SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    375001 5lza:E (3.6) BS01 rna ? GO:0001070 ... P60723 27842381
    375002 5lza:F (3.6) BS01 rna ? GO:0000027 ... P62399 27842381
    375003 5lza:F (3.6) BS02 rna ? GO:0000027 ... P62399 27842381
    375004 5lza:G (3.6) BS01 rna ? GO:0000027 ... P0AG55 27842381
    375005 5lza:H (3.6) BS01 rna ? GO:0002181 ... P0A7R1 27842381
    375006 5lza:I (3.6) BS01 rna ? GO:0000027 ... P0A7J7 27842381
    375007 5lza:J (3.6) BS01 rna ? GO:0002181 ... P0AA10 27842381
    375008 5lza:K (3.6) BS01 rna ? GO:0002181 ... P0ADY3 27842381
    375009 5lza:K (3.6) BS02 rna ? GO:0002181 ... P0ADY3 27842381
    375010 5lza:L (3.6) BS01 rna ? GO:0002181 ... P02413 27842381
    375011 5lza:M (3.6) BS01 rna ? GO:0000027 ... P0ADY7 27842381
    375012 5lza:N (3.6) BS01 rna ? GO:0000027 ... P0AG44 27842381
    375013 5lza:O (3.6) BS01 rna ? GO:0002181 ... P0C018 27842381
    375014 5lza:O (3.6) BS02 rna ? GO:0002181 ... P0C018 27842381
    375015 5lza:P (3.6) BS01 rna ? GO:0000027 ... P0A7K6 27842381
    375016 5lza:P (3.6) BS02 rna ? GO:0000027 ... P0A7K6 27842381
    375017 5lza:Q (3.6) BS01 rna ? GO:0000027 ... P0A7L3 27842381
    375018 5lza:R (3.6) BS01 rna ? GO:0002181 ... P0AG48 27842381
    375019 5lza:S (3.6) BS01 rna ? GO:0002181 ... P61175 27842381
    375020 5lza:T (3.6) BS01 rna ? GO:0000027 ... P0ADZ0 27842381
    375021 5lza:U (3.6) BS01 rna ? GO:0000027 ... P60624 27842381
    375022 5lza:V (3.6) BS01 rna ? GO:0000027 ... P68919 27842381
    375023 5lza:W (3.6) BS01 rna ? GO:0003735 ... P0A7L8 27842381
    375024 5lza:W (3.6) BS02 rna ? GO:0003735 ... P0A7L8 27842381
    375025 5lza:X (3.6) BS01 rna ? GO:0000027 ... P0A7M2 27842381
    375026 5lza:Y (3.6) BS01 rna ? GO:0000027 ... P0A7M6 27842381
    375027 5lza:Z (3.6) BS01 rna ? GO:0000027 ... P0AG51 27842381
    375028 5lza:b (3.6) BS01 rna ? GO:0000028 ... P0A7V0 27842381
    375029 5lza:c (3.6) BS01 rna ? GO:0003676 ... P0A7V3 27842381
    375030 5lza:c (3.6) BS02 rna ? GO:0003676 ... P0A7V3 27842381
    375031 5lza:d (3.6) BS01 rna ? GO:0000028 ... P0A7V8 27842381
    375032 5lza:e (3.6) BS01 rna ? GO:0000028 ... P0A7W1 27842381
    375033 5lza:e (3.6) BS02 rna ? GO:0000028 ... P0A7W1 27842381
    375034 5lza:f (3.6) BS01 rna ? GO:0003735 ... P02358 27842381
    375035 5lza:g (3.6) BS01 rna ? GO:0003723 ... P02359 27842381
    375036 5lza:h (3.6) BS01 rna ? GO:0000028 ... P0A7W7 27842381
    375037 5lza:i (3.6) BS01 rna ? GO:0000049 ... P0A7X3 27842381
    375038 5lza:i (3.6) BS02 rna ? GO:0000049 ... P0A7X3 27842381
    375039 5lza:j (3.6) BS01 rna ? GO:0000049 ... P0A7R5 27842381
    375040 5lza:k (3.6) BS01 rna ? GO:0002181 ... P0A7R9 27842381
    375041 5lza:l (3.6) BS01 rna ? GO:0000049 ... P0A7S3 27842381
    375042 5lza:m (3.6) BS01 rna ? GO:0000049 ... P0A7S9 27842381
    375043 5lza:n (3.6) BS01 rna ? GO:0000028 ... P0AG59 27842381
    375044 5lza:o (3.6) BS01 rna ? GO:0000028 ... P0ADZ4 27842381
    375045 5lza:o (3.6) BS02 rna ? GO:0000028 ... P0ADZ4 27842381
    375046 5lza:p (3.6) BS01 rna ? GO:0000028 ... P0A7T3 27842381
    375047 5lza:q (3.6) BS01 rna ? GO:0000028 ... P0AG63 27842381
    375048 5lza:r (3.6) BS01 rna ? GO:0003735 ... P0A7T7 27842381
    375049 5lza:s (3.6) BS01 rna ? GO:0003723 ... P0A7U3 27842381
    375050 5lza:t (3.6) BS01 rna ? GO:0000028 ... P0A7U7 27842381
    375051 5lza:u (3.6) BS01 rna ? GO:0000028 ... P68679 27842381
    375052 5lzb:0 (5.3) BS01 rna ? GO:0000027 ... P0A7N4 27842381
    375053 5lzb:1 (5.3) BS01 rna ? GO:0000027 ... P0A7N9 27842381
    375054 5lzb:2 (5.3) BS01 rna ? GO:0002181 ... P0A7P5 27842381
    375055 5lzb:3 (5.3) BS01 rna ? GO:0002181 ... P0A7Q1 27842381
    375056 5lzb:4 (5.3) BS01 rna ? GO:0002181 ... P0A7Q6 27842381
    375057 5lzb:4 (5.3) BS02 ZN ? GO:0002181 ... P0A7Q6 27842381
    375058 5lzb:6 (5.3) BS01 rna ? GO:0002181 ... P0A7M9 27842381
    375059 5lzb:6 (5.3) BS02 ZN ? GO:0002181 ... P0A7M9 27842381
    375060 5lzb:C (5.3) BS01 rna ? GO:0000027 ... P60422 27842381
    375061 5lzb:C (5.3) BS02 rna ? GO:0000027 ... P60422 27842381
    375062 5lzb:D (5.3) BS01 rna ? GO:0000027 ... P60438 27842381
    375063 5lzb:E (5.3) BS01 rna ? GO:0001070 ... P60723 27842381
    375064 5lzb:F (5.3) BS01 rna ? GO:0000027 ... P62399 27842381
    375065 5lzb:F (5.3) BS02 rna ? GO:0000027 ... P62399 27842381
    375066 5lzb:F (5.3) BS03 rna ? GO:0000027 ... P62399 27842381
    375067 5lzb:G (5.3) BS01 rna ? GO:0000027 ... P0AG55 27842381
    375068 5lzb:H (5.3) BS01 rna ? GO:0002181 ... P0A7R1 27842381
    375069 5lzb:I (5.3) BS01 rna ? GO:0000027 ... P0A7J7 27842381
    375070 5lzb:I (5.3) BS02 rna ? GO:0000027 ... P0A7J7 27842381
    375071 5lzb:J (5.3) BS01 rna ? GO:0002181 ... P0AA10 27842381
    375072 5lzb:K (5.3) BS01 rna ? GO:0002181 ... P0ADY3 27842381
    375073 5lzb:K (5.3) BS02 rna ? GO:0002181 ... P0ADY3 27842381
    375074 5lzb:L (5.3) BS01 rna ? GO:0002181 ... P02413 27842381
    375075 5lzb:M (5.3) BS01 rna ? GO:0000027 ... P0ADY7 27842381
    375076 5lzb:N (5.3) BS01 rna ? GO:0000027 ... P0AG44 27842381
    375077 5lzb:O (5.3) BS01 rna ? GO:0002181 ... P0C018 27842381
    375078 5lzb:O (5.3) BS02 rna ? GO:0002181 ... P0C018 27842381
    375079 5lzb:P (5.3) BS01 rna ? GO:0000027 ... P0A7K6 27842381
    375080 5lzb:P (5.3) BS02 rna ? GO:0000027 ... P0A7K6 27842381
    375081 5lzb:Q (5.3) BS01 rna ? GO:0000027 ... P0A7L3 27842381
    375082 5lzb:R (5.3) BS01 rna ? GO:0002181 ... P0AG48 27842381
    375083 5lzb:S (5.3) BS01 rna ? GO:0002181 ... P61175 27842381
    375084 5lzb:T (5.3) BS01 rna ? GO:0000027 ... P0ADZ0 27842381
    375085 5lzb:U (5.3) BS01 rna ? GO:0000027 ... P60624 27842381
    375086 5lzb:V (5.3) BS01 rna ? GO:0000027 ... P68919 27842381
    375087 5lzb:V (5.3) BS02 rna ? GO:0000027 ... P68919 27842381
    375088 5lzb:W (5.3) BS01 rna ? GO:0003735 ... P0A7L8 27842381
    375089 5lzb:W (5.3) BS02 rna ? GO:0003735 ... P0A7L8 27842381
    375090 5lzb:X (5.3) BS01 rna ? GO:0000027 ... P0A7M2 27842381
    375091 5lzb:Y (5.3) BS01 rna ? GO:0000027 ... P0A7M6 27842381
    375092 5lzb:Z (5.3) BS01 rna ? GO:0000027 ... P0AG51 27842381
    375093 5lzb:b (5.3) BS01 rna ? GO:0000028 ... P0A7V0 27842381
    375094 5lzb:c (5.3) BS01 rna ? GO:0003676 ... P0A7V3 27842381
    375095 5lzb:c (5.3) BS02 rna ? GO:0003676 ... P0A7V3 27842381
    375096 5lzb:d (5.3) BS01 rna ? GO:0000028 ... P0A7V8 27842381
    375097 5lzb:e (5.3) BS01 rna ? GO:0000028 ... P0A7W1 27842381
    375098 5lzb:e (5.3) BS02 rna ? GO:0000028 ... P0A7W1 27842381
    375099 5lzb:f (5.3) BS01 rna ? GO:0003735 ... P02358 27842381
    375100 5lzb:g (5.3) BS01 rna ? GO:0003723 ... P02359 27842381
    375101 5lzb:h (5.3) BS01 rna ? GO:0000028 ... P0A7W7 27842381
    375102 5lzb:i (5.3) BS01 rna ? GO:0000049 ... P0A7X3 27842381
    375103 5lzb:i (5.3) BS02 rna ? GO:0000049 ... P0A7X3 27842381
    375104 5lzb:j (5.3) BS01 rna ? GO:0000049 ... P0A7R5 27842381
    375105 5lzb:k (5.3) BS01 rna ? GO:0002181 ... P0A7R9 27842381
    375106 5lzb:l (5.3) BS01 rna ? GO:0000049 ... P0A7S3 27842381
    375107 5lzb:m (5.3) BS01 rna ? GO:0000049 ... P0A7S9 27842381
    375108 5lzb:m (5.3) BS02 rna ? GO:0000049 ... P0A7S9 27842381
    375109 5lzb:n (5.3) BS01 rna ? GO:0000028 ... P0AG59 27842381
    375110 5lzb:o (5.3) BS01 rna ? GO:0000028 ... P0ADZ4 27842381
    375111 5lzb:o (5.3) BS02 rna ? GO:0000028 ... P0ADZ4 27842381
    375112 5lzb:p (5.3) BS01 rna ? GO:0000028 ... P0A7T3 27842381
    375113 5lzb:q (5.3) BS01 rna ? GO:0000028 ... P0AG63 27842381
    375114 5lzb:r (5.3) BS01 rna ? GO:0003735 ... P0A7T7 27842381
    375115 5lzb:s (5.3) BS01 rna ? GO:0003723 ... P0A7U3 27842381
    375116 5lzb:t (5.3) BS01 rna ? GO:0000028 ... P0A7U7 27842381
    375117 5lzb:u (5.3) BS01 rna ? GO:0000028 ... P68679 27842381
    375118 5lzb:z (5.3) BS01 rna ? GO:0000049 ... P14081 27842381
    375119 5lzb:z (5.3) BS02 rna ? GO:0000049 ... P14081 27842381
    375120 5lzb:z (5.3) BS03 rna ? GO:0000049 ... P14081 27842381
    375121 5lzb:z (5.3) BS04 SEC ? GO:0000049 ... P14081 27842381
    375122 5lzb:z (5.3) BS05 GNP ? GO:0000049 ... P14081 27842381
    375123 5lzb:z (5.3) BS06 MG ? GO:0000049 ... P14081 27842381
    375124 5lzc:0 (4.8) BS01 rna ? GO:0000027 ... P0A7N4 27842381
    375125 5lzc:1 (4.8) BS01 rna ? GO:0000027 ... P0A7N9 27842381
    375126 5lzc:2 (4.8) BS01 rna ? GO:0002181 ... P0A7P5 27842381
    375127 5lzc:3 (4.8) BS01 rna ? GO:0002181 ... P0A7Q1 27842381
    375128 5lzc:4 (4.8) BS01 rna ? GO:0002181 ... P0A7Q6 27842381
    375129 5lzc:4 (4.8) BS02 ZN ? GO:0002181 ... P0A7Q6 27842381
    375130 5lzc:6 (4.8) BS01 rna ? GO:0002181 ... P0A7M9 27842381
    375131 5lzc:6 (4.8) BS02 rna ? GO:0002181 ... P0A7M9 27842381
    375132 5lzc:6 (4.8) BS03 ZN ? GO:0002181 ... P0A7M9 27842381
    375133 5lzc:C (4.8) BS01 rna ? GO:0000027 ... P60422 27842381
    375134 5lzc:D (4.8) BS01 rna ? GO:0000027 ... P60438 27842381
    375135 5lzc:E (4.8) BS01 rna ? GO:0001070 ... P60723 27842381
    375136 5lzc:F (4.8) BS01 rna ? GO:0000027 ... P62399 27842381
    375137 5lzc:F (4.8) BS02 rna ? GO:0000027 ... P62399 27842381
    375138 5lzc:F (4.8) BS03 rna ? GO:0000027 ... P62399 27842381
    375139 5lzc:G (4.8) BS01 rna ? GO:0000027 ... P0AG55 27842381
    375140 5lzc:H (4.8) BS01 rna ? GO:0002181 ... P0A7R1 27842381
    375141 5lzc:I (4.8) BS01 rna ? GO:0000027 ... P0A7J7 27842381
    375142 5lzc:J (4.8) BS01 rna ? GO:0002181 ... P0AA10 27842381
    375143 5lzc:K (4.8) BS01 rna ? GO:0002181 ... P0ADY3 27842381
    375144 5lzc:K (4.8) BS02 rna ? GO:0002181 ... P0ADY3 27842381
    375145 5lzc:L (4.8) BS01 rna ? GO:0002181 ... P02413 27842381
    375146 5lzc:M (4.8) BS01 rna ? GO:0000027 ... P0ADY7 27842381
    375147 5lzc:M (4.8) BS02 rna ? GO:0000027 ... P0ADY7 27842381
    375148 5lzc:N (4.8) BS01 rna ? GO:0000027 ... P0AG44 27842381
    375149 5lzc:O (4.8) BS01 rna ? GO:0002181 ... P0C018 27842381
    375150 5lzc:O (4.8) BS02 rna ? GO:0002181 ... P0C018 27842381
    375151 5lzc:P (4.8) BS01 rna ? GO:0000027 ... P0A7K6 27842381
    375152 5lzc:P (4.8) BS02 rna ? GO:0000027 ... P0A7K6 27842381
    375153 5lzc:Q (4.8) BS01 rna ? GO:0000027 ... P0A7L3 27842381
    375154 5lzc:R (4.8) BS01 rna ? GO:0002181 ... P0AG48 27842381
    375155 5lzc:S (4.8) BS01 rna ? GO:0002181 ... P61175 27842381
    375156 5lzc:T (4.8) BS01 rna ? GO:0000027 ... P0ADZ0 27842381
    375157 5lzc:U (4.8) BS01 rna ? GO:0000027 ... P60624 27842381
    375158 5lzc:V (4.8) BS01 rna ? GO:0000027 ... P68919 27842381
    375159 5lzc:V (4.8) BS02 rna ? GO:0000027 ... P68919 27842381
    375160 5lzc:W (4.8) BS01 rna ? GO:0003735 ... P0A7L8 27842381
    375161 5lzc:W (4.8) BS02 rna ? GO:0003735 ... P0A7L8 27842381
    375162 5lzc:X (4.8) BS01 rna ? GO:0000027 ... P0A7M2 27842381
    375163 5lzc:Y (4.8) BS01 rna ? GO:0000027 ... P0A7M6 27842381
    375164 5lzc:Z (4.8) BS01 rna ? GO:0000027 ... P0AG51 27842381
    375165 5lzc:b (4.8) BS01 rna ? GO:0000028 ... P0A7V0 27842381
    375166 5lzc:c (4.8) BS01 rna ? GO:0003676 ... P0A7V3 27842381
    375167 5lzc:c (4.8) BS02 rna ? GO:0003676 ... P0A7V3 27842381
    375168 5lzc:d (4.8) BS01 rna ? GO:0000028 ... P0A7V8 27842381
    375169 5lzc:e (4.8) BS01 rna ? GO:0000028 ... P0A7W1 27842381
    375170 5lzc:f (4.8) BS01 rna ? GO:0003735 ... P02358 27842381
    375171 5lzc:g (4.8) BS01 rna ? GO:0003723 ... P02359 27842381
    375172 5lzc:h (4.8) BS01 rna ? GO:0000028 ... P0A7W7 27842381
    375173 5lzc:i (4.8) BS01 rna ? GO:0000049 ... P0A7X3 27842381
    375174 5lzc:i (4.8) BS02 rna ? GO:0000049 ... P0A7X3 27842381
    375175 5lzc:j (4.8) BS01 rna ? GO:0000049 ... P0A7R5 27842381
    375176 5lzc:k (4.8) BS01 rna ? GO:0002181 ... P0A7R9 27842381
    375177 5lzc:l (4.8) BS01 rna ? GO:0000049 ... P0A7S3 27842381
    375178 5lzc:m (4.8) BS01 rna ? GO:0000049 ... P0A7S9 27842381
    375179 5lzc:m (4.8) BS02 rna ? GO:0000049 ... P0A7S9 27842381
    375180 5lzc:n (4.8) BS01 rna ? GO:0000028 ... P0AG59 27842381
    375181 5lzc:o (4.8) BS01 rna ? GO:0000028 ... P0ADZ4 27842381
    375182 5lzc:o (4.8) BS02 rna ? GO:0000028 ... P0ADZ4 27842381
    375183 5lzc:p (4.8) BS01 rna ? GO:0000028 ... P0A7T3 27842381
    375184 5lzc:q (4.8) BS01 rna ? GO:0000028 ... P0AG63 27842381
    375185 5lzc:r (4.8) BS01 rna ? GO:0003735 ... P0A7T7 27842381
    375186 5lzc:s (4.8) BS01 rna ? GO:0003723 ... P0A7U3 27842381
    375187 5lzc:t (4.8) BS01 rna ? GO:0000028 ... P0A7U7 27842381
    375188 5lzc:u (4.8) BS01 rna ? GO:0000028 ... P68679 27842381
    375189 5lzc:z (4.8) BS01 rna ? GO:0000049 ... P14081 27842381
    375190 5lzc:z (4.8) BS02 rna ? GO:0000049 ... P14081 27842381
    375191 5lzc:z (4.8) BS03 rna ? GO:0000049 ... P14081 27842381
    375192 5lzc:z (4.8) BS04 SEC ? GO:0000049 ... P14081 27842381
    375193 5lzc:z (4.8) BS05 GNP ? GO:0000049 ... P14081 27842381
    375194 5lzd:0 (3.4) BS01 rna ? GO:0000027 ... P0A7N4 27842381
    375195 5lzd:1 (3.4) BS01 rna ? GO:0000027 ... P0A7N9 27842381
    375196 5lzd:2 (3.4) BS01 rna ? GO:0002181 ... P0A7P5 27842381
    375197 5lzd:3 (3.4) BS01 rna ? GO:0002181 ... P0A7Q1 27842381
    375198 5lzd:4 (3.4) BS01 rna ? GO:0002181 ... P0A7Q6 27842381
    375199 5lzd:4 (3.4) BS02 ZN ? GO:0002181 ... P0A7Q6 27842381
    375200 5lzd:6 (3.4) BS01 rna ? GO:0002181 ... P0A7M9 27842381

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).