SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    377001 5m5c:E (4.8) BS01 GDP ? GO:0000226 ... Q6B856 28991265
    377002 5m5c:E (4.8) BS02 TA1 ? GO:0000226 ... Q6B856 28991265
    377003 5m5d:A (1.07) BS01 DGO ? GO:0004559 ... D6D1V7 27992199
    377004 5m5d:A (1.07) BS02 MAN ? GO:0004559 ... D6D1V7 27992199
    377005 5m5e:B (2.3) BS01 FUC ? GO:0004896 ... P14784 28405498
    377006 5m5e:B (2.3) BS02 MAN ? GO:0004896 ... P14784 28405498
    377007 5m5e:B (2.3) BS03 CYS ? GO:0004896 ... P14784 28405498
    377008 5m5f:E (1.33) BS01 ZN 3.4.24.27 GO:0004222 ... P00800 28696673
    377009 5m5f:E (1.33) BS02 CA 3.4.24.27 GO:0004222 ... P00800 28696673
    377010 5m5f:E (1.33) BS03 CA 3.4.24.27 GO:0004222 ... P00800 28696673
    377011 5m5f:E (1.33) BS04 CA 3.4.24.27 GO:0004222 ... P00800 28696673
    377012 5m5f:E (1.33) BS05 CA 3.4.24.27 GO:0004222 ... P00800 28696673
    377013 5m5f:E (1.33) BS06 7GR 3.4.24.27 GO:0004222 ... P00800 28696673 MOAD: Kd=5.7mM
    377014 5m5g:A (2.27) BS01 peptide ? GO:0005634 ... G0S8H7 28008037
    377015 5m5g:B (2.27) BS01 peptide ? GO:0006338 ... G0SDW4 28008037
    377016 5m5g:B (2.27) BS02 peptide ? GO:0006338 ... G0SDW4 28008037
    377017 5m5g:B (2.27) BS03 ZN ? GO:0006338 ... G0SDW4 28008037
    377018 5m5g:B (2.27) BS04 ZN ? GO:0006338 ... G0SDW4 28008037
    377019 5m5g:B (2.27) BS05 ZN ? GO:0006338 ... G0SDW4 28008037
    377020 5m5g:B (2.27) BS06 ZN ? GO:0006338 ... G0SDW4 28008037
    377021 5m5g:B (2.27) BS07 ZN ? GO:0006338 ... G0SDW4 28008037
    377022 5m5g:B (2.27) BS08 ZN ? GO:0006338 ... G0SDW4 28008037
    377023 5m5g:B (2.27) BS09 ZN ? GO:0006338 ... G0SDW4 28008037
    377024 5m5g:B (2.27) BS10 ZN ? GO:0006338 ... G0SDW4 28008037
    377025 5m5g:B (2.27) BS11 SAH ? GO:0006338 ... G0SDW4 28008037
    377026 5m5i:B (9.3) BS01 GDP ? GO:0000226 ... Q6B856 27834216
    377027 5m5i:B (9.3) BS02 TA1 ? GO:0000226 ... Q6B856 27834216
    377028 5m5i:C (9.3) BS01 ANP ? GO:0003777 ... P24339 27834216
    377029 5m5j:A (2.65) BS01 FAD 1.8.1.9 GO:0000166 ... E2RU27 28477573
    377030 5m5j:B (2.65) BS01 FAD 1.8.1.9 GO:0000166 ... E2RU27 28477573
    377031 5m5k:A (1.84) BS01 NAD 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377032 5m5k:A (1.84) BS02 ADN 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377033 5m5k:A (1.84) BS03 NA 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377034 5m5k:A (1.84) BS04 NAD 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377035 5m5k:B (1.84) BS01 NAD 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377036 5m5k:B (1.84) BS02 NAD 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377037 5m5k:B (1.84) BS03 ADN 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377038 5m5k:B (1.84) BS04 NA 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377039 5m5k:C (1.84) BS01 NAD 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377040 5m5k:C (1.84) BS02 ADN 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377041 5m5k:C (1.84) BS03 NA 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377042 5m5k:C (1.84) BS04 NAD 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377043 5m5k:D (1.84) BS01 NAD 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377044 5m5k:D (1.84) BS02 NAD 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377045 5m5k:D (1.84) BS03 3AD 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377046 5m5l:B (9.3) BS01 GDP ? GO:0000226 ... Q6B856 27834216
    377047 5m5l:B (9.3) BS02 TA1 ? GO:0000226 ... Q6B856 27834216
    377048 5m5l:C (9.3) BS01 ANP ? GO:0003777 ... P24339 27834216
    377049 5m5m:B (9.3) BS01 GDP ? GO:0000226 ... Q6B856 27834216
    377050 5m5m:B (9.3) BS02 TA1 ? GO:0000226 ... Q6B856 27834216
    377051 5m5m:C (9.3) BS01 ANP ? GO:0003777 ... P24339 27834216
    377052 5m5n:B (9.3) BS01 GDP ? GO:0000226 ... Q6B856 27834216
    377053 5m5n:B (9.3) BS02 TA1 ? GO:0000226 ... Q6B856 27834216
    377054 5m5n:C (9.3) BS01 ANP ? GO:0003777 ... P24339 27834216
    377055 5m5o:B (9.3) BS01 GDP ? GO:0000226 ... Q6B856 27834216
    377056 5m5o:B (9.3) BS02 TA1 ? GO:0000226 ... Q6B856 27834216
    377057 5m5o:C (9.3) BS01 ANP ? GO:0003777 ... P24339 27834216
    377058 5m5q:A (2.2) BS01 ZN 3.4.-.- GO:0008233 ... Q92905 27981705
    377059 5m5q:A (2.2) BS02 7K1 3.4.-.- GO:0008233 ... Q92905 27981705 MOAD: ic50=0.09uM
    BindingDB: IC50=60nM
    377060 5m5r:A (1.76) BS01 peptide ? GO:0005198 ... P49951 27813245
    377061 5m5r:A (1.76) BS02 peptide ? GO:0005198 ... P49951 27813245
    377062 5m5s:A (1.88) BS01 peptide ? GO:0005198 ... P49951 27813245
    377063 5m5s:A (1.88) BS02 peptide ? GO:0005198 ... P49951 27813245
    377064 5m5s:B (1.88) BS01 peptide ? GO:0005198 ... P49951 27813245
    377065 5m5s:B (1.88) BS02 peptide ? GO:0005198 ... P49951 27813245
    377066 5m5t:A (1.7) BS01 peptide ? GO:0005198 ... P49951 27813245
    377067 5m5t:A (1.7) BS02 peptide ? GO:0005198 ... P49951 27813245
    377068 5m5t:A (1.7) BS03 peptide ? GO:0005198 ... P49951 27813245
    377069 5m5t:B (1.7) BS01 peptide ? GO:0005198 ... P49951 27813245
    377070 5m5t:B (1.7) BS02 peptide ? GO:0005198 ... P49951 27813245
    377071 5m5t:B (1.7) BS03 peptide ? GO:0005198 ... P49951 27813245
    377072 5m5u:A (2.15) BS01 peptide ? GO:0005198 ... P49951 27813245
    377073 5m5u:A (2.15) BS02 peptide ? GO:0005198 ... P49951 27813245
    377074 5m5u:B (2.15) BS01 peptide ? GO:0005198 ... P49951 27813245
    377075 5m5u:B (2.15) BS02 peptide ? GO:0005198 ... P49951 27813245
    377076 5m5v:A (1.96) BS01 peptide ? GO:0005198 ... P49951 27813245
    377077 5m5v:A (1.96) BS02 peptide ? GO:0005198 ... P49951 27813245
    377078 5m5v:A (1.96) BS03 peptide ? GO:0005198 ... P49951 27813245
    377079 5m5v:B (1.96) BS01 peptide ? GO:0005198 ... P49951 27813245
    377080 5m5v:B (1.96) BS02 peptide ? GO:0005198 ... P49951 27813245
    377081 5m5v:B (1.96) BS03 peptide ? GO:0005198 ... P49951 27813245
    377082 5m5w:A (3.8) BS01 dna 2.7.7.6 GO:0000428 ... P10964 27867008
    377083 5m5w:A (3.8) BS02 dna 2.7.7.6 GO:0000428 ... P10964 27867008
    377084 5m5w:A (3.8) BS03 ZN 2.7.7.6 GO:0000428 ... P10964 27867008
    377085 5m5w:A (3.8) BS04 ZN 2.7.7.6 GO:0000428 ... P10964 27867008
    377086 5m5w:B (3.8) BS01 dna 2.7.7.6 GO:0000428 ... P22138 27867008
    377087 5m5w:B (3.8) BS02 ZN 2.7.7.6 GO:0000428 ... P22138 27867008
    377088 5m5w:J (3.8) BS01 ZN ? GO:0000428 ... P22139 27867008
    377089 5m5w:L (3.8) BS01 ZN ? GO:0000428 ... P40422 27867008
    377090 5m5x:A (4.0) BS01 rna 2.7.7.6 GO:0000428 ... P10964 27867008
    377091 5m5x:A (4.0) BS02 dna 2.7.7.6 GO:0000428 ... P10964 27867008
    377092 5m5x:A (4.0) BS03 dna 2.7.7.6 GO:0000428 ... P10964 27867008
    377093 5m5x:A (4.0) BS04 ZN 2.7.7.6 GO:0000428 ... P10964 27867008
    377094 5m5x:A (4.0) BS05 ZN 2.7.7.6 GO:0000428 ... P10964 27867008
    377095 5m5x:B (4.0) BS01 rna 2.7.7.6 GO:0000428 ... P22138 27867008
    377096 5m5x:B (4.0) BS02 dna 2.7.7.6 GO:0000428 ... P22138 27867008
    377097 5m5x:B (4.0) BS03 dna 2.7.7.6 GO:0000428 ... P22138 27867008
    377098 5m5x:B (4.0) BS04 ZN 2.7.7.6 GO:0000428 ... P22138 27867008
    377099 5m5x:I (4.0) BS01 ZN ? GO:0000122 ... P32529 27867008
    377100 5m5x:J (4.0) BS01 ZN ? GO:0000428 ... P22139 27867008
    377101 5m5x:L (4.0) BS01 ZN ? GO:0000428 ... P40422 27867008
    377102 5m5y:A (4.0) BS01 dna 2.7.7.6 GO:0000428 ... P10964 27867008
    377103 5m5y:A (4.0) BS02 ZN 2.7.7.6 GO:0000428 ... P10964 27867008
    377104 5m5y:A (4.0) BS03 ZN 2.7.7.6 GO:0000428 ... P10964 27867008
    377105 5m5y:B (4.0) BS01 rna 2.7.7.6 GO:0000428 ... P22138 27867008
    377106 5m5y:B (4.0) BS02 dna 2.7.7.6 GO:0000428 ... P22138 27867008
    377107 5m5y:B (4.0) BS03 dna 2.7.7.6 GO:0000428 ... P22138 27867008
    377108 5m5y:B (4.0) BS04 ZN 2.7.7.6 GO:0000428 ... P22138 27867008
    377109 5m5y:J (4.0) BS01 ZN ? GO:0000428 ... P22139 27867008
    377110 5m5y:L (4.0) BS01 ZN ? GO:0000428 ... P40422 27867008
    377111 5m60:A (1.5) BS01 BGC ? GO:0004650 ... G0S3N2 28479293
    377112 5m61:A (1.84) BS01 peptide ? GO:0005198 ... P49951 27813245
    377113 5m61:A (1.84) BS02 peptide ? GO:0005198 ... P49951 27813245
    377114 5m61:B (1.84) BS01 peptide ? GO:0005198 ... P49951 27813245
    377115 5m61:B (1.84) BS02 peptide ? GO:0005198 ... P49951 27813245
    377116 5m61:B (1.84) BS03 peptide ? GO:0005198 ... P49951 27813245
    377117 5m62:A (1.7) BS01 CA ? N/A Q8VBX4 27903635
    377118 5m62:A (1.7) BS02 BGC ? N/A Q8VBX4 27903635
    377119 5m62:B (1.7) BS01 CA ? N/A Q8VBX4 27903635
    377120 5m62:B (1.7) BS02 GLC ? N/A Q8VBX4 27903635
    377121 5m62:B (1.7) BS03 BGC ? N/A Q8VBX4 27903635
    377122 5m63:H (2.74) BS01 SIA N/A N/A N/A 28439022
    377123 5m63:L (2.74) BS01 SIA N/A N/A N/A 28439022
    377124 5m63:M (2.74) BS01 SIA N/A N/A N/A 28439022
    377125 5m63:N (2.74) BS01 SIA N/A N/A N/A 28439022
    377126 5m64:A (4.6) BS01 dna 2.7.7.6 GO:0000428 ... P10964 27867008
    377127 5m64:A (4.6) BS02 dna 2.7.7.6 GO:0000428 ... P10964 27867008
    377128 5m64:A (4.6) BS03 rna 2.7.7.6 GO:0000428 ... P10964 27867008
    377129 5m64:A (4.6) BS04 ZN 2.7.7.6 GO:0000428 ... P10964 27867008
    377130 5m64:A (4.6) BS05 ZN 2.7.7.6 GO:0000428 ... P10964 27867008
    377131 5m64:B (4.6) BS01 dna 2.7.7.6 GO:0000428 ... P22138 27867008
    377132 5m64:B (4.6) BS02 dna 2.7.7.6 GO:0000428 ... P22138 27867008
    377133 5m64:B (4.6) BS03 rna 2.7.7.6 GO:0000428 ... P22138 27867008
    377134 5m64:B (4.6) BS04 ZN 2.7.7.6 GO:0000428 ... P22138 27867008
    377135 5m64:J (4.6) BS01 ZN ? GO:0000428 ... P22139 27867008
    377136 5m64:L (4.6) BS01 ZN ? GO:0000428 ... P40422 27867008
    377137 5m65:A (1.945) BS01 NAD 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377138 5m65:A (1.945) BS02 ADE 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377139 5m65:A (1.945) BS03 NA 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377140 5m65:A (1.945) BS04 NAD 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377141 5m65:B (1.945) BS01 NAD 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377142 5m65:B (1.945) BS02 NAD 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377143 5m65:B (1.945) BS03 ADE 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377144 5m65:B (1.945) BS04 NA 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377145 5m66:A (1.951) BS01 NAD 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377146 5m66:A (1.951) BS02 ADN 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377147 5m66:A (1.951) BS03 NA 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377148 5m66:A (1.951) BS04 NAD 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377149 5m66:B (1.951) BS01 NAD 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377150 5m66:B (1.951) BS02 NAD 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377151 5m66:B (1.951) BS03 ADN 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377152 5m66:B (1.951) BS04 NA 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377153 5m66:C (1.951) BS01 NAD 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377154 5m66:C (1.951) BS02 ADN 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377155 5m66:C (1.951) BS03 NA 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377156 5m66:C (1.951) BS04 NAD 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377157 5m66:D (1.951) BS01 NAD 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377158 5m66:D (1.951) BS02 NAD 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377159 5m66:D (1.951) BS03 ADN 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377160 5m66:D (1.951) BS04 NA 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377161 5m67:A (1.54) BS01 NA 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377162 5m67:A (1.54) BS02 NAD 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377163 5m67:A (1.54) BS03 ADE 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377164 5m67:A (1.54) BS04 NAD 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377165 5m67:B (1.54) BS01 NAD 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377166 5m67:B (1.54) BS02 NA 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377167 5m67:B (1.54) BS03 NAD 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377168 5m67:B (1.54) BS04 ADE 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377169 5m67:C (1.54) BS01 NA 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377170 5m67:C (1.54) BS02 NAD 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377171 5m67:C (1.54) BS03 3D1 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377172 5m67:C (1.54) BS04 NAD 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377173 5m67:D (1.54) BS01 NAD 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377174 5m67:D (1.54) BS02 NA 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377175 5m67:D (1.54) BS03 NAD 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377176 5m67:D (1.54) BS04 3D1 3.13.2.1 GO:0004013 ... A0A087WNH6 28512574
    377177 5m69:E (1.44) BS01 ZN 3.4.24.27 GO:0004222 ... P00800 28696673
    377178 5m69:E (1.44) BS02 CA 3.4.24.27 GO:0004222 ... P00800 28696673
    377179 5m69:E (1.44) BS03 CA 3.4.24.27 GO:0004222 ... P00800 28696673
    377180 5m69:E (1.44) BS04 CA 3.4.24.27 GO:0004222 ... P00800 28696673
    377181 5m69:E (1.44) BS05 CA 3.4.24.27 GO:0004222 ... P00800 28696673
    377182 5m69:E (1.44) BS06 7GR 3.4.24.27 GO:0004222 ... P00800 28696673 MOAD: Kd=5.7mM
    377183 5m6b:A (3.25) BS01 CU 1.14.18.1 GO:0004497 ... C7FF05 28500345
    377184 5m6b:A (3.25) BS02 CU 1.14.18.1 GO:0004497 ... C7FF05 28500345
    377185 5m6b:A (3.25) BS03 O 1.14.18.1 GO:0004497 ... C7FF05 28500345
    377186 5m6b:B (3.25) BS01 CU 1.14.18.1 GO:0004497 ... C7FF05 28500345
    377187 5m6b:B (3.25) BS02 CU 1.14.18.1 GO:0004497 ... C7FF05 28500345
    377188 5m6b:C (3.25) BS01 CU 1.14.18.1 GO:0004497 ... C7FF05 28500345
    377189 5m6b:C (3.25) BS02 CU 1.14.18.1 GO:0004497 ... C7FF05 28500345
    377190 5m6b:D (3.25) BS01 CU 1.14.18.1 GO:0004497 ... C7FF05 28500345
    377191 5m6b:D (3.25) BS02 CU 1.14.18.1 GO:0004497 ... C7FF05 28500345
    377192 5m6c:A (3.0) BS01 CA ? GO:0003779 ... P84074 28398555
    377193 5m6c:A (3.0) BS02 CA ? GO:0003779 ... P84074 28398555
    377194 5m6c:A (3.0) BS03 CA ? GO:0003779 ... P84074 28398555
    377195 5m6c:E (3.0) BS01 CA ? GO:0003779 ... P84074 28398555
    377196 5m6c:E (3.0) BS02 CA ? GO:0003779 ... P84074 28398555
    377197 5m6c:E (3.0) BS03 CA ? GO:0003779 ... P84074 28398555
    377198 5m6d:A (2.0) BS01 CA 1.2.1.- GO:0000166 ... I6L8L9 28011643
    377199 5m6e:A (2.32) BS01 ZN 2.3.2.27 N/A P98170 28492317
    377200 5m6e:A (2.32) BS02 7HT 2.3.2.27 N/A P98170 28492317

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).