SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    377601 5m8u:A (1.9) BS03 BVQ 1.21.99.5 GO:0005737 ... O68252 28671181
    377602 5m8u:A (1.9) BS04 BML 1.21.99.5 GO:0005737 ... O68252 28671181
    377603 5m8u:A (1.9) BS05 BML 1.21.99.5 GO:0005737 ... O68252 28671181
    377604 5m8u:B (1.9) BS01 BML 1.21.99.5 GO:0005737 ... O68252 28671181
    377605 5m8u:B (1.9) BS02 SF4 1.21.99.5 GO:0005737 ... O68252 28671181
    377606 5m8u:B (1.9) BS03 SF4 1.21.99.5 GO:0005737 ... O68252 28671181
    377607 5m8u:B (1.9) BS04 BVQ 1.21.99.5 GO:0005737 ... O68252 28671181
    377608 5m8u:B (1.9) BS05 BML 1.21.99.5 GO:0005737 ... O68252 28671181
    377609 5m8u:B (1.9) BS06 BML 1.21.99.5 GO:0005737 ... O68252 28671181
    377610 5m8w:A (2.279) BS01 SF4 1.21.99.5 GO:0005737 ... O68252 28671181
    377611 5m8w:A (2.279) BS02 SF4 1.21.99.5 GO:0005737 ... O68252 28671181
    377612 5m8w:A (2.279) BS03 BVQ 1.21.99.5 GO:0005737 ... O68252 28671181
    377613 5m8w:A (2.279) BS04 4CH 1.21.99.5 GO:0005737 ... O68252 28671181
    377614 5m8w:B (2.279) BS01 SF4 1.21.99.5 GO:0005737 ... O68252 28671181
    377615 5m8w:B (2.279) BS02 SF4 1.21.99.5 GO:0005737 ... O68252 28671181
    377616 5m8w:B (2.279) BS03 BVQ 1.21.99.5 GO:0005737 ... O68252 28671181
    377617 5m8w:B (2.279) BS04 4CH 1.21.99.5 GO:0005737 ... O68252 28671181
    377618 5m8x:A (1.869) BS01 SF4 N/A N/A N/A 28671181
    377619 5m8x:A (1.869) BS02 SF4 N/A N/A N/A 28671181
    377620 5m8x:A (1.869) BS03 BVQ N/A N/A N/A 28671181
    377621 5m8x:A (1.869) BS04 TC7 N/A N/A N/A 28671181
    377622 5m8x:B (1.869) BS01 SF4 N/A N/A N/A 28671181
    377623 5m8x:B (1.869) BS02 SF4 N/A N/A N/A 28671181
    377624 5m8x:B (1.869) BS03 BVQ N/A N/A N/A 28671181
    377625 5m8x:B (1.869) BS04 TC7 N/A N/A N/A 28671181
    377626 5m8y:A (1.857) BS01 SF4 N/A N/A N/A 28671181
    377627 5m8y:A (1.857) BS02 SF4 N/A N/A N/A 28671181
    377628 5m8y:A (1.857) BS03 BVQ N/A N/A N/A 28671181
    377629 5m8y:A (1.857) BS04 3CH N/A N/A N/A 28671181
    377630 5m8y:B (1.857) BS01 SF4 N/A N/A N/A 28671181
    377631 5m8y:B (1.857) BS02 SF4 N/A N/A N/A 28671181
    377632 5m8y:B (1.857) BS03 BVQ N/A N/A N/A 28671181
    377633 5m8y:B (1.857) BS04 3CH N/A N/A N/A 28671181
    377634 5m8z:A (1.659) BS01 SF4 N/A N/A N/A 28671181
    377635 5m8z:A (1.659) BS02 SF4 N/A N/A N/A 28671181
    377636 5m8z:A (1.659) BS03 BVQ N/A N/A N/A 28671181
    377637 5m8z:A (1.659) BS04 ZTN N/A N/A N/A 28671181
    377638 5m8z:B (1.659) BS01 SF4 N/A N/A N/A 28671181
    377639 5m8z:B (1.659) BS02 SF4 N/A N/A N/A 28671181
    377640 5m8z:B (1.659) BS03 BVQ N/A N/A N/A 28671181
    377641 5m8z:B (1.659) BS04 ZTN N/A N/A N/A 28671181
    377642 5m90:A (1.599) BS01 SF4 N/A N/A N/A 28671181
    377643 5m90:A (1.599) BS02 SF4 N/A N/A N/A 28671181
    377644 5m90:A (1.599) BS03 BVQ N/A N/A N/A 28671181
    377645 5m90:A (1.599) BS04 JIF N/A N/A N/A 28671181
    377646 5m90:B (1.599) BS01 SF4 N/A N/A N/A 28671181
    377647 5m90:B (1.599) BS02 SF4 N/A N/A N/A 28671181
    377648 5m90:B (1.599) BS03 BVQ N/A N/A N/A 28671181
    377649 5m90:B (1.599) BS04 JIF N/A N/A N/A 28671181
    377650 5m90:B (1.599) BS05 JIF N/A N/A N/A 28671181
    377651 5m91:A (1.719) BS01 SF4 N/A N/A N/A 28671181
    377652 5m91:A (1.719) BS02 SF4 N/A N/A N/A 28671181
    377653 5m91:A (1.719) BS03 BVQ N/A N/A N/A 28671181
    377654 5m91:A (1.719) BS04 94N N/A N/A N/A 28671181
    377655 5m91:B (1.719) BS01 SF4 N/A N/A N/A 28671181
    377656 5m91:B (1.719) BS02 SF4 N/A N/A N/A 28671181
    377657 5m91:B (1.719) BS03 BVQ N/A N/A N/A 28671181
    377658 5m91:B (1.719) BS04 94N N/A N/A N/A 28671181
    377659 5m92:A (1.785) BS01 SF4 N/A N/A N/A 28671181
    377660 5m92:A (1.785) BS02 SF4 N/A N/A N/A 28671181
    377661 5m92:A (1.785) BS03 BVQ N/A N/A N/A 28671181
    377662 5m92:A (1.785) BS04 Y8I N/A N/A N/A 28671181
    377663 5m92:A (1.785) BS05 Y8I N/A N/A N/A 28671181
    377664 5m92:A (1.785) BS06 Y8I N/A N/A N/A 28671181
    377665 5m92:B (1.785) BS01 SF4 N/A N/A N/A 28671181
    377666 5m92:B (1.785) BS02 SF4 N/A N/A N/A 28671181
    377667 5m92:B (1.785) BS03 BVQ N/A N/A N/A 28671181
    377668 5m92:B (1.785) BS04 Y8I N/A N/A N/A 28671181
    377669 5m92:B (1.785) BS05 Y8I N/A N/A N/A 28671181
    377670 5m93:B (1.793) BS01 RIB ? N/A P0CG47 27912065
    377671 5m93:C (1.793) BS01 RIB ? N/A P0CG47 27912065
    377672 5m95:A (3.4) BS01 MN N/A GO:0016020 ... N/A 25326704
    377673 5m95:C (3.4) BS01 MN N/A GO:0016020 ... N/A 25326704
    377674 5m96:A (1.77) BS01 Q6Y ? GO:0003677 ... P51449 27902884
    377675 5m96:A (1.77) BS02 Q6Y ? GO:0003677 ... P51449 27902884
    377676 5m96:A (1.77) BS03 Q6Y ? GO:0003677 ... P51449 27902884
    377677 5m96:B (1.77) BS01 Q6Y ? GO:0003677 ... P51449 27902884
    377678 5m96:B (1.77) BS02 Q6Y ? GO:0003677 ... P51449 27902884
    377679 5m96:B (1.77) BS03 Q6Y ? GO:0003677 ... P51449 27902884
    377680 5m99:A (1.96) BS01 CA 3.2.1.1 GO:0004556 ... A0A059TXD8 28648523
    377681 5m99:B (1.96) BS01 CA 3.2.1.1 GO:0004556 ... A0A059TXD8 28648523
    377682 5m9d:A (-1.00) BS01 peptide ? GO:0031124 ... Q05543 29073019
    377683 5m9e:A (2.83) BS01 peptide ? GO:0008017 ... Q10113 27872152
    377684 5m9e:A (2.83) BS02 peptide ? GO:0008017 ... Q10113 27872152
    377685 5m9e:A (2.83) BS03 peptide ? GO:0008017 ... Q10113 27872152
    377686 5m9e:B (2.83) BS01 peptide ? GO:0008017 ... Q10113 27872152
    377687 5m9e:B (2.83) BS02 peptide ? GO:0008017 ... Q10113 27872152
    377688 5m9e:B (2.83) BS03 peptide ? GO:0008017 ... Q10113 27872152
    377689 5m9e:C (2.83) BS01 peptide ? GO:0008017 ... Q10113 27872152
    377690 5m9e:C (2.83) BS02 peptide ? GO:0008017 ... Q10113 27872152
    377691 5m9e:C (2.83) BS03 peptide ? GO:0008017 ... Q10113 27872152
    377692 5m9e:D (2.83) BS01 peptide ? GO:0008017 ... Q10113 27872152
    377693 5m9e:D (2.83) BS02 peptide ? GO:0008017 ... Q10113 27872152
    377694 5m9e:D (2.83) BS03 peptide ? GO:0008017 ... Q10113 27872152
    377695 5m9n:A (1.95) BS01 peptide ? N/A Q9BXT4 N/A
    377696 5m9n:B (1.95) BS01 2MR ? N/A Q9BXT4 N/A
    377697 5m9o:A (1.45) BS01 peptide 3.1.31.1 N/A Q7KZF4 N/A
    377698 5m9w:A (1.21) BS01 ZN 3.4.24.27 GO:0004222 ... P00800 28696673
    377699 5m9w:A (1.21) BS02 CA 3.4.24.27 GO:0004222 ... P00800 28696673
    377700 5m9w:A (1.21) BS03 CA 3.4.24.27 GO:0004222 ... P00800 28696673
    377701 5m9w:A (1.21) BS04 CA 3.4.24.27 GO:0004222 ... P00800 28696673
    377702 5m9w:A (1.21) BS05 CA 3.4.24.27 GO:0004222 ... P00800 28696673
    377703 5m9w:A (1.21) BS06 7GR 3.4.24.27 GO:0004222 ... P00800 28696673 MOAD: Kd=5.7mM
    377704 5m9x:B (2.349) BS01 7KP 2.4.1.7 GO:0004645 ... A0ZZH6 29057405
    377705 5m9z:A (-1.00) BS01 ZN ? GO:0000993 ... P39081 28973460
    377706 5ma0:A (1.9) BS01 SF4 N/A N/A N/A 28671181
    377707 5ma0:A (1.9) BS02 SF4 N/A N/A N/A 28671181
    377708 5ma0:A (1.9) BS03 BVQ N/A N/A N/A 28671181
    377709 5ma0:A (1.9) BS04 DUB N/A N/A N/A 28671181
    377710 5ma0:B (1.9) BS01 SF4 N/A N/A N/A 28671181
    377711 5ma0:B (1.9) BS02 SF4 N/A N/A N/A 28671181
    377712 5ma0:B (1.9) BS03 BVQ N/A N/A N/A 28671181
    377713 5ma0:B (1.9) BS04 DUB N/A N/A N/A 28671181
    377714 5ma1:A (2.498) BS01 SF4 N/A N/A N/A 28671181
    377715 5ma1:A (2.498) BS02 SF4 N/A N/A N/A 28671181
    377716 5ma1:A (2.498) BS03 BVQ N/A N/A N/A 28671181
    377717 5ma1:A (2.498) BS04 T6C N/A N/A N/A 28671181
    377718 5ma1:B (2.498) BS01 SF4 N/A N/A N/A 28671181
    377719 5ma1:B (2.498) BS02 SF4 N/A N/A N/A 28671181
    377720 5ma1:B (2.498) BS03 BVQ N/A N/A N/A 28671181
    377721 5ma1:B (2.498) BS04 T6C N/A N/A N/A 28671181
    377722 5ma2:A (1.879) BS01 SF4 1.21.99.5 GO:0005737 ... O68252 28671181
    377723 5ma2:A (1.879) BS02 SF4 1.21.99.5 GO:0005737 ... O68252 28671181
    377724 5ma2:A (1.879) BS03 BVQ 1.21.99.5 GO:0005737 ... O68252 28671181
    377725 5ma2:A (1.879) BS04 IOL 1.21.99.5 GO:0005737 ... O68252 28671181
    377726 5ma2:A (1.879) BS05 IOL 1.21.99.5 GO:0005737 ... O68252 28671181
    377727 5ma2:B (1.879) BS01 IOL 1.21.99.5 GO:0005737 ... O68252 28671181
    377728 5ma2:B (1.879) BS02 SF4 1.21.99.5 GO:0005737 ... O68252 28671181
    377729 5ma2:B (1.879) BS03 SF4 1.21.99.5 GO:0005737 ... O68252 28671181
    377730 5ma2:B (1.879) BS04 BVQ 1.21.99.5 GO:0005737 ... O68252 28671181
    377731 5ma2:B (1.879) BS05 IOL 1.21.99.5 GO:0005737 ... O68252 28671181
    377732 5ma2:B (1.879) BS06 IOL 1.21.99.5 GO:0005737 ... O68252 28671181
    377733 5ma2:B (1.879) BS07 IOL 1.21.99.5 GO:0005737 ... O68252 28671181
    377734 5ma2:B (1.879) BS08 IOL 1.21.99.5 GO:0005737 ... O68252 28671181
    377735 5ma2:B (1.879) BS09 IOL 1.21.99.5 GO:0005737 ... O68252 28671181
    377736 5ma7:E (1.3) BS01 ZN 3.4.24.27 GO:0004222 ... P00800 28696673
    377737 5ma7:E (1.3) BS02 CA 3.4.24.27 GO:0004222 ... P00800 28696673
    377738 5ma7:E (1.3) BS03 CA 3.4.24.27 GO:0004222 ... P00800 28696673
    377739 5ma7:E (1.3) BS04 CA 3.4.24.27 GO:0004222 ... P00800 28696673
    377740 5ma7:E (1.3) BS05 CA 3.4.24.27 GO:0004222 ... P00800 28696673
    377741 5ma7:E (1.3) BS06 7K0 3.4.24.27 GO:0004222 ... P00800 28696673 MOAD: Kd=0.336mM
    377742 5maa:A (1.686) BS01 SF4 N/A N/A N/A 28671181
    377743 5maa:A (1.686) BS02 SF4 N/A N/A N/A 28671181
    377744 5maa:A (1.686) BS03 OBL N/A N/A N/A 28671181
    377745 5maa:A (1.686) BS04 B3R N/A N/A N/A 28671181
    377746 5maa:A (1.686) BS05 B3R N/A N/A N/A 28671181
    377747 5maa:B (1.686) BS01 B3R N/A N/A N/A 28671181
    377748 5maa:B (1.686) BS02 SF4 N/A N/A N/A 28671181
    377749 5maa:B (1.686) BS03 SF4 N/A N/A N/A 28671181
    377750 5maa:B (1.686) BS04 OBL N/A N/A N/A 28671181
    377751 5maa:B (1.686) BS05 B3R N/A N/A N/A 28671181
    377752 5maa:B (1.686) BS06 B3R N/A N/A N/A 28671181
    377753 5mab:A (2.436) BS01 HEC ? GO:0046872 ... A3DTD8 N/A
    377754 5mab:A (2.436) BS02 HEC ? GO:0046872 ... A3DTD8 N/A
    377755 5mab:A (2.436) BS03 HEC ? GO:0046872 ... A3DTD8 N/A
    377756 5mab:B (2.436) BS01 HEC ? GO:0046872 ... A3DTD8 N/A
    377757 5mab:B (2.436) BS02 HEC ? GO:0046872 ... A3DTD8 N/A
    377758 5mab:B (2.436) BS03 HEC ? GO:0046872 ... A3DTD8 N/A
    377759 5mab:C (2.436) BS01 HEC ? GO:0046872 ... A3DTD8 N/A
    377760 5mab:C (2.436) BS02 HEC ? GO:0046872 ... A3DTD8 N/A
    377761 5mab:C (2.436) BS03 HEC ? GO:0046872 ... A3DTD8 N/A
    377762 5mac:A (2.6) BS01 CAP 4.1.1.39 GO:0000287 ... Q12TQ0 28154188
    377763 5mac:A (2.6) BS02 MG 4.1.1.39 GO:0000287 ... Q12TQ0 28154188
    377764 5mac:A (2.6) BS03 MG 4.1.1.39 GO:0000287 ... Q12TQ0 28154188
    377765 5mac:A (2.6) BS04 MG 4.1.1.39 GO:0000287 ... Q12TQ0 28154188
    377766 5mac:B (2.6) BS01 CAP 4.1.1.39 GO:0000287 ... Q12TQ0 28154188
    377767 5mac:B (2.6) BS02 MG 4.1.1.39 GO:0000287 ... Q12TQ0 28154188
    377768 5mac:B (2.6) BS03 MG 4.1.1.39 GO:0000287 ... Q12TQ0 28154188
    377769 5mac:C (2.6) BS01 CAP 4.1.1.39 GO:0000287 ... Q12TQ0 28154188
    377770 5mac:C (2.6) BS02 MG 4.1.1.39 GO:0000287 ... Q12TQ0 28154188
    377771 5mac:C (2.6) BS03 MG 4.1.1.39 GO:0000287 ... Q12TQ0 28154188
    377772 5mac:C (2.6) BS04 MG 4.1.1.39 GO:0000287 ... Q12TQ0 28154188
    377773 5mac:D (2.6) BS01 MG 4.1.1.39 GO:0000287 ... Q12TQ0 28154188
    377774 5mac:D (2.6) BS02 CAP 4.1.1.39 GO:0000287 ... Q12TQ0 28154188
    377775 5mac:D (2.6) BS03 CAP 4.1.1.39 GO:0000287 ... Q12TQ0 28154188
    377776 5mac:D (2.6) BS04 MG 4.1.1.39 GO:0000287 ... Q12TQ0 28154188
    377777 5mac:D (2.6) BS05 MG 4.1.1.39 GO:0000287 ... Q12TQ0 28154188
    377778 5mac:E (2.6) BS01 CAP 4.1.1.39 GO:0000287 ... Q12TQ0 28154188
    377779 5mac:E (2.6) BS02 MG 4.1.1.39 GO:0000287 ... Q12TQ0 28154188
    377780 5mac:E (2.6) BS03 MG 4.1.1.39 GO:0000287 ... Q12TQ0 28154188
    377781 5mae:A (1.0) BS01 7KN 3.4.22.15 GO:0006508 ... P07711 27992115
    377782 5maf:A (2.8) BS01 XIN 2.7.10.2
    2.7.11.1
    GO:0004672 ... Q14680 29191878 BindingDB: Kd=4.9nM, Ki=5.6nM, IC50=43.0nM
    377783 5mag:A (2.35) BS01 7KC 2.7.10.2
    2.7.11.1
    GO:0004672 ... Q14680 29191878
    377784 5mah:A (2.0) BS01 7KD 2.7.10.2
    2.7.11.1
    GO:0004672 ... Q14680 29191878
    377785 5mai:A (2.15) BS01 5U5 2.7.10.2
    2.7.11.1
    GO:0004672 ... Q14680 29191878
    377786 5maj:A (1.0) BS01 7KH 3.4.22.15 GO:0006508 ... P07711 27992115
    377787 5mam:P (2.2) BS01 peptide ? GO:0005179 ... P01308 28348075
    377788 5mam:P (2.2) BS02 peptide ? GO:0005179 ... P01308 28348075
    377789 5mam:P (2.2) BS03 peptide ? GO:0005179 ... P01308 28348075
    377790 5man:B (2.04) BS01 GLC 2.4.1.7 GO:0004645 ... A0ZZH6 29057405
    377791 5map:A (1.49) BS01 HEM N/A GO:0004601 ... N/A 28512573
    377792 5map:A (1.49) BS02 OXY N/A GO:0004601 ... N/A 28512573
    377793 5map:B (1.49) BS01 HEM N/A GO:0004601 ... N/A 28512573
    377794 5maq:A (2.46) BS01 ADP 2.7.4.- GO:0006797 ... M9XB82 29531036
    377795 5maq:B (2.46) BS01 ADP 2.7.4.- GO:0006797 ... M9XB82 29531036
    377796 5maq:C (2.46) BS01 ADP 2.7.4.- GO:0006797 ... M9XB82 29531036
    377797 5maq:D (2.46) BS01 ADP 2.7.4.- GO:0006797 ... M9XB82 29531036
    377798 5mar:A (1.89) BS01 ZN 2.3.1.-
    2.3.1.286
    GO:0017136 ... Q8IXJ6 28240897
    377799 5mar:A (1.89) BS02 AR6 2.3.1.-
    2.3.1.286
    GO:0017136 ... Q8IXJ6 28240897
    377800 5mar:A (1.89) BS03 7KE 2.3.1.-
    2.3.1.286
    GO:0017136 ... Q8IXJ6 28240897 MOAD: ic50=41.2uM
    BindingDB: IC50=41200nM

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).