SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    377401 5m7x:D (1.68) BS01 RSE ? GO:0003723 ... P63073 N/A
    377402 5m7y:A (1.55) BS01 MAN ? GO:0005975 ... Q8XNB2 28026180
    377403 5m7y:A (1.55) BS02 MAN ? GO:0005975 ... Q8XNB2 28026180
    377404 5m7z:A (1.689) BS01 7LO ? GO:0003723 ... P63073 N/A
    377405 5m7z:B (1.689) BS01 7LO ? GO:0003723 ... P63073 N/A
    377406 5m7z:C (1.689) BS01 7LO ? GO:0003723 ... P63073 N/A
    377407 5m80:A (2.12) BS01 7L2 ? GO:0003723 ... P63073 N/A
    377408 5m80:B (2.12) BS01 7L2 ? GO:0003723 ... P63073 N/A
    377409 5m81:A (1.9) BS01 7L2 ? GO:0003723 ... P63073 N/A
    377410 5m81:B (1.9) BS01 7L2 ? GO:0003723 ... P63073 N/A
    377411 5m81:C (1.9) BS01 7L2 ? GO:0003723 ... P63073 N/A
    377412 5m81:D (1.9) BS01 7L2 ? GO:0003723 ... P63073 N/A
    377413 5m82:A (1.86) BS01 3CX 2.7.13.3 GO:0005975 ... P73184 N/A
    377414 5m83:A (1.86) BS01 YDZ ? GO:0003723 ... P63073 N/A
    377415 5m83:B (1.86) BS01 YDZ ? GO:0003723 ... P63073 N/A
    377416 5m84:A (1.85) BS01 YDZ ? GO:0003723 ... P63073 N/A
    377417 5m84:B (1.85) BS01 YDZ ? GO:0003723 ... P63073 N/A
    377418 5m85:A (2.1) BS01 3CX 2.7.13.3 GO:0005975 ... P73184 N/A
    377419 5m86:A (2.4) BS01 CA ? GO:0046872 ... Q9HIW9 28580920
    377420 5m86:B (2.4) BS01 CA ? GO:0046872 ... Q9HIW9 28580920
    377421 5m86:C (2.4) BS01 CA ? GO:0046872 ... Q9HIW9 28580920
    377422 5m86:D (2.4) BS01 CA ? GO:0046872 ... Q9HIW9 28580920
    377423 5m86:E (2.4) BS01 CA ? GO:0046872 ... Q9HIW9 28580920
    377424 5m86:F (2.4) BS01 CA ? GO:0046872 ... Q9HIW9 28580920
    377425 5m86:G (2.4) BS01 CA ? GO:0046872 ... Q9HIW9 28580920
    377426 5m86:H (2.4) BS01 CA ? GO:0046872 ... Q9HIW9 28580920
    377427 5m86:I (2.4) BS01 CA ? GO:0046872 ... Q9HIW9 28580920
    377428 5m86:J (2.4) BS01 CA ? GO:0046872 ... Q9HIW9 28580920
    377429 5m87:A (3.3) BS01 DMU ? GO:0005384 ... E4KPW4 28059071
    377430 5m8b:A (1.9) BS01 MG ? GO:0004553 ... A0A5B7Y0Z3 N/A
    377431 5m8b:B (1.9) BS01 MG ? GO:0004553 ... A0A5B7Y0Z3 N/A
    377432 5m8d:A (2.25) BS01 GTP 3.6.5.- GO:0000226 ... P81947 28276440
    377433 5m8d:A (2.25) BS02 CA 3.6.5.- GO:0000226 ... P81947 28276440
    377434 5m8d:A (2.25) BS03 UGI 3.6.5.- GO:0000226 ... P81947 28276440
    377435 5m8d:B (2.25) BS01 UGI ? GO:0000226 ... Q6B856 28276440
    377436 5m8d:B (2.25) BS02 GDP ? GO:0000226 ... Q6B856 28276440
    377437 5m8d:C (2.25) BS01 GTP 3.6.5.- GO:0000226 ... P81947 28276440
    377438 5m8d:C (2.25) BS02 CA 3.6.5.- GO:0000226 ... P81947 28276440
    377439 5m8d:D (2.25) BS01 GDP ? GO:0000226 ... Q6B856 28276440
    377440 5m8d:F (2.25) BS01 MG N/A GO:0036211 ... N/A 28276440
    377441 5m8d:F (2.25) BS02 ACP N/A GO:0036211 ... N/A 28276440
    377442 5m8e:A (2.0) BS01 CA 3.2.1.55 GO:0004553 ... A0A0D1M7L2 28485897
    377443 5m8e:B (2.0) BS01 CA 3.2.1.55 GO:0004553 ... A0A0D1M7L2 28485897
    377444 5m8g:A (2.147) BS01 GTP 3.6.5.- GO:0000226 ... P81947 28276440
    377445 5m8g:A (2.147) BS02 CA 3.6.5.- GO:0000226 ... P81947 28276440
    377446 5m8g:B (2.147) BS01 918 ? GO:0000226 ... Q6B856 28276440
    377447 5m8g:B (2.147) BS02 GDP ? GO:0000226 ... Q6B856 28276440
    377448 5m8g:C (2.147) BS01 GTP 3.6.5.- GO:0000226 ... P81947 28276440
    377449 5m8g:C (2.147) BS02 CA 3.6.5.- GO:0000226 ... P81947 28276440
    377450 5m8g:D (2.147) BS01 918 ? GO:0000226 ... Q6B856 28276440
    377451 5m8g:D (2.147) BS02 GDP ? GO:0000226 ... Q6B856 28276440
    377452 5m8g:F (2.147) BS01 MG N/A GO:0036211 ... N/A 28276440
    377453 5m8g:F (2.147) BS02 ACP N/A GO:0036211 ... N/A 28276440
    377454 5m8i:A (-1.00) BS01 rna ? GO:0003676 ... O95319 28935965
    377455 5m8l:A (2.35) BS01 FUC 1.14.18.- GO:0016491 ... P17643 28661582
    377456 5m8l:A (2.35) BS02 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377457 5m8l:A (2.35) BS03 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377458 5m8l:A (2.35) BS04 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377459 5m8l:B (2.35) BS01 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377460 5m8l:B (2.35) BS02 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377461 5m8l:B (2.35) BS03 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377462 5m8l:C (2.35) BS01 MAN 1.14.18.- GO:0016491 ... P17643 28661582
    377463 5m8l:C (2.35) BS02 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377464 5m8l:C (2.35) BS03 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377465 5m8l:D (2.35) BS01 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377466 5m8l:D (2.35) BS02 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377467 5m8m:A (2.65) BS01 FUC 1.14.18.- GO:0016491 ... P17643 28661582
    377468 5m8m:A (2.65) BS02 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377469 5m8m:A (2.65) BS03 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377470 5m8m:A (2.65) BS04 KOJ 1.14.18.- GO:0016491 ... P17643 28661582
    377471 5m8m:A (2.65) BS05 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377472 5m8m:B (2.65) BS01 FUC 1.14.18.- GO:0016491 ... P17643 28661582
    377473 5m8m:B (2.65) BS02 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377474 5m8m:B (2.65) BS03 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377475 5m8m:B (2.65) BS04 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377476 5m8m:B (2.65) BS05 KOJ 1.14.18.- GO:0016491 ... P17643 28661582
    377477 5m8m:C (2.65) BS01 FUC 1.14.18.- GO:0016491 ... P17643 28661582
    377478 5m8m:C (2.65) BS02 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377479 5m8m:C (2.65) BS03 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377480 5m8m:C (2.65) BS04 KOJ 1.14.18.- GO:0016491 ... P17643 28661582
    377481 5m8m:D (2.65) BS01 FUC 1.14.18.- GO:0016491 ... P17643 28661582
    377482 5m8m:D (2.65) BS02 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377483 5m8m:D (2.65) BS03 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377484 5m8m:D (2.65) BS04 KOJ 1.14.18.- GO:0016491 ... P17643 28661582
    377485 5m8n:A (2.6) BS01 FUC 1.14.18.- GO:0016491 ... P17643 28661582
    377486 5m8n:A (2.6) BS02 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377487 5m8n:A (2.6) BS03 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377488 5m8n:A (2.6) BS04 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377489 5m8n:A (2.6) BS05 MMS 1.14.18.- GO:0016491 ... P17643 28661582
    377490 5m8n:B (2.6) BS01 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377491 5m8n:B (2.6) BS02 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377492 5m8n:B (2.6) BS03 MMS 1.14.18.- GO:0016491 ... P17643 28661582
    377493 5m8n:C (2.6) BS01 FUC 1.14.18.- GO:0016491 ... P17643 28661582
    377494 5m8n:C (2.6) BS02 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377495 5m8n:C (2.6) BS03 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377496 5m8n:C (2.6) BS04 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377497 5m8n:C (2.6) BS05 MMS 1.14.18.- GO:0016491 ... P17643 28661582
    377498 5m8n:D (2.6) BS01 FUC 1.14.18.- GO:0016491 ... P17643 28661582
    377499 5m8n:D (2.6) BS02 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377500 5m8n:D (2.6) BS03 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377501 5m8n:D (2.6) BS04 MMS 1.14.18.- GO:0016491 ... P17643 28661582
    377502 5m8o:A (2.5) BS01 0TR 1.14.18.- GO:0016491 ... P17643 28661582
    377503 5m8o:A (2.5) BS02 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377504 5m8o:A (2.5) BS03 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377505 5m8o:B (2.5) BS01 MAN 1.14.18.- GO:0016491 ... P17643 28661582
    377506 5m8o:B (2.5) BS02 0TR 1.14.18.- GO:0016491 ... P17643 28661582
    377507 5m8o:B (2.5) BS03 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377508 5m8o:B (2.5) BS04 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377509 5m8o:C (2.5) BS01 MAN 1.14.18.- GO:0016491 ... P17643 28661582
    377510 5m8o:C (2.5) BS02 0TR 1.14.18.- GO:0016491 ... P17643 28661582
    377511 5m8o:C (2.5) BS03 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377512 5m8o:C (2.5) BS04 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377513 5m8o:D (2.5) BS01 0TR 1.14.18.- GO:0016491 ... P17643 28661582
    377514 5m8o:D (2.5) BS02 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377515 5m8o:D (2.5) BS03 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377516 5m8p:A (2.8) BS01 FUC 1.14.18.- GO:0016491 ... P17643 28661582
    377517 5m8p:A (2.8) BS02 TYR 1.14.18.- GO:0016491 ... P17643 28661582
    377518 5m8p:A (2.8) BS03 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377519 5m8p:A (2.8) BS04 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377520 5m8p:A (2.8) BS05 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377521 5m8p:B (2.8) BS01 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377522 5m8p:B (2.8) BS02 TYR 1.14.18.- GO:0016491 ... P17643 28661582
    377523 5m8p:B (2.8) BS03 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377524 5m8p:B (2.8) BS04 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377525 5m8p:C (2.8) BS01 TYR 1.14.18.- GO:0016491 ... P17643 28661582
    377526 5m8p:C (2.8) BS02 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377527 5m8p:C (2.8) BS03 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377528 5m8p:D (2.8) BS01 TYR 1.14.18.- GO:0016491 ... P17643 28661582
    377529 5m8p:D (2.8) BS02 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377530 5m8p:D (2.8) BS03 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377531 5m8q:A (2.85) BS01 FUC 1.14.18.- GO:0016491 ... P17643 28661582
    377532 5m8q:A (2.85) BS02 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377533 5m8q:A (2.85) BS03 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377534 5m8q:A (2.85) BS04 KOJ 1.14.18.- GO:0016491 ... P17643 28661582
    377535 5m8q:B (2.85) BS01 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377536 5m8q:B (2.85) BS02 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377537 5m8q:B (2.85) BS03 KOJ 1.14.18.- GO:0016491 ... P17643 28661582
    377538 5m8q:C (2.85) BS01 FUC 1.14.18.- GO:0016491 ... P17643 28661582
    377539 5m8q:C (2.85) BS02 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377540 5m8q:C (2.85) BS03 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377541 5m8q:C (2.85) BS04 KOJ 1.14.18.- GO:0016491 ... P17643 28661582
    377542 5m8q:C (2.85) BS05 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377543 5m8q:D (2.85) BS01 FUC 1.14.18.- GO:0016491 ... P17643 28661582
    377544 5m8q:D (2.85) BS02 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377545 5m8q:D (2.85) BS03 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377546 5m8q:D (2.85) BS04 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377547 5m8q:D (2.85) BS05 KOJ 1.14.18.- GO:0016491 ... P17643 28661582
    377548 5m8r:A (2.4) BS01 FUC 1.14.18.- GO:0016491 ... P17643 28661582
    377549 5m8r:A (2.4) BS02 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377550 5m8r:A (2.4) BS03 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377551 5m8r:A (2.4) BS04 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377552 5m8r:A (2.4) BS05 MMS 1.14.18.- GO:0016491 ... P17643 28661582
    377553 5m8r:B (2.4) BS01 FUC 1.14.18.- GO:0016491 ... P17643 28661582
    377554 5m8r:B (2.4) BS02 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377555 5m8r:B (2.4) BS03 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377556 5m8r:B (2.4) BS04 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377557 5m8r:B (2.4) BS05 MMS 1.14.18.- GO:0016491 ... P17643 28661582
    377558 5m8r:C (2.4) BS01 FUC 1.14.18.- GO:0016491 ... P17643 28661582
    377559 5m8r:C (2.4) BS02 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377560 5m8r:C (2.4) BS03 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377561 5m8r:C (2.4) BS04 MMS 1.14.18.- GO:0016491 ... P17643 28661582
    377562 5m8r:D (2.4) BS01 FUC 1.14.18.- GO:0016491 ... P17643 28661582
    377563 5m8r:D (2.4) BS02 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377564 5m8r:D (2.4) BS03 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377565 5m8r:D (2.4) BS04 MMS 1.14.18.- GO:0016491 ... P17643 28661582
    377566 5m8s:A (2.2) BS01 FUC 1.14.18.- GO:0016491 ... P17643 32019241
    377567 5m8s:A (2.2) BS02 URS 1.14.18.- GO:0016491 ... P17643 32019241
    377568 5m8s:A (2.2) BS03 ZN 1.14.18.- GO:0016491 ... P17643 32019241
    377569 5m8s:A (2.2) BS04 ZN 1.14.18.- GO:0016491 ... P17643 32019241
    377570 5m8s:A (2.2) BS05 ZN 1.14.18.- GO:0016491 ... P17643 32019241
    377571 5m8s:B (2.2) BS01 FUC 1.14.18.- GO:0016491 ... P17643 32019241
    377572 5m8s:B (2.2) BS02 ZN 1.14.18.- GO:0016491 ... P17643 32019241
    377573 5m8s:B (2.2) BS03 URS 1.14.18.- GO:0016491 ... P17643 32019241
    377574 5m8s:B (2.2) BS04 ZN 1.14.18.- GO:0016491 ... P17643 32019241
    377575 5m8s:B (2.2) BS05 ZN 1.14.18.- GO:0016491 ... P17643 32019241
    377576 5m8s:C (2.2) BS01 URS 1.14.18.- GO:0016491 ... P17643 32019241
    377577 5m8s:C (2.2) BS02 ZN 1.14.18.- GO:0016491 ... P17643 32019241
    377578 5m8s:C (2.2) BS03 ZN 1.14.18.- GO:0016491 ... P17643 32019241
    377579 5m8s:D (2.2) BS01 FUC 1.14.18.- GO:0016491 ... P17643 32019241
    377580 5m8s:D (2.2) BS02 URS 1.14.18.- GO:0016491 ... P17643 32019241
    377581 5m8s:D (2.2) BS03 ZN 1.14.18.- GO:0016491 ... P17643 32019241
    377582 5m8s:D (2.2) BS04 ZN 1.14.18.- GO:0016491 ... P17643 32019241
    377583 5m8t:A (2.35) BS01 FUC 1.14.18.- GO:0016491 ... P17643 28661582
    377584 5m8t:A (2.35) BS02 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377585 5m8t:A (2.35) BS03 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377586 5m8t:A (2.35) BS04 0TR 1.14.18.- GO:0016491 ... P17643 28661582
    377587 5m8t:B (2.35) BS01 FUC 1.14.18.- GO:0016491 ... P17643 28661582
    377588 5m8t:B (2.35) BS02 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377589 5m8t:B (2.35) BS03 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377590 5m8t:B (2.35) BS04 0TR 1.14.18.- GO:0016491 ... P17643 28661582
    377591 5m8t:C (2.35) BS01 FUC 1.14.18.- GO:0016491 ... P17643 28661582
    377592 5m8t:C (2.35) BS02 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377593 5m8t:C (2.35) BS03 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377594 5m8t:C (2.35) BS04 0TR 1.14.18.- GO:0016491 ... P17643 28661582
    377595 5m8t:D (2.35) BS01 FUC 1.14.18.- GO:0016491 ... P17643 28661582
    377596 5m8t:D (2.35) BS02 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377597 5m8t:D (2.35) BS03 ZN 1.14.18.- GO:0016491 ... P17643 28661582
    377598 5m8t:D (2.35) BS04 0TR 1.14.18.- GO:0016491 ... P17643 28661582
    377599 5m8u:A (1.9) BS01 SF4 1.21.99.5 GO:0005737 ... O68252 28671181
    377600 5m8u:A (1.9) BS02 SF4 1.21.99.5 GO:0005737 ... O68252 28671181

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).