SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    377201 5m6f:A (2.39) BS01 ZN 2.3.2.27 N/A P98170 28492317
    377202 5m6f:A (2.39) BS02 7HU 2.3.2.27 N/A P98170 28492317 MOAD: ic50=220nM
    377203 5m6g:A (1.829) BS01 MG 3.2.1.21 GO:0004553 ... A4FNP6 N/A
    377204 5m6g:A (1.829) BS02 MG 3.2.1.21 GO:0004553 ... A4FNP6 N/A
    377205 5m6g:A (1.829) BS03 MG 3.2.1.21 GO:0004553 ... A4FNP6 N/A
    377206 5m6g:A (1.829) BS04 MG 3.2.1.21 GO:0004553 ... A4FNP6 N/A
    377207 5m6g:A (1.829) BS05 MG 3.2.1.21 GO:0004553 ... A4FNP6 N/A
    377208 5m6g:A (1.829) BS06 SOR 3.2.1.21 GO:0004553 ... A4FNP6 N/A
    377209 5m6h:A (2.5) BS01 ZN 2.3.2.27 N/A P98170 28492317
    377210 5m6h:A (2.5) BS02 7J6 2.3.2.27 N/A P98170 28492317 MOAD: ic50=150nM
    377211 5m6j:A (1.7) BS01 HEM 1.7.6.1 GO:0005576 ... Q6PQK2 30022039
    377212 5m6k:A (1.6) BS01 HEM 1.7.6.1 GO:0005576 ... Q6PQK2 30022039
    377213 5m6l:A (2.61) BS01 ZN 2.3.2.27 N/A P98170 28492317
    377214 5m6l:A (2.61) BS02 7H9 2.3.2.27 N/A P98170 28492317
    377215 5m6m:A (2.37) BS01 ZN 2.3.2.27 N/A P98170 28492317
    377216 5m6m:A (2.37) BS02 7H8 2.3.2.27 N/A P98170 28492317 MOAD: ic50=44nM
    377217 5m6n:A (1.8) BS01 ZN 2.3.2.27 N/A Q13490 28492317
    377218 5m6n:A (1.8) BS02 7H9 2.3.2.27 N/A Q13490 28492317
    377219 5m6n:B (1.8) BS01 ZN 2.3.2.27 N/A Q13490 28492317
    377220 5m6n:B (1.8) BS02 7H9 2.3.2.27 N/A Q13490 28492317
    377221 5m6o:A (1.7) BS01 MAN ? GO:0030246 ... A0A2D0TC52 28684550
    377222 5m6o:B (1.7) BS01 MAN ? GO:0030246 ... A0A2D0TC52 28684550
    377223 5m6o:C (1.7) BS01 MAN ? GO:0030246 ... A0A2D0TC52 28684550
    377224 5m6o:D (1.7) BS01 MAN ? GO:0030246 ... A0A2D0TC52 28684550
    377225 5m6r:A (2.73) BS01 7J8 2.5.1.61 GO:0004418 ... P08397 29908816
    377226 5m6r:B (2.73) BS01 7J8 2.5.1.61 GO:0004418 ... P08397 29908816
    377227 5m6u:A (2.85) BS01 7KA 2.7.1.137
    2.7.1.153
    GO:0001779 ... O00329 28105286 BindingDB: IC50=4.7nM
    377228 5m6v:A (1.418) BS01 peptide 2.7.11.11 GO:0000287 ... P25321 N/A
    377229 5m6v:A (1.418) BS02 H52 2.7.11.11 GO:0000287 ... P25321 N/A
    377230 5m6x:B (2.4) BS01 MG 3.6.5.2 GO:0000902 ... P61586 28498638
    377231 5m6x:B (2.4) BS02 GDP 3.6.5.2 GO:0000902 ... P61586 28498638
    377232 5m6x:B (2.4) BS03 MGF 3.6.5.2 GO:0000902 ... P61586 28498638
    377233 5m6x:I (2.4) BS01 MG 3.6.5.2 GO:0000902 ... P61586 28498638
    377234 5m6x:I (2.4) BS02 GDP 3.6.5.2 GO:0000902 ... P61586 28498638
    377235 5m6x:I (2.4) BS03 MGF 3.6.5.2 GO:0000902 ... P61586 28498638
    377236 5m6y:A (1.367) BS01 peptide 2.7.11.11 GO:0000287 ... P25321 N/A
    377237 5m6y:A (1.367) BS02 7KB 2.7.11.11 GO:0000287 ... P25321 N/A
    377238 5m6z:A (1.67) BS01 ADP 2.7.2.3 GO:0004618 ... P00558 29995887
    377239 5m6z:A (1.67) BS02 MG 2.7.2.3 GO:0004618 ... P00558 29995887
    377240 5m70:B (2.2) BS01 MG 3.6.5.2 GO:0000902 ... P61586 28498638
    377241 5m70:B (2.2) BS02 GDP 3.6.5.2 GO:0000902 ... P61586 28498638
    377242 5m70:B (2.2) BS03 ALF 3.6.5.2 GO:0000902 ... P61586 28498638
    377243 5m70:G (2.2) BS01 MG 3.6.5.2 GO:0000902 ... P61586 28498638
    377244 5m70:G (2.2) BS02 GDP 3.6.5.2 GO:0000902 ... P61586 28498638
    377245 5m70:G (2.2) BS03 ALF 3.6.5.2 GO:0000902 ... P61586 28498638
    377246 5m71:A (1.488) BS01 peptide 2.7.11.11 GO:0000287 ... P25321 N/A
    377247 5m71:A (1.488) BS02 7K7 2.7.11.11 GO:0000287 ... P25321 N/A
    377248 5m72:A (1.6) BS01 peptide ? GO:0006614 ... O76094 27899666
    377249 5m73:B (3.4) BS01 rna ? GO:0006614 ... P09132 27899666
    377250 5m73:C (3.4) BS01 rna ? GO:0003723 ... Q9UHB9 27899666
    377251 5m73:D (3.4) BS01 rna ? GO:0006614 ... O76094 27899666
    377252 5m73:F (3.4) BS01 rna ? GO:0006614 ... P09132 27899666
    377253 5m73:G (3.4) BS01 rna ? GO:0003723 ... Q9UHB9 27899666
    377254 5m73:H (3.4) BS01 rna ? GO:0006614 ... O76094 27899666
    377255 5m75:A (1.538) BS01 peptide 2.7.11.11 GO:0000287 ... P25321 N/A
    377256 5m75:A (1.538) BS02 9K6 2.7.11.11 GO:0000287 ... P25321 N/A
    377257 5m77:A (1.46) BS01 7K2 ? GO:0005975 ... Q9Z4P9 28766587
    377258 5m77:A (1.46) BS02 7K3 ? GO:0005975 ... Q9Z4P9 28766587
    377259 5m77:B (1.46) BS01 7K2 ? GO:0005975 ... Q9Z4P9 28766587
    377260 5m77:B (1.46) BS02 7K3 ? GO:0005975 ... Q9Z4P9 28766587
    377261 5m78:A (1.077) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 32235320
    377262 5m79:A (1.3) BS01 MN 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 N/A
    377263 5m79:A (1.3) BS02 U5P 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 N/A
    377264 5m7a:A (1.304) BS01 U5P 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 N/A
    377265 5m7b:A (1.5) BS01 MN 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 N/A
    377266 5m7b:A (1.5) BS02 UDP 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 N/A
    377267 5m7c:A (1.6) BS01 MN 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 N/A
    377268 5m7c:A (1.6) BS02 UDP 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 N/A
    377269 5m7c:B (1.6) BS01 MN 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 N/A
    377270 5m7c:B (1.6) BS02 UDP 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 N/A
    377271 5m7d:A (1.2) BS01 MN 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 N/A
    377272 5m7d:A (1.2) BS02 GDU 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 N/A
    377273 5m7e:A (2.046) BS01 GTP 3.6.5.- GO:0000226 ... P81947 28276440
    377274 5m7e:A (2.046) BS02 CA 3.6.5.- GO:0000226 ... P81947 28276440
    377275 5m7e:B (2.046) BS01 GDP ? GO:0000226 ... Q6B856 28276440
    377276 5m7e:B (2.046) BS02 SD5 ? GO:0000226 ... Q6B856 28276440
    377277 5m7e:C (2.046) BS01 GTP 3.6.5.- GO:0000226 ... P81947 28276440
    377278 5m7e:C (2.046) BS02 CA 3.6.5.- GO:0000226 ... P81947 28276440
    377279 5m7e:D (2.046) BS01 GDP ? GO:0000226 ... Q6B856 28276440
    377280 5m7e:F (2.046) BS01 ACP N/A GO:0036211 ... N/A 28276440
    377281 5m7f:A (2.78) BS01 DPM 2.5.1.61 GO:0004418 ... P08397 29908816
    377282 5m7f:B (2.78) BS01 DPM 2.5.1.61 GO:0004418 ... P08397 29908816
    377283 5m7g:A (2.248) BS01 GTP 3.6.5.- GO:0000226 ... P81947 28276440
    377284 5m7g:A (2.248) BS02 CA 3.6.5.- GO:0000226 ... P81947 28276440
    377285 5m7g:B (2.248) BS01 FB7 ? GO:0000226 ... Q6B856 28276440
    377286 5m7g:B (2.248) BS02 GDP ? GO:0000226 ... Q6B856 28276440
    377287 5m7g:C (2.248) BS01 GTP 3.6.5.- GO:0000226 ... P81947 28276440
    377288 5m7g:C (2.248) BS02 CA 3.6.5.- GO:0000226 ... P81947 28276440
    377289 5m7g:C (2.248) BS03 FB7 3.6.5.- GO:0000226 ... P81947 28276440
    377290 5m7g:D (2.248) BS01 FB7 ? GO:0000226 ... Q6B856 28276440
    377291 5m7g:D (2.248) BS02 GDP ? GO:0000226 ... Q6B856 28276440
    377292 5m7g:F (2.248) BS01 ACP N/A GO:0036211 ... N/A 28276440
    377293 5m7h:A (3.15) BS01 GNP ? GO:0005525 ... P50743 N/A
    377294 5m7i:A (2.1) BS01 BMA ? GO:0005975 ... Q8XNB2 28026180
    377295 5m7i:A (2.1) BS02 MAN ? GO:0005975 ... Q8XNB2 28026180
    377296 5m7j:A (3.5) BS01 HEC ? GO:0005506 ... P07173 28248658
    377297 5m7j:A (3.5) BS02 HEC ? GO:0005506 ... P07173 28248658
    377298 5m7j:A (3.5) BS03 HEC ? GO:0005506 ... P07173 28248658
    377299 5m7j:A (3.5) BS04 HEC ? GO:0005506 ... P07173 28248658
    377300 5m7j:B (3.5) BS01 BCL ? GO:0009772 ... P06009 28248658
    377301 5m7j:B (3.5) BS02 BCL ? GO:0009772 ... P06009 28248658
    377302 5m7j:B (3.5) BS03 BCL ? GO:0009772 ... P06009 28248658
    377303 5m7j:B (3.5) BS04 BPB ? GO:0009772 ... P06009 28248658
    377304 5m7j:B (3.5) BS05 MPG ? GO:0009772 ... P06009 28248658
    377305 5m7j:B (3.5) BS06 MPG ? GO:0009772 ... P06009 28248658
    377306 5m7j:B (3.5) BS07 FE2 ? GO:0009772 ... P06009 28248658
    377307 5m7j:B (3.5) BS08 BPB ? GO:0009772 ... P06009 28248658
    377308 5m7j:B (3.5) BS09 MQ7 ? GO:0009772 ... P06009 28248658
    377309 5m7j:C (3.5) BS01 BCL ? GO:0009772 ... P06010 28248658
    377310 5m7j:C (3.5) BS02 BCL ? GO:0009772 ... P06010 28248658
    377311 5m7j:C (3.5) BS03 BPB ? GO:0009772 ... P06010 28248658
    377312 5m7j:C (3.5) BS04 MPG ? GO:0009772 ... P06010 28248658
    377313 5m7j:C (3.5) BS05 FE2 ? GO:0009772 ... P06010 28248658
    377314 5m7j:C (3.5) BS06 BCL ? GO:0009772 ... P06010 28248658
    377315 5m7j:C (3.5) BS07 BPB ? GO:0009772 ... P06010 28248658
    377316 5m7j:C (3.5) BS08 MQ7 ? GO:0009772 ... P06010 28248658
    377317 5m7j:C (3.5) BS09 NS5 ? GO:0009772 ... P06010 28248658
    377318 5m7j:C (3.5) BS10 OTP ? GO:0009772 ... P06010 28248658
    377319 5m7j:D (3.5) BS01 OTP ? GO:0015979 ... P06008 28248658
    377320 5m7k:A (3.5) BS01 HEC ? GO:0005506 ... P07173 28248658
    377321 5m7k:A (3.5) BS02 HEC ? GO:0005506 ... P07173 28248658
    377322 5m7k:A (3.5) BS03 HEC ? GO:0005506 ... P07173 28248658
    377323 5m7k:A (3.5) BS04 HEC ? GO:0005506 ... P07173 28248658
    377324 5m7k:B (3.5) BS01 BCL ? GO:0009772 ... P06009 28248658
    377325 5m7k:B (3.5) BS02 BCL ? GO:0009772 ... P06009 28248658
    377326 5m7k:B (3.5) BS03 BCL ? GO:0009772 ... P06009 28248658
    377327 5m7k:B (3.5) BS04 BPB ? GO:0009772 ... P06009 28248658
    377328 5m7k:B (3.5) BS05 MPG ? GO:0009772 ... P06009 28248658
    377329 5m7k:B (3.5) BS06 MPG ? GO:0009772 ... P06009 28248658
    377330 5m7k:B (3.5) BS07 BPB ? GO:0009772 ... P06009 28248658
    377331 5m7k:B (3.5) BS08 FE2 ? GO:0009772 ... P06009 28248658
    377332 5m7k:B (3.5) BS09 MQ7 ? GO:0009772 ... P06009 28248658
    377333 5m7k:C (3.5) BS01 BCL ? GO:0009772 ... P06010 28248658
    377334 5m7k:C (3.5) BS02 BCL ? GO:0009772 ... P06010 28248658
    377335 5m7k:C (3.5) BS03 BPB ? GO:0009772 ... P06010 28248658
    377336 5m7k:C (3.5) BS04 MPG ? GO:0009772 ... P06010 28248658
    377337 5m7k:C (3.5) BS05 BCL ? GO:0009772 ... P06010 28248658
    377338 5m7k:C (3.5) BS06 BPB ? GO:0009772 ... P06010 28248658
    377339 5m7k:C (3.5) BS07 FE2 ? GO:0009772 ... P06010 28248658
    377340 5m7k:C (3.5) BS08 MQ7 ? GO:0009772 ... P06010 28248658
    377341 5m7k:C (3.5) BS09 NS5 ? GO:0009772 ... P06010 28248658
    377342 5m7k:C (3.5) BS10 OTP ? GO:0009772 ... P06010 28248658
    377343 5m7k:D (3.5) BS01 OTP ? GO:0015979 ... P06008 28248658
    377344 5m7l:A (3.6) BS01 HEC ? GO:0005506 ... P07173 28248658
    377345 5m7l:A (3.6) BS02 HEC ? GO:0005506 ... P07173 28248658
    377346 5m7l:A (3.6) BS03 HEC ? GO:0005506 ... P07173 28248658
    377347 5m7l:A (3.6) BS04 HEC ? GO:0005506 ... P07173 28248658
    377348 5m7l:B (3.6) BS01 BCL ? GO:0009772 ... P06009 28248658
    377349 5m7l:B (3.6) BS02 BCL ? GO:0009772 ... P06009 28248658
    377350 5m7l:B (3.6) BS03 BCL ? GO:0009772 ... P06009 28248658
    377351 5m7l:B (3.6) BS04 BPB ? GO:0009772 ... P06009 28248658
    377352 5m7l:B (3.6) BS05 MPG ? GO:0009772 ... P06009 28248658
    377353 5m7l:B (3.6) BS06 MPG ? GO:0009772 ... P06009 28248658
    377354 5m7l:B (3.6) BS07 BPB ? GO:0009772 ... P06009 28248658
    377355 5m7l:B (3.6) BS08 FE2 ? GO:0009772 ... P06009 28248658
    377356 5m7l:B (3.6) BS09 MQ7 ? GO:0009772 ... P06009 28248658
    377357 5m7l:C (3.6) BS01 BCL ? GO:0009772 ... P06010 28248658
    377358 5m7l:C (3.6) BS02 BCL ? GO:0009772 ... P06010 28248658
    377359 5m7l:C (3.6) BS03 BPB ? GO:0009772 ... P06010 28248658
    377360 5m7l:C (3.6) BS04 MPG ? GO:0009772 ... P06010 28248658
    377361 5m7l:C (3.6) BS05 BCL ? GO:0009772 ... P06010 28248658
    377362 5m7l:C (3.6) BS06 BPB ? GO:0009772 ... P06010 28248658
    377363 5m7l:C (3.6) BS07 FE2 ? GO:0009772 ... P06010 28248658
    377364 5m7l:C (3.6) BS08 MQ7 ? GO:0009772 ... P06010 28248658
    377365 5m7l:C (3.6) BS09 NS5 ? GO:0009772 ... P06010 28248658
    377366 5m7l:C (3.6) BS10 OTP ? GO:0009772 ... P06010 28248658
    377367 5m7l:D (3.6) BS01 OTP ? GO:0015979 ... P06008 28248658
    377368 5m7m:A (2.7) BS01 MAN 3.1.4.39 GO:0003676 ... Q13822 28731719
    377369 5m7m:A (2.7) BS02 7HR 3.1.4.39 GO:0003676 ... Q13822 28731719 BindingDB: IC50=300nM
    377370 5m7m:A (2.7) BS03 ZN 3.1.4.39 GO:0003676 ... Q13822 28731719
    377371 5m7m:A (2.7) BS04 ZN 3.1.4.39 GO:0003676 ... Q13822 28731719
    377372 5m7m:A (2.7) BS05 ZN 3.1.4.39 GO:0003676 ... Q13822 28731719
    377373 5m7n:A (2.9) BS01 MG N/A GO:0000160 ... N/A 28088479
    377374 5m7n:A (2.9) BS02 ATP N/A GO:0000160 ... N/A 28088479
    377375 5m7n:B (2.9) BS01 ATP N/A GO:0000160 ... N/A 28088479
    377376 5m7n:B (2.9) BS02 MG N/A GO:0000160 ... N/A 28088479
    377377 5m7n:B (2.9) BS03 ATP N/A GO:0000160 ... N/A 28088479
    377378 5m7o:A (2.2) BS01 MG N/A GO:0000160 ... N/A 28088479
    377379 5m7o:B (2.2) BS01 MG N/A GO:0000160 ... N/A 28088479
    377380 5m7p:A (2.36) BS01 MG N/A GO:0000160 ... N/A 28088479
    377381 5m7p:A (2.36) BS02 ADP N/A GO:0000160 ... N/A 28088479 MOAD: Kd=70uM
    377382 5m7p:B (2.36) BS01 MG N/A GO:0000160 ... N/A 28088479
    377383 5m7p:B (2.36) BS02 ADP N/A GO:0000160 ... N/A 28088479 MOAD: Kd=70uM
    377384 5m7s:A (2.4) BS01 NHT 3.2.1.169 GO:0004415 ... O60502 28346405 MOAD: Ki=0.9nM
    BindingDB: Ki=21nM, EC50=13nM, IC50=0.410000nM
    377385 5m7s:B (2.4) BS01 NHT 3.2.1.169 GO:0004415 ... O60502 28346405 MOAD: Ki=0.9nM
    BindingDB: Ki=21nM, EC50=13nM, IC50=0.410000nM
    377386 5m7t:A (2.6) BS01 GDV 3.2.1.169 GO:0004415 ... O60502 28346405
    377387 5m7t:B (2.6) BS01 GDV 3.2.1.169 GO:0004415 ... O60502 28346405
    377388 5m7u:A (2.3) BS01 XHA 3.2.1.169 GO:0004415 ... O60502 28346405 MOAD: Ki=8nM
    377389 5m7u:A (2.3) BS02 XHA 3.2.1.169 GO:0004415 ... O60502 28346405 MOAD: Ki=8nM
    377390 5m7u:B (2.3) BS01 XHA 3.2.1.169 GO:0004415 ... O60502 28346405 MOAD: Ki=8nM
    377391 5m7v:A (1.74) BS01 WZO ? GO:0003723 ... P63073 N/A
    377392 5m7v:B (1.74) BS01 WZO ? GO:0003723 ... P63073 N/A
    377393 5m7v:C (1.74) BS01 WZO ? GO:0003723 ... P63073 N/A
    377394 5m7w:A (1.97) BS01 WZO ? GO:0003723 ... P63073 N/A
    377395 5m7w:B (1.97) BS01 WZO ? GO:0003723 ... P63073 N/A
    377396 5m7w:C (1.97) BS01 WZO ? GO:0003723 ... P63073 N/A
    377397 5m7w:D (1.97) BS01 WZO ? GO:0003723 ... P63073 N/A
    377398 5m7x:A (1.68) BS01 RSE ? GO:0003723 ... P63073 N/A
    377399 5m7x:B (1.68) BS01 RSE ? GO:0003723 ... P63073 N/A
    377400 5m7x:C (1.68) BS01 RSE ? GO:0003723 ... P63073 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).