 27827794
    374548 5lyb:C3 (3.25) BS02 rna ? GO:0000462 ... P05756 27827794
    374549 5lyb:C3 (3.25) BS03 OHX ? GO:0000462 ... P05756 27827794
    374550 5lyb:C4 (3.25) BS01 rna ? GO:0000028 ... P06367 27827794
    374551 5lyb:C5 (3.25) BS01 rna ? GO:0000028 ... Q01855 27827794
    374552 5lyb:C5 (3.25) BS02 rna ? GO:0000028 ... Q01855 27827794
    374553 5lyb:C5 (3.25) BS03 OHX ? GO:0000028 ... Q01855 27827794
    374554 5lyb:C6 (3.25) BS01 rna ? GO:0000462 ... P0CX51 27827794
    374555 5lyb:C7 (3.25) BS01 rna ? GO:0000028 ... P02407 27827794
    374556 5lyb:C8 (3.25) BS01 rna ? GO:0000054 ... P0CX55 27827794
    374557 5lyb:C8 (3.25) BS02 MG ? GO:0000054 ... P0CX55 27827794
    374558 5lyb:C8 (3.25) BS03 OHX ? GO:0000054 ... P0CX55 27827794
    374559 5lyb:C9 (3.25) BS01 rna ? GO:0000028 ... P07280 27827794
    374560 5lyb:D0 (3.25) BS01 rna ? GO:0000462 ... P38701 27827794
    374561 5lyb:D2 (3.25) BS01 rna ? GO:0002181 ... P0C0W1 27827794
    374562 5lyb:D3 (3.25) BS01 rna ? GO:0000462 ... P0CY39 27827794
    374563 5lyb:D4 (3.25) BS01 rna ? GO:0000462 ... P0CX31 27827794
    374564 5lyb:D5 (3.25) BS01 rna ? N/A Q3E792 27827794
    374565 5lyb:D6 (3.25) BS01 rna ? GO:0003735 ... P39939 27827794
    374566 5lyb:D6 (3.25) BS02 ZN ? GO:0003735 ... P39939 27827794
    374567 5lyb:D7 (3.25) BS01 rna ? GO:0000028 ... P35997 27827794
    374568 5lyb:D8 (3.25) BS01 rna ? GO:0000028 ... Q3E7X9 27827794
    374569 5lyb:D9 (3.25) BS01 rna ? GO:0002181 ... P41057 27827794
    374570 5lyb:D9 (3.25) BS02 MG ? GO:0002181 ... P41057 27827794
    374571 5lyb:D9 (3.25) BS03 ZN ? GO:0002181 ... P41057 27827794
    374572 5lyb:D9 (3.25) BS04 OHX ? GO:0002181 ... P41057 27827794
    374573 5lyb:E0 (3.25) BS01 rna ? GO:0002181 ... P0CX33 27827794
    374574 5lyb:E1 (3.25) BS01 rna ? GO:0003735 ... P05759 27827794
    374575 5lyb:E1 (3.25) BS02 ZN ? GO:0003735 ... P05759 27827794
    374576 5lyb:L2 (3.25) BS01 rna ? GO:0002181 ... P0CX45 27827794
    374577 5lyb:L2 (3.25) BS02 rna ? GO:0002181 ... P0CX45 27827794
    374578 5lyb:L2 (3.25) BS03 MG ? GO:0002181 ... P0CX45 27827794
    374579 5lyb:L2 (3.25) BS04 MG ? GO:0002181 ... P0CX45 27827794
    374580 5lyb:L2 (3.25) BS05 MG ? GO:0002181 ... P0CX45 27827794
    374581 5lyb:L3 (3.25) BS01 rna ? GO:0000027 ... P14126 27827794
    374582 5lyb:L3 (3.25) BS02 MG ? GO:0000027 ... P14126 27827794
    374583 5lyb:L3 (3.25) BS03 OHX ? GO:0000027 ... P14126 27827794
    374584 5lyb:L3 (3.25) BS04 OHX ? GO:0000027 ... P14126 27827794
    374585 5lyb:L4 (3.25) BS01 rna ? GO:0002181 ... P10664 27827794
    374586 5lyb:L4 (3.25) BS02 rna ? GO:0002181 ... P10664 27827794
    374587 5lyb:L4 (3.25) BS03 MG ? GO:0002181 ... P10664 27827794
    374588 5lyb:L4 (3.25) BS04 MG ? GO:0002181 ... P10664 27827794
    374589 5lyb:L4 (3.25) BS05 MG ? GO:0002181 ... P10664 27827794
    374590 5lyb:L4 (3.25) BS06 MG ? GO:0002181 ... P10664 27827794
    374591 5lyb:L4 (3.25) BS07 MG ? GO:0002181 ... P10664 27827794
    374592 5lyb:L4 (3.25) BS08 OHX ? GO:0002181 ... P10664 27827794
    374593 5lyb:L5 (3.25) BS01 rna ? GO:0000027 ... P26321 27827794
    374594 5lyb:L5 (3.25) BS02 rna ? GO:0000027 ... P26321 27827794
    374595 5lyb:L5 (3.25) BS03 OHX ? GO:0000027 ... P26321 27827794
    374596 5lyb:L6 (3.25) BS01 rna ? GO:0000027 ... Q02326 27827794
    374597 5lyb:L7 (3.25) BS01 rna ? GO:0000463 ... P05737 27827794
    374598 5lyb:L7 (3.25) BS02 rna ? GO:0000463 ... P05737 27827794
    374599 5lyb:L8 (3.25) BS01 rna ? GO:0000470 ... P17076 27827794
    374600 5lyb:L8 (3.25) BS02 rna ? GO:0000470 ... P17076 27827794

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).