SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 1871 1872 1873 1874 1875 1876 1877 1878 1879 1880 1881 1882 1883 1884 1885 1886 1887 1888 1889 1890 1891 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    376001 5lzw:dd (3.53) BS01 rna ? GO:0002181 ... G1U7M4 27863242
    376002 5lzw:dd (3.53) BS02 ZN ? GO:0002181 ... G1U7M4 27863242
    376003 5lzw:e (3.53) BS01 rna ? GO:0003735 ... G1TUN8 27863242
    376004 5lzw:ee (3.53) BS01 rna ? GO:0003735 ... G1T8A2 27863242
    376005 5lzw:f (3.53) BS01 rna ? GO:0000049 ... G1SF08 27863242
    376006 5lzw:ff (3.53) BS01 rna ? GO:0003735 ... G1SK22 27863242
    376007 5lzw:g (3.53) BS01 rna ? GO:0003735 ... G1TXG5 27863242
    376008 5lzw:gg (3.53) BS01 rna ? GO:0001891 ... G1SJB4 27863242
    376009 5lzw:h (3.53) BS01 rna ? GO:0000463 ... G1SIT5 27863242
    376010 5lzw:h (3.53) BS02 rna ? GO:0000463 ... G1SIT5 27863242
    376011 5lzw:i (3.53) BS01 rna ? GO:0003735 ... G1TTQ5 27863242
    376012 5lzw:ii (3.53) BS01 rna ? GO:0001833 ... Q9BRX2 27863242
    376013 5lzw:ii (3.53) BS02 rna ? GO:0001833 ... Q9BRX2 27863242
    376014 5lzw:j (3.53) BS01 rna ? GO:0003723 ... U3KPD5 27863242
    376015 5lzw:j (3.53) BS02 rna ? GO:0003723 ... U3KPD5 27863242
    376016 5lzw:j (3.53) BS03 ZN ? GO:0003723 ... U3KPD5 27863242
    376017 5lzw:jj (3.53) BS01 MG 3.6.5.- GO:0003746 ... Q9Y450 27863242
    376018 5lzw:k (3.53) BS01 rna N/A GO:0003735 ... N/A 27863242
    376019 5lzw:l (3.53) BS01 rna ? GO:0003735 ... G1TTN1 27863242
    376020 5lzw:l (3.53) BS02 rna ? GO:0003735 ... G1TTN1 27863242
    376021 5lzw:m (3.53) BS01 rna N/A GO:0003735 ... N/A 27863242
    376022 5lzw:m (3.53) BS02 ZN N/A GO:0003735 ... N/A 27863242
    376023 5lzw:o (3.53) BS01 rna ? GO:0003735 ... G1T040 27863242
    376024 5lzw:o (3.53) BS02 rna ? GO:0003735 ... G1T040 27863242
    376025 5lzw:o (3.53) BS03 rna ? GO:0003735 ... G1T040 27863242
    376026 5lzw:o (3.53) BS04 ZN ? GO:0003735 ... G1T040 27863242
    376027 5lzw:p (3.53) BS01 rna ? GO:0003735 ... G1SY53 27863242
    376028 5lzw:p (3.53) BS02 ZN ? GO:0003735 ... G1SY53 27863242
    376029 5lzw:r (3.53) BS01 rna ? GO:0003735 ... G1U7L1 27863242
    376030 5lzw:s (3.53) BS01 rna N/A GO:0042254 ... N/A 27863242
    376031 5lzw:t (3.53) BS01 rna ? GO:0003723 ... G1SMR7 27863242
    376032 5lzx:A (3.67) BS01 rna N/A N/A N/A 27863242
    376033 5lzx:A (3.67) BS02 rna N/A N/A N/A 27863242
    376034 5lzx:AA (3.67) BS01 rna N/A N/A N/A 27863242
    376035 5lzx:B (3.67) BS01 rna ? GO:0003723 ... G1TL06 27863242
    376036 5lzx:BB (3.67) BS01 rna ? GO:0003735 ... G1SS70 27863242
    376037 5lzx:C (3.67) BS01 rna N/A N/A N/A 27863242
    376038 5lzx:C (3.67) BS02 rna N/A N/A N/A 27863242
    376039 5lzx:CC (3.67) BS01 rna N/A N/A N/A 27863242
    376040 5lzx:D (3.67) BS01 rna ? GO:0000027 ... P19949 27863242
    376041 5lzx:D (3.67) BS02 rna ? GO:0000027 ... P19949 27863242
    376042 5lzx:DD (3.67) BS01 rna 4.2.99.18 GO:0003677 ... G1TNM3 27863242
    376043 5lzx:E (3.67) BS01 rna ? GO:0000027 ... G1SKF7 27863242
    376044 5lzx:EE (3.67) BS01 rna N/A N/A N/A 27863242
    376045 5lzx:F (3.67) BS01 rna ? GO:0000463 ... G1TUB1 27863242
    376046 5lzx:F (3.67) BS02 rna ? GO:0000463 ... G1TUB1 27863242
    376047 5lzx:FF (3.67) BS01 rna ? GO:0003735 ... G1TFM5 27863242
    376048 5lzx:FF (3.67) BS02 rna ? GO:0003735 ... G1TFM5 27863242
    376049 5lzx:G (3.67) BS01 rna ? GO:0005737 ... G1STW0 27863242
    376050 5lzx:G (3.67) BS02 rna ? GO:0005737 ... G1STW0 27863242
    376051 5lzx:GG (3.67) BS01 rna ? GO:0003735 ... G1TM55 27863242
    376052 5lzx:H (3.67) BS01 rna ? GO:0002181 ... G1SWI6 27863242
    376053 5lzx:HH (3.67) BS01 rna ? GO:0003735 ... G1SVB0 27863242
    376054 5lzx:I (3.67) BS01 rna ? GO:0005737 ... B7NZQ2 27863242
    376055 5lzx:I (3.67) BS02 rna ? GO:0005737 ... B7NZQ2 27863242
    376056 5lzx:II (3.67) BS01 rna N/A N/A N/A 27863242
    376057 5lzx:II (3.67) BS02 rna N/A N/A N/A 27863242
    376058 5lzx:J (3.67) BS01 rna ? GO:0005634 ... G1TUB8 27863242
    376059 5lzx:J (3.67) BS02 rna ? GO:0005634 ... G1TUB8 27863242
    376060 5lzx:J (3.67) BS03 rna ? GO:0005634 ... G1TUB8 27863242
    376061 5lzx:JJ (3.67) BS01 rna ? GO:0003735 ... B7NZS8 27863242
    376062 5lzx:KK (3.67) BS01 rna ? GO:0003723 ... G1TPV3 27863242
    376063 5lzx:L (3.67) BS01 rna N/A N/A N/A 27863242
    376064 5lzx:L (3.67) BS02 rna N/A N/A N/A 27863242
    376065 5lzx:LL (3.67) BS01 rna ? GO:0003735 ... G1TRM4 27863242
    376066 5lzx:M (3.67) BS01 rna ? GO:0003723 ... G1SZ12 27863242
    376067 5lzx:MM (3.67) BS01 rna ? GO:0003735 ... G1SFR8 27863242
    376068 5lzx:N (3.67) BS01 rna ? GO:0002181 ... G1T0C1 27863242
    376069 5lzx:N (3.67) BS02 rna ? GO:0002181 ... G1T0C1 27863242
    376070 5lzx:NN (3.67) BS01 rna ? GO:0003735 ... G1SP51 27863242
    376071 5lzx:O (3.67) BS01 rna N/A N/A N/A 27863242
    376072 5lzx:OO (3.67) BS01 rna ? GO:0005634 ... G1T1F0 27863242
    376073 5lzx:P (3.67) BS01 rna ? GO:0002181 ... G1SCJ6 27863242
    376074 5lzx:P (3.67) BS02 rna ? GO:0002181 ... G1SCJ6 27863242
    376075 5lzx:PP (3.67) BS01 rna ? GO:0000028 ... G1U0Q2 27863242
    376076 5lzx:Q (3.67) BS01 rna N/A N/A N/A 27863242
    376077 5lzx:QQ (3.67) BS01 rna ? GO:0000462 ... G1SGX4 27863242
    376078 5lzx:R (3.67) BS01 rna N/A N/A N/A 27863242
    376079 5lzx:R (3.67) BS02 rna N/A N/A N/A 27863242
    376080 5lzx:RR (3.67) BS01 rna ? GO:0003735 ... G1TU13 27863242
    376081 5lzx:S (3.67) BS01 rna N/A N/A N/A 27863242
    376082 5lzx:S (3.67) BS02 rna N/A N/A N/A 27863242
    376083 5lzx:SS (3.67) BS01 rna ? GO:0003735 ... G1TPG3 27863242
    376084 5lzx:T (3.67) BS01 rna ? GO:0005737 ... G1SHQ2 27863242
    376085 5lzx:T (3.67) BS02 rna ? GO:0005737 ... G1SHQ2 27863242
    376086 5lzx:TT (3.67) BS01 rna ? GO:0000028 ... G1TN62 27863242
    376087 5lzx:U (3.67) BS01 rna N/A N/A N/A 27863242
    376088 5lzx:UU (3.67) BS01 rna ? GO:0003735 ... G1SIZ2 27863242
    376089 5lzx:V (3.67) BS01 rna ? GO:0003735 ... G1T6D1 27863242
    376090 5lzx:W (3.67) BS01 rna ? GO:0000027 ... G1SE28 27863242
    376091 5lzx:WW (3.67) BS01 rna ? GO:0003735 ... G1TG89 27863242
    376092 5lzx:X (3.67) BS01 rna ? GO:0005634 ... G1SE76 27863242
    376093 5lzx:X (3.67) BS02 rna ? GO:0005634 ... G1SE76 27863242
    376094 5lzx:XX (3.67) BS01 rna N/A N/A N/A 27863242
    376095 5lzx:Y (3.67) BS01 rna ? GO:0005737 ... G1SQH0 27863242
    376096 5lzx:Y (3.67) BS02 rna ? GO:0005737 ... G1SQH0 27863242
    376097 5lzx:YY (3.67) BS01 rna N/A N/A N/A 27863242
    376098 5lzx:Z (3.67) BS01 rna ? GO:0005737 ... G1TXF6 27863242
    376099 5lzx:ZZ (3.67) BS01 rna ? GO:0003735 ... G1TDB3 27863242
    376100 5lzx:a (3.67) BS01 rna ? GO:0003735 ... G1SNY0 27863242
    376101 5lzx:aa (3.67) BS01 rna N/A N/A N/A 27863242
    376102 5lzx:aa (3.67) BS02 ZN N/A N/A N/A 27863242
    376103 5lzx:b (3.67) BS01 rna ? GO:0002181 ... G1SGR6 27863242
    376104 5lzx:bb (3.67) BS01 rna ? GO:0003735 ... G1TZ76 27863242
    376105 5lzx:c (3.67) BS01 rna ? GO:0002181 ... G1TDL2 27863242
    376106 5lzx:cc (3.67) BS01 rna ? GO:0000028 ... G1TIB4 27863242
    376107 5lzx:d (3.67) BS01 rna ? GO:0002181 ... G1SHG0 27863242
    376108 5lzx:dd (3.67) BS01 rna ? GO:0002181 ... G1U7M4 27863242
    376109 5lzx:dd (3.67) BS02 ZN ? GO:0002181 ... G1U7M4 27863242
    376110 5lzx:e (3.67) BS01 rna ? GO:0005737 ... G1TUN8 27863242
    376111 5lzx:ee (3.67) BS01 rna ? GO:0005634 ... G1T8A2 27863242
    376112 5lzx:f (3.67) BS01 rna ? GO:0000049 ... G1SF08 27863242
    376113 5lzx:ff (3.67) BS01 rna ? GO:0003735 ... G1SK22 27863242
    376114 5lzx:ff (3.67) BS02 ZN ? GO:0003735 ... G1SK22 27863242
    376115 5lzx:g (3.67) BS01 rna N/A N/A N/A 27863242
    376116 5lzx:gg (3.67) BS01 rna ? GO:0001891 ... G1SJB4 27863242
    376117 5lzx:h (3.67) BS01 rna ? GO:0000463 ... G1SIT5 27863242
    376118 5lzx:h (3.67) BS02 rna ? GO:0000463 ... G1SIT5 27863242
    376119 5lzx:i (3.67) BS01 rna ? GO:0005737 ... G1TTQ5 27863242
    376120 5lzx:ii (3.67) BS01 rna 3.1.-.- GO:0001833 ... Q9BRX2 27863242
    376121 5lzx:ii (3.67) BS02 rna 3.1.-.- GO:0001833 ... Q9BRX2 27863242
    376122 5lzx:j (3.67) BS01 rna ? GO:0003723 ... U3KPD5 27863242
    376123 5lzx:j (3.67) BS02 rna ? GO:0003723 ... U3KPD5 27863242
    376124 5lzx:j (3.67) BS03 ZN ? GO:0003723 ... U3KPD5 27863242
    376125 5lzx:jj (3.67) BS01 MG 3.6.5.- GO:0003746 ... Q9Y450 27863242
    376126 5lzx:k (3.67) BS01 rna N/A N/A N/A 27863242
    376127 5lzx:l (3.67) BS01 rna ? GO:0005840 ... G1TTN1 27863242
    376128 5lzx:l (3.67) BS02 rna ? GO:0005840 ... G1TTN1 27863242
    376129 5lzx:m (3.67) BS01 rna N/A N/A N/A 27863242
    376130 5lzx:m (3.67) BS02 ZN N/A N/A N/A 27863242
    376131 5lzx:o (3.67) BS01 rna ? GO:0005737 ... G1T040 27863242
    376132 5lzx:o (3.67) BS02 rna ? GO:0005737 ... G1T040 27863242
    376133 5lzx:o (3.67) BS03 rna ? GO:0005737 ... G1T040 27863242
    376134 5lzx:o (3.67) BS04 ZN ? GO:0005737 ... G1T040 27863242
    376135 5lzx:p (3.67) BS01 rna ? GO:0005737 ... G1SY53 27863242
    376136 5lzx:p (3.67) BS02 ZN ? GO:0005737 ... G1SY53 27863242
    376137 5lzx:r (3.67) BS01 rna ? GO:0005737 ... G1U7L1 27863242
    376138 5lzx:s (3.67) BS01 rna N/A N/A N/A 27863242
    376139 5lzx:t (3.67) BS01 rna ? GO:0003723 ... G1SMR7 27863242
    376140 5lzy:A (3.99) BS01 rna ? GO:0002181 ... G1TT27 27863242
    376141 5lzy:A (3.99) BS02 rna ? GO:0002181 ... G1TT27 27863242
    376142 5lzy:AA (3.99) BS01 rna N/A N/A N/A 27863242
    376143 5lzy:B (3.99) BS01 rna ? GO:0003723 ... G1TL06 27863242
    376144 5lzy:BB (3.99) BS01 rna ? GO:0003735 ... G1SS70 27863242
    376145 5lzy:C (3.99) BS01 rna N/A N/A N/A 27863242
    376146 5lzy:C (3.99) BS02 rna N/A N/A N/A 27863242
    376147 5lzy:CC (3.99) BS01 rna N/A N/A N/A 27863242
    376148 5lzy:D (3.99) BS01 rna ? GO:0000027 ... P19949 27863242
    376149 5lzy:D (3.99) BS02 rna ? GO:0000027 ... P19949 27863242
    376150 5lzy:DD (3.99) BS01 rna 4.2.99.18 GO:0003677 ... G1TNM3 27863242
    376151 5lzy:E (3.99) BS01 rna ? GO:0000027 ... G1SKF7 27863242
    376152 5lzy:EE (3.99) BS01 rna N/A N/A N/A 27863242
    376153 5lzy:F (3.99) BS01 rna ? GO:0000463 ... G1TUB1 27863242
    376154 5lzy:F (3.99) BS02 rna ? GO:0000463 ... G1TUB1 27863242
    376155 5lzy:FF (3.99) BS01 rna ? GO:0003735 ... G1TFM5 27863242
    376156 5lzy:FF (3.99) BS02 rna ? GO:0003735 ... G1TFM5 27863242
    376157 5lzy:G (3.99) BS01 rna ? GO:0005737 ... G1STW0 27863242
    376158 5lzy:G (3.99) BS02 rna ? GO:0005737 ... G1STW0 27863242
    376159 5lzy:GG (3.99) BS01 rna ? GO:0003735 ... G1TM55 27863242
    376160 5lzy:H (3.99) BS01 rna ? GO:0002181 ... G1SWI6 27863242
    376161 5lzy:HH (3.99) BS01 rna ? GO:0003735 ... G1SVB0 27863242
    376162 5lzy:I (3.99) BS01 rna ? GO:0005737 ... B7NZQ2 27863242
    376163 5lzy:I (3.99) BS02 rna ? GO:0005737 ... B7NZQ2 27863242
    376164 5lzy:II (3.99) BS01 rna N/A N/A N/A 27863242
    376165 5lzy:II (3.99) BS02 rna N/A N/A N/A 27863242
    376166 5lzy:J (3.99) BS01 rna ? GO:0005634 ... G1TUB8 27863242
    376167 5lzy:J (3.99) BS02 rna ? GO:0005634 ... G1TUB8 27863242
    376168 5lzy:J (3.99) BS03 rna ? GO:0005634 ... G1TUB8 27863242
    376169 5lzy:JJ (3.99) BS01 rna ? GO:0003735 ... B7NZS8 27863242
    376170 5lzy:KK (3.99) BS01 rna ? GO:0003723 ... G1TPV3 27863242
    376171 5lzy:L (3.99) BS01 rna N/A N/A N/A 27863242
    376172 5lzy:L (3.99) BS02 rna N/A N/A N/A 27863242
    376173 5lzy:LL (3.99) BS01 rna ? GO:0003735 ... G1TRM4 27863242
    376174 5lzy:M (3.99) BS01 rna ? GO:0003723 ... G1SZ12 27863242
    376175 5lzy:MM (3.99) BS01 rna ? GO:0003735 ... G1SFR8 27863242
    376176 5lzy:N (3.99) BS01 rna ? GO:0002181 ... G1T0C1 27863242
    376177 5lzy:N (3.99) BS02 rna ? GO:0002181 ... G1T0C1 27863242
    376178 5lzy:NN (3.99) BS01 rna ? GO:0003735 ... G1SP51 27863242
    376179 5lzy:NN (3.99) BS02 rna ? GO:0003735 ... G1SP51 27863242
    376180 5lzy:O (3.99) BS01 rna N/A N/A N/A 27863242
    376181 5lzy:OO (3.99) BS01 rna ? GO:0005634 ... G1T1F0 27863242
    376182 5lzy:P (3.99) BS01 rna ? GO:0002181 ... G1SCJ6 27863242
    376183 5lzy:P (3.99) BS02 rna ? GO:0002181 ... G1SCJ6 27863242
    376184 5lzy:PP (3.99) BS01 rna ? GO:0000028 ... G1U0Q2 27863242
    376185 5lzy:Q (3.99) BS01 rna N/A N/A N/A 27863242
    376186 5lzy:QQ (3.99) BS01 rna ? GO:0000462 ... G1SGX4 27863242
    376187 5lzy:R (3.99) BS01 rna N/A N/A N/A 27863242
    376188 5lzy:R (3.99) BS02 rna N/A N/A N/A 27863242
    376189 5lzy:RR (3.99) BS01 rna ? GO:0003735 ... G1TU13 27863242
    376190 5lzy:S (3.99) BS01 rna N/A N/A N/A 27863242
    376191 5lzy:S (3.99) BS02 rna N/A N/A N/A 27863242
    376192 5lzy:SS (3.99) BS01 rna ? GO:0003735 ... G1TPG3 27863242
    376193 5lzy:T (3.99) BS01 rna ? GO:0005737 ... G1SHQ2 27863242
    376194 5lzy:T (3.99) BS02 rna ? GO:0005737 ... G1SHQ2 27863242
    376195 5lzy:TT (3.99) BS01 rna ? GO:0000028 ... G1TN62 27863242
    376196 5lzy:U (3.99) BS01 rna N/A N/A N/A 27863242
    376197 5lzy:UU (3.99) BS01 rna ? GO:0003735 ... G1SIZ2 27863242
    376198 5lzy:V (3.99) BS01 rna ? GO:0003735 ... G1T6D1 27863242
    376199 5lzy:W (3.99) BS01 rna ? GO:0000027 ... G1SE28 27863242
    376200 5lzy:WW (3.99) BS01 rna ? GO:0003735 ... G1TG89 27863242

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).